View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17769_low_4 (Length: 319)
Name: NF17769_low_4
Description: NF17769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17769_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 39789025 - 39789327
Alignment:
| Q |
1 |
ggatatgggtattgcctttaatgtctaatccacccatttgtttagcacaaattagaagttattgtctttaaagcatgttaataagagtgtgactttgtgg |
100 |
Q |
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| T |
39789025 |
ggatatgggtattgcctttaatgtctaatccacccatttgtttagcacaaattagaagttattgtctttaaagcatgttaataagagtgtgactttgtgg |
39789124 |
T |
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| Q |
101 |
ttttctaagttggaattactatgatctaagtccaataaagctggaagataaatacaagacatggaactcaatagactataaatagtcacgaatttcattt |
200 |
Q |
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| T |
39789125 |
ttttctaagttggaattactatgatctaagtccaataaagctggaagatgaatacaagacatggaactcaatagactataaatagtcacgaatttcattt |
39789224 |
T |
|
| Q |
201 |
tctaataaaaaatagtcaaatttactaggcctagcctagctactagctttggtaagttaggcatataatgcaagtatttcccctggaagataatgttatt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39789225 |
tctaataaaaaatagtcaaatttactaggcctagcctagctactagctttggtaagttaggcatataatgcaagtatttcccctggaagataatgttatt |
39789324 |
T |
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| Q |
301 |
gtt |
303 |
Q |
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||| |
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| T |
39789325 |
gtt |
39789327 |
T |
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