View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17768_low_12 (Length: 240)
Name: NF17768_low_12
Description: NF17768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17768_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 19214622 - 19214729
Alignment:
| Q |
18 |
tgaattgggattggaattatggttttacttgtacttgtgttgtcgctaatgggtttagtttcccgccatatcaccacttagcttcttgaaaatttcccac |
117 |
Q |
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| T |
19214622 |
tgaattgggattggaattagggttttatttgtatttgtgttgtcgctaatgggtttagtttcccgccatatcaccacttagcttcttgaaaatttcccac |
19214721 |
T |
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| Q |
118 |
ctttcatg |
125 |
Q |
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|||||||| |
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| T |
19214722 |
ctttcatg |
19214729 |
T |
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