View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17765_low_10 (Length: 318)
Name: NF17765_low_10
Description: NF17765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17765_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 15 - 300
Target Start/End: Original strand, 31177232 - 31177517
Alignment:
| Q |
15 |
tttgatctcgctctatagagactagccactagccactctcattgcatgaatccaaaggaactaattgtcccaagggtttctgttaatctagtgaaaatta |
114 |
Q |
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| T |
31177232 |
tttgagctcgctctatagagactagccactagccactctcattgcgtgaatccaaaggaattaattgtcccaagggtttctgttgatctagtgaaaatta |
31177331 |
T |
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| Q |
115 |
taatcataattttaagacaagccataatataacatgtttatcaatatcagggggttccttgaagtctgattaaatatatgttgctagatttgtgtttgta |
214 |
Q |
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| T |
31177332 |
taatcataattttaagacaagccataatataacatgtttatcaaaatcagggggttccttgaagtctgattaaatatatgttgctagatttgtgtttgta |
31177431 |
T |
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| Q |
215 |
tgcatcttcgttcatgtgtcttgtctgcattttactacgtgtctggtatatacatttgcattatgaatttctttcaaagtatgagt |
300 |
Q |
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| T |
31177432 |
tgcatcttcgttcatgtgtcatgtctgcattttactacgtgtctggtatataaatttgcattatgaatttctttcaaagtatgagt |
31177517 |
T |
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