View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17765_low_15 (Length: 251)

Name: NF17765_low_15
Description: NF17765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17765_low_15
NF17765_low_15
[»] chr5 (58 HSPs)
chr5 (11-243)||(14980006-14980237)
chr5 (11-192)||(43257815-43257998)
chr5 (11-199)||(166604-166803)
chr5 (11-243)||(36660382-36660623)
chr5 (11-199)||(31889741-31889917)
chr5 (14-199)||(4011618-4011790)
chr5 (11-111)||(4967446-4967546)
chr5 (11-199)||(31557295-31557489)
chr5 (11-199)||(34919752-34919933)
chr5 (14-199)||(7388150-7388335)
chr5 (11-143)||(12167565-12167700)
chr5 (11-192)||(36783361-36783553)
chr5 (10-196)||(16886087-16886268)
chr5 (11-192)||(15400177-15400370)
chr5 (68-199)||(42329556-42329700)
chr5 (11-199)||(4751485-4751685)
chr5 (27-199)||(39059805-39059987)
chr5 (131-244)||(793692-793805)
chr5 (28-240)||(33693698-33693911)
chr5 (11-199)||(4742221-4742421)
chr5 (131-244)||(29653600-29653713)
chr5 (39-199)||(27810345-27810517)
chr5 (131-199)||(13066712-13066780)
chr5 (131-199)||(4371362-4371430)
chr5 (131-199)||(38982231-38982299)
chr5 (68-199)||(34171163-34171304)
chr5 (11-121)||(27652274-27652384)
chr5 (134-199)||(33585064-33585129)
chr5 (131-199)||(4833719-4833787)
chr5 (131-243)||(17674163-17674275)
chr5 (68-195)||(33822513-33822653)
chr5 (32-121)||(8961011-8961099)
chr5 (131-199)||(12992063-12992129)
chr5 (135-196)||(32690821-32690882)
chr5 (131-236)||(32963095-32963197)
chr5 (132-199)||(33741464-33741531)
chr5 (137-196)||(41845374-41845433)
chr5 (11-113)||(1513075-1513177)
chr5 (131-192)||(28640088-28640149)
chr5 (155-199)||(27658682-27658726)
chr5 (68-113)||(793616-793661)
chr5 (136-199)||(36296225-36296286)
chr5 (149-199)||(7731697-7731747)
chr5 (14-68)||(24436498-24436552)
chr5 (47-121)||(33584964-33585038)
chr5 (151-196)||(8961117-8961162)
chr5 (69-118)||(29044811-29044860)
chr5 (68-120)||(36296144-36296196)
chr5 (156-199)||(12167693-12167736)
chr5 (152-199)||(28316712-28316759)
chr5 (153-192)||(29051620-29051659)
chr5 (170-200)||(24436585-24436615)
chr5 (79-113)||(38982168-38982202)
chr5 (11-68)||(4371491-4371548)
chr5 (7-80)||(17674329-17674402)
chr5 (28-88)||(8755591-8755651)
chr5 (70-106)||(29653526-29653562)
chr5 (79-115)||(41566878-41566914)
[»] chr3 (74 HSPs)
chr3 (11-234)||(26965463-26965688)
chr3 (11-198)||(27483148-27483337)
chr3 (14-199)||(2567970-2568157)
chr3 (11-200)||(19552538-19552730)
chr3 (14-199)||(37225553-37225749)
chr3 (11-200)||(34059874-34060063)
chr3 (11-243)||(647547-647789)
chr3 (11-236)||(790058-790270)
chr3 (11-199)||(25061703-25061891)
chr3 (11-200)||(36771531-36771722)
chr3 (14-192)||(1340887-1341067)
chr3 (11-199)||(44648365-44648555)
chr3 (16-191)||(40048900-40049067)
chr3 (11-199)||(46362965-46363165)
chr3 (11-198)||(38457460-38457658)
chr3 (16-198)||(53716029-53716196)
chr3 (11-243)||(43580430-43580677)
chr3 (11-199)||(83295-83493)
chr3 (11-192)||(31290929-31291111)
chr3 (14-194)||(35239390-35239556)
chr3 (14-199)||(44854314-44854508)
chr3 (47-199)||(54933194-54933359)
chr3 (10-121)||(2662446-2662557)
chr3 (12-107)||(38165617-38165712)
chr3 (28-240)||(42740190-42740403)
chr3 (81-200)||(43599855-43599976)
chr3 (131-199)||(2988696-2988763)
chr3 (134-243)||(43169289-43169398)
chr3 (68-196)||(44645340-44645481)
chr3 (47-243)||(25722450-25722659)
chr3 (32-192)||(41287082-41287255)
chr3 (11-121)||(5244673-5244782)
chr3 (28-178)||(9167661-9167810)
chr3 (16-192)||(45095559-45095723)
chr3 (131-200)||(32303991-32304060)
chr3 (11-199)||(54261414-54261615)
chr3 (149-243)||(13485909-13486003)
chr3 (11-199)||(20512449-20512651)
chr3 (134-199)||(22730924-22730989)
chr3 (47-199)||(43687872-43688040)
chr3 (28-109)||(43736842-43736922)
chr3 (11-199)||(27027732-27027933)
chr3 (11-121)||(27039415-27039524)
chr3 (68-199)||(51381720-51381867)
chr3 (28-192)||(4476334-4476498)
chr3 (132-197)||(35099453-35099518)
chr3 (134-199)||(36310339-36310404)
chr3 (68-121)||(53560754-53560807)
chr3 (16-200)||(4391902-4392088)
chr3 (14-196)||(22414757-22414948)
chr3 (18-196)||(43600152-43600341)
chr3 (79-199)||(3000751-3000883)
chr3 (131-196)||(36541493-36541558)
chr3 (134-198)||(42857148-42857212)
chr3 (131-194)||(52222831-52222892)
chr3 (14-101)||(22731040-22731126)
chr3 (136-199)||(49470788-49470851)
chr3 (149-191)||(15514830-15514872)
chr3 (137-186)||(38165733-38165783)
chr3 (137-199)||(52202383-52202445)
chr3 (68-113)||(2988620-2988665)
chr3 (68-121)||(43169424-43169477)
chr3 (136-246)||(53560617-53560726)
chr3 (135-199)||(50420258-50420321)
chr3 (131-200)||(5244584-5244652)
chr3 (68-113)||(42007072-42007117)
chr3 (137-196)||(42791330-42791388)
chr3 (28-79)||(43599520-43599571)
chr3 (79-113)||(16240672-16240706)
chr3 (83-116)||(15514752-15514785)
chr3 (68-113)||(32303915-32303960)
chr3 (68-121)||(36541581-36541634)
chr3 (11-67)||(42857046-42857102)
chr3 (211-243)||(47895253-47895285)
[»] chr4 (68 HSPs)
chr4 (14-241)||(52732552-52732782)
chr4 (11-200)||(43421082-43421273)
chr4 (13-175)||(34360033-34360197)
chr4 (28-199)||(15501129-15501302)
chr4 (11-243)||(21045108-21045327)
chr4 (16-238)||(51930556-51930765)
chr4 (11-199)||(32140944-32141119)
chr4 (11-192)||(54512034-54512217)
chr4 (11-199)||(44855237-44855438)
chr4 (18-237)||(50072238-50072438)
chr4 (11-243)||(31817157-31817375)
chr4 (11-199)||(36805408-36805600)
chr4 (14-236)||(45520419-45520651)
chr4 (28-199)||(37445655-37445837)
chr4 (16-199)||(19849079-19849273)
chr4 (15-199)||(39671068-39671238)
chr4 (11-110)||(56422957-56423056)
chr4 (47-199)||(24259606-24259771)
chr4 (14-200)||(30022062-30022258)
chr4 (11-199)||(22212336-22212535)
chr4 (68-199)||(31941553-31941697)
chr4 (11-121)||(34096100-34096210)
chr4 (130-199)||(6462004-6462073)
chr4 (11-199)||(56556237-56556410)
chr4 (79-192)||(31987306-31987430)
chr4 (132-196)||(28116243-28116307)
chr4 (131-243)||(29840026-29840139)
chr4 (44-199)||(35928486-35928650)
chr4 (11-243)||(34124246-34124491)
chr4 (134-199)||(19282501-19282567)
chr4 (11-113)||(42672481-42672583)
chr4 (11-200)||(47321138-47321341)
chr4 (70-199)||(17499732-17499874)
chr4 (131-237)||(51434346-51434452)
chr4 (14-196)||(45903377-45903559)
chr4 (14-196)||(11835105-11835295)
chr4 (131-190)||(30492732-30492791)
chr4 (68-199)||(45889559-45889702)
chr4 (69-121)||(54233902-54233954)
chr4 (14-121)||(3093433-3093539)
chr4 (78-199)||(32141163-32141280)
chr4 (131-200)||(6510112-6510181)
chr4 (149-198)||(17317950-17317999)
chr4 (79-200)||(38692408-38692516)
chr4 (152-199)||(1868208-1868255)
chr4 (149-200)||(6232141-6232192)
chr4 (47-121)||(4408169-4408243)
chr4 (15-125)||(38761788-38761898)
chr4 (11-100)||(51737280-51737367)
chr4 (17-121)||(29289852-29289959)
chr4 (131-187)||(44835341-44835398)
chr4 (139-196)||(54233844-54233900)
chr4 (131-199)||(54091953-54092021)
chr4 (149-199)||(6231652-6231702)
chr4 (134-192)||(29289982-29290040)
chr4 (150-199)||(4408286-4408335)
chr4 (131-199)||(34096010-34096079)
chr4 (68-113)||(51434270-51434315)
chr4 (132-197)||(55126494-55126559)
chr4 (131-199)||(55548313-55548380)
chr4 (68-119)||(6462102-6462153)
chr4 (11-106)||(30492828-30492914)
chr4 (68-118)||(28116334-28116384)
chr4 (74-119)||(34534111-34534157)
chr4 (11-92)||(17317805-17317886)
chr4 (68-113)||(55126591-55126636)
chr4 (11-67)||(29840193-29840249)
chr4 (208-244)||(51434169-51434205)
[»] chr2 (45 HSPs)
chr2 (13-236)||(29795156-29795381)
chr2 (11-176)||(40410473-40410640)
chr2 (11-192)||(40987237-40987418)
chr2 (11-199)||(4840682-4840881)
chr2 (31-199)||(1381748-1381916)
chr2 (11-197)||(7743401-7743598)
chr2 (14-196)||(1298738-1298931)
chr2 (28-198)||(4766184-4766341)
chr2 (28-250)||(4536521-4536742)
chr2 (27-192)||(14378219-14378371)
chr2 (28-194)||(36360347-36360522)
chr2 (14-199)||(34225771-34225944)
chr2 (17-121)||(43460860-43460961)
chr2 (11-243)||(43388612-43388855)
chr2 (11-200)||(24775186-24775386)
chr2 (131-243)||(33093322-33093434)
chr2 (54-196)||(16316710-16316863)
chr2 (28-232)||(42969864-42970069)
chr2 (11-173)||(37106886-37107061)
chr2 (131-243)||(10580944-10581055)
chr2 (11-199)||(14698010-14698187)
chr2 (28-199)||(43344195-43344375)
chr2 (131-199)||(1360175-1360243)
chr2 (131-199)||(2459771-2459839)
chr2 (131-199)||(18374850-18374918)
chr2 (68-199)||(41984416-41984561)
chr2 (131-199)||(775972-776039)
chr2 (131-243)||(25332525-25332636)
chr2 (10-112)||(11171839-11171941)
chr2 (134-192)||(39866762-39866820)
chr2 (131-198)||(14511459-14511526)
chr2 (148-199)||(45148055-45148106)
chr2 (47-113)||(775875-775941)
chr2 (47-121)||(4566112-4566186)
chr2 (149-199)||(6591963-6592013)
chr2 (155-238)||(19505936-19506018)
chr2 (15-65)||(44228609-44228659)
chr2 (68-121)||(2459862-2459915)
chr2 (68-113)||(25332667-25332712)
chr2 (158-199)||(45372645-45372686)
chr2 (131-178)||(43460792-43460839)
chr2 (79-113)||(1360272-1360306)
chr2 (136-185)||(4566214-4566263)
chr2 (69-113)||(10580869-10580913)
chr2 (68-120)||(33093458-33093510)
[»] chr1 (63 HSPs)
chr1 (11-199)||(48259818-48260008)
chr1 (11-196)||(40060861-40061048)
chr1 (12-199)||(11650056-11650254)
chr1 (11-243)||(84473-84692)
chr1 (15-199)||(24040983-24041155)
chr1 (14-237)||(5317535-5317769)
chr1 (11-198)||(1430491-1430666)
chr1 (11-199)||(43929683-43929881)
chr1 (12-121)||(52403563-52403672)
chr1 (69-238)||(44582791-44582973)
chr1 (16-198)||(1428865-1429059)
chr1 (11-236)||(28751363-28751600)
chr1 (11-244)||(50349812-50350057)
chr1 (11-199)||(12002244-12002443)
chr1 (28-196)||(17919793-17919971)
chr1 (11-198)||(37437358-37437549)
chr1 (11-154)||(30006182-30006327)
chr1 (11-188)||(10690910-10691074)
chr1 (11-243)||(2458962-2459203)
chr1 (11-124)||(6332251-6332364)
chr1 (68-199)||(38132202-38132322)
chr1 (16-113)||(43105562-43105659)
chr1 (68-199)||(26252116-26252260)
chr1 (54-199)||(22664937-22665091)
chr1 (71-199)||(254926-255068)
chr1 (11-200)||(44583769-44583968)
chr1 (131-199)||(12851739-12851807)
chr1 (73-237)||(17806392-17806567)
chr1 (11-199)||(15698705-15698905)
chr1 (131-196)||(45377236-45377301)
chr1 (49-234)||(43755016-43755187)
chr1 (27-111)||(45749470-45749554)
chr1 (36-199)||(48319981-48320144)
chr1 (131-243)||(44024499-44024611)
chr1 (14-192)||(2245791-2245982)
chr1 (47-196)||(49894807-49894943)
chr1 (14-196)||(50158276-50158458)
chr1 (28-192)||(40719020-40719195)
chr1 (70-200)||(5854238-5854381)
chr1 (137-199)||(26582923-26582985)
chr1 (131-199)||(28200310-28200379)
chr1 (69-121)||(9552368-9552420)
chr1 (151-199)||(9552436-9552484)
chr1 (132-199)||(15647150-15647215)
chr1 (135-199)||(43738344-43738408)
chr1 (131-198)||(11134548-11134614)
chr1 (134-197)||(42650339-42650402)
chr1 (68-121)||(42650261-42650314)
chr1 (131-191)||(52403482-52403542)
chr1 (75-121)||(672300-672346)
chr1 (175-238)||(672397-672460)
chr1 (71-113)||(35149394-35149436)
chr1 (149-199)||(35149485-35149535)
chr1 (137-194)||(50591388-50591446)
chr1 (135-199)||(6332164-6332229)
chr1 (68-113)||(28200234-28200279)
chr1 (16-113)||(43738214-43738311)
chr1 (137-199)||(9333105-9333168)
chr1 (137-199)||(9356878-9356941)
chr1 (156-236)||(43105692-43105772)
chr1 (79-113)||(12851836-12851870)
chr1 (176-243)||(50249264-50249331)
chr1 (47-119)||(50591309-50591381)
[»] chr7 (52 HSPs)
chr7 (16-199)||(28044101-28044286)
chr7 (12-200)||(36447567-36447757)
chr7 (11-200)||(18886667-18886843)
chr7 (11-248)||(42121500-42121740)
chr7 (11-243)||(17869192-17869435)
chr7 (11-199)||(32275203-32275393)
chr7 (11-200)||(41905890-41906089)
chr7 (15-193)||(22627313-22627495)
chr7 (11-189)||(34002087-34002277)
chr7 (45-243)||(40207379-40207576)
chr7 (11-199)||(3680878-3681077)
chr7 (14-200)||(33056242-33056433)
chr7 (12-200)||(1103482-1103681)
chr7 (11-243)||(40298802-40299036)
chr7 (18-124)||(34733394-34733500)
chr7 (28-199)||(42259521-42259702)
chr7 (131-243)||(43813431-43813543)
chr7 (47-199)||(26963478-26963643)
chr7 (131-237)||(22597191-22597297)
chr7 (11-200)||(32345789-32345991)
chr7 (68-199)||(19906413-19906555)
chr7 (14-192)||(26527356-26527544)
chr7 (134-199)||(30514972-30515037)
chr7 (134-239)||(36836018-36836123)
chr7 (131-243)||(42044066-42044178)
chr7 (131-196)||(19288434-19288499)
chr7 (131-199)||(31416838-31416906)
chr7 (149-236)||(18733415-18733502)
chr7 (131-192)||(19920358-19920419)
chr7 (34-113)||(42010553-42010632)
chr7 (70-199)||(36447083-36447225)
chr7 (47-194)||(39117479-39117638)
chr7 (131-195)||(5723006-5723069)
chr7 (132-200)||(10684918-10684986)
chr7 (11-121)||(48838635-48838750)
chr7 (47-121)||(10684820-10684894)
chr7 (137-243)||(29001634-29001740)
chr7 (149-200)||(32873268-32873319)
chr7 (27-192)||(30833066-30833241)
chr7 (68-121)||(6521907-6521960)
chr7 (68-121)||(19277057-19277110)
chr7 (47-120)||(47272240-47272313)
chr7 (69-121)||(31416763-31416815)
chr7 (28-124)||(33845391-33845478)
chr7 (149-246)||(40804977-40805073)
chr7 (70-121)||(36836148-36836199)
chr7 (81-124)||(18733540-18733583)
chr7 (161-200)||(42753705-42753744)
chr7 (83-121)||(5723090-5723128)
chr7 (69-123)||(29001577-29001631)
chr7 (135-192)||(47271731-47271789)
chr7 (17-58)||(32873127-32873168)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-192)||(12040-12219)
[»] chr8 (59 HSPs)
chr8 (11-243)||(7612452-7612694)
chr8 (70-236)||(1774085-1774251)
chr8 (28-243)||(22601090-22601315)
chr8 (11-200)||(45187251-45187440)
chr8 (39-199)||(29931224-29931386)
chr8 (11-200)||(27109775-27109976)
chr8 (11-244)||(9022348-9022593)
chr8 (11-236)||(38329010-38329221)
chr8 (47-196)||(16208951-16209102)
chr8 (12-199)||(36915365-36915561)
chr8 (28-198)||(30788934-30789115)
chr8 (11-199)||(6839215-6839404)
chr8 (68-194)||(34168224-34168355)
chr8 (14-120)||(2067788-2067894)
chr8 (14-236)||(7129262-7129476)
chr8 (11-194)||(32326680-32326875)
chr8 (45-196)||(18666534-18666672)
chr8 (68-199)||(8471279-8471399)
chr8 (47-199)||(14541737-14541900)
chr8 (11-121)||(11335994-11336098)
chr8 (28-240)||(41414799-41415012)
chr8 (79-199)||(156239-156358)
chr8 (12-115)||(32737859-32737961)
chr8 (78-200)||(2803268-2803393)
chr8 (131-197)||(34461670-34461737)
chr8 (12-77)||(24732079-24732144)
chr8 (28-195)||(41790113-41790268)
chr8 (70-192)||(26438980-26439102)
chr8 (131-197)||(3095590-3095656)
chr8 (134-199)||(5588563-5588628)
chr8 (11-199)||(11257540-11257736)
chr8 (134-227)||(33870724-33870817)
chr8 (131-196)||(27416502-27416565)
chr8 (131-192)||(8382564-8382625)
chr8 (131-199)||(39970323-39970390)
chr8 (78-189)||(8107191-8107304)
chr8 (137-199)||(35052469-35052531)
chr8 (131-192)||(32661310-32661371)
chr8 (136-233)||(32061515-32061612)
chr8 (131-199)||(42946120-42946188)
chr8 (14-101)||(5588426-5588512)
chr8 (134-192)||(18673189-18673247)
chr8 (16-69)||(2812915-2812968)
chr8 (139-196)||(13108989-13109045)
chr8 (68-118)||(27416593-27416643)
chr8 (15-113)||(42709949-42710046)
chr8 (149-190)||(2812817-2812858)
chr8 (68-121)||(13109076-13109129)
chr8 (28-121)||(39970412-39970496)
chr8 (47-119)||(5044218-5044290)
chr8 (69-121)||(34461595-34461647)
chr8 (156-199)||(3203325-3203368)
chr8 (78-121)||(35052560-35052603)
chr8 (149-192)||(43938125-43938168)
chr8 (149-195)||(2067725-2067770)
chr8 (170-200)||(11335839-11335869)
chr8 (11-65)||(32061414-32061468)
chr8 (11-68)||(3095468-3095525)
chr8 (211-243)||(11165482-11165514)
[»] chr6 (30 HSPs)
chr6 (16-243)||(1924634-1924862)
chr6 (28-199)||(12828653-12828835)
chr6 (14-194)||(26669056-26669247)
chr6 (11-199)||(29915539-29915740)
chr6 (11-199)||(29927205-29927405)
chr6 (11-199)||(31275596-31275796)
chr6 (11-198)||(23936538-23936735)
chr6 (11-243)||(32258676-32258910)
chr6 (16-239)||(34439368-34439607)
chr6 (131-199)||(4123941-4124009)
chr6 (131-199)||(11785189-11785255)
chr6 (68-199)||(17345146-17345290)
chr6 (134-199)||(6143082-6143147)
chr6 (131-199)||(4132061-4132129)
chr6 (131-236)||(26189469-26189574)
chr6 (131-199)||(34576542-34576610)
chr6 (134-199)||(6140598-6140662)
chr6 (55-199)||(10494760-10494916)
chr6 (131-200)||(30627088-30627157)
chr6 (131-226)||(8052316-8052410)
chr6 (149-194)||(3015919-3015964)
chr6 (148-199)||(30626867-30626918)
chr6 (70-121)||(34576633-34576684)
chr6 (11-119)||(4131903-4132008)
chr6 (136-200)||(19689927-19689989)
chr6 (68-103)||(6992508-6992543)
chr6 (68-118)||(26189600-26189651)
chr6 (169-199)||(19416857-19416887)
chr6 (18-67)||(19689809-19689858)
chr6 (68-121)||(25932718-25932771)
[»] scaffold0119 (1 HSPs)
scaffold0119 (14-194)||(1546-1737)
[»] scaffold0580 (4 HSPs)
scaffold0580 (14-93)||(1689-1768)
scaffold0580 (14-93)||(9428-9507)
scaffold0580 (149-243)||(1595-1691)
scaffold0580 (149-243)||(9334-9430)
[»] scaffold0047 (1 HSPs)
scaffold0047 (68-199)||(70465-70609)
[»] scaffold0886 (1 HSPs)
scaffold0886 (11-199)||(4063-4263)
[»] scaffold0238 (1 HSPs)
scaffold0238 (11-192)||(15995-16186)
[»] scaffold0189 (2 HSPs)
scaffold0189 (131-236)||(13145-13250)
scaffold0189 (11-113)||(13023-13116)
[»] scaffold0003 (2 HSPs)
scaffold0003 (131-199)||(321724-321792)
scaffold0003 (68-121)||(321815-321868)
[»] scaffold0194 (1 HSPs)
scaffold0194 (11-199)||(8156-8346)
[»] scaffold0007 (1 HSPs)
scaffold0007 (79-121)||(158187-158229)
[»] scaffold0519 (1 HSPs)
scaffold0519 (136-199)||(7791-7852)
[»] scaffold0060 (1 HSPs)
scaffold0060 (155-199)||(31623-31667)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 14980006 - 14980237
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980006 cacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 14980105  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggt 210  Q
    ||| || || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |     
T  14980106 attgtgaga-aaaagttggagagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatttttttagc 14980204  T
Q  211 taaagtgacactcattttaaaacggaggaagta 243  Q
    ||||||||| |||||||| ||||||||| ||||    
T  14980205 taaagtgactctcattttgaaacggagggagta 14980237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 43257815 - 43257998
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||  |||  ||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  43257815 cacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgcccttactttataagaaatagacaaacttaaagttgcattgaaa 43257914  T
Q  111 attatgtgagaaa--agatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| |||||||||  || ||  |||| |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  43257915 attgtgtgagaaaacagttgaagaggataaagttgaaagaaaaaaattaaagttatattggaaatgtaaagtgacattcatttt 43257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 166604 - 166803
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||||||   ||||| |||||||||||| |||||||||||||||||    
T  166604 cacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgtattatatgaaaaagacaaacttaaagttgcattgaaa 166703  T
Q  111 attatgtgag--aaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||||  ||||| |||          ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  166704 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 166803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 36660623 - 36660382
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||| ||  |||    
T  36660623 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgtataaaaa 36660524  T
Q  111 attatgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaan 201  Q
    ||| || |||||||| ||| |         |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||      
T  36660523 attgtgagagaaaagctggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatt 36660424  T
Q  202 nnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
          || |||||||||||||||||| ||||| ||| ||||    
T  36660423 ttttttggctaaagtgacactcattttgaaacgaagggagta 36660382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 31889917 - 31889741
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||||||||||| |||| |||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31889917 cacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 31889818  T
Q  111 attatgtgagaaaagatggggagggtaaagttgg-aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||             | |||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31889817 attgtgtgaga-------------gaaaagttggaaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaacaa 31889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 4011618 - 4011790
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| |||| ||||||||||||||||||||  |||| | ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4011618 agattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattgaaaatt 4011717  T
Q  114 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     |||||||||             ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  4011718 gtgtgagaaa-------------aaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaacaa 4011790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 4967446 - 4967546
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4967446 cacagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaa 4967545  T
Q  111 a 111  Q
    |    
T  4967546 a 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 31557295 - 31557489
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| ||||||||||||||||  |||||| |||||||  ||||  ||||| ||||||||||||||||||||| ||||||||||||||||    
T  31557295 cacatattaagaaatagaatgaaataatcattaaatataatacttttagtaaacaaccctttactttataagaaaaagacaaacttaaagttgcattgaa 31557394  T
Q  110 aattatgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| ||||||| || |     |   ||   |||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31557395 aattgtgtgagagaatagtatttattgaaaataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 31557489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 34919933 - 34919752
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| |||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||| |||       ||| | |    
T  34919933 cacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttataagaaaaagacaaactta-------attaata 34919841  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| || |||||||| || |||| || |||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||    
T  34919840 attgtgagagaaaagttgaggagagtcaagttggaagaaaaaaattaaagttatattaggaatgtaaagtgacattcattttgaaacaa 34919752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 7388150 - 7388335
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||| ||||  ||| ||||||||||| || |||| | |||||| ||| || ||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  7388150 agattaataaatgaaataaaataatcattagacataatatttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaatt 7388249  T
Q  114 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     || |||||||| ||  |||| ||||| ||||||  |||||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  7388250 gtgagagaaaagttgaagaggataaagatggaagataaaaattaaaattgtattgaaaatataaagtgacattcattttaaaacaa 7388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 12167565 - 12167700
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  12167565 cacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttactttataagaaaaggtcaaacttaaagttgcattgaaa 12167664  T
Q  111 at---tatgtgagaaaagatggggagggtaaagttg 143  Q
    ||   | || |||||||| ||| |||||||||||||    
T  12167665 atttgtgtgagagaaaagttggagagggtaaagttg 12167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 36783553 - 36783361
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||| ||  ||||||||||||||| || |||||| |||||| ||| |||||||||||  || |||||||||||| |||||||||||||||||    
T  36783553 cacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttacttgttatgaaaaagacaaatttaaagttgcattgaaa 36783454  T
Q  111 attatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| |||  |||||||| ||| |         ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  36783453 attgtgtgagagaaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagttgtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 16886268 - 16886087
Alignment:
Q  10 gcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||| ||| |||  ||||||||||| ||| ||  |||||| ||||| |||||||||||||||||||| ||||        ||||||||||||||||    
T  16886268 gcacagatcaaggaatgaaatgaaataattattagacgtaacacatttactaaactgcccttactttataacaaaac-------ttaaagttgcattgaa 16886176  T
Q  110 aattatgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||| |||||  |||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||||||||||    
T  16886175 aattgtgtgatagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaagcgacgttcattttgaaa 16886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 15400370 - 15400177
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||| ||| | ||| ||||||||||||||||||  ||| |||||||| ||||| |    
T  15400370 cacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttactttataagaaaaaggaaaacttaaagtttcattgga 15400271  T
Q  110 aat--tatgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||  |||| |||||||| | |          |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15400270 aattgtatgagagaaaagtttgagtatttattgaggataaagttggaagaagaaaattaaagttgtattggaaatgtaaagtgacattcatttt 15400177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 42329556 - 42329700
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||    |||| ||  |         |||||||||||||||| ||||||    
T  42329556 ccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaagaaaaaaa 42329655  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42329656 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 42329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 4751485 - 4751685
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||||  |||||  |||||| |||||| ||||| ||||||||| |||||||    
T  4751485 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaa 4751584  T
Q  111 attatgtgag--aaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||| ||||||  ||||| |||          |||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  4751585 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaaca 4751684  T
Q  199 a 199  Q
    |    
T  4751685 a 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 39059987 - 39059805
Alignment:
Q  27 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 126  Q
    |||||||||||||||| || ||||||||||||| ||||| |||||  |||||| |||||| ||||| |||||||||||||||||||| | |||||||| |    
T  39059987 gaatgaaataatcattagacataacacttttactaaactacccttgttttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaa 39059888  T
Q  127 tggg-----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |  |           |||||||||||| ||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  39059887 tttggagtatttattgagggtaaagttagaa-gaaaaaattaaagttgtattgaaaatgtaaagcaacattcattttgaaacaa 39059805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 793692 - 793805
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||| |||||||||||| |    
T  793692 gagggtagagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatttttttggctaaagcgacactcattttga 793791  T
Q  231 aacggaggaagtag 244  Q
    || ||| |||||||    
T  793792 aatggaagaagtag 793805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 33693911 - 33693698
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 126  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||| |||||||||| |     
T  33693911 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 33693813  T
Q  127 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcat 225  Q
     || ||| |||||| ||||||| |||||||||||||  ||||  ||||||||||||||||| ||||| ||| |||       || ||||| |||||| ||    
T  33693812 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatgtaaagtgacatttattttaaaataaatatttttggctaaagagacacttat 33693713  T
Q  226 tttaaaacggaggaa 240  Q
    ||||||| |||||||    
T  33693712 tttaaaatggaggaa 33693698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 4742221 - 4742421
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||  || ||||||||||||| ||||  |||||  |||||| |||||| ||||| ||||||||| |||||||    
T  4742221 cacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgttttatatgaaaaaaacaaacttaaagttgaattgaaa 4742320  T
Q  111 attatgtgagaaaaga--tgggg---------agggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||| |||||||||| |  ||| |         |||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  4742321 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattagaaatataaagtgacattcattttgaaaca 4742420  T
Q  199 a 199  Q
    |    
T  4742421 a 4742421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 29653600 - 29653713
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||         ||||||  ||||||||||||||    
T  29653600 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgcaacaatttttttttgttaaaacgacactcattttaa 29653699  T
Q  231 aacggaggaagtag 244  Q
    |||||||| |||||    
T  29653700 aacggagggagtag 29653713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 27810517 - 27810345
Alignment:
Q  39 cattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaattatgtgagaaaaga---tggg---- 130  Q
    ||||| ||||||||||||||| |||||||| ||  |||||| |||||| || ||| ||||||||| |||||||||| |||||||||| |   || |        
T  27810517 cattgcatataacacttttactaaactgccattgttttatatgaaaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatt 27810418  T
Q  131 ----gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
        |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27810417 tattgaggataaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 27810345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 13066780 - 13066712
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13066780 gagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaa 13066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 4371430 - 4371362
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4371430 gagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgacgttcattttgaaacaa 4371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 38982231 - 38982299
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  38982231 gagggtaaagttgggagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaa 38982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 34171304 - 34171163
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||||| || |   || |        || |||||||||||||  ||||||||    
T  34171304 ccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagttggaaa-aaaaaatt 34171206  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  34171205 aaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 34171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 27652274 - 27652384
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||| ||||| |||   |  |||||| |||||| ||| |  ||||||||||||||||||||||||| |||||||||||||||||    
T  27652274 cacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaagacaaatttaaagttgcattgaaa 27652373  T
Q  111 attatgtgaga 121  Q
    ||| |||||||    
T  27652374 attgtgtgaga 27652384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 33585064 - 33585129
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  33585064 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaacaa 33585129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 4833719 - 4833787
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||||||  ||||||||||||||||||    
T  4833719 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcaacattcattttgaaacaa 4833787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 17674275 - 17674163
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    |||| ||||||| || | |||||||||||||| ||||| ||| ||||||||||||||||||||||||||        |  ||||||||||||||||||||    
T  17674275 gaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgacattcattttgaaacaattttatttgactaaagtgacactcattttaa 17674176  T
Q  231 aacggaggaagta 243  Q
    |||||||| ||||    
T  17674175 aacggagggagta 17674163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 33822513 - 33822653
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||||||    |||| ||  |         | |||||||||| ||| | ||||    
T  33822513 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttgaaagaacaaaa 33822612  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  33822613 ttaaagttgtattgaaaatgtaaagtgacattcattttgaa 33822653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 8961011 - 8961099
Alignment:
Q  32 aaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||| || ||||||||||||| |||||| | ||| ||||||||||||||| ||| ||||||||||| |||||||| |||||||    
T  8961011 aaataatcattagacataacacttttactaaactgtc-ttattttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgaga 8961099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12992129 - 12992063
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12992129 gaggataaagttggaa--aaaaaattaaagttgtattagaaatgtaaaatgacattcattttgaaacaa 12992063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 32690821 - 32690882
Alignment:
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||  || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32690821 gtaaagttgagagaaaaaaattaaagttgtatttgaaatgtaaagtgacattcattttgaaa 32690882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 32963095 - 32963197
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||||||||  |||||||||||||||||       |  ||||||||||||||||||||    
T  32963095 gagggtaaagtttgaa--aaaaaaataaagttgtattggaaatgtaaagtggtattcattttgaaacaaa-ctttttgactaaagtgacactcattttaa 32963191  T
Q  231 aacgga 236  Q
    ||||||    
T  32963192 aacgga 32963197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 33741531 - 33741464
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||| ||||||| ||||||| |||| |||||||||||||||||||| |||||||||    
T  33741531 agggtaaagtttgaagaaaaaaatgaaagttgcattgaaaatgtaaagtgacattcatattgaaacaa 33741464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 41845374 - 41845433
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  41845374 aaagttgaaagaaaaaaattaaaattgtattgaaaatgtaaagtgacattcattttgaaa 41845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 1513177 - 1513075
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  |||||||||||||||  | |||| ||||||  |||||| ||||||||||| |||| ||| ||||| |||||||||| ||||||    
T  1513177 cacaaattaagaaatgaaatgaaataatcattaaacataatacttttttcaaactacccttactttacaagagaaaaacaaacttaaagttgctttgaaa 1513078  T
Q  111 att 113  Q
    |||    
T  1513077 att 1513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 28640149 - 28640088
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| |||||    
T  28640149 gagggtaaagttgggagaaaaaaattaaagttgaattgaaaatgtaaagtgacatttatttt 28640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 27658682 - 27658726
Alignment:
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  27658682 ttaaagttatattggaaatgtaaagtgacattcattttgaaacaa 27658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 793616 - 793661
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  793616 ccttactttataagaacaagacaaacttaaagttgcattgaaaatt 793661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 36296225 - 36296286
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||  |||||||||||||||||||||||||| |||| || ||||||||| ||||||    
T  36296225 taaagttggaa--aaaaaattaaagttgtattggaaatggaaagcgatattcattttaaaacaa 36296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 7731697 - 7731747
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| ||||||    
T  7731697 aaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaacaa 7731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 24436498 - 24436552
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 68  Q
    |||||||| |||  ||||||||||||||| |||||||||||||||||||| ||||    
T  24436498 agattaaggaataaaatgaaataatcattagatataacacttttaccaaaatgcc 24436552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 33584964 - 33585038
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||| |||||| ||| |  |||||||||| | ||| |||||||| |||||||||||||||||||| |||||||    
T  33584964 ataacaattttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 33585038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 8961117 - 8961162
Alignment:
Q  151 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8961117 aaaattaaagttgcattggaattgtaaagtgacatccattttgaaa 8961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 29044860 - 29044811
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg 118  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||| ||||    
T  29044860 cttactttataagaataagataaacttaaagttgcattgaaaattgtgtg 29044811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 36296144 - 36296196
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag 120  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  36296144 ccttaatttataggaacaagacaaacttaaagttgcattgaaaattgtgtgag 36296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 12167693 - 12167736
Alignment:
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  12167693 taaagttgtattgaaaatgtagagtgacattcattttaaaacaa 12167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 28316759 - 28316712
Alignment:
Q  152 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |||| |||| ||||||| ||||||||||||    
T  28316759 aaattaaagttgtattgaaaatataaaatgacatttattttgaaacaa 28316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 192
Target Start/End: Original strand, 29051620 - 29051659
Alignment:
Q  153 aattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  29051620 aattaaagttgtattagaaaggtaaagtgacattcatttt 29051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 24436585 - 24436615
Alignment:
Q  170 aaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||||||||||||||||||    
T  24436585 aaatgtaaagtgacattcattttgaaacaaa 24436615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 38982168 - 38982202
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||| ||||||||||||||||||||    
T  38982168 aagaaaaagacaaacttaaagttgcattgaaaatt 38982202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 4371548 - 4371491
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 68  Q
    |||| |||||| ||| |||||||||||||||| || ||| ||||||||| ||||||||    
T  4371548 cacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaactgcc 4371491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 17674402 - 17674329
Alignment:
Q  7 ggagcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa 80  Q
    |||| ||| ||||| ||||  |||||||||||||||  | |||||| |||||  ||||||||||||||||||||    
T  17674402 ggagtacatattaaaaaatgaaatgaaataatcattaaacataacatttttattaaactgcccttactttataa 17674329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 8755591 - 8755651
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaaga 88  Q
    ||||||||||||||  || ||||||||||||  |||||| ||||  |||||||||||||||    
T  8755591 aatgaaataatcatcagacataacacttttattaaactgtcctttttttataagaaaaaga 8755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 29653526 - 29653562
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcatt 106  Q
    |||||||||||||| |||||||| |||||||||||||    
T  29653526 ttactttataagaacaagacaaacttaaagttgcatt 29653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 41566914 - 41566878
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  41566914 aagaaaatgacaaacttaaagttgcattgaaaattat 41566878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 26965463 - 26965688
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26965463 cacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 26965562  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnng 208  Q
    ||| |||  |||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||        |    
T  26965563 attgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaatattttttg 26965662  T
Q  209 gttaaagtgacactcattttaaaacg 234  Q
    | ||||||||||||||||||||||||    
T  26965663 gctaaagtgacactcattttaaaacg 26965688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 27483148 - 27483337
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  27483148 cacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttataagaaaaagacaaacttaaagttgcattgaaa 27483247  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||||||  |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27483248 attatgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 27483337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 2567970 - 2568157
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2567970 agattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 2568069  T
Q  114 atgtgagaaaaga--tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     ||||||| || |  | |  |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  2568070 gtgtgagagaaaaattagaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaacaa 2568157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 19552730 - 19552538
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacactttt-accaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| ||||||||||  ||||||||||||||||||||||||  |||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  19552730 cacaaattaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaa 19552631  T
Q  110 aattatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||| |||||||  |||| | | ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  19552630 aattctgtgagagaaaagttagagagggtaaagttggaagaaaaaatttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaaa 19552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 37225553 - 37225749
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37225553 agattaagaaatacaatgaaataatcattggatataatacttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 37225652  T
Q  114 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     |||  |||||||| | |          ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37225653 gtgtgagagaaaagttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 37225749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 34060063 - 34059874
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||||||||||| |||||||||||   |||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  34060063 cacagattaagaaatggaatgaaataataattggatataaagtttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattgaaa 34059966  T
Q  111 attatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||| || ||||  |||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  34059965 attgtgcgagagaaaagttggagagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaa 34059874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 647547 - 647789
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  647547 cacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaa 647646  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||| | |          ||||||||||||||||| |||||||||||||||||||| ||||||||| ||| | ||||||| ||||||    
T  647647 attctgtaagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaaatgata-tcatttttaaacaa 647745  T
Q  200 annnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |       ||||||||||||||||||||| ||||||||| ||||    
T  647746 atttttttggttaaagtgacactcattttgaaacggagggagta 647789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 790270 - 790058
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  790270 cacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaa 790171  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggt 210  Q
    ||| |||||||             | |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||       |||    
T  790170 attgtgtgaga-------------gaaaagtttgaagaaaaaaattaaagttgtattggaaatgtaaagtgacattaattttgaaacaaatttttttggt 790084  T
Q  211 taaagtgacactcattttaaaacgga 236  Q
    ||||| |||||||||||| |||||||    
T  790083 taaagggacactcattttgaaacgga 790058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 25061891 - 25061703
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||||||||    
T  25061891 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaa--caaacttaaagttgcattgaaa 25061794  T
Q  111 att--atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||  ||| |||||||| ||| ||| |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25061793 attgtatgagagaaaagttggagagagtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttaaaacaa 25061703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 36771531 - 36771722
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||||||||||| ||| || |||| | |||||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  36771531 cacatattaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattgaaa 36771630  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||| |||  |||||||| ||| |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36771631 attgtgtgagagaaaagttggagaggataaagttgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaacaaa 36771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 1340887 - 1341067
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||  ||| |||||||||||| ||| || ||||||||||| | ||| || | ||||||||||||||||||||||| ||||||||||||||||||||    
T  1340887 agattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaaacttaaagttgcattgaaaatt 1340986  T
Q  114 atgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
     |||  |||||||| ||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  1340987 gtgtgagagaaaagttggagagggtaacgttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 1341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 44648365 - 44648555
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag-aaaaagacaaaattaaagttgcattgaa 109  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||||| ||||||||| || ||||||||||| ||||||||| ||||||    
T  44648365 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgcctttactttatgagaaaaaagacaaacttaaagttgaattgaa 44648464  T
Q  110 aattatgtgag--aaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| ||||||  ||||| ||| ||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  44648465 aattgtgtgagaaaaaagttggagagagtaaagttggaa-aaaaaaaataaagttgtattggaaatgtaaagtgacattcattttaaaacaa 44648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 40049067 - 40048900
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    |||||| ||| |||||||||||||||| || ||||||||||||  ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40049067 attaaggaatggaatgaaataatcattagacataacacttttattaaattgcctttactttataagaaaaagacaaatttaaagttgcattgaaaattat 40048968  T
Q  116 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    | |||||||| ||| |||||||||| |||||| ||||||||||        |||||||||||||||||||||||||    
T  40048967 gagagaaaagttggagagggtaaagctggaagaaaaaaattaa--------tggaaatgtaaagtgacattcattt 40048900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 46362965 - 46363165
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||||||||||||||||||| ||  ||||| |||||| |||||| ||||||||||||||||||| ||||| |||||||||||||| ||    
T  46362965 cacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaa 46363064  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||| |||  |||||||| |||          |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46363065 attgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaaca 46363164  T
Q  199 a 199  Q
    |    
T  46363165 a 46363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 38457658 - 38457460
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||||||||||||||||||||  | ||||||||||||| |||||||| ||||||||| ||||||||| ||| ||||| |||||||||||    
T  38457658 cacaaattaagaaattgaatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaa 38457559  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||| |||  |||||||| |||          ||||||||||||||| | |||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  38457558 attgtgtgagagaaaagttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcattttgaaaca 38457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 53716196 - 53716029
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    ||||||||||  |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||| | |    
T  53716196 attaagaaatgaaatgaaataatcattggatataacgcttttactaaactgctcttactttataagaaaaagac--aattaaagttgcattgaaaactgt 53716099  T
Q  116 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||             | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  53716098 gtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaaca 53716029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 43580677 - 43580430
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataa--gaaaaagacaaaattaaagttgcattga 108  Q
    ||||||||||| ||| ||||||||||||||||  |||||||| |||||| |||||||||||  ||||||   |||||||||||| |||||||||||||||    
T  43580677 cacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatttaaagttgcattga 43580578  T
Q  109 aaattatgtgag---aaaagatgggg---------agggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    ||||| ||||||   ||||| ||| |         ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  43580577 aaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttgaa 43580478  T
Q  196 acaaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |||||       || ||||| ||| |||||||| ||||||||||||||    
T  43580477 acaaatttttttggctaaagcgacgctcattttgaaacggaggaagta 43580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 83493 - 83295
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  |||||| |||||||| || | ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  83493 cacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaa 83394  T
Q  111 att--atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||   || |||||||| | |          |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  83393 attgcgtgagagaaaagttagagtatttaatgagggtaaagttggaa-gaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttgaaacaa 83295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 31290929 - 31291111
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||| ||| || ||||||||||||| |||||||| ||| ||||| ||||||||| ||| ||||||||||| |||||    
T  31290929 cacagattaaggaatgaaatgaaataattattagacataacacttttactaaactgcctttattttattagaaaaaga-aaacttaaagttgcaatgaaa 31291027  T
Q  111 attatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| |||||||  |||| ||  |||  |||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  31291028 attgtgtgagagaaaagttgaagagcataaagttgaaagaaaaaaattaaagttgtattagaaatgtaaagtgatattcatttt 31291111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 35239556 - 35239390
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||| ||||||||| ||||||||||| |  |||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  35239556 agattaaaaaattgaataaaataatcattaggcataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaatt 35239457  T
Q  114 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
     |||||||             | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  35239456 gtgtgaga-------------gaaaagttggaa-gaaaaaattaaagttgtattagaaatgtaaagtgacattcattttga 35239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 44854508 - 44854314
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||  |||||||||||||||||||| || |  |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  44854508 agattaatgaattgaatgaaataatcattagaca--acacttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattgaaaatt 44854411  T
Q  114 ---atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
        || |||||||| |||          ||||||||| |||||| |||||| ||||| |||||||| |||||||||||||| |||||||||||||||    
T  44854410 gtactgagagaaaagttggagtatttattgagggtaaaattggaa-gaaaaagttaaaattgtattgaaaatgtaaagtgacgttcattttgaaacaa 44854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 54933194 - 54933359
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 133  Q
    |||||| |||||| ||| |  |||||||||||||||||| |||||| |||||||||||||||||||| |||||||    |||| ||| |         ||    
T  54933194 ataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 54933293  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54933294 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 54933359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 2662446 - 2662557
Alignment:
Q  10 gcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||||  |||  ||||||||||||||| || ||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  2662446 gcacagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaa 2662545  T
Q  110 aattatgtgaga 121  Q
    |||| |||||||    
T  2662546 aattgtgtgaga 2662557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 38165617 - 38165712
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattg 107  Q
    |||||||||| |||  |||||||||||||||  | ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  38165617 acagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 42740403 - 42740190
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 126  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||| |||||||||| |     
T  42740403 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 42740305  T
Q  127 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcat 225  Q
     || ||| |||||| ||||||| |||||||||||||  ||||  |||| |||||||||||| ||||| ||| |||       || ||||| |||||| ||    
T  42740304 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttattttaaaataaatatttttggctaaagagacacttat 42740205  T
Q  226 tttaaaacggaggaa 240  Q
    ||||||| |||||||    
T  42740204 tttaaaatggaggaa 42740190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 43599855 - 43599976
Alignment:
Q  81 gaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    |||||||||||| ||||||||||||| |||||| |||||||  |||| ||| ||||||||||||  ||| ||||||||||||||||||   |||||||||    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagttggagagggtaaagttaaaagaaaaaaattaaagttgtatgaaaaatgtaaa 43599954  T
Q  179 gtgacattcattttgaaacaaa 200  Q
      ||||||||||||||||||||    
T  43599955 acgacattcattttgaaacaaa 43599976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 2988696 - 2988763
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2988696 gagggtaaagttggaagaaaaaaattaaa-ttgtattggaaatgtaaagtgacattcattttgaaacaa 2988763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 243
Target Start/End: Complemental strand, 43169398 - 43169289
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaac 233  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||        |  ||||| |||||||||||||||||    
T  43169398 ggtaaagttagaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaattttttttgactaaagcgacactcattttaaaac 43169299  T
Q  234 ggaggaagta 243  Q
    ||||| ||||    
T  43169298 ggagggagta 43169289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 44645481 - 44645340
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt----gagaaaagatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||    |||||||| ||| |         |||||||||||||||| ||||||    
T  44645481 ccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 44645382  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  44645381 ttaaagttgcatgggaaatgtaaagcgacattcattttgaaa 44645340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 243
Target Start/End: Original strand, 25722450 - 25722659
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 133  Q
    |||||| |||||| ||| |  |||||||||| ||||| |||||||| |||||||||||||||||||| |||||||    |||| ||| |         ||    
T  25722450 ataacaattttactaaaataaccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttag 25722549  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaac 233  Q
    ||||||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||        || ||||| |||||||||||| ||||    
T  25722550 ggtaaagtatgaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaataattttttttggctaaagcgacactcattttgaaac 25722649  T
Q  234 ggaggaagta 243  Q
    ||||| ||||    
T  25722650 ggagggagta 25722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 41287255 - 41287082
Alignment:
Q  32 aaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa------g 125  Q
    ||||||||||| || ||||||||||||| ||||||| |||| |||||| ||||||  |||| |||||||||||||||||||| ||||||||||      |    
T  41287255 aaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgagaaaatggtttg 41287156  T
Q  126 a-----tggggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |     |   ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||    
T  41287155 agtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccatttt 41287082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 5244782 - 5244673
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||  ||| |  | |||| |||||||||||| ||||| |||||||||||||||||    
T  5244782 cacatattaagaaattgaatgaaataatcattagacataacacttttattaaagtctctttac-ttataagaaaaaaacaaacttaaagttgcattgaaa 5244684  T
Q  111 attatgtgaga 121  Q
    || ||||||||    
T  5244683 ataatgtgaga 5244673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 9167661 - 9167810
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 127  Q
    |||||||||||||||  | |||||| |||||| |||||||||||||||||| | ||||| | ||| ||||| |||||||||||||  ||  ||||||| |    
T  9167661 aatgaaataatcatttcacataacatttttactaaactgcccttactttattaaaaaaaaa-aaacttaaaattgcattgaaaatcgtgaaagaaaagtt 9167759  T
Q  128 ggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    |  || |||||||| ||||| |||||||||||||||||||| |||| ||||    
T  9167760 gaagatggtaaagtaggaagaaaaaaattaaagttgtattgaaaatataaa 9167810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 45095723 - 45095559
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacac-ttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||| ||| ||||||||||||||||  | ||||||| |||||| ||| ||||| |||||||||||||||| |||||| |||||| ||               
T  45095723 attaaggaatggaatgaaataatcattaaacataacacattttactaaaatgccccttactttataagaaaaggacaaacttaaaggtg----------- 45095635  T
Q  114 atgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
     || |||||||| ||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  45095634 -tgagagaaaagttggagagggtaaagttggaa--aaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 45095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 32303991 - 32304060
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  32303991 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaacaaa 32304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 54261615 - 54261414
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  54261615 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 54261516  T
Q  111 attatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||||||    |||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| ||| |||||||||||||    
T  54261515 attgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcattttgaaac 54261416  T
Q  198 aa 199  Q
    ||    
T  54261415 aa 54261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13485909 - 13486003
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||        | |||||||||||||||||| |||| |||| ||||    
T  13485909 aaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaaattgtttttgctaaagtgacactcattttgaaactgagggagta 13486003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 20512449 - 20512651
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| ||||| |||   |  ||| || |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  20512449 cacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 20512548  T
Q  111 attatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt-aaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||||||    |||| ||| |         | |||||||||||||| |||||||| ||||||| |||| |||||||||| ||||||||||||||||    
T  20512549 attgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaatttaaagttgcattgaaaatgtaaagcgacattcattttgaaa 20512648  T
Q  197 caa 199  Q
    |||    
T  20512649 caa 20512651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 22730989 - 22730924
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  22730989 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 22730924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 43687872 - 43688040
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 133  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||| ||||||||||| |||||||    |||| ||| |         ||    
T  43687872 ataacaattttactaaaataaccttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgag 43687971  T
Q  134 ggtaaagttggaaggaaaa---aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||   |||||||||||||||||||||||||||||||||| |||||| |||||    
T  43687972 ggtaaagttggaagaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttggaacaa 43688040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 43736842 - 43736922
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    ||||||||||||||| |||||||||||||||| ||||| | |||| ||||||||||||||| ||| ||||||||||||||||    
T  43736842 aatgaaataatcattagatataacacttttactaaactactcttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 27027933 - 27027732
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa----gacaaaattaaagttgcatt 106  Q
    |||| |||||| ||| ||||||||  ||||||  | ||||||||||||  ||| || ||||||||||||| |||||    |||||| |||||||||||||    
T  27027933 cacatattaagtaatggaatgaaa--atcattaaacataacacttttaataaagtgtccttactttataaaaaaaaaaaagacaaatttaaagttgcatt 27027836  T
Q  107 gaaaattatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    ||||||| |||||||  |||| ||| |         ||| ||||||| |||| ||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  27027835 gaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaagaaaaaaattaaatttgtattggaaatgtaaattgacattaattttgaa 27027736  T
Q  196 acaa 199  Q
    ||||    
T  27027735 acaa 27027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 27039524 - 27039415
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaa 109  Q
    |||| |||||| ||| ||||||||  ||||||  ||||||||||||||| ||| || ||||||||||||| ||||| |||||| ||||||||||||||||    
T  27039524 cacatattaagtaatggaatgaaa--atcattaaatataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaa 27039427  T
Q  110 aattatgtgaga 121  Q
    |||| |||||||    
T  27039426 aattgtgtgaga 27039415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 51381867 - 51381720
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga-----aaagatggg----------gagggtaaagttggaaggaaaa 152  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||     ||| || ||          |||||||||||| |||| ||||    
T  51381867 ccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaa 51381768  T
Q  153 aa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    || |||||||||||||| ||||||||||||||||| ||||||||||||    
T  51381767 aaattaaagttgtattgtaaatgtaaagtgacatttattttgaaacaa 51381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 4476334 - 4476498
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaag 125  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||| | | ||  |||||||||||||||||||| ||||||  |||||    
T  4476334 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaata-ataagcttaaagttgcattgaaaattgtgtgagaaaaaag 4476431  T
Q  126 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
     || ||| |||||| ||| ||| ||||||||||| |  ||||  ||||||||||||||||| |||||    
T  4476432 ttgaggaaggtaaaattgaaagaaaaaaattaaaatgatattaaaaatgtaaagtgacatttatttt 4476498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 35099453 - 35099518
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  35099453 agggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaaatgacatttattatgaaac 35099518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 36310339 - 36310404
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| || |||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  36310339 ggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgacatttattttgaaacaa 36310404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 53560807 - 53560754
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  53560807 ccttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgaga 53560754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 4392088 - 4391902
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    ||||||||||  ||||||||||| ||| || ||||||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| |    
T  4392088 attaagaaatgaaatgaaataattattagacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgt 4391998  T
Q  116 gtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    | ||||  |||| ||| |         ||||||||||||| || ||||||||||| ||||| |  ||||||||||||| ||||||||| |||||||    
T  4391997 gcgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaaaatgtaaagtgatattcattttaaaacaaa 4391902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 22414948 - 22414757
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||||||||||| ||| || |||| |||||||  ||||| ||  || |||||||||||| || ||| ||||||||||||||||||||    
T  22414948 agattaagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataagaaaa-gagaaacttaaagttgcattgaaaatt 22414850  T
Q  114 atgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
     ||| ||| ||| | | |         | |||||||||||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||    
T  22414849 gtgtaagagaaggttgagtatttattgaaggtaaagttggaagaaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 22414757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 43600152 - 43600341
Alignment:
Q  18 taagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaa-gacaaaattaaagttgcattgaaaattat 115  Q
    ||||||||  ||| ||||||| ||| ||||||||| |||||| ||||| ||||| ||||||||| ||||| |||||| ||||||||  |||| ||||| |    
T  43600152 taagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaattgt 43600251  T
Q  116 gtgaga--aaagatggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||  ||||  | |        ||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||| |||||||||    
T  43600252 gtgagagaaaagtagagtatttattgagggtaaagttggaag-aaaaaattaaaattgtattgaaaatgtaaagtaacatttattttgaaa 43600341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 3000883 - 3000751
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtat 166  Q
    |||||||||||||| |||||||||||||||||||| |||||||  |||| ||| |         |||||| |||||| || |||||| ||||||||||||    
T  3000883 aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtat 3000784  T
Q  167 tggaaatgtaaagtgacattcattttgaaacaa 199  Q
    || ||||||||||| ||||||||||| ||||||    
T  3000783 tgaaaatgtaaagtaacattcattttaaaacaa 3000751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 36541558 - 36541493
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||||||||| || ||| ||||||||||||| |||||||||  ||||||||||||||||    
T  36541558 gagggtaaagttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcattttgaaa 36541493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 42857148 - 42857212
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||| |||| |||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  42857148 ggtaaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaaca 42857212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 52222831 - 52222892
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||||||    
T  52222831 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatg--aaacgacattcattttga 52222892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 22731126 - 22731040
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagtt 101  Q
    ||||||||||||  |||||||||||||||  | |||||| |||||| |||||| ||| | ||||||||||||||||||| ||||||||    
T  22731126 agattaagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagtt 22731040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 49470851 - 49470788
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| ||||| | |||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  49470851 taaatttggatgaaaaaaattaaagttgtattgaaaatgtaaaacgacattcattttgaaacaa 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 15514830 - 15514872
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15514830 aaaaaattaaagttgtattggaaatgtaaagtgacatttattt 15514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 38165733 - 38165783
Alignment:
Q  137 aaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacatt 186  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  38165733 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacatt 38165783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 52202383 - 52202445
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||||||||||||||||| ||||| |||  |||||||||||| ||||||    
T  52202383 aaagttggaagaaaaaaattaaagttgtattgaaaatgcaaaacgacattcattttaaaacaa 52202445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 2988620 - 2988665
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  2988620 ccttactttataagaacaagacaaacttaaagttgcattgaaaatt 2988665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 43169477 - 43169424
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| |||||||    
T  43169477 ccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgaga 43169424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 53560726 - 53560617
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacgg 235  Q
    |||||||||||| ||||||||||||||| |||| |||||||||  |||||| |||||||||||||       |  |||||  ||| ||||||| ||||||    
T  53560726 taaagttggaag-aaaaaattaaagttgcattgtaaatgtaaaacgacatttattttgaaacaaatttttttgactaaagcaacattcattttgaaacgg 53560628  T
Q  236 aggaagtagaa 246  Q
    |||||||||||    
T  53560627 aggaagtagaa 53560617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 50420321 - 50420258
Alignment:
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| |||||||||||||||||||  ||||||||| ||||||| ||||| ||||||    
T  50420321 gtaaagttggaag-aaaaaattaaagttgtattaaaaatgtaaaatgacatttatttttaaacaa 50420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 5244652 - 5244584
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||   |||||||||||||| ||||  |||||||| |||||||||||||| |||||||    
T  5244652 gagggtaaagttggata-aaaaaattaaagttatattaaaaatgtaaggtgacattcattttaaaacaaa 5244584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 42007072 - 42007117
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||    
T  42007072 ccttattttataagaacaagacaaacttaaagttgcattgaaaatt 42007117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 42791388 - 42791330
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||| ||||||||||||||||| ||  ||| |||||||||||| |||||||||    
T  42791388 aaagttggaagaaaaaaattaaagttgtactgataat-taaagtgacattgattttgaaa 42791330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 43599520 - 43599571
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttata 79  Q
    ||||||||||||||| || |||| |||||||| |||||||||||| ||||||    
T  43599520 aatgaaataatcattagacataatacttttactaaactgcccttattttata 43599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 16240706 - 16240672
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||| ||||||||||||||||||||    
T  16240706 aagaaaaagacaaacttaaagttgcattgaaaatt 16240672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 15514752 - 15514785
Alignment:
Q  83 aaaagacaaaattaaagttgcattgaaaattatg 116  Q
    |||||||||| |||||||||||||||||||||||    
T  15514752 aaaagacaaacttaaagttgcattgaaaattatg 15514785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 32303915 - 32303960
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||||||| |||| |||||| || ||||||||||    
T  32303915 ccttactttataagaaaaaggcaaacttaaagctgtattgaaaatt 32303960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 36541634 - 36541581
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||| ||||||| ||| |||||||| |||||||||||| ||||||| |||||||    
T  36541634 ccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgaga 36541581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 42857046 - 42857102
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgc 67  Q
    ||||||||||| |||  ||||||||||||||| || |||||| |||||| |||||||    
T  42857046 cacagattaaggaatcaaatgaaataatcattagacataacatttttactaaactgc 42857102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 47895285 - 47895253
Alignment:
Q  211 taaagtgacactcattttaaaacggaggaagta 243  Q
    ||||| |||||||||||||||||||||||||||    
T  47895285 taaagcgacactcattttaaaacggaggaagta 47895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 52732782 - 52732552
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52732782 agattaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 52732683  T
Q  114 atgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggt 210  Q
     |||  |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||               
T  52732682 gtgtgagagaaaagttggggagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaattttttttaac 52732583  T
Q  211 taaagtgacactcattttaaaacggaggaag 241  Q
    |||||||||||||||||| ||||||||||||    
T  52732582 taaagtgacactcattttgaaacggaggaag 52732552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 43421082 - 43421273
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||     
T  43421082 cacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgctcttactttataagaaaaagacaaaattaaagttgcattgaat 43421181  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||| |||  |||||||  ||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  43421182 attgtgtgagagaaaacctggagagggtaaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcattttgaaacaaa 43421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 175
Target Start/End: Complemental strand, 34360197 - 34360033
Alignment:
Q  13 cagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    ||||||||| |||  ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34360197 cagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat 34360098  T
Q  113 tatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgt 175  Q
    | |||  |||||||| ||| ||||||||||||||||| |||||| ||||||||||||| ||||||    
T  34360097 tgtgtgagagaaaagttggagagggtaaagttggaagaaaaaaaataaagttgtattgaaaatgt 34360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 15501129 - 15501302
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 125  Q
    ||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||  ||||||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaag 15501228  T
Q  126 atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     ||  ||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15501229 ttgaagagagtaatgttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttcaaacaa 15501302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 21045327 - 21045108
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||| ||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21045327 cacagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 21045228  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnngg 209  Q
    ||| |||||||             | |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||       ||    
T  21045227 attgtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaatttttttgg 21045141  T
Q  210 ttaaagtgacactcattttaaaacggaggaagta 243  Q
     | || ||||||||||||| ||||||||||||||    
T  21045140 ctcaa-tgacactcattttgaaacggaggaagta 21045108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 51930765 - 51930556
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    |||| ||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  51930765 attatgaaatggaatgaaataataattggatataacgcttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgt 51930666  T
Q  116 gtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaag 215  Q
    ||||||             | ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||          |||||    
T  51930665 gtgaga-------------gaaaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcattttgaaacaaatttttttaactaaag 51930579  T
Q  216 tgacactcattttaaaacggagg 238  Q
    ||||||||||||| |||||||||    
T  51930578 tgacactcattttgaaacggagg 51930556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 32140944 - 32141119
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||||  ||||||||||  |||| |||||||||||    
T  32140944 cacagattaagaaattgaatgaaataatcattagacataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaa 32141043  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||             | ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32141044 attgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcattcattttgaaacaa 32141119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 54512217 - 54512034
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||||||||||| ||||||||||||  |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||     
T  54512217 cacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactgctcttactttataagaaaatgacaaaattaaagttgcattgaac 54512118  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| |||  |||||||| ||| |||| ||||||||||||  ||||||||||||| ||||  ||||||||||||| |||||||||    
T  54512117 attgtgtgagagaaaagttggagaggataaagttggaagataaaaattaaagttatattaaaaatgtaaagtgatattcatttt 54512034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 44855438 - 44855237
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44855438 cacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaa 44855339  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaag--ttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||  |||||||| |||          ||||||||||  |||||||  |||| |||||||||||||||||||||||||||||||| |||| |||||    
T  44855338 attgtgtgagagaaaagttggattatttattgagggtaaagaattggaagagaaaacttaaagttgtattggaaatgtaaagtgacatttatttcgaaac 44855239  T
Q  198 aa 199  Q
    ||    
T  44855238 aa 44855237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 50072438 - 50072238
Alignment:
Q  18 taagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt 117  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||      ||||||||||||||||||||||||| |||    
T  50072438 taagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataaga------caaaattaaagttgcattgaaaattgtgt 50072345  T
Q  118 gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtg 217  Q
    |||||||             |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||        || |||||||    
T  50072344 gagaaaa-------------aagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtg 50072258  T
Q  218 acactcattttaaaacggag 237  Q
    ||||||||||| ||||||||    
T  50072257 acactcattttgaaacggag 50072238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 31817157 - 31817375
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag-aaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  31817157 cacaaattaagaaatggaatgaaataatcattggatataacgtttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaa 31817256  T
Q  110 aattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnngg 209  Q
    |||| |||||||             | ||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||       ||    
T  31817257 aattgtgtgaga-------------gaaaagttggaagaaaaaaa--aaagttgcattggaaatgtaaagtgacattcattttgaaacaaatttttttgg 31817341  T
Q  210 ttaaagtgacactcattttaaaacggaggaagta 243  Q
     ||| |||||||||||||| ||||||||| ||||    
T  31817342 ctaatgtgacactcattttgaaacggagggagta 31817375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 36805408 - 36805600
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| |||||| ||||| |||||| |||||||||||| ||||||||| |||||||    
T  36805408 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgtccttagtttatatgaaaaagacaaacttaaagttgtattgaaa 36805507  T
Q  111 attatgtgag--aaaagatg--gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||||  ||||| ||  | |||| |||||||||||| |||||||||||||||||||| ||||||||| | |||| |||||| ||||||    
T  36805508 attgtgtgagaaaaaagttggagtgaggttaaagttggaagaaaaaaattaaagttgtattgcaaatgtaaaataacatacattttaaaacaa 36805600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 45520419 - 45520651
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat- 112  Q
    |||||||||||| |||| ||||||||||| || ||||||||||||| || |||||||||| ||||||||| |||||||| ||||||||||||| |||||     
T  45520419 agattaagaaatggaataaaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaatt 45520518  T
Q  113 -tatgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaann 202  Q
     |||| |||||||| | | |         ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||| |||      
T  45520519 gtatgagagaaaagtttgagtatttatcaaggataaagttggaa-gaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaataaatt 45520617  T
Q  203 nnnnnggttaaagtgacactcattttaaaacgga 236  Q
         ||||||| |||||||||||||||||||||    
T  45520618 attttggttaaaatgacactcattttaaaacgga 45520651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 37445837 - 37445655
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg--agaaaag 125  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||     
T  37445837 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaagaaaaa 37445738  T
Q  126 atgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     | |          ||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  37445737 tttgaatatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 37445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 19849273 - 19849079
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    ||||||||||  ||| ||||||| |||  |||||||| |||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||||||| |    
T  19849273 attaagaaatgaaataaaataattattacatataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgt 19849174  T
Q  116 gt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||  |||||||| |||          ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  19849173 gtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaacaa 19849079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 39671068 - 39671238
Alignment:
Q  15 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 114  Q
    ||||||||||| ||||||||| |||||| || ||||||| ||||| ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||     
T  39671068 gattaagaaatggaatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattg 39671167  T
Q  115 tgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||             | |||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39671168 tgtgaga-------------gaaaagtt-gaaagaaaaaattaaagttgtattggaaatgtaaaacgacattcattttgaaacaa 39671238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 56422957 - 56423056
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||| |||||||| |||||||||||    
T  56422957 cacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactgtctttactttataagaaaaagacgaaattaaaattgcattgaaa 56423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 24259771 - 24259606
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------ag 133  Q
    |||||| |||||| ||| |  |||||||||||||||||| |||||| |||||||||||||||||||| |||||||    |||| ||| |         ||    
T  24259771 ataacaattttactaaaataaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgag 24259672  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24259671 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagtgacattcattttgaaacaa 24259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 30022258 - 30022062
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| |||  ||| |||||||||||  ||||||||||||||| ||||| || ||  | ||||||||||||||||| | ||||||||||||||||||    
T  30022258 agattaaggaatgaaataaaataatcattatatataacacttttactaaactacc-ttcttgtataagaaaaagacaaactcaaagttgcattgaaaatt 30022160  T
Q  114 atgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
     |||||||  |||| ||  |         |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  30022159 gtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtcaagtaacattcattttgaaacaaa 30022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 22212535 - 22212336
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| |||||||| ||  ||||||  |||||  |||| ||||||||| |||||||    
T  22212535 cacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactgcctttgttttatataaaaaactcaaacttaaagttgtattgaaa 22212436  T
Q  111 attatgtgagaaaa--gatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||||||||  | ||| |         |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  22212435 attgtgtgagaaaaatgttggagtatttattgagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaggtgacattcattttaaaacaa 22212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 31941697 - 31941553
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa----agatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |    || ||| |         |||||||||||||||| ||||||    
T  31941697 ccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaa 31941598  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  31941597 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 31941553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 34096210 - 34096100
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||| ||||  ||||||||||||||| ||  |||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  34096210 cacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgcccttactttataagaaaaagacaaacttaaagtttcattgaaa 34096111  T
Q  111 attatgtgaga 121  Q
    ||| |||||||    
T  34096110 attgtgtgaga 34096100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 6462073 - 6462004
Alignment:
Q  130 ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6462073 ggagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttgaaacaa 6462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 56556237 - 56556410
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||||||||||||   |||| || ||||||||||||| ||| |  |||| |||||||||||||| ||||| ||||  || ||||||||    
T  56556237 cacagattaaggaattgaatgaaat---cattagacataacacttttactaaattatccttgctttataagaaaaatacaaacttaacattacattgaaa 56556333  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||||| ||             |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  56556334 attgtgtgagagaa-------------aagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 56556410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 31987430 - 31987306
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||||| ||||||||||||||||||||||| ||||  |||| ||| |         |||||||||||||||| |||||||||||||||||||    
T  31987430 aagaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtatt 31987331  T
Q  168 ggaaatgtaaagtgacattcatttt 192  Q
     ||||||||||||||||||||||||    
T  31987330 agaaatgtaaagtgacattcatttt 31987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 28116307 - 28116243
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  28116307 agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaa 28116243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 29840139 - 29840026
Alignment:
Q  131 gagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcatttta 229  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||        || |||||||||| |||||||     
T  29840139 gagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgacagtcattttg 29840040  T
Q  230 aaacggaggaagta 243  Q
    ||||||||| ||||    
T  29840039 aaacggagggagta 29840026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 35928650 - 35928486
Alignment:
Q  44 gatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatgggg---------agg 134  Q
    |||||| ||||||||| ||| |||| | ||||||||||||||||| ||| ||||| |||||||||||||| ||  ||||| | ||  |         |||    
T  35928650 gatatatcacttttactaaattgccatgactttataagaaaaagataaacttaaaattgcattgaaaattgtgaaagaaacgttgcagtatttattgagg 35928551  T
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  35928550 gtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatatttattttgaaacaa 35928486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 34124491 - 34124246
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  34124491 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 34124392  T
Q  111 attatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||||||    |||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||| ||||    
T  34124391 attgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaac 34124292  T
Q  198 aaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |||       |  ||||  |||||||||||||||| ||||||||||    
T  34124291 aaatttttttgactaaaacgacactcattttaaaatggaggaagta 34124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 19282501 - 19282567
Alignment:
Q  134 ggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19282501 ggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 19282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 42672583 - 42672481
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||||| | | |||||||||||||||||||||| ||||||||| |||||||    
T  42672583 cacaaattaaggaatataatgaaataatcattagacataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaa 42672484  T
Q  111 att 113  Q
    |||    
T  42672483 att 42672481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 47321341 - 47321138
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||||||| ||||| |||   |  ||| || |||||| ||| |  ||||||||||||||||||||||||  |||||||||||||||||    
T  47321341 cacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaagacaaccttaaagttgcattgaaa 47321242  T
Q  111 attatg----tgagaaaagatgggg---------agggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| ||    ||||||||| | | |         |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||    
T  47321241 attgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 47321142  T
Q  197 caaa 200  Q
    ||||    
T  47321141 caaa 47321138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 17499732 - 17499874
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||||    |||| | | |         |||||||||||||||| ||||||||    
T  17499732 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaatt 17499831  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||| ||||||||||||||| |||||||||||||||||||    
T  17499832 aaaattgcattggaaatgtaaagcgacattcattttgaaacaa 17499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 51434346 - 51434452
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||         ||||||| ||||||||||||||    
T  51434346 gagggtaaagtttgaaggaaaaaattaaagttgcattagaaatgtaaagcgacattcattttaaaacaatttttttttgttaaagcgacactcattttaa 51434445  T
Q  231 aacggag 237  Q
    |||||||    
T  51434446 aacggag 51434452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 45903377 - 45903559
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||  ||||||| |||||||||| |           ||||||||||||||||||||||    
T  45903377 agattaagaaatagaatgaaataatcattggatataacgcttttattaaactgctcttactttatta-----------aattaaagttgcattgaaaatt 45903465  T
Q  114 --atgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
      ||| ||||||||   | |         ||| | ||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||    
T  45903466 ggatgagagaaaagtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 45903559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 11835295 - 11835105
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||||||||||| ||| |  ||||||||||||  ||||| ||  || |||||||||||| || ||| ||||||||||||||||||||    
T  11835295 agattaagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagtttataagaaaa-gataaacttaaagttgcattgaaaatt 11835197  T
Q  114 atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
     ||||||| ||| | |          || |||||| ||| ||| |||||||||||||| ||||  |||||||||||||||||||||||||||    
T  11835196 gtgtgagagaaggttgagtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaaaaatgtaaagtgacattcattttgaaa 11835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 30492791 - 30492732
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatt 190  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  30492791 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 45889702 - 45889559
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt----gagaaaagatgg---------ggagggtaaagttggaaggaaaaaa 154  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| |||    |||||||| |||          ||||||||||| ||||| |||||     
T  45889702 ccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaagaaaaaag 45889603  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||    
T  45889602 ttaaagttgtattgaaaatgt-aagcgacattcattttgaaacaa 45889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 54233954 - 54233902
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  54233954 cttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgaga 54233902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 3093539 - 3093433
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||||||| ||||||||||| || |||||||||| |  ||| || |||| |||||||||||||| | ||| |||||||||||| | |||||    
T  3093539 agattaagaaattgaataaaataatcattagacataacactttcattaaattgtccttcctttataagaaaaa-agaaatttaaagttgcatcggaaatt 3093441  T
Q  114 atgtgaga 121  Q
     |||||||    
T  3093440 gtgtgaga 3093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 32141163 - 32141280
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga--tggggagggtaaagttggaaggaaaa-aattaaagttgtattggaaatg 174  Q
    ||||||||||||||| |||||||||||||       ||||||| |||||  ||| ||||||||||||||||| |||| |||||||||||||||  ||||     
T  32141163 taagaaaaagacaaacttaaagttgcatt-------atgtgaggaaagagttggagagggtaaagttggaagaaaaaaaattaaagttgtattcaaaata 32141255  T
Q  175 taaagtgacattcattttgaaacaa 199  Q
    | ||||||| |||||||||||||||    
T  32141256 tgaagtgacgttcattttgaaacaa 32141280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 6510181 - 6510112
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||  || ||||| |||||||||||||| |||| |||||||||||| |||||||||||||    
T  6510181 gagggtaaagttgagagaaaaaagttaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 6510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 17317950 - 17317999
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  17317950 aaaaaattaaagttgtattggaaatgtaatgtgacattcagtttgaaaca 17317999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 38692516 - 38692408
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||             ||||||| || ||||||||||||||  |||| |||||||||    
T  38692516 aagaaaaagacaaaattaaagttgcattgaaaattgtgcgagagaa-------------aagttgggagaaaaaaattaaagtttaattgaaaatgtaaa 38692430  T
Q  179 gtgacattcattttgaaacaaa 200  Q
    |||||||||||||| |||||||    
T  38692429 gtgacattcattttaaaacaaa 38692408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 1868208 - 1868255
Alignment:
Q  152 aaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  1868208 aaattaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 1868255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 6232141 - 6232192
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  6232141 aaaaaattaaagttgtattgaaaatgtaaattgacatttattttgaaacaaa 6232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 4408169 - 4408243
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||| |||||| ||| |  ||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||    
T  4408169 ataacaattttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 4408243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 38761788 - 38761898
Alignment:
Q  15 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 114  Q
    ||||||||||| |||| ||||||| | | || ||||||||||||| |||   |||||||||||| ||| ||||||| | |||||||| | |||||||||     
T  38761788 gattaagaaatagaattaaataattaatagacataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaattg 38761887  T
Q  115 tgtgagaaaag 125  Q
    || ||||||||    
T  38761888 tgagagaaaag 38761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 51737280 - 51737367
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagt 100  Q
    |||| |||||| ||| |||||||||||| ||| || ||||||||||||| ||| | ||||||||||||  |||||||||||| |||||||    
T  51737280 cacaaattaaggaatagaatgaaataataattagacataacacttttactaaattacccttactttat--gaaaaagacaaacttaaagt 51737367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 29289852 - 29289959
Alignment:
Q  17 ttaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaa---agacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||| |||||||||||||||| || |||| | |||||  |||  ||| ||||||||||| ||||   ||||||| ||||| ||||||||||||||    
T  29289852 ttaagaaatggaatgaaataatcattagacataatatttttaataaatcgcctttactttataaaaaaaaaaagacaaacttaaaattgcattgaaaatt 29289951  T
Q  114 atgtgaga 121  Q
     |||||||    
T  29289952 gtgtgaga 29289959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 44835398 - 44835341
Alignment:
Q  131 gagggtaaagtt-ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattc 187  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  44835398 gagggtaaagtttggaagaaaaaaattaaagttgtattcgaaatgtaaagtgatattc 44835341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 54233900 - 54233844
Alignment:
Q  139 agttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||    
T  54233900 agttggaag-aaaaaattaaagttgtattgaaaatgtaaagcggcattcattttgaaa 54233844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 54092021 - 54091953
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||  || |||||||||||||||||||  |||| |||| ||||||||||||| ||||||    
T  54092021 gagggtaaagttgagagaaaaaaattaaagttgtattaaaaatctaaattgacattcattttaaaacaa 54091953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 6231702 - 6231652
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |  |||| |||||||||||||||||||||||||    
T  6231702 aaaaaattaaagttgtactataaatataaagtgacattcattttgaaacaa 6231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 29289982 - 29290040
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||| |||| |||||||| ||||||||||| |||| |||||||||||| |||||    
T  29289982 ggtaaagtttgaagaaaaaaattgaagttgtattgaaaatataaagtgacattaatttt 29290040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 4408286 - 4408335
Alignment:
Q  150 aaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||    
T  4408286 aaaaattaaagttgcattgagaatgtaaagcgacattcattttgaaacaa 4408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 34096079 - 34096010
Alignment:
Q  131 gagggtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||  |||||| ||||| ||||||| |||||||||| |||||||| |||||||||||    
T  34096079 gagggtaaagttgaaaaaaaaaaaattaaaattgtattagaaatgtaaattgacattcgttttgaaacaa 34096010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 51434270 - 51434315
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||||||||| || || |||||||||||||||||    
T  51434270 ccttactttataagaaaaagactaactttaagttgcattgaaaatt 51434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 55126559 - 55126494
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||| |||| ||||  ||||||||||||||||||| |||| |||| ||||||||||||| ||||    
T  55126559 agggtagagttagaagagaaaaattaaagttgtattgaaaatttaaaatgacattcattttaaaac 55126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 55548313 - 55548380
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||| ||||||||||  || |||||||||||| |||| ||||||||||||||| | ||||||||||||    
T  55548313 gagggcaaagttggaaa-aagaaattaaagttgcattgaaaatgtaaagtgacacttattttgaaacaa 55548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 6462153 - 6462102
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga 119  Q
    |||||||||||||||| || ||||| |||||||||||||||| ||| |||||    
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtga 6462102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 30492914 - 30492828
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcatt 106  Q
    |||| |||||| ||| |||||||||||||||| || |||||||||||||  ||||||||         |||||||||||||| |||||||||||||    
T  30492914 cacaaattaaggaatggaatgaaataatcattagacataacacttttactgaactgccc---------aagaaaaagacaaacttaaagttgcatt 30492828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 28116384 - 28116334
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg 118  Q
    |||||||||||||||| |||||||| |||||||| || |||||||| ||||    
T  28116384 ccttactttataagaataagacaaacttaaagttacactgaaaattgtgtg 28116334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 34534111 - 34534157
Alignment:
Q  74 tttataagaaaaagacaaaatt-aaagttgcattgaaaattatgtga 119  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||    
T  34534111 tttataagaaaaagacaaacttaaaagttgcattgaaaattgtgtga 34534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 17317805 - 17317886
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaa 92  Q
    |||||||||| ||||  ||| ||||||||||| || ||  | ||||||| ||||| | ||||||||||||||||| ||||||    
T  17317805 cacagattaaaaaataaaataaaataatcattagacattgctcttttactaaactacgcttactttataagaaaaggacaaa 17317886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 55126636 - 55126591
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||| |||||||| |||||||||||  |||||||    
T  55126636 ccttactttataagaataagacaaacttaaagttgcaaggaaaatt 55126591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 29840249 - 29840193
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgc 67  Q
    |||| |||||| ||| |||||||||||||||| || ||||||||||||| ||| |||    
T  29840249 cacaaattaaggaatggaatgaaataatcattagacataacacttttactaaaatgc 29840193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 51434205 - 51434169
Alignment:
Q  208 ggttaaagtgacactcattttaaaacggaggaagtag 244  Q
    |||||||| |||| |||||||||||||||||||||||    
T  51434205 ggttaaagcgacattcattttaaaacggaggaagtag 51434169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 2e-67; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 29795156 - 29795381
Alignment:
Q  13 cagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    ||||||||  ||| |||||||||||||||| || |||| |||||||| |||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  29795156 cagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaactttaaagttgcattgaaaat 29795255  T
Q  113 tatgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggt 210  Q
    | |||||  |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||     
T  29795256 tgtgtgaaagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaatatttttggc 29795355  T
Q  211 taaagtgacactcattttaaaacgga 236  Q
    |||||||||| |||||||||||||||    
T  29795356 taaagtgacattcattttaaaacgga 29795381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 40410640 - 40410473
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40410640 cacagattaagaaatggaatgacataatcattggatataacgcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 40410541  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgta 176  Q
    ||| |||  |||||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  40410540 attgtgtcagagaaaagttggagagggtaaagttgggagaaaaaaattaaagttgtattggaaatgta 40410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 40987237 - 40987418
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||| ||| |||||||||||||||||    
T  40987237 cacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattgtccttactttataagaaaaagataaatttaaagttgcattgaaa 40987336  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| || |||||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  40987337 attgtgagagaaaagttggagagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcatttt 40987418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 4840682 - 4840881
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4840682 cacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 4840781  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | | |||  |||||||| | |          ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4840782 actgtgtgggagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttggaacaa 4840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 1381916 - 1381748
Alignment:
Q  31 gaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggg 130  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||| ||| ||||| |||||||||||||| || |||||||| |||     
T  1381916 gaaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgtgagagaaaagttgga 1381817  T
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    || |||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  1381816 gaaggtaaagttggaagaaaaaaatcaaagttatattggaaatgtaaagtaacattcattttaaaacaa 1381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 7743598 - 7743401
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||  |||| ||||||||||||||  |||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  7743598 cacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgcccttactttataagaaaaagacaaatttaaagttgcattgaaa 7743499  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||  |||||||| |||          ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7743498 attgtgtgagagaaaagttggactatttattgagggtaaagttggaagaaaaagattaaagttgtattggaaatgtaaagtgacattcattttaaaac 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 1298738 - 1298931
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  |||||||||||||||| |||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1298738 agattaagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1298837  T
Q  114 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||  |||||||| |||          |||| ||||||| || |  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  1298838 atgtgagagaaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 1298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 4766184 - 4766341
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 127  Q
    ||||||||||||||||||||||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||          
T  4766184 aatgaaataatcattggatataacgttattactaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgaga------ 4766277  T
Q  128 ggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
           | ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  4766278 -------gaaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaaca 4766341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 250
Target Start/End: Complemental strand, 4536742 - 4536521
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa---a 124  Q
    ||||||||||||||| || ||| ||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| |||||||||   |    
T  4536742 aatgaaataatcattagacatatcacttttactaaactgccc---------aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaagtta 4536652  T
Q  125 ga-----tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgac 219  Q
    ||     ||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||        || |||||||||    
T  4536651 gagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaattttttttggctaaagtgac 4536552  T
Q  220 actcattttaaaacggaggaagtagaatgca 250  Q
    ||||||||| ||||||||| |||| ||||||    
T  4536551 actcattttgaaacggagggagtataatgca 4536521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 14378219 - 14378371
Alignment:
Q  27 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 126  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||         
T  14378219 gaatgaaataatcatttaatataacacttttactaaactgcccttactttataagaaaaagataaatttaaagttgcattgaaaattatgcgaga----- 14378313  T
Q  127 tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
            | |||||||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  14378314 --------gaaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 14378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 194
Target Start/End: Original strand, 36360347 - 36360522
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaag-- 125  Q
    ||||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||| |||||||||| |||||||||||      
T  36360347 aatgaaataatcattagacataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttgtattgaaaattgtgtgagaaaagtt 36360446  T
Q  126 -------atggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
           ||   ||||||||||||| ||| |||||||||||||||||||| ||||| ||||||| |||||||||||    
T  36360447 tgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgcaaagtgatattcattttga 36360522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 34225944 - 34225771
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| |||  ||||||||||||||| || |||| | |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34225944 agattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 34225845  T
Q  114 atgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     |||||||             | |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34225844 gtgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 34225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 43460961 - 43460860
Alignment:
Q  17 ttaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatg 116  Q
    ||||||||| |||||||||||||||||||||   ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  43460961 ttaagaaatggaatgaaataatcattggata---cacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatg 43460865  T
Q  117 tgaga 121  Q
    |||||    
T  43460864 tgaga 43460860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 43388612 - 43388855
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  43388612 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 43388711  T
Q  111 attatgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| || |   || |        ||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  43388712 attatgtgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 43388811  T
Q  200 annnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |       || |||| ||||||||||||| ||||||||| ||||    
T  43388812 atttttttggctaaaatgacactcattttgaaacggagggagta 43388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 24775386 - 24775186
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||||||||  |||||||    
T  24775386 cacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgctcttactttataagaaaaaaacaaacttaaagttatattgaaa 24775287  T
Q  111 attatgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||| ||           ||||||||| |||| || ||||||||||| |||||||| ||||||||||||||| ||||||| ||||||    
T  24775286 attgtgtgagagaaaagttgaagtatttattgagggtaaacttgggagaaaaaaattaaaattgtattgaaaatgtaaagtgacaatcattttaaaacaa 24775187  T
Q  200 a 200  Q
    |    
T  24775186 a 24775186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 33093434 - 33093322
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||        || |||| ||||||||||||||    
T  33093434 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaatttttttagtcaaagagacactcattttaa 33093335  T
Q  231 aacggaggaagta 243  Q
    |||||||| ||||    
T  33093334 aacggagggagta 33093322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 16316863 - 16316710
Alignment:
Q  54 ttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaagatgg---------ggagggtaaagtt 142  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||          ||  ||||| ||    
T  16316863 ttttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaattt 16316764  T
Q  143 ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16316763 ggaagaaaaaaattaaagttgtattggaaatataaagtgacattcaatttgaaa 16316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 42970069 - 42969864
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 126  Q
    ||||||||||| ||| ||  |||||||||||| || |||| |||| ||||||| |||| || ||  |||||||||||||||||||| |||||||||| |     
T  42970069 aatgaaataattattagacgtaacacttttactaa-ctgctcttattttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgagaaaaaag 42969971  T
Q  127 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcat 225  Q
     |||||| |||||| || |||| ||||||||||||| |||||  ||||||||||||||||| ||||| ||| |||       || |||||||||||| ||    
T  42969970 ttggggaaggtaaaattagaagaaaaaaattaaagtggtattaaaaatgtaaagtgacatttattttaaaataaatatttttggctaaagtgacacttat 42969871  T
Q  226 tttaaaa 232  Q
    |||||||    
T  42969870 tttaaaa 42969864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 37107061 - 37106886
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataag--aaaaagacaaaattaaagttgcattga 108  Q
    |||| |||||||||| |||||||||||| ||| || | ||||||||||| ||| |||||||||||||||||  ||||||| ||| |||||||||||||||    
T  37107061 cacacattaagaaatggaatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattga 37106962  T
Q  109 aaattatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaat 173  Q
    ||||| |||  |||||||| ||| |         |||||||||||||||| |||||||||||||||||||| ||||    
T  37106961 aaattgtgtgagagaaaagttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 10580944 - 10581055
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||        || ||||  ||||||||||||||    
T  10580944 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttgaaacaattttttttggctaaa-cgacactcattttaa 10581042  T
Q  231 aacggaggaagta 243  Q
    |||||||||||||    
T  10581043 aacggaggaagta 10581055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 14698187 - 14698010
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| || || |||   |  ||| || |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  14698187 cacagattaagaaattgaataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 14698088  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||||| |           | ||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  14698087 attgtgtgagaga-----------gaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 14698010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 43344195 - 43344375
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 127  Q
    ||||||||||||||| || |||||| |||||  ||||  |||||||||||||||||||||| ||  ||||||||| |||||||||||||||||| || |     
T  43344195 aatgaaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgagagaaaaa 43344294  T
Q  128 ggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
       |||           ||||||||||||||  ||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  43344295 ttagagtatttattaaaggtaaagttggaag--aaaaattaaagttgtattgaaaatataaggtgacattcattttgaaacaa 43344375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 1360243 - 1360175
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1360243 gagggtaaaattgggagaaaaaaattaaagttgtattggaaatgcaaagtgacattcattttgaaacaa 1360175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 2459839 - 2459771
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  2459839 gagggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcattttaaaacaa 2459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 18374850 - 18374918
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  18374850 gagggtaaagttggaagaaaaaaattaaaattatattggaaatgtaaagtgacattcattttcaaacaa 18374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 41984561 - 41984416
Alignment:
Q  68 ccttactttataagaaaaagacaaaa-ttaaagttgcattgaaaattatgtg----agaaaagatgggg---------agggtaaagttggaaggaaaaa 153  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| ||||    ||||||| ||| |         | |||||||||||||| |||||    
T  41984561 ccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaagttggaagaaaaaa 41984462  T
Q  154 attaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||| |||||||||| || ||| ||||||||||||    
T  41984461 attaaagttgtattgaaaatgtaaagcgatatttattttgaaacaa 41984416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 775972 - 776039
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  775972 gagggtaaagttagaag-aaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaa 776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 25332636 - 25332525
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||| | ||| ||||||||||||||||        ||||||| |||| ||||||| |    
T  25332636 gaggataaagttggaag-aaaaaattaaagttgcattggaaatgtaaggcgacgttcattttgaaacaaattttttttgttaaagcgacaatcattttga 25332538  T
Q  231 aacggaggaagta 243  Q
    ||| |||||||||    
T  25332537 aacagaggaagta 25332525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 11171941 - 11171839
Alignment:
Q  10 gcacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    ||||| ||||||||||||||| ||||||||| | || ||||||||||||| ||| |  ||| |||||||  |||||||||||| |||||||| ||||| |    
T  11171941 gcacaaattaagaaattgaataaaataatcaatagacataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattgga 11171842  T
Q  110 aat 112  Q
    |||    
T  11171841 aat 11171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 39866762 - 39866820
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  39866762 ggtaaagttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcatttt 39866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 14511526 - 14511459
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| ||||||| | ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||    
T  14511526 gaggataaagtttggaggaaaaaattaatgttgtattcaaaatgtaaagagacattcattttgaaaca 14511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 45148055 - 45148106
Alignment:
Q  148 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  45148055 gaaaaaattaaagttttattgaaaatgtaaagtgacattcattttaaaacaa 45148106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 775875 - 775941
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||| |||||| ||| |  ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  775875 ataacaattttactaaaataaccttaatttataagaaaaagacaaacttaaagttgcattgaaaatt 775941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 4566112 - 4566186
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||| |||||| ||| |  ||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  4566112 ataacaattttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgaga 4566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 6592013 - 6591963
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  6592013 aaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 6591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 19506018 - 19505936
Alignment:
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggagg 238  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||        |||||||||||||||||||||||| |||||    
T  19506018 ttaaagttgtattgggaat-taaagtgacatttattttgaaacaaatttttttagttaaagtgacactcattttaaaatggagg 19505936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 44228659 - 44228609
Alignment:
Q  15 gattaagaaattgaatgaaataatcattggatataacacttttaccaaact 65  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||    
T  44228659 gattaaaaaatggaatgaaataatcattagatataacacttttactaaact 44228609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 2459915 - 2459862
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||| |||||||||| | |||||| |||||||||||||||||||| |||||||    
T  2459915 ccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgaga 2459862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 25332712 - 25332667
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  25332712 ccttactttataagaaaaagacaaacttagagttgtattgaaaatt 25332667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 45372645 - 45372686
Alignment:
Q  158 aagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  45372645 aagttgtattgaaaatgtaaagtgacattcattttaaaacaa 45372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 43460839 - 43460792
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    |||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  43460839 gagggtaacgttggaagagaaaacttaaagttgtattggaaatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 1360306 - 1360272
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||| ||||||||||||||||||||    
T  1360306 aagaaaaagacaaacttaaagttgcattgaaaatt 1360272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 4566214 - 4566263
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacat 185  Q
    |||||||| ||  |||||||||||||||||||  ||||||||||||||||    
T  4566214 taaagttgaaaaaaaaaaattaaagttgtattaaaaatgtaaagtgacat 4566263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 10580869 - 10580913
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||||| |||||||  ||||||||| ||||||||||    
T  10580869 cttactttataagaacaagacaatcttaaagttgtattgaaaatt 10580913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 33093510 - 33093458
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag 120  Q
    ||||||||||||| |  |||| ||| |||||||||||||||||||| ||||||    
T  33093510 ccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgag 33093458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 48259818 - 48260008
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||| ||||||||||||| || || ||||||||||||  ||||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  48259818 cacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgcccttgctttataagaaaaagataaacttaaagttgcattgaaa 48259917  T
Q  111 attatgtg--agaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||||  ||||||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48259918 attgtgtgaaagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 48260008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 40060861 - 40061048
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||||||||||| ||| || ||||||||||||| ||| |||||||||||||||||||||||| ||  ||| |||||||||||||    
T  40060861 cacatattaagaaatgaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaa 40060960  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||  |||||||| ||| |||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40060961 attttgtaagagaaaagttggagagggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 40061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 11650254 - 11650056
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||||||||||||||||||| |||| ||||||  | |||||| ||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  11650254 acagattaagaaattgaatgaaataaccattagatatagtatttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaa 11650155  T
Q  112 ttatgtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    || ||||||| ||| || ||          ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11650154 ttgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 11650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 84473 - 84692
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  84473 cacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgtccttactttataagaaaaagacaaacttaaagttgcattgaaa 84572  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggt 210  Q
    ||| || ||||             | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||         |     
T  84573 attgtgcgaga-------------gaaaaattggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaacaatttttttttgc 84659  T
Q  211 taaagtgacactcattttaaaacggaggaagta 243  Q
    |||||||||||||| ||||||||||||| ||||    
T  84660 taaagtgacactcaatttaaaacggagggagta 84692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 24040983 - 24041155
Alignment:
Q  15 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 114  Q
    ||||||| ||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  24040983 gattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattg 24041082  T
Q  115 tgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||             | |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24041083 tgtgaga-------------gaaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 24041155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 5317535 - 5317769
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    |||||||| |||  ||||||||||||||| || ||||||||||||| ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  5317535 agattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttattttataagaaaaagacaaacttaaagttgcattgaaaat 5317634  T
Q  113 tatgt-gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaann 202  Q
    | ||  |||||||| ||  |         |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||      
T  5317635 tgtggagagaaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaattgtaaagtgacattcattttgaaacaaatt 5317734  T
Q  203 nnnnnggttaaagtgacactcattttaaaacggag 237  Q
         || |||||||||||||||||| ||||||||    
T  5317735 ttgttggataaagtgacactcattttgaaacggag 5317769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 1430491 - 1430666
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgc-ccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||||||| |    
T  1430491 cacagattaagaaatttaatgaaataataattagatataacacttttactaaactgcactttactttataagaaaaagacaaacttaaagttgcattgga 1430590  T
Q  110 aattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| |||| ||             | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1430591 aattgtgtgtga-------------gaaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaaca 1430666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 43929881 - 43929683
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||| | ||| || |||||||||||||||||||| || ||||||||| || ||||    
T  43929881 cacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcgaaa 43929782  T
Q  111 attatgtgagaaaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| || |  ||          ||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  43929781 attatgtgagagaaaagtggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaactgaaattgacattcattttgaaacaa 43929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 52403672 - 52403563
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  52403672 acagattaagaaatggaatgaaataatcattggatataacactgttattaaactgcccttactttataaggaaaagacaaaattaaagttgcactgaaaa 52403573  T
Q  112 ttatgtgaga 121  Q
    ||||||||||    
T  52403572 ttatgtgaga 52403563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 44582791 - 44582973
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaat 155  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    |||| ||| |         |||||||||||||||| |||||||    
T  44582791 cttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaat 44582890  T
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggagg 238  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||        |||||||||||||||||||| |||||||||    
T  44582891 taaagttgtattggaaatgtaaagtgacatttattttgaaataaattgttttagttaaagtgacactcattttgaaacggagg 44582973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 1429059 - 1428865
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatta 114  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||     
T  1429059 attaagaaattgaatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaacttaaagttgaattggaaattg 1428960  T
Q  115 tgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||  |||||||| | |          ||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  1428959 tgtgagagaaaagtttgagtatttattgagggtaaagttgcaagaaaaaaatttaagttgtattagaaatgtaaagtgacattcattttaaaaca 1428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 28751363 - 28751600
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||||||| || |||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  28751363 cacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgcccttactttataagaaaaggacaaacttaaagttacattgaaa 28751462  T
Q  111 attat--gtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgaca-ttcattttgaaaca 198  Q
    ||| |  | |||||||| | |          ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |    
T  28751463 attgtgcgagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacatttcattttgaaata 28751562  T
Q  199 aannnnnnnggttaaagtgacactcattttaaaacgga 236  Q
    |        || |||||||||||||||||| |||||||    
T  28751563 attttttttggctaaagtgacactcattttgaaacgga 28751600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 50349812 - 50350057
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttact------ttataagaaaaagacaaaattaaagttgca 104  Q
    |||| |||||| ||| |||||||||||||||| || ||||||||||||| ||||||||||||||      |||||||||||||||||| |||||||||||    
T  50349812 cacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgcccttactttataattataagaaaaagacaaacttaaagttgca 50349911  T
Q  105 ttgaaaattatgt--gagaaaagatggggagggta--aagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgac--attcattttgaaaca 198  Q
    ||||||||| |||  |||||||| | | |    ||   || |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  50349912 ttgaaaattgtgtgagagaaaagtttgagtatttattgaggtggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatattcattttgaaaca 50350011  T
Q  199 aannnnnnnggttaaagtgacactcattttaaaacggaggaagtag 244  Q
    |        || |||||||| ||||||||| ||||||||| |||||    
T  50350012 attttttttggctaaagtgatactcattttgaaacggagggagtag 50350057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 12002443 - 12002244
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||||||  || |||| |||||||| |||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  12002443 cacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaa 12002344  T
Q  111 attatgtgagaaaagatggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||||| |   ||||           ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12002343 attgtgtgagaaaaaagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 12002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 17919793 - 17919971
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 126  Q
    |||||||||||||||  | ||||||||||||| |||||||||||  ||||||  ||||||||||| |||||||||||||||||||| |||||||||| |     
T  17919793 aatgaaataatcatta-acataacacttttactaaactgcccttgttttatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaag 17919891  T
Q  127 ----------tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
              |   ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  17919892 ttagagtatatattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgatattcattttgaaa 17919971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 37437358 - 37437549
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacactttt-accaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||| |||  ||||||||| ||||| || ||||||||||| || ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  37437358 cacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgcccttactttataagaaaaagacaaacttaaagttgcattgaa 37437457  T
Q  110 aattatgtgagaaaaga---tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| ||||||| || |   | | |||| |||||||| ||| ||| ||||||| |||||||| |||||||||| || | |||||||||||||    
T  37437458 aattgtgtgagagaaaaaattagagaggataaagttgaaagaaaataattaaaattgtattgaaaatgtaaagcgatactcattttgaaaca 37437549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 30006327 - 30006182
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||  |||||||||||||||||||| || |||||||| |||| ||| ||| |||||||||||||||||||| ||| |||||||||||||||||    
T  30006327 cacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttactttataagaaaaagataaatttaaagttgcattgaaa 30006228  T
Q  111 at--tatgtgagaaaagatggggagggtaaagttggaaggaaaaaa 154  Q
    ||  | || |||||||| ||| ||||||||||||| ||| ||||||    
T  30006227 attgtttgagagaaaagttggagagggtaaagttgaaagaaaaaaa 30006182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 10690910 - 10691074
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||||||||||||||| ||||||||| |||||| ||||||| |||||||  ||||||||||||||| |||||||||||||||||    
T  10690910 cacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattgaaa 10691009  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattca 188  Q
    ||| ||||||| |             ||||||| ||| ||||||||| |||||||||| |||||||||||||||||||    
T  10691010 attgtgtgagata-------------aaagttgaaagaaaaaaattatagttgtattgaaaatgtaaagtgacattca 10691074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 2459203 - 2458962
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||| |||||| || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  2459203 cacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 2459104  T
Q  111 attatgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaan 201  Q
    ||| || |||||||| | | |         |||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||     
T  2459103 attgtgagagaaaagtttgagtatttgttgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaacaaat 2459004  T
Q  202 nnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
          || ||||  |||||||||||| ||||||||| ||||    
T  2459003 ttttttggctaaaacgacactcattttgaaacggagggagta 2458962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 6332364 - 6332251
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||| ||  |||||| ||||||||||||  ||||||| ||||||||    
T  6332364 cacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatgaaaaagacaaacataaagttacattgaaa 6332265  T
Q  111 attatgtgagaaaa 124  Q
    ||| ||||||||||    
T  6332264 attgtgtgagaaaa 6332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 38132202 - 38132322
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    |||||||||||| ||| |||||| | |||||||||||||||||||| |||||||||           | ||||||||||| |||||||||||||||||||    
T  38132202 ccttactttataggaacaagacatacttaaagttgcattgaaaattgtgtgagaaa-----------gaaaagttggaagaaaaaaattaaagttgtatt 38132290  T
Q  168 ggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||||||||||||||    
T  38132291 ggaaatgtaaagtgacattcattttgaaacaa 38132322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 43105562 - 43105659
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||| | || ||| ||||||||||||||||||| ||||| ||||||||||||||    
T  43105562 attaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaatt 43105659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 26252260 - 26252116
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag----aaaagatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||| ||||||    ||||| | | |         |||||||||||||||| ||||||    
T  26252260 ccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaagttggaagaaaaaaa 26252161  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  26252160 tttaagttgtattggaaatgtaaagtgacattcattttgaaacaa 26252116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 22665091 - 22664937
Alignment:
Q  54 ttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatgggg---------agggtaaagttgg 144  Q
    |||||| |||||  |||||||||||||||| |||||||| ||||||||| ||| |||||| || |||| ||| ||| |         |||||||||||||    
T  22665091 ttttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaattgtgagagagaagttggagtatttattgagggtaaagttgg 22664992  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| ||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  22664991 aagaaattaattaacgttgtattggaaatgtaaagtgacattcattttgaaacaa 22664937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 254926 - 255068
Alignment:
Q  71 tactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag----aaaagatgggg---------agggtaaagttggaaggaaaa-aatt 156  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||    ||||| ||| |         |||||||||||||||| |||| ||||    
T  254926 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaatt 255025  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  255026 aaagttgcattggaaatgtaaagcgacattcattttgaaacaa 255068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 44583968 - 44583769
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| ||||||||||| || |||||| |||| | |||||||| ||| ||||||||||||||||||| |||| ||||||||||||    
T  44583968 cacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgcc-ttattttataagaaaaagacaaacttaatgttgcattgaaa 44583870  T
Q  111 attatgtg--agaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | ||||||  ||||||| | | |         ||||||||||  |||| |||||||||||||||||||  |||||||| |||||||||||||| ||||||    
T  44583869 actatgtgaaagaaaagttagagtacttattaagggtaaagtcagaagaaaaaaattaaagttgtattaaaaatgtaaggtgacattcattttaaaacaa 44583770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12851807 - 12851739
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12851807 gagggtaaagttgggagaaaaaaattaaagttctattggaaatgtaaagtgacattcattttgaaacaa 12851739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 17806392 - 17806567
Alignment:
Q  73 ctttataagaaaaagacaaaattaaagttgcattgaaaatt--atgtgagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagt 161  Q
    |||||||||||||||||||| ||||| ||||||||||||||  ||| |||||||| ||| |         | |||||| ||||||| |||||||||||||    
T  17806392 ctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaagtaaaaaattaaagt 17806491  T
Q  162 tgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggag 237  Q
    |||||||||||||||||| |||| ||||||| ||||||        || |||||||||||||||||| ||||||||    
T  17806492 tgtattggaaatgtaaagcgacactcattttaaaacaattttttttggctaaagtgacactcattttgaaacggag 17806567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 15698705 - 15698905
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccct-tactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||| |||  ||| ||||||||||| || |||||||||| |  ||||| || | |||||||||||||||||| ||| ||||||||  ||||||    
T  15698705 cacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtactttataagaaaaagataaacttaaagttctattgaa 15698804  T
Q  110 aattatgtgagaaaaga---tggg--------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||||||||||| || |   || |        ||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  15698805 aattatgtgagagaaaagtttgagtatttattgagagtaaagttggaagaagaaaattaaagttgtattggaaatataaagtgacattcattttaaaaca 15698904  T
Q  199 a 199  Q
    |    
T  15698905 a 15698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 45377236 - 45377301
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  45377236 gagggtaaagttgggagaaaaaaagtaaagttgtattggaaatgtaaagtgacattcattttgaaa 45377301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 234
Target Start/End: Complemental strand, 43755187 - 43755016
Alignment:
Q  49 aacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaagg 148  Q
    ||||||||||| |||  |||||||||| |||||||||||||||| |||||||||  ||||||||| ||||||| ||             ||||||||||     
T  43755187 aacacttttactaaatcgcccttacttaataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaa-------------aagttggaag- 43755102  T
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacg 234  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||        || |||||||||||||||||| |||||    
T  43755101 aaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttgaaataattttttttggctaaagtgacactcattttgaaacg 43755016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 45749470 - 45749554
Alignment:
Q  27 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||| ||||||||||| || ||||||||||||| |||| ||||||||||||||||||||||||||| ||||| || |||||||||    
T  45749470 gaataaaataatcattagacataacacttttactaaaccgcccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 199
Target Start/End: Original strand, 48319981 - 48320144
Alignment:
Q  36 aatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaat-tatgtgagaaaagatggggagg 134  Q
    ||||||| || |||| |||||||| ||| |||||||||||||||| | ||||||||| |||||||||||| |||| | | || |||| ||  ||| |||     
T  48319981 aatcattagacataagacttttactaaattgcccttactttataaaagaaagacaaacttaaagttgcatcgaaattgtgtgagagataaattggagaga 48320080  T
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| ||| |||||||||||| |||||||| |||| |||||| ||||| ||||| ||||||    
T  48320081 gtaaagtt-gaaagaaaaaattaaatttgtattgaaaatataaagtaacatttattttaaaacaa 48320144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 44024611 - 44024499
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||||||||||||         | ||||| ||||||||||||||    
T  44024611 gagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcattttgaaacaatttttttttgctaaagcgacactcattttaa 44024512  T
Q  231 aacggaggaagta 243  Q
    |||||||| ||||    
T  44024511 aacggagggagta 44024499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 2245982 - 2245791
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| ||||||| ||||||||  | |||| | |||||| |||||| | || |||||||||||||||||||| |||||| |||||||||||||    
T  2245982 agattaagaaatggaatgaagtaatcattaaacataatatttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattgaaaatt 2245883  T
Q  114 ----atgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
        | | |||||||| | |          ||||||||||||| ||| |||| ||||||||||||||| |||||||| ||||||||||||||    
T  2245882 gtgaaagagagaaaagtttgagtatttattgagggtaaagttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcatttt 2245791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 49894943 - 49894807
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaa 146  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||| ||             ||||| |||    
T  49894943 ataacaattttactaaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaa-------------aagttagaa 49894857  T
Q  147 ggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    | |||||||||||||||||||||||||||||| | |||||||||||||||    
T  49894856 gaaaaaaattaaagttgtattggaaatgtaaaataacattcattttgaaa 49894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 50158276 - 50158458
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||           ||||||||||||||| ||||||    
T  50158276 agattaagaaatataatgcaataatcattggatataacacttttactaaacttcccttgctttataa-----------aattaaagttgcatt-aaaatt 50158363  T
Q  114 atgtgaga--aaagatgggga---------gggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
     |||||||  |||| ||| ||         || |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  50158364 gtgtgagagaaaagttggagaattttttgaggttaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 50158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 40719195 - 40719020
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 127  Q
    ||||||||||||||| || || ||| |||||| |||||||| ||  |||||| |||||||| ||| ||||||||| ||||| |||| ||| |||||| |     
T  40719195 aatgaaataatcattagacatcacatttttactaaactgccattgttttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaaaaag 40719096  T
Q  128 ggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
      ||||           |||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||    
T  40719095 ttggagtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaattgacattcatttt 40719020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 200
Target Start/End: Original strand, 5854238 - 5854381
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| |||||||    |||| ||| |         ||| |||||||||||  ||||||||    
T  5854238 ttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaatt 5854337  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||| ||||||||||||||| |||||| ||| |||||||||    
T  5854338 aaagttgcattggaaatgtaaagcgacatttattctgaaacaaa 5854381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 26582985 - 26582923
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  26582985 aaagttcgaagaaaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaacaa 26582923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 28200310 - 28200379
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgta-ttggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||||||| | ||| ||||||| || |||||||||||||||||||    
T  28200310 gagggtaaagttggaagaaaaaaattaaagttgcatttgaaaatgtagagcgacattcattttgaaacaa 28200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 9552368 - 9552420
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  9552368 cttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgaga 9552420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 9552436 - 9552484
Alignment:
Q  151 aaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9552436 aaaattaaagttgtattggaaatgtaaaatgacattcattttaaaacaa 9552484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 15647150 - 15647215
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| || ||||||  ||| |||||||| ||||||||||||||||||||||||||||||    
T  15647150 agggtaaagttgggagaaaaaaa--aaatttgtattgaaaatgtaaagtgacattcattttgaaacaa 15647215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 43738344 - 43738408
Alignment:
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| ||| |||||||| ||||||||||| |||||| |||||||||||||||| ||||||    
T  43738344 gtaaagttgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaacaa 43738408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 11134548 - 11134614
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||| ||||||||||  || |||||||||||| |||| |||||||||||||||||||||||||||||    
T  11134548 gagggcaaagttggaaa-aagaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaaca 11134614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 42650339 - 42650402
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||||| |||||| ||||| ||||    
T  42650339 ggtaaagctggaagaaaaaaattaaagttgtattagaaatgtaaagcgacatttattttaaaac 42650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 42650261 - 42650314
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  42650261 ccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgaga 42650314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 52403542 - 52403482
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattt 191  Q
    ||||||||||||||||   |||| |||||||||||||| |||| |||||||||||||||||    
T  52403542 gagggtaaagttggaatagaaaacttaaagttgtattgaaaatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 672300 - 672346
Alignment:
Q  75 ttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||    
T  672300 ttataagaaaaagacaaacttaaatttgcattgaaaattgtgtgaga 672346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 672397 - 672460
Alignment:
Q  175 taaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggagg 238  Q
    |||||||||||||||||| |||||||       || ||||||||||||||||||||||||||||    
T  672397 taaagtgacattcattttaaaacaaatttttttggctaaagtgacactcattttaaaacggagg 672460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 35149394 - 35149436
Alignment:
Q  71 tactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  35149394 tactttataagaaaaagataaaattaaagttgcattgataatt 35149436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 35149485 - 35149535
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| |||||||    
T  35149485 aaaaaattaaagttgtattggaaatataaagtgaaatttatttcgaaacaa 35149535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 50591388 - 50591446
Alignment:
Q  137 aaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||  ||||||||||||||    
T  50591388 aaagttggaagaaaaaaaattaaagttgtattggtaatgtaaaacgacattcattttga 50591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 6332229 - 6332164
Alignment:
Q  135 gtaaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| ||| |||||| |||||||||| ||  ||||||||||||||||||||||| ||||||    
T  6332229 gtaaagttgaaagaaaaaaaattaaagttgtgttaaaaatgtaaagtgacattcattttaaaacaa 6332164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 28200234 - 28200279
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  28200234 ccttactttataagaaaaatacaaacttaaagttgtattgaaaatt 28200279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 43738214 - 43738311
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||  ||| ||||||| ||| || |||| | |||||| ||||| || ||||||||||||||||||| |||  ||||||| | |||||||||    
T  43738214 attaagaaatgaaataaaataattattagacataatatttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaatt 43738311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 9333168 - 9333105
Alignment:
Q  137 aaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  9333168 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9333105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 9356941 - 9356878
Alignment:
Q  137 aaagttggaaggaaaaaa-ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||| ||||| ||||| ||||||    
T  9356941 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaacaa 9356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 43105692 - 43105772
Alignment:
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacgga 236  Q
    ||||||||||||| |||||||| |||||||||||||| ||| |||       ||||||| ||||||||| ||| |||||||    
T  43105692 taaagttgtattgaaaatgtaaggtgacattcattttaaaataaattgttttggttaaaatgacactcactttgaaacgga 43105772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 12851870 - 12851836
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||||||||||||||||||| ||||||    
T  12851870 aagaaaaagacaaaattaaagttgcattaaaaatt 12851836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 50249331 - 50249264
Alignment:
Q  176 aaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |||||||||||||||||||||||||       || ||||| ||||||||||||||||| |||| ||||    
T  50249331 aaagtgacattcattttgaaacaaatttttttggctaaagcgacactcattttaaaacagagggagta 50249264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 50591309 - 50591381
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga 119  Q
    |||||| |||||| ||| |  ||||| |||||| ||| |||||||| ||||| |||||||||||||| |||||    
T  50591309 ataacaattttactaaaataaccttattttataggaacaagacaaacttaaaattgcattgaaaattgtgtga 50591381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 28044101 - 28044286
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    ||||||||||  ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  28044101 attaagaaataaaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgt 28044200  T
Q  116 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||  |||||||  ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  28044201 gtgagagaaaaattggagaggataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 28044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 36447567 - 36447757
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||||||| |||||||||||| | |||||||||| ||||||  |||||| | ||||||||||||||||||| ||||||||||||| ||||||||    
T  36447567 acagattaagaaatggaatgaaataattactggatataactcttttattaaactgtctttactttataagaaaaagataaaattaaagttgaattgaaaa 36447666  T
Q  112 ttatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||  |||||||| |||  |||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||| |||||||    
T  36447667 ttatgtgagagaaaagttggaaagggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgatattcattttaaaacaaa 36447757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 18886843 - 18886667
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18886843 cacagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaa 18886744  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||| ||||   |||||          ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  18886743 attgtgtg---aaaga----------aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaacaaa 18886667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 42121740 - 42121500
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||| ||||||||||| || ||| ||||||||| |||||| ||||||||||| ||||||||| | | |||||||||||||||||    
T  42121740 cacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttattagaaaaagatacacttaaagttgcattgaaa 42121641  T
Q  111 at--tatgtgagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnn 207  Q
    ||  | || |||||||| ||| ||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||            
T  42121640 attgtttgagagaaaagttggagagagtaaagttggaagaaaaaaaattaaagttgtattggaaatataaagtgacattcattttgaaacaatttttttt 42121541  T
Q  208 ggttaaagtgacactcattttaaaacggaggaagtagaatg 248  Q
     | |||||||||| ||||||||||||||||| |||| ||||    
T  42121540 tgctaaagtgacattcattttaaaacggagggagtataatg 42121500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 17869435 - 17869192
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||  ||| || | ||||||||||||||||| ||||| |||||||||||||||||    
T  17869435 cacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtctttactttataagaaaaatacaaacttaaagttgcattgaaa 17869336  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||||| |          |||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17869335 attgtgtgagagaaaagattgagtatttattgaggataaagttggaaggaaaaaattaaagttgcattggaaatgtaaaatgacattcattttgaaacaa 17869236  T
Q  200 annnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |        | |||||||||||||||||||||||||||| ||||    
T  17869235 atttttttcgctaaagtgacactcattttaaaacggagggagta 17869192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 32275393 - 32275203
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  |||||||||||||||  | || ||  |||||| |||||||| |||||||||||||||||  |||| |||||||||||||||||    
T  32275393 cacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgcctttactttataagaaaaaatcaaacttaaagttgcattgaaa 32275294  T
Q  111 attatgtga--gaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||  |||||| | | ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  32275293 attgtgtgaaggaaaagtttgagagggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtggcattcattttgaaacaa 32275203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 41905890 - 41906089
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41905890 cacagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 41905989  T
Q  111 attatgt--gagaaaagatgggg--------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||| |||  |||||||| ||| |          ||||||||||||||  |||| ||||||||||||| |||||||||||||||||| ||||| |||||||    
T  41905990 attgtgtaagagaaaagttggagtatttattgaggtaaagttggaagagaaaacttaaagttgtattagaaatgtaaagtgacatttattttaaaacaaa 41906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 22627313 - 22627495
Alignment:
Q  15 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatta 114  Q
    ||||||| |||  |||||||||||| ||  | ||||||| ||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||||||     
T  22627313 gattaaggaatgaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattg 22627412  T
Q  115 tgt--gagaaaagatggggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 193  Q
    |||  |||||||| ||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  22627413 tgtgagagaaaagttggagagggtaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttg 22627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 34002087 - 34002277
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||| | ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  34002087 cacagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactgcactttactttataagaaaaagacaaaattaaagttgcattgaa 34002186  T
Q  110 aattatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcat 189  Q
    |||| |||  |||||||| |||          ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  34002187 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaataaaattaaacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 243
Target Start/End: Original strand, 40207379 - 40207576
Alignment:
Q  45 atataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttgg 144  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||||| || | |||||| ||  |||| ||||||||     
T  40207379 atataacacttttactaaactgcccttactttataagaaaatgacaaacttaaaattgcattgaaaattgtgag-gaaaagttgaagaggataaagttga 40207477  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    ||| |||||||||||||||||||  |||| |||| |||||||||||||||| |||        || |||||||||||||||||| ||||||||| ||||    
T  40207478 aagaaaaaaattaaagttgtattaaaaatataaaatgacattcattttgaagcaattttttttggctaaagtgacactcattttgaaacggagggagta 40207576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 3680878 - 3681077
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| |||||||||||||||| || |||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||    
T  3680878 cacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaa 3680977  T
Q  111 attatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||| | | |         | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3680978 attctgtgagagaaaagttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaacaa 3681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 33056242 - 33056433
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttacttta-taagaaaaagacaaaattaaagttgcattgaaaat 112  Q
    |||||||| |||  |||||||||||||||  | ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  33056242 agattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgcccttactttattaagaaaaagacaaatttaaaactgcattgaaaat 33056341  T
Q  113 tatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaa---tgtaaagtgacattcattttgaaacaaa 200  Q
    | |||  |||||||| ||| |||| ||||||| ||| |||||||||||||||||||||||||   |||||| ||||||| |||||||||||||    
T  33056342 tgtgtgagagaaaagttggagaggataaagtt-gaaagaaaaaattaaagttgtattggaaatgttgtaaaatgacatttattttgaaacaaa 33056433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 1103681 - 1103482
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    ||||||||||||||  |||||||||||||   || | |||| |||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||||||    
T  1103681 acagattaagaaataaaatgaaataatcaccagacaaaacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaa 1103582  T
Q  112 ttatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    || |||||||  |||| ||  |         |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  1103581 ttgtgtgagagaaaagttgaagtatttattgagggtaaagttggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcattttgaaacaaa 1103482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 40299036 - 40298802
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||| |||  ||||||||||| |||||| ||||||||||||| |||||||||         |||||||||||||| |||||||| ||||||||    
T  40299036 cacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgccc---------aagaaaaagacaaacttaaagttacattgaaa 40298946  T
Q  111 attatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||  |||| ||| |         ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40298945 attgtgtgagagaaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 40298846  T
Q  200 annnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
            || |||||||||||||||||| ||||||||| ||||    
T  40298845 ttttttttggctaaagtgacactcattttgaaacggagggagta 40298802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 34733500 - 34733394
Alignment:
Q  18 taagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt 117  Q
    ||||||||  ||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||     
T  34733500 taagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtga 34733401  T
Q  118 gagaaaa 124  Q
    |||||||    
T  34733400 gagaaaa 34733394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 42259521 - 42259702
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag--aaaag 125  Q
    ||||| ||||| ||| || ||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||    
T  42259521 aatgagataattattagacataacacttttactaaaatgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaag 42259620  T
Q  126 atgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     | |          |||||||||||||||| ||||||||||||||||||||| ||| ||||| | ||||||||||| ||||||    
T  42259621 tttgagtatttattgagggtaaagttggaa-gaaaaaattaaagttgtattgaaaacgtaaaataacattcattttaaaacaa 42259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 43813431 - 43813543
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||       || ||||| ||||||||||||||    
T  43813431 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaacaaattttgttggctaaagcgacactcattttaa 43813530  T
Q  231 aacggaggaagta 243  Q
    |||||||| ||||    
T  43813531 aacggaggtagta 43813543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 26963643 - 26963478
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt----gagaaaagatgg---------ggag 133  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||    |||||||| |||          |||    
T  26963643 ataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgag 26963544  T
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  |||||| ||||||||||||    
T  26963543 ggtaaagttggaagaaaaaaattaaagttgcattggaaatgtaaatagacatttattttgaaacaa 26963478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 22597297 - 22597191
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||       || |||||||||||||||||| |    
T  22597297 gaggttaaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaaattcttttggctaaagtgacactcattttga 22597198  T
Q  231 aacggag 237  Q
    |||||||    
T  22597197 aacggag 22597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 32345789 - 32345991
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||| || || |||   |  |||||| |||||| ||| |  ||||||||||||||||||| ||||| ||||||||| |||||||    
T  32345789 cacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaa 32345888  T
Q  111 attatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||||||    |||| ||| |         |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  32345889 attgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttgaaac 32345988  T
Q  198 aaa 200  Q
    |||    
T  32345989 aaa 32345991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 19906555 - 19906413
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggg---------gagggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||| || ||||  |||| |||          ||||||||||||||||| |||||||     
T  19906555 ccttactttataggaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaagaaaaaaata 19906456  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  19906455 aaagttgtattggaaatgtaaagcgacattcattttgaaacaa 19906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 26527356 - 26527544
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| ||||| |||||||||| || ||||||| ||||| |||||||  ||||||||||||||||| | ||| ||||||||||||||||||||    
T  26527356 agattaagaaatggaatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaa-aaaaatttaaagttgcattgaaaatt 26527454  T
Q  114 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    || |   ||||||| |||          |||| ||||||| |||| |||||||||||||||||||| ||||||||| | |||||||||||    
T  26527455 atttaacagaaaagttggagtatttattgaggttaaagttagaagaaaaaaattaaagttgtattgaaaatgtaaaataacattcatttt 26527544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 30515037 - 30514972
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30515037 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcattttgaaacaa 30514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 36836123 - 36836018
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaac 233  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||       |  ||||| |||||||||||| ||||    
T  36836123 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagcgacattcattttgaaacaaattattttgactaaagcgacactcattttgaaac 36836024  T
Q  234 ggagga 239  Q
    ||||||    
T  36836023 ggagga 36836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 42044066 - 42044178
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||        | |||||| |||||||||||| |    
T  42044066 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattaattttgaaataattttttttgattaaagcgacactcattttga 42044165  T
Q  231 aacggaggaagta 243  Q
    |||||||| ||||    
T  42044166 aacggagggagta 42044178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 19288434 - 19288499
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19288434 gagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaa 19288499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 31416838 - 31416906
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  31416838 gagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgatattcattttaaaacaa 31416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 18733502 - 18733415
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacgga 236  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||        || ||||| ||||||||||||||||||||    
T  18733502 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttaaaacgga 18733415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 19920358 - 19920419
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  19920358 gagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 19920419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 42010553 - 42010632
Alignment:
Q  34 ataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||| || |||| | |||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  42010553 ataatcattagacataatatttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaatt 42010632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 36447083 - 36447225
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaatt 156  Q
    |||||||||||||| |||||||  |||||||||||||||||||| |||||||    |||| ||| |         ||| ||||||||||||  |||||||    
T  36447083 ttactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaatt 36447182  T
Q  157 aaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||||||| ||||||||| ||||||||||||||||||||    
T  36447183 aaaattgtattgaaaatgtaaaatgacattcattttgaaacaa 36447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 39117479 - 39117638
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga---aaagatgg---------ggagg 134  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||||||||||||||| |||||||   |||  |||          ||||    
T  39117479 ataacaattttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagg 39117578  T
Q  135 gtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    |||| |||||||| ||| |||||||||||||||| |||||||||  ||||||||||||||    
T  39117579 gtaatgttggaagaaaataattaaagttgtattgaaaatgtaaaacgacattcattttga 39117638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 5723069 - 5723006
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    |||||||||||| | || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  5723069 gagggtaaagttaggag-aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaa 5723006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 10684918 - 10684986
Alignment:
Q  132 agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||||   ||||||||||||||||||    
T  10684918 agggtaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcattttgaaacaaa 10684986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 48838635 - 48838750
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaa-----aaagacaaaattaaagttgcat 105  Q
    |||| |||||| |||  ||||||||||||||| || |||||| || ||| |||||| ||||||||||||| ||     ||||||||| ||||||||||||    
T  48838635 cacaaattaaggaataaaatgaaataatcattagacataacatttatactaaactgaccttactttataaaaataaaaaaagacaaatttaaagttgcat 48838734  T
Q  106 tgaaaattatgtgaga 121  Q
    |||||||| |||||||    
T  48838735 tgaaaattgtgtgaga 48838750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 10684820 - 10684894
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||| |||||| ||| |  ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  10684820 ataacaattttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgaga 10684894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 29001634 - 29001740
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacgga 236  Q
    ||||||||||| | |||||||| ||| |||||||||||||||  |||||| ||||||||||||        |  ||||||||||||||||||||||||||    
T  29001634 aaagttggaagaataaaattaaggttatattggaaatgtaaaacgacattaattttgaaacaattatttttgactaaagtgacactcattttaaaacgga 29001733  T
Q  237 ggaagta 243  Q
     ||||||    
T  29001734 tgaagta 29001740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 32873268 - 32873319
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  32873268 aaaaaattaaaattgtattggaaatataaagtgacattcattttaaaacaaa 32873319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 30833066 - 30833241
Alignment:
Q  27 gaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga 126  Q
    |||||||||||| ||| |||||||||||||||| ||| || | ||  |||||| |||||||||||| ||| |||| || |||||||| |||||||||| |    
T  30833066 gaatgaaataattattagatataacacttttactaaattgtc-ttgttttatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaa 30833164  T
Q  127 tggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
       ||||           |||||||||| ||| ||||||| |||||||||||| ||||||||| ||| |||||||||    
T  30833165 gttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattgaaaatgtaaaatgatattcatttt 30833241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 6521960 - 6521907
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  6521960 ccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgaga 6521907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 19277057 - 19277110
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  19277057 ccttactttatatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 19277110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 47272313 - 47272240
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgag 120  Q
    |||||| |||||| |||||||||||  |||||| ||||||||||||  |||| |||||||||||||| ||||||    
T  47272313 ataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag 47272240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 31416763 - 31416815
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||| |||||||||| |||||||| |||||||||||||||||||| |||||||    
T  31416763 cttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgaga 31416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 33845391 - 33845478
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa 124  Q
    |||||||||||||||  || |||||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| || |||||||    
T  33845391 aatgaaataatcattacatgtaacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaa 33845478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 40805073 - 40804977
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggaggaagtagaa 246  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| ||| |||          || ||||||||||||||||||||||| |||||||||    
T  40805073 aaaaaattaaagttgtattgtaaatgtaaagtgacatttattttaaaataaatttttta-tctagagtgacactcattttaaaacggaagaagtagaa 40804977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 36836199 - 36836148
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||  || |||||||| ||||||||||||||||||||||||||||    
T  36836199 ttactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgaga 36836148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 18733583 - 18733540
Alignment:
Q  81 gaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaa 124  Q
    |||||||||||| ||||||||||||||||| || ||||||||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaa 18733540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 42753744 - 42753705
Alignment:
Q  161 ttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  42753744 ttgtattggaaattgaaagtgacattcattttgaaacaaa 42753705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 5723128 - 5723090
Alignment:
Q  83 aaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  5723128 aaaagacaaacttaaagttgcattgaaaattgtgtgaga 5723090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 29001577 - 29001631
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaa 123  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||| |||||||||    
T  29001577 cttattttataggaacaaaacaaacttaaagttgcattgaaaattgtgtgagaaa 29001631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 47271789 - 47271731
Alignment:
Q  135 gtaaagttggaaggaaaaaat-taaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||||| ||||||  |||||||||||||||||| || |||| ||||||||||    
T  47271789 gtaaagttggaagaaaaaaaactaaagttgtattggaaatctagagtgtcattcatttt 47271731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 32873127 - 32873168
Alignment:
Q  17 ttaagaaattgaatgaaataatcattggatataacactttta 58  Q
    ||||||||||||||| |||||||||| ||||||||| |||||    
T  32873127 ttaagaaattgaatgcaataatcattagatataacattttta 32873168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 12040 - 12219
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||| ||| |||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  12040 agattaaggaatggaatgaaataatcattagacataacacttttactaaactgcc-ttactttataagaaaaagacaaacttaaagttgcattgaaaatt 12138  T
Q  114 atgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
     |||||||  |||| | | ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  12139 gtgtgagagaaaagtttgagagggtaaagttggaagaaaaaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

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Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 7612694 - 7612452
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7612694 cacagattaagaaatagaatgaaataatcattggatataacgcttt-actaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 7612596  T
Q  111 attatgt--gagaaaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||| ||| |         ||||||||||||||||  |||| |||| ||||||||| ||||||||||||||||||||||| ||||||    
T  7612595 attgtgtgagagaaaagttggagtatttatttagggtaaagttggaagagaaaacttaatgttgtattgaaaatgtaaagtgacattcattttaaaacaa 7612496  T
Q  200 annnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
             |||||||||||||||||||||||| ||||| ||||    
T  7612495 tttttttttgttaaagtgacactcattttaaaagggagggagta 7612452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 1774085 - 1774251
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattgg 169  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  |||||||| | | ||| ||||||||||||| ||||||||||||||||||||     
T  1774085 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtaagagaaaagttagagagcgtaaagttggaagaaaaaaattaaagttgtattga 1774184  T
Q  170 aaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacgga 236  Q
    ||||||||| ||||||||||||| ||||||        || ||||||||||||||||||||||||||    
T  1774185 aaatgtaaattgacattcattttaaaacaattttttttggctaaagtgacactcattttaaaacgga 1774251  T

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Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 243
Target Start/End: Complemental strand, 22601315 - 22601090
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga-aaaga 126  Q
    ||||||||||||||| || ||||| ||||||| ||| || | ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||     
T  22601315 aatgaaataatcattagacataactcttttactaaattgtctttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaagg 22601216  T
Q  127 tggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagt 216  Q
    | ||          ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||    
T  22601215 ttggagtatttatcgagggtaaagttggaag-aaacaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaaactttttggctaaagt 22601117  T
Q  217 gacactcattttaaaacggaggaagta 243  Q
    ||||||||| || ||||||||| ||||    
T  22601116 gacactcatcttgaaacggagggagta 22601090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 45187251 - 45187440
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| || || |||||||||| |||||| ||||  ||||||||||||||||||| |||||||||| ||||||    
T  45187251 cacagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaaagacaaacttaaagttgctttgaaa 45187350  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    ||| || |||||||| | | |||| ||| |||  ||| |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  45187351 attgtgagagaaaagttagagaggataatgttaaaagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 45187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 29931224 - 29931386
Alignment:
Q  39 cattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaagatggggagggt 136  Q
    ||||| ||||||||||||||  |||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||  |||||||| | | ||| ||    
T  29931224 cattgaatataacacttttattaaactgcctttattttataagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtttgagagagt 29931323  T
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  29931324 aaagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaacaa 29931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 27109775 - 27109976
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||| ||| || | || |||||||||||||| |||||| |||||||||||||| |    
T  27109775 cacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttttactttataagaaaaggacaaacttaaagttgcattgga 27109874  T
Q  110 aattatgtgaga--aaagatgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| |||||||  |||| | | |         |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27109875 aattgtgtgagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatggaaagtgacattcattttgaaaca 27109974  T
Q  199 aa 200  Q
    ||    
T  27109975 aa 27109976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 9022593 - 9022348
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaatt-aaagttgcattgaa 109  Q
    |||||||||| |||| ||||||| |||||||| || ||||||||||||| ||||||| |||  |||||| |||||||||||| || ||||||||||||||    
T  9022593 cacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcacttgttttatatgaaaaagacaaacttaaaagttgcattgaa 9022494  T
Q  110 aattatgtgag--aaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| ||||||  ||||| |||          ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9022493 aattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaacgtaaagtgacattcattttaaaaca 9022394  T
Q  199 aannnnnnnggttaaagtgacactcattttaaaacggaggaagtag 244  Q
    |        || |||| ||| ||||||||||||||||||| |||||    
T  9022393 attctttttggctaaaatgatactcattttaaaacggagggagtag 9022348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 38329010 - 38329221
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||| |||||||||||||||| || ||||||||||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||    
T  38329010 cacagattaaggaatggaatgaaataatcattagacataacacttttactaaactg-ccttactttataatcaaaagacaaacttaaagttgcattgaaa 38329108  T
Q  111 attatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggt 210  Q
    ||| |||             ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||       |      
T  38329109 attgtgt-------------gagggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaacaaatttttttgac 38329195  T
Q  211 taaagtgacactcattttaaaacgga 236  Q
    |||||||||||||||||| |||||||    
T  38329196 taaagtgacactcattttgaaacgga 38329221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 16209102 - 16208951
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggggagggtaaagttgg 144  Q
    ||||||||||||  || ||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||  |||| ||  ||||||||| ||      
T  16209102 ataacacttttattaatctgtccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagttgtagagggtaaaattta 16209003  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16209002 aagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaa 16208951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 36915561 - 36915365
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaa 111  Q
    |||||||||| ||| |||||||||||||||| || |||| | |||||| ||| |||||||  |||||| |||||||||||| ||||||||||||||||||    
T  36915561 acagattaaggaatggaatgaaataatcattagacataatatttttactaaattgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaa 36915462  T
Q  112 ttatgtgagaaaagatggggag-----------ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||  ||||||||| |||  ||            |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36915461 tt--gtgagaaaaaatgttgaatatttattgaaggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaacaa 36915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 198
Target Start/End: Complemental strand, 30789115 - 30788934
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 125  Q
    ||||||||||||||| || ||||||||||||  ||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  30789115 aatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaaaag 30789016  T
Q  126 atgggg---------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
     ||| |         ||||||||||| |||| |||||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  30789015 ttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaaca 30788934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 6839404 - 6839215
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| |||||||||||||||| || ||||||||||||| ||| |||| |||||||||||||||||||||||  |||| |||||||||||    
T  6839404 cacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgcattgaaa 6839305  T
Q  111 attatgt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||  |||||||| |||  | | |||||||  ||  |||||||||||||| | ||  ||||||||||| | ||||||||| ||||||    
T  6839304 attatgtgagagaaaagttggaaatgataaagtt-aaaaaaaaaaattaaagttattttaaaaatgtaaagtaaaattcattttaaaacaa 6839215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 34168224 - 34168355
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga-----tggggagggtaaagttggaaggaaaaaattaaagtt 162  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||     |   ||||||||||||||||| ||||| ||||||||    
T  34168224 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaagagtatttcttgagggtaaagttggaagaaaaaagttaaagtt 34168323  T
Q  163 gtattggaaatgtaaagtgacattcattttga 194  Q
    |||||| |||||||||||||||||||||||||    
T  34168324 gtattgaaaatgtaaagtgacattcattttga 34168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 2067894 - 2067788
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||  ||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  2067894 agattaagaaatggaatgaaataatcatttgatataacgcttttattaaactgcccttactttataaggaaaagaccaaattaaagttgcattaaaaatt 2067795  T
Q  114 atgtgag 120  Q
     ||||||    
T  2067794 gtgtgag 2067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 236
Target Start/End: Complemental strand, 7129476 - 7129262
Alignment:
Q  14 agattaagaaattgaatgaaata-----atcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 108  Q
    |||||||||||| ||||||||||     ||||||| ||||||| ||||||| ||||||   |||||||||||||| |||||||||||||||||||||||     
T  7129476 agattaagaaatggaatgaaatagtataatcattgaatataacgcttttactaaactgattttactttataagaataagacaaaattaaagttgcattgg 7129377  T
Q  109 aaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnng 208  Q
    ||||| |||||||             | ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||             
T  7129376 aaattgtgtgaga-------------gaaaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaataattttttttt 7129290  T
Q  209 gttaaagtgacactcattttaaaacgga 236  Q
    |||||||||||||||||||| |||||||    
T  7129289 gttaaagtgacactcattttgaaacgga 7129262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 32326680 - 32326875
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| ||  |||||||||||| |||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  32326680 cacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgcccttgttttatatgaaaaagacaaatttaaagttgcattgaaa 32326779  T
Q  111 attatgtgagaaaagatgggga-----------gggtaaagttggaagg-aaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||| |||||||||| |   |||           ||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  32326780 attgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaattaaagttgtattgaaaatgtaaagtgacatttattttga 32326875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 18666534 - 18666672
Alignment:
Q  45 atataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttgg 144  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||||| |||||| |||||||             | ||||||||    
T  18666534 atataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgaga-------------gaaaagttgg 18666620  T
Q  145 aaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  18666621 aagaaaaaaactaaagttgcattggaaatgtaaagtgacattcattttgaaa 18666672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 8471399 - 8471279
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtatt 167  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |           | ||||||||||| ||||||||||||||| |||    
T  8471399 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga-----------gaaaagttggaagaaaaaaattaaagttgcatt 8471311  T
Q  168 ggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| |||||||||||||||||||    
T  8471310 ggaaatgtaaagcgacattcattttgaaacaa 8471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 14541737 - 14541900
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatgggg---------aggg 135  Q
    |||||| |||||| ||| |  |||||||||||||||| |||||||| |||||||||||||||||||| || ||||  |||| ||  |         |||     
T  14541737 ataacaattttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaagga 14541836  T
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14541837 taaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaacaa 14541900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 11335994 - 11336098
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||  |||||| ||| |||| |||||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||||    
T  11335994 cacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaa------ttactttataagaaaaagacaaaattaaagttgcattgaaa 11336087  T
Q  111 attatgtgaga 121  Q
    ||| |||||||    
T  11336088 attgtgtgaga 11336098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 240
Target Start/End: Complemental strand, 41415012 - 41414799
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaaga- 126  Q
    ||||||||||||||| ||  |||||||||||| || ||||||||| ||||||| ||||  | ||  |||||||||||||||||||| |||||||||| |     
T  41415012 aatgaaataatcattagacgtaacacttttactaa-ctgcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaag 41414914  T
Q  127 -tggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcat 225  Q
     || ||| |||||| ||||||| |||||||||||||  ||||  |||| |||||||||||| ||||| ||| |||       || ||||| |||||| ||    
T  41414913 ttgaggaaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttattttaaaataaatatttttggctaaagagacacttat 41414814  T
Q  226 tttaaaacggaggaa 240  Q
    ||||||| |||||||    
T  41414813 tttaaaatggaggaa 41414799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 199
Target Start/End: Complemental strand, 156358 - 156239
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaa 178  Q
    ||||||| |||||| ||||||||| |||||||||| || |||| || | | |||  |||||||||| || |||||||||||||| |||||| ||||||||    
T  156358 aagaaaaggacaaacttaaagttgtattgaaaattgtgcgagagaaaa-gtggaaagtaaagttgggagaaaaaaattaaagttatattgggaatgtaaa 156260  T
Q  179 gtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||    
T  156259 gtgacattcattttgaaacaa 156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 32737961 - 32737859
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||   ||||||||| ||||||||||||||||||| ||| ||||| |||||||||||    
T  32737961 acagattaagaaattgaatgaaat-atcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaa-ttgcattgaaa 32737864  T
Q  111 attat 115  Q
    |||||    
T  32737863 attat 32737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 2803268 - 2803393
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagatggggagggtaaagttggaag---gaaaaaattaaagttgtattggaaatg 174  Q
    ||||||||||||||| ||||||||| |||||||||| ||  ||| || |   ||||||||||||||| ||   |||||||||||| |||||||| |||||    
T  2803268 taagaaaaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagttggagggtaaagttgggagggagaaaaaattaaaattgtattgaaaatg 2803367  T
Q  175 taaagtgacattcattttgaaacaaa 200  Q
    |||||||||||| |||||||||||||    
T  2803368 taaagtgacatttattttgaaacaaa 2803393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 34461670 - 34461737
Alignment:
Q  131 gagggtaaagttggaaggaaaa-aattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34461670 gagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 34461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 24732144 - 24732079
Alignment:
Q  12 acagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttacttta 77  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  24732144 acagattaagaaattgaatgaaatagtcattggatataacacttttactaaactgcccctacttta 24732079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 195
Target Start/End: Original strand, 41790113 - 41790268
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagaaaagat 127  Q
    ||||||||||||||| || |||| |||||||  ||| || | || |||||||||||||||||||| ||||||||| |||||||||| |||||||          
T  41790113 aatgaaataatcattagacataatacttttattaaattgtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgaga------ 41790206  T
Q  128 ggggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
           | ||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41790207 -------gaaaagttgaaagaaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaa 41790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 26439102 - 26438980
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaagatggggagggtaaagttggaag-gaaaaaattaaagttgtat 166  Q
    ||||||||||| |||||  |||| |||||||||||||||||||| |||  |||||||| | | |||| ||||||||||||  |||||||||||||||||     
T  26439102 ttactttataacaaaaa--caaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagaggataaagttggaagaaaaaaaattaaagttgta- 26439006  T
Q  167 tggaaatgtaaagtgacattcatttt 192  Q
    ||||||||||||||| ||||||||||    
T  26439005 tggaaatgtaaagtggcattcatttt 26438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 3095590 - 3095656
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  3095590 gagggtaaagttgggaggaaaaaattaaagttgtattgaaaatgtaaagtaacattcattttaaaac 3095656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 5588563 - 5588628
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  5588563 ggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaacaa 5588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 11257736 - 11257540
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| |||||||||| |||||||||||| |||  | | |||| |||||| ||||| || ||| ||||||||||| ||||||| |||||||||||||||||    
T  11257736 cacaaattaagaaatggaatgaaataattattaaaaa-aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaa 11257638  T
Q  111 attatgt--gagaaaagatg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||| |||  |||||||| ||           |||  ||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  11257637 attgtgtgagagaaaagttgaagtatttattgagattaaagttggaag--aaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 11257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 33870817 - 33870724
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattt 227  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||| |||       |||||||| |||||||||||    
T  33870817 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccattttgaaataaattattttggttaaagcgacactcattt 33870724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 27416565 - 27416502
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27416565 gagggtaaagttggacg--aaaaactaaagttgtattggaaatgtaaagtgacattcattttgaaa 27416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 8382564 - 8382625
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||    
T  8382564 gagggtaaagttgagagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 8382625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 39970390 - 39970323
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| || |||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  39970390 gagggtaaagttgggag-aaaaaactaatgttgtattggaaatgtaaagtaacattcattttgaaacaa 39970323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 8107191 - 8107304
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattatgtgaga--aaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgt 175  Q
    ||||||||||||||| ||||||||  |||||||||| | |||||  |||| ||| |||  |||| ||  ||  |||||||||||||||||||| ||||||    
T  8107191 taagaaaaagacaaatttaaagttctattgaaaattgtctgagagaaaagttggagagaataaaatttaaaaaaaaaaattaaagttgtattgaaaatgt 8107290  T
Q  176 aaagtgacattcat 189  Q
    ||||||||||||||    
T  8107291 aaagtgacattcat 8107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 35052531 - 35052469
Alignment:
Q  137 aaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  35052531 aaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaacgacattcattttaaaacaa 35052469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 32661371 - 32661310
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| ||| |||||||||||    
T  32661371 gagggtaaagttgggagaaaaaaattaaagttgtattgaaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 32061515 - 32061612
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaac 233  Q
    |||||||||||| ||| ||||||| |||||| | ||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||    
T  32061515 taaagttggaagaaaataattaaatttgtatagaaaatgtaaagtgacattcattttaaaacaattttttttatttaaagtgacactcattttaaaac 32061612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 42946188 - 42946120
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| ||| ||| |||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  42946188 gagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaacaa 42946120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 5588426 - 5588512
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagtt 101  Q
    ||||||||||||  |||||||||||||||  | |||||| |||||| |||||| ||| | ||||||||||||||||||| ||||||||    
T  5588426 agattaagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagtt 5588512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 18673189 - 18673247
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| ||||||||||||| | |||| |||||||||| ||||||||||||    
T  18673189 ggtaaagttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcatttt 18673247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 2812968 - 2812915
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc 69  Q
    |||||| |||||||||||||||||||| || ||||||||||||| |||||||||    
T  2812968 attaagtaattgaatgaaataatcattagacataacacttttactaaactgccc 2812915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 13109045 - 13108989
Alignment:
Q  139 agttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaa 196  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  13109045 agttggaag-aaaaaattaaagttgcattgaaaatgtaaaatgacattcattttgaaa 13108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 27416643 - 27416593
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtg 118  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||| ||||    
T  27416643 ccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtg 27416593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 42709949 - 42710046
Alignment:
Q  15 gattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    |||||||||||| ||| |||| |||||| || || ||||||  || |||||  ||||||||||| | ||||||| |||||||||||||| |||||||||    
T  42709949 gattaagaaattaaataaaattatcattagacatgacacttg-actaaactatccttactttattaaaaaaagataaaattaaagttgcgttgaaaatt 42710046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 2812858 - 2812817
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcatt 190  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  2812858 aaaaaattaaagttgtattggaaatgtaaagcaacattcatt 2812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 13109129 - 13109076
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||| ||||||||||||||||||| ||||| ||||||| |||||| |||||||    
T  13109129 ccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgaga 13109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 39970496 - 39970412
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||||||| || ||| ||||||||| |||||||||         |||||||||||||| |||||||||||||||||||| || ||||    
T  39970496 aatgaaataatcattagacataccacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga 39970412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 5044218 - 5044290
Alignment:
Q  47 ataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtga 119  Q
    |||| |||||||  ||||||| |||||||||||| ||||| ||||| ||||||||| ||| |||||| |||||    
T  5044218 ataatacttttattaaactgctcttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtga 5044290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 34461595 - 34461647
Alignment:
Q  69 cttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||| | ||| |||||||| |||||||||||||||||||| |||||||    
T  34461595 cttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgaga 34461647  T

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Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 3203368 - 3203325
Alignment:
Q  156 taaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||    
T  3203368 taaagttgcattgaaaatgtaaagtgacatttattttgaaacaa 3203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 121
Target Start/End: Complemental strand, 35052603 - 35052560
Alignment:
Q  78 taagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||    
T  35052603 taagaaaaagataagtttaaagttgcattgaaaattatgtgaga 35052560  T

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Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 43938168 - 43938125
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||    
T  43938168 aaaaaattaaagttctattcgaaatgtaaagtggcattcatttt 43938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 2067770 - 2067725
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaa 195  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  2067770 aaaaaattaaaattgtattgaaaatgtaaa-tgacattcattttgaa 2067725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 200
Target Start/End: Complemental strand, 11335869 - 11335839
Alignment:
Q  170 aaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||||||||||||||||||||    
T  11335869 aaatgtaaagtgacattcattttgaaacaaa 11335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32061414 - 32061468
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaact 65  Q
    |||| |||||||||||||| |||||||||||  || ||||||||||||| |||||    
T  32061414 cacatattaagaaattgaacgaaataatcatcagacataacacttttactaaact 32061468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 3095468 - 3095525
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc 68  Q
    |||| ||||| |||| ||||||||||||||||  |||| |||||||||| ||||||||    
T  3095468 cacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgcc 3095525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 11165514 - 11165482
Alignment:
Q  211 taaagtgacactcattttaaaacggaggaagta 243  Q
    |||||||||||||||||||||||||||| ||||    
T  11165514 taaagtgacactcattttaaaacggagggagta 11165482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 1924634 - 1924862
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattat 115  Q
    ||||||||||  ||||||||||||||||||||||||  |||||| ||||| | ||||||||||||| |||| |||||||||||||||||||||||||| |    
T  1924634 attaagaaatataatgaaataatcattggatataacgtttttactaaacttctcttactttataaggaaaatacaaaattaaagttgcattgaaaattgt 1924733  T
Q  116 gt--gagaaaagatggggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaa 213  Q
    ||  |||||||| ||| |||||| ||||| |||  |||||||||||||||||||| ||||||||| ||||||||||||| |||||||       || |||    
T  1924734 gtgagagaaaagttggagagggtgaagtt-gaaaaaaaaaattaaagttgtattgaaaatgtaaaatgacattcattttaaaacaaatttttttggctaa 1924832  T
Q  214 agtgacactcattttaaaacggaggaagta 243  Q
    ||||||||||||||| |||| |||| ||||    
T  1924833 agtgacactcattttgaaacagagggagta 1924862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 12828653 - 12828835
Alignment:
Q  28 aatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt--gagaaaag 125  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||  ||||||||    
T  12828653 aatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaag 12828752  T
Q  126 atg---------gggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
     ||           ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12828753 ttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcattttgaaacaa 12828835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 26669056 - 26669247
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||||||||||| ||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26669056 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 26669155  T
Q  114 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||  |||||||| |||          |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  26669156 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 26669247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 29915740 - 29915539
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcc-cttactttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| ||||||||||||||||||||||| ||| || ||||||||||||| ||||||||  |||||||||||||||||||||||  ||||||||||||| |    
T  29915740 cacatattaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcattgga 29915641  T
Q  110 aattatgt--gagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    |||| |||  |||||||| |||          |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915640 aattgtgtgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 29915541  T
Q  198 aa 199  Q
    ||    
T  29915540 aa 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 29927405 - 29927205
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| |||||||||||||||| || ||||||||||||| ||  |  ||||||||||||||||||||||||| |||||||||||||||||    
T  29927405 cacagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattgaaa 29927306  T
Q  111 att--atgtgagaaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    | |  ||| |||||||| |||          |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29927305 actacatgagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 29927206  T
Q  199 a 199  Q
    |    
T  29927205 a 29927205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 31275596 - 31275796
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| ||   |||||||||| |||| ||  ||||||||||||||||||||||||  |||||| |||||||||||| |||||||||||||||||    
T  31275596 cacagattaaggaaagaaatgaaataaccattagacgtaacacttttaccaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaa 31275695  T
Q  111 attatgtgag--aaaagatgg---------ggagggtaaagttggaag-gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||| ||||||  ||||| |||          |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31275696 attgtgtgagaaaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 31275795  T
Q  199 a 199  Q
    |    
T  31275796 a 31275796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 23936538 - 23936735
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgccctt-actttataagaaaaagacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||||||||||||||| ||||||||| ||||||  || ||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  23936538 cacatattaagaaatggaatgaaataatcattagatataacatttttactgaattgccctttactttataagaaaaaaacaaatttaaagttgcattgaa 23936637  T
Q  110 aattatgtgagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||| || |||||| | |||          ||||||||||||||||| ||||||| ||||||| |||| ||||||||||| |||||||||||||||||    
T  23936638 aattgtgagagaaaggttggagtatatattgagggtaaagttggaagaaaaaaatgaaagttgcattgaaaatgtaaagtaacattcattttgaaaca 23936735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 32258910 - 32258676
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||||| ||||||||           |||||||||||||||||||    
T  32258910 cacagattaagaaatcgattgaaataatcattggatataacgcttttactaaactgcccttgctttataa-----------aattaaagttgcattgaaa 32258822  T
Q  111 attatgtgaga---aaagatgggg----------agggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||||||   |||| ||| |          ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32258821 attgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaac 32258722  T
Q  198 aaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    ||         |||||||| |||||||| |||||||||||| ||||    
T  32258721 aatttttttttgttaaagtaacactcatcttaaaacggaggtagta 32258676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 34439368 - 34439607
Alignment:
Q  16 attaagaaattgaatgaaataatcattggatataacacttttaccaaactgccc-ttactttataagaaaaagacaaaattaaagttgcattgaaaatta 114  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||  ||| ||||| ||| |||||||||||||||||||  ||||||||||||| |||||     
T  34439368 attaagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttattttataagaaaaagacaaacataaagttgcattggaaattg 34439467  T
Q  115 tgt--gagaaaaga-----tgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    |||  |||||||||     |||          || ||||||||||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  34439468 tgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaa-gaaagaatgaaagttgtattggaaatgtaaaatgacattcattttgaaaca 34439566  T
Q  199 aannnnnnnggttaaagtgacactcattttaaaacggagga 239  Q
    |        | ||||||||||| ||||||||||||||||||    
T  34439567 attttttttgattaaagtgacattcattttaaaacggagga 34439607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 4123941 - 4124009
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4123941 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttgaaacaa 4124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 11785189 - 11785255
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11785189 gagggtaaagttggaag-aaaaaattaaagttgtattggaaatgtaaagtgaca-tcattttgaaacaa 11785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 17345146 - 17345290
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    |||||||||||||||| |||||||| || ||||||||||||||||| |||||||    |||| ||| |         |||||||||||||||| |||| |    
T  17345146 ccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaata 17345245  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||    
T  17345246 ttaaagttgtattagaaatgtaaagtgatattcattttaaaacaa 17345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 6143147 - 6143082
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  6143147 ggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaatgacattcattttaaaacaa 6143082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 4132061 - 4132129
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  4132061 gagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaacaa 4132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 26189574 - 26189469
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||   ||||||||||||||||||        |||||||| |||||||||||| |    
T  26189574 gagggtaaagttggaagaaaaatattaaagttgcattggaaatgtaaaacaacattcattttgaaacaattttttttggttaaagcgacactcattttga 26189475  T
Q  231 aacgga 236  Q
    ||||||    
T  26189474 aacgga 26189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 34576610 - 34576542
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  34576610 gaggataaagttggaagaaaaaaattaaagttgtattggaaatgtaaaatgatattcattttaaaacaa 34576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 6140662 - 6140598
Alignment:
Q  134 ggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  6140662 ggtaaagttggaag-aaaaaattaaagttgaattggaaatgtaaagcgacattcattttaaaacaa 6140598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 199
Target Start/End: Original strand, 10494760 - 10494916
Alignment:
Q  55 tttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaaaatt--atgtgagaaaagatgggga---------gggtaaagtt 142  Q
    ||||| ||||| |||||||||||||||||||| |||||| || |||||||||||||||||  ||| |||||||| |||            ||| ||||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgagagaaaagttggactatttattttgggcaaagtt 10494859  T
Q  143 ggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    | ||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  10494860 gaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaacaa 10494916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 30627157 - 30627088
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||||  || |||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  30627157 gagggtaaagttgagagaaaaaaattaaagttgtattgaaaatataaagtgacatttattttgaaacaaa 30627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 226
Target Start/End: Complemental strand, 8052410 - 8052316
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcatt 226  Q
    ||||||||| |||| || ||||||||||||||||||| ||||| |||||||||||||||||| ||||||        |||||||||||||||||||    
T  8052410 gagggtaaaattgggag-aaaaaattaaagttgtattagaaatataaagtgacattcattttaaaacaatgtttttgggttaaagtgacactcatt 8052316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 3015964 - 3015919
Alignment:
Q  149 aaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3015964 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttga 3015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 30626918 - 30626867
Alignment:
Q  148 gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  30626918 gaaaaaattaaagttgtattgaaaatgtaaagtaatatttattttgaaacaa 30626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 34576684 - 34576633
Alignment:
Q  70 ttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||| ||||| |||||||| |||||||||||||||||||| |||||||    
T  34576684 ttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgaga 34576633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 4131903 - 4132008
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||||||||  ||| |||||||||||  |||||||| |||||| ||||| || ||| |||||||||||||   |||| | || |||||||||||    
T  4131903 cacatattaagaaataaaattaaataatcattatatataacatttttactaaactacctttattttataagaaaaa---aaaacttaaattgcattgaaa 4131999  T
Q  111 attatgtga 119  Q
    ||| |||||    
T  4132000 attgtgtga 4132008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 19689927 - 19689989
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaa 200  Q
    |||||||||||| ||| |  |||||||||||| |||||||||||| ||||||||||| |||||||    
T  19689927 taaagttggaagaaaata--taaagttgtattagaaatgtaaagtaacattcattttaaaacaaa 19689989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 6992543 - 6992508
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgc 103  Q
    ||||||||||||||||||||||||| ||||||||||    
T  6992543 ccttactttataagaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 26189651 - 26189600
Alignment:
Q  68 ccttactttataagaaaaaga-caaaattaaagttgcattgaaaattatgtg 118  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||| ||||    
T  26189651 ccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtg 26189600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 19416887 - 19416857
Alignment:
Q  169 gaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||||||||||||||||||||||    
T  19416887 gaaatgtaaagtgacattcattttgaaacaa 19416857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 19689809 - 19689858
Alignment:
Q  18 taagaaattgaatgaaataatcattggatataacacttttaccaaactgc 67  Q
    |||||||| |||||||||||| ||| ||||||||| |||||| |||||||    
T  19689809 taagaaatggaatgaaataattattagatataacaattttactaaactgc 19689858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 25932771 - 25932718
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    ||||||||||||  || |||||||| |||||||| ||||||||||| |||||||    
T  25932771 ccttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgaga 25932718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 1737 - 1546
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 113  Q
    ||||||||||||  ||||||||||| ||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1737 agattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1638  T
Q  114 atgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttga 194  Q
    ||||  |||||||| |||          |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||    
T  1637 atgtgagagaaaagttggagattttattgaggataaagttggatgacaaaaattaaagttgtattggaaatataaagtgacattcattttga 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 1768 - 1689
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaa 93  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  1768 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 9507 - 9428
Alignment:
Q  14 agattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaa 93  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  9507 agattaagaaatgaaatgaaataatcattggatataacatttttactaaactgaccttactttataagaaaaagacaaaa 9428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 1691 - 1595
Alignment:
Q  149 aaaaaattaaagttgtatt--ggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||        || |||||||||||||||||| ||||||||| ||||    
T  1691 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggagta 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9430 - 9334
Alignment:
Q  149 aaaaaattaaagttgtatt--ggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaaaacggaggaagta 243  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||        || |||||||||||||||||| ||||||||| ||||    
T  9430 aaaaaattaaagttgtattttggaaatgtaaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggagta 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 70465 - 70609
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga----aaagatgggg---------agggtaaagttggaaggaaaaaa 154  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    |||| ||| |         |||||||||||||||| ||||||    
T  70465 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 70564  T
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  70565 ttaaagttgcattgaaaatgtaaagtgacattcattttgaaacaa 70609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 4063 - 4263
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaa-gacaaaattaaagttgcattgaa 109  Q
    |||| |||||||||| |||||||| |||||||  | |||||| |||||| ||| || ||||||||||||| ||||| |||||| ||||||||  ||||||    
T  4063 cacatattaagaaatggaatgaaacaatcattatacataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaa 4162  T
Q  110 aattatgt--gagaaaagatgg---------ggagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaaca 198  Q
    ||||||||  |||||||| |||          |||| |||||||||||| ||||||||||| ||||||| |||||||||||| ||||| ||||| |||||    
T  4163 aattatgtgagagaaaagttggagtatttattgaggataaagttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaaca 4262  T
Q  199 a 199  Q
    |    
T  4263 a 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 15995 - 16186
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||| ||||| ||||| |||||||||||||||  |||||||| |||||| ||||| || ||||||||||| |||| |||||| |||||||||||||||||    
T  15995 cacatattaaaaaattaaatgaaataatcattatatataacatttttactaaactacctttactttataa-aaaatgacaaacttaaagttgcattgaaa 16093  T
Q  111 attatgtgaga-aaagatggg----------gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 192  Q
    ||| ||||||| |||| | ||          |||||||||||| |||| |||||||||||||||||||  |||| ||||| |||||| |||||    
T  16094 attgtgtgagagaaaggttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaaaatataaagagacatttatttt 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 13145 - 13250
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaaannnnnnnggttaaagtgacactcattttaa 230  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||| ||||||        ||||||||||||||||||||| |    
T  13145 gagggtaaagttgggagaaaaaaattaaaattgtattggaaatgtaaagtgacgttcattttaaaacaattttttttggttaaagtgacactcattttga 13244  T
Q  231 aacgga 236  Q
    ||||||    
T  13245 aacgga 13250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 13023 - 13116
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    ||||||||||| |||  ||||||||||||||| || ||||||||||||| ||| |||          |||||||||||||||||||||||| ||||||||    
T  13023 cacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgct---------taagaaaaagacaaaattaaagttacattgaaa 13113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 321792 - 321724
Alignment:
Q  131 gagggtaaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  321792 gagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaacaa 321724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 321868 - 321815
Alignment:
Q  68 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||||| ||| |||||||| ||||| |||||||||||||| |||||||    
T  321868 ccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgaga 321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 8346 - 8156
Alignment:
Q  11 cacagattaagaaattgaatgaaataatcattggatataacacttttaccaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaa 110  Q
    |||||||||| |||| ||||||||||||||||||||||||  ||||||| ||||||||||| ||||||           |||||||||||||| ||||||    
T  8346 cacagattaaaaaatggaatgaaataatcattggatataaggcttttactaaactgcccttgctttat-----------aaaattaaagttgctttgaaa 8258  T
Q  111 attatgt--gagaaaagatgg---------ggagggtaaagttggaag--gaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaac 197  Q
    ||| |||  |||||||| |||          |||| |||||||| |||   |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  8257 attgtgtgagagaaaagttggagtattttttgaggttaaagttgaaagaaaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttgaaac 8158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 158229 - 158187
Alignment:
Q  79 aagaaaaagacaaaattaaagttgcattgaaaattatgtgaga 121  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  158229 aagaaaaagacaaacttaaagttgcattgaaaattatgcgaga 158187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 7791 - 7852
Alignment:
Q  136 taaagttggaaggaaaaaattaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    |||||||||||| ||||| | |||||||||||  ||||||||||||||||||||||| ||||||    
T  7791 taaagttggaag-aaaaattaaaagttgtatta-aaatgtaaagtgacattcattttaaaacaa 7852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 31667 - 31623
Alignment:
Q  155 ttaaagttgtattggaaatgtaaagtgacattcattttgaaacaa 199  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||    
T  31667 ttaaaattttattggaaatgtaaagtaacattcattttaaaacaa 31623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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