View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17771_low_5 (Length: 500)

Name: NF17771_low_5
Description: NF17771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17771_low_5
NF17771_low_5
[»] chr3 (40 HSPs)
chr3 (9-206)||(48712892-48713089)
chr3 (204-263)||(996346-996405)
chr3 (205-263)||(12734101-12734159)
chr3 (201-263)||(19253710-19253772)
chr3 (206-263)||(3206457-3206514)
chr3 (202-263)||(10139407-10139468)
chr3 (198-263)||(33808063-33808128)
chr3 (206-263)||(33996752-33996809)
chr3 (205-260)||(16010750-16010805)
chr3 (205-263)||(20498097-20498154)
chr3 (206-263)||(22057651-22057709)
chr3 (201-262)||(51699741-51699802)
chr3 (210-262)||(29029898-29029950)
chr3 (207-263)||(37820738-37820794)
chr3 (204-262)||(29449122-29449180)
chr3 (205-263)||(40246731-40246789)
chr3 (200-261)||(25418248-25418309)
chr3 (204-263)||(6589449-6589509)
chr3 (204-263)||(35337620-35337680)
chr3 (201-262)||(15493993-15494054)
chr3 (206-263)||(52114418-52114475)
chr3 (207-260)||(54625481-54625534)
chr3 (209-260)||(27899277-27899328)
chr3 (205-263)||(23753647-23753705)
chr3 (199-263)||(36674391-36674456)
chr3 (202-263)||(39842690-39842751)
chr3 (210-263)||(48379050-48379103)
chr3 (204-263)||(1440213-1440271)
chr3 (201-263)||(10660417-10660480)
chr3 (208-263)||(18749460-18749515)
chr3 (205-263)||(11431413-11431471)
chr3 (200-262)||(40897025-40897087)
chr3 (204-253)||(19552186-19552235)
chr3 (202-251)||(26006023-26006072)
chr3 (230-263)||(28146287-28146320)
chr3 (206-263)||(45926977-45927034)
chr3 (285-317)||(9196527-9196559)
chr3 (227-263)||(44762298-44762334)
chr3 (207-251)||(50900487-50900531)
chr3 (206-242)||(52079881-52079917)
[»] chr7 (32 HSPs)
chr7 (264-416)||(22007947-22008107)
chr7 (199-263)||(31401579-31401643)
chr7 (204-263)||(44343656-44343715)
chr7 (201-263)||(8078280-8078342)
chr7 (205-262)||(30440685-30440742)
chr7 (207-263)||(43581350-43581406)
chr7 (204-263)||(34008903-34008962)
chr7 (201-263)||(18914995-18915057)
chr7 (204-263)||(34695119-34695178)
chr7 (209-263)||(727405-727459)
chr7 (209-259)||(20275527-20275577)
chr7 (210-262)||(7719522-7719574)
chr7 (203-263)||(9179763-9179823)
chr7 (207-263)||(31638766-31638822)
chr7 (208-263)||(32143179-32143235)
chr7 (207-263)||(39219595-39219651)
chr7 (205-263)||(12893297-12893355)
chr7 (207-263)||(973074-973131)
chr7 (207-263)||(47879059-47879115)
chr7 (207-263)||(47914157-47914213)
chr7 (210-263)||(43679363-43679417)
chr7 (204-260)||(40996912-40996969)
chr7 (198-263)||(7113335-7113404)
chr7 (204-263)||(7993023-7993082)
chr7 (210-263)||(9882496-9882549)
chr7 (202-263)||(29615024-29615085)
chr7 (200-263)||(23101175-23101238)
chr7 (200-263)||(33892511-33892574)
chr7 (205-263)||(10068348-10068406)
chr7 (205-263)||(28342229-28342287)
chr7 (205-263)||(32883663-32883721)
chr7 (202-263)||(509577-509638)
[»] chr5 (16 HSPs)
chr5 (194-263)||(7016957-7017026)
chr5 (205-263)||(21146955-21147013)
chr5 (207-263)||(27459209-27459265)
chr5 (205-263)||(43319134-43319193)
chr5 (209-262)||(5273223-5273276)
chr5 (199-263)||(33656303-33656368)
chr5 (204-263)||(32158159-32158218)
chr5 (208-261)||(16894121-16894174)
chr5 (207-263)||(6460682-6460738)
chr5 (210-263)||(7948577-7948630)
chr5 (200-263)||(14000365-14000429)
chr5 (204-263)||(22746184-22746243)
chr5 (205-263)||(4550517-4550575)
chr5 (209-263)||(9689553-9689606)
chr5 (210-263)||(37013807-37013860)
chr5 (207-263)||(27786210-27786266)
[»] chr4 (37 HSPs)
chr4 (199-263)||(22201896-22201960)
chr4 (204-263)||(25331017-25331076)
chr4 (207-263)||(24131233-24131289)
chr4 (199-263)||(30009938-30010002)
chr4 (200-263)||(41320632-41320695)
chr4 (201-263)||(42786650-42786713)
chr4 (205-263)||(1044697-1044755)
chr4 (207-262)||(7250035-7250090)
chr4 (209-263)||(31314989-31315043)
chr4 (208-262)||(46635905-46635959)
chr4 (207-263)||(28541587-28541643)
chr4 (204-263)||(40537406-40537465)
chr4 (205-263)||(41881344-41881403)
chr4 (207-263)||(25445983-25446038)
chr4 (216-263)||(32951097-32951144)
chr4 (204-263)||(39479618-39479677)
chr4 (205-263)||(37915672-37915730)
chr4 (208-263)||(1112784-1112838)
chr4 (207-263)||(25504900-25504955)
chr4 (207-263)||(37046713-37046769)
chr4 (207-263)||(55302732-55302788)
chr4 (200-263)||(28847130-28847193)
chr4 (211-250)||(44775947-44775986)
chr4 (205-262)||(19741170-19741226)
chr4 (226-263)||(34228843-34228880)
chr4 (209-262)||(53275727-53275780)
chr4 (200-263)||(5441285-5441349)
chr4 (207-263)||(7007262-7007318)
chr4 (207-251)||(49469210-49469254)
chr4 (30-89)||(25893708-25893767)
chr4 (200-251)||(25935779-25935830)
chr4 (207-262)||(27454352-27454407)
chr4 (201-263)||(27767938-27768001)
chr4 (204-263)||(54341030-54341089)
chr4 (205-263)||(20021231-20021289)
chr4 (205-263)||(23464840-23464900)
chr4 (211-263)||(49835074-49835126)
[»] chr6 (9 HSPs)
chr6 (200-263)||(2300998-2301061)
chr6 (207-263)||(1391513-1391569)
chr6 (205-263)||(6197738-6197796)
chr6 (205-263)||(29076484-29076543)
chr6 (205-263)||(29111457-29111516)
chr6 (201-263)||(7051728-7051790)
chr6 (205-263)||(31895583-31895641)
chr6 (205-262)||(14262694-14262751)
chr6 (202-250)||(34759284-34759332)
[»] chr8 (25 HSPs)
chr8 (205-263)||(24502031-24502089)
chr8 (204-263)||(23115428-23115487)
chr8 (205-263)||(42735537-42735595)
chr8 (202-263)||(7507159-7507220)
chr8 (206-263)||(24214851-24214908)
chr8 (205-263)||(2705079-2705137)
chr8 (205-263)||(26374688-26374746)
chr8 (209-263)||(41478989-41479043)
chr8 (207-263)||(42937250-42937306)
chr8 (205-263)||(26373692-26373751)
chr8 (206-263)||(32711542-32711599)
chr8 (202-260)||(5576884-5576942)
chr8 (191-263)||(8543393-8543466)
chr8 (209-263)||(43959549-43959604)
chr8 (198-251)||(29260316-29260369)
chr8 (210-263)||(32497376-32497429)
chr8 (207-263)||(42938377-42938433)
chr8 (205-263)||(4031518-4031576)
chr8 (205-263)||(9288710-9288768)
chr8 (205-263)||(14782395-14782453)
chr8 (205-263)||(44726070-44726128)
chr8 (202-251)||(1606053-1606102)
chr8 (202-263)||(16362081-16362142)
chr8 (210-259)||(39190035-39190084)
chr8 (200-256)||(41069798-41069854)
[»] chr1 (30 HSPs)
chr1 (201-263)||(6304515-6304577)
chr1 (205-263)||(22183251-22183309)
chr1 (201-263)||(28824633-28824695)
chr1 (202-263)||(953697-953758)
chr1 (205-263)||(19452111-19452169)
chr1 (205-263)||(21222029-21222087)
chr1 (205-263)||(45760271-45760329)
chr1 (206-263)||(35279554-35279611)
chr1 (206-263)||(49198528-49198585)
chr1 (204-263)||(49417964-49418023)
chr1 (205-263)||(730030-730087)
chr1 (205-262)||(33025393-33025450)
chr1 (201-257)||(28541381-28541437)
chr1 (209-263)||(47654614-47654669)
chr1 (205-263)||(50192812-50192870)
chr1 (207-263)||(35679389-35679445)
chr1 (207-263)||(47780502-47780558)
chr1 (205-262)||(14494093-14494147)
chr1 (217-263)||(31572424-31572470)
chr1 (200-263)||(32589215-32589279)
chr1 (198-263)||(6312447-6312513)
chr1 (201-263)||(9577693-9577755)
chr1 (202-262)||(45272465-45272525)
chr1 (199-263)||(46327917-46327981)
chr1 (197-263)||(9322761-9322828)
chr1 (212-263)||(48524208-48524258)
chr1 (210-263)||(15835314-15835367)
chr1 (205-262)||(25612038-25612095)
chr1 (217-262)||(25831168-25831213)
chr1 (207-252)||(34772311-34772356)
[»] chr2 (28 HSPs)
chr2 (197-262)||(9120049-9120114)
chr2 (203-263)||(31170887-31170947)
chr2 (201-263)||(22552026-22552088)
chr2 (205-263)||(24776244-24776302)
chr2 (204-263)||(12407268-12407327)
chr2 (208-263)||(14198839-14198894)
chr2 (208-263)||(44765667-44765722)
chr2 (206-263)||(16269581-16269638)
chr2 (206-263)||(20605042-20605099)
chr2 (201-263)||(305729-305792)
chr2 (204-263)||(26601463-26601522)
chr2 (201-263)||(35316947-35317009)
chr2 (205-263)||(1789331-1789389)
chr2 (205-263)||(378868-378926)
chr2 (206-263)||(43847536-43847593)
chr2 (206-253)||(14920619-14920666)
chr2 (204-263)||(19144912-19144971)
chr2 (200-263)||(28844439-28844502)
chr2 (205-263)||(33135512-33135570)
chr2 (218-263)||(32125152-32125197)
chr2 (211-246)||(5093317-5093352)
chr2 (229-263)||(21987313-21987347)
chr2 (205-263)||(26788673-26788731)
chr2 (205-262)||(3463560-3463617)
chr2 (264-317)||(38951797-38951849)
chr2 (210-263)||(43078569-43078622)
chr2 (211-263)||(28740546-28740598)
chr2 (26-70)||(41725924-41725968)
[»] scaffold0113 (1 HSPs)
scaffold0113 (199-263)||(39114-39178)
[»] scaffold0037 (1 HSPs)
scaffold0037 (204-263)||(100098-100157)
[»] scaffold0651 (1 HSPs)
scaffold0651 (209-263)||(8654-8708)
[»] scaffold0151 (1 HSPs)
scaffold0151 (207-263)||(38781-38837)
[»] scaffold0400 (1 HSPs)
scaffold0400 (205-262)||(15295-15349)
[»] scaffold0365 (1 HSPs)
scaffold0365 (205-262)||(15938-15992)
[»] scaffold0004 (1 HSPs)
scaffold0004 (207-253)||(102026-102072)
[»] scaffold0922 (1 HSPs)
scaffold0922 (201-263)||(4083-4146)
[»] scaffold0016 (1 HSPs)
scaffold0016 (205-251)||(81822-81868)
[»] scaffold0543 (1 HSPs)
scaffold0543 (210-263)||(10453-10506)
[»] scaffold0492 (1 HSPs)
scaffold0492 (210-263)||(12034-12087)
[»] scaffold1504 (1 HSPs)
scaffold1504 (210-262)||(756-808)


Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-100; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 9 - 206
Target Start/End: Original strand, 48712892 - 48713089
Alignment:
Q  9 cataggtcaagaaagtttttgatttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccctccgtcaaaatttgatgtta 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48712892 cataggtcaaaaaagtttctgatttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccctccgtcaaaatttgatgtta 48712991  T
Q  109 gaaattatgacgtggtgcgttaattgaacatgccacattgtatgttatcctgcgtcaatgtaaactcatcatggactaattagcctacgaaatttagg 206  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48712992 gaaattatgacgtggtgcgttaattgaacatgccgcattgtatgttatcctgcgtcaatgtaaactcatcatggactaattagcctacgaaatttagg 48713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 996405 - 996346
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  996405 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 996346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 12734159 - 12734101
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12734159 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 12734101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 19253710 - 19253772
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19253710 tttagggggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 19253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 3206514 - 3206457
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 3206457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 10139468 - 10139407
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  10139468 ttagggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaag 10139407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 33808128 - 33808063
Alignment:
Q  198 aaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  33808128 aaatgtagggggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaag 33808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 33996809 - 33996752
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33996809 ggggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaag 33996752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 16010750 - 16010805
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 260  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  16010750 gggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 20498097 - 20498154
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  20498097 gggggtgtattggatcatgattctaagggattttaaaagac-tttttatcatgaaaaag 20498154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 22057651 - 22057709
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 22057709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 51699802 - 51699741
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  51699802 tttagggggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaa 51699741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 29029898 - 29029950
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaa 29029950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 37820794 - 37820738
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaag 37820738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 29449180 - 29449122
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||    
T  29449180 agggggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaa 29449122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 40246731 - 40246789
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||    
T  40246731 gggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaag 40246789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 25418248 - 25418309
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaa 261  Q
    ||||||||||| |||||||||||||||||||  |||||||||| | ||||||||||||||||    
T  25418248 atttagggggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaa 25418309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 6589449 - 6589509
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    ||||| ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  6589449 aggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaag 6589509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 35337620 - 35337680
Alignment:
Q  204 agggggtgtattgga-tcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||    
T  35337620 agggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaag 35337680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 15494054 - 15493993
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||| |||||||||| || ||||||| ||||||||||||||||||| || ||||||||    
T  15494054 tttaggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaa 15493993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 52114418 - 52114475
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||| |||||||||||||||| | ||||||||||| ||||||||||||| ||||    
T  52114418 ggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaag 52114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 54625481 - 54625534
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 260  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaa 54625534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 27899277 - 27899328
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 260  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||    
T  27899277 gtgtattagattatgattctaaatgattttaaaagacttttttattatgaaa 27899328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 23753705 - 23753647
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  23753705 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaag 23753647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 36674456 - 36674391
Alignment:
Q  199 aatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  36674456 aatttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 36674391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 39842751 - 39842690
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  39842751 ttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 39842690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 48379050 - 48379103
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||| |||||||||||||||||||| || || ||||||    
T  48379050 tgtattggattatgattctataggattttaaaagactttttaattatcaaaaag 48379103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 1440271 - 1440213
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| |||||||| ||||||||||||  |||||||||| || |||||||||||||||||    
T  1440271 aggggatgtattgggtcatgattctaagagattttaaaatac-tttttatcatgaaaaag 1440213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 10660417 - 10660480
Alignment:
Q  201 tttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  10660417 tttagggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaag 10660480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 18749460 - 18749515
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||| | ||||||| || ||||||||||||||||| || |||||||||    
T  18749460 ggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaag 18749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 11431413 - 11431471
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | ||||||| | |||||||||||||||||| || |||||||||    
T  11431413 ggggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaag 11431471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 40897025 - 40897087
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    ||||||||| |||||||||| | |||||||  ||||||||||| ||||||| || ||||||||    
T  40897025 atttaggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaa 40897087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 19552235 - 19552186
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttat 253  Q
    ||||||||||||||||   |||| ||||||||||||||||| ||||||||    
T  19552235 agggggtgtattggattgagattttaaaggattttaaaagatttttttat 19552186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 26006072 - 26006023
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  26006072 ttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 26006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 28146320 - 28146287
Alignment:
Q  230 aaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| |||||||||    
T  28146320 aaggattttaaaagacttttttatgatgaaaaag 28146287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 45927034 - 45926977
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||   |||| ||||||||||||||||||||||| || || ||||||    
T  45927034 ggggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaag 45926977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 9196527 - 9196559
Alignment:
Q  285 ttttattacttatttttgttcacaattccaatt 317  Q
    ||||||| |||||||||||||||||||||||||    
T  9196527 ttttatttcttatttttgttcacaattccaatt 9196559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 44762334 - 44762298
Alignment:
Q  227 ctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||||||||||||||| |||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaag 44762298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 50900531 - 50900487
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    ||||||||||||| | ||||  |||||||||||||||||||||||    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagactttttt 50900487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 52079881 - 52079917
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaa 242  Q
    |||||||||||||||||||||||||  ||||||||||    
T  52079881 ggggtgtattggatcatgattctaagtgattttaaaa 52079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 9e-28; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 22007947 - 22008107
Alignment:
Q  264 acagtaagattttagggtggtttttattacttatttttgttcacaattccaattcc--------aannnnnnnngtaggtgtttaaggattctgccgtgg 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||          |         |||| |||||||| ||||||||||||    
T  22007947 acagtaagattttagggtggtttttattacttatttttgttcacaattccatttttttttgtagatttctttatgtagatgtttaagaattctgccgtgg 22008046  T
Q  356 tgtgtttggagtttaggtgtcatgttaggtctaatttacattttgttttgcctatcttcgt 416  Q
     |||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||||    
T  22008047 cgtgttttgagttttggtgtcatgttaggtcttatttgcattttgttttgcctatcttcgt 22008107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 31401579 - 31401643
Alignment:
Q  199 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  31401579 aatttagggggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaaag 31401643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 44343715 - 44343656
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44343715 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 44343656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 8078280 - 8078342
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8078280 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaag 8078342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 30440685 - 30440742
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30440685 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaa 30440742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 43581406 - 43581350
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaag 43581350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 34008903 - 34008962
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  34008903 agggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 34008962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 18915057 - 18914995
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  18915057 tttagggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaag 18914995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 34695119 - 34695178
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  34695119 agggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaag 34695178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 727405 - 727459
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaag 727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 20275577 - 20275527
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaa 259  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaa 20275527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 7719574 - 7719522
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaa 7719522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 9179763 - 9179823
Alignment:
Q  203 tagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||    
T  9179763 tagggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaag 9179823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 31638766 - 31638822
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaag 31638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 32143235 - 32143179
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 32143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 39219651 - 39219595
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaag 39219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 12893297 - 12893355
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||| |||||||||||    
T  12893297 gggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaag 12893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 973074 - 973131
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaag 973131  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 47879059 - 47879115
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaag 47879115  T

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Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 47914157 - 47914213
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaag 47914213  T

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Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 43679363 - 43679417
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaag 43679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 40996969 - 40996912
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaa 260  Q
    ||||||||||||||||||||||||||| ||||||||||| |  |||||||||||||||    
T  40996969 agggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaa 40996912  T

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Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 7113335 - 7113404
Alignment:
Q  198 aaatttagggggtgtattggatca---tgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    ||||| ||||||||||||||||||   ||||||||| |||||||||||||| ||||||||||||| ||||    
T  7113335 aaattaagggggtgtattggatcatcatgattctaagggattttaaaagactttttttatcatgacaaag 7113404  T

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Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 7993023 - 7993082
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  7993023 aggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaag 7993082  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 9882549 - 9882496
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  9882549 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaag 9882496  T

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Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 29615085 - 29615024
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||| |||||||||| |||||||||   |||||||||||||||||| || |||||||||    
T  29615085 ttaggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaag 29615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 23101175 - 23101238
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| ||||| |||| | |||||||  ||||||||||||||||||| || |||||||||    
T  23101175 atttaggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaag 23101238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 33892574 - 33892511
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||    
T  33892574 atttaggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaag 33892511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 10068348 - 10068406
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||  |||||||| | ||||||||||||||||||| || |||||||||    
T  10068348 ggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaag 10068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 28342229 - 28342287
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  28342229 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 28342287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 32883663 - 32883721
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| |||||||||  ||||||||||||| ||||| || |||||||||    
T  32883663 ggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaag 32883721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 509577 - 509638
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||| |||||||||| | |||| ||  ||||||||||||||||||| || |||||||||    
T  509577 ttaggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaag 509638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 7017026 - 7016957
Alignment:
Q  194 tacgaaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7017026 tacgcaatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 7016957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 21146955 - 21147013
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21146955 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 21147013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 27459265 - 27459209
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27459265 gggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaag 27459209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 43319134 - 43319193
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  43319134 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 43319193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 5273276 - 5273223
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaa 5273223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 33656368 - 33656303
Alignment:
Q  199 aatttagg-gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  33656368 aatttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaag 33656303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 32158218 - 32158159
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  32158218 agggggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaag 32158159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 16894174 - 16894121
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaa 261  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcataaaaa 16894121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 6460682 - 6460738
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaag 6460738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 7948630 - 7948577
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| |||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaag 7948577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 14000429 - 14000365
Alignment:
Q  200 atttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  14000429 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 14000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 22746184 - 22746243
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| |||||||||| | ||||||| || ||||||||||||||||| || |||||||||    
T  22746184 aggggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaag 22746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 4550575 - 4550517
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  4550575 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 4550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 9689553 - 9689606
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||| |||||||||| ||||||||| |||| ||||||| |||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagac-tttttattatgaaaaag 9689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 37013807 - 37013860
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| |||||||||   |||||||||||||||||| || |||||||||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaag 37013860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 27786210 - 27786266
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||| | ||||  || |||||||||||||||||||||| || ||||||    
T  27786210 gggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaag 27786266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 6e-26; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 22201896 - 22201960
Alignment:
Q  199 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22201896 aatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 22201960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 25331017 - 25331076
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25331017 agggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaag 25331076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 24131289 - 24131233
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 24131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 30010002 - 30009938
Alignment:
Q  199 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  30010002 aatttagggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaag 30009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 41320632 - 41320695
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  41320632 atttagggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaag 41320695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 42786650 - 42786713
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  42786650 tttagggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 1044697 - 1044755
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  1044697 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 1044755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 7250090 - 7250035
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaa 7250035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 31315043 - 31314989
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 31314989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 46635959 - 46635905
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaa 46635905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 28541587 - 28541643
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaag 28541643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 40537465 - 40537406
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||    
T  40537465 agggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaag 40537406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 41881403 - 41881344
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  41881403 gggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaag 41881344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 25445983 - 25446038
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaag 25446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 32951144 - 32951097
Alignment:
Q  216 ggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaag 32951097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 39479677 - 39479618
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||||||||| ||||||    
T  39479677 agggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaag 39479618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 37915672 - 37915730
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||| || |||||||||    
T  37915672 gggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaag 37915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 1112784 - 1112838
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  1112784 ggtgtattggatcatgattctaa--gattttaaaagactttttttatcatgaaaaag 1112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 25504955 - 25504900
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||    
T  25504955 gggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaag 25504900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 37046769 - 37046713
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||| ||||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaag 37046713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 55302732 - 55302788
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||||||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaag 55302788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 28847193 - 28847130
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| ||||||||||   |||| |||||||||||||||||||||||||| || ||||||    
T  28847193 atttaggggatgtattggattgagattttaaaggattttaaaagacttttttataataaaaaag 28847130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  211 gtattggatcatgattctaaaggattttaaaagacttttt 250  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 19741226 - 19741170
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||| ||||||  |||||||||||||| |||||||||||||| |||||||||||||||    
T  19741226 ggggatgtattcaatcatgattctaaaagattttaaaagact-ttttatcatgaaaaa 19741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 34228880 - 34228843
Alignment:
Q  226 tctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaag 34228843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 53275727 - 53275780
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||| | ||||||||| |  ||||||||||||||||    
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaa 53275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 5441285 - 5441349
Alignment:
Q  200 atttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  5441285 atttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 5441349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 7007262 - 7007318
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| |||| ||||||||| ||| ||||||||| |||||||||||| |||||||||    
T  7007262 gggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaag 7007318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 49469210 - 49469254
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    ||||||||||||||||||||| || | ||||||||||||||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttt 49469254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 25893708 - 25893767
Alignment:
Q  30 atttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccct 89  Q
    |||||||  |||||| |||||||| ||||||||||||||||||  |||||||| ||||||    
T  25893708 atttttgcaaattgataaatacatccatgaaattgtaaaatgttgttcaaaatagtccct 25893767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 25935779 - 25935830
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    ||||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  25935779 atttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 25935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 27454407 - 27454352
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||| ||||||||||||||| ||| | ||||||||||||| |||||| ||||||||    
T  27454407 gggtatattggatcatgattttaaggaattttaaaagactgttttataatgaaaaa 27454352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 27767938 - 27768001
Alignment:
Q  201 tttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  27767938 tttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 27768001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 54341030 - 54341089
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  54341030 aggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 54341089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 20021231 - 20021289
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| || ||| ||| ||||||||||||||||||| || |||||||||    
T  20021231 ggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaag 20021289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 23464840 - 23464900
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaaga--cttttttatcatgaaaaag 263  Q
    |||| |||||||||| |||||||||| | |||||||||||   ||||||||||||||||||    
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaag 23464900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 49835126 - 49835074
Alignment:
Q  211 gtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 49835074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 2301061 - 2300998
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2301061 atttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 2300998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 1391513 - 1391569
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaag 1391569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 6197796 - 6197738
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6197796 gggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaag 6197738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 29076484 - 29076543
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  29076484 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaag 29076543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 29111457 - 29111516
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  29111457 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaag 29111516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 7051728 - 7051790
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||| || ||| | ||||||||  |||||||||||||||||||||||||||||||    
T  7051728 tttagggggtgtgtttgattaggattctaagagattttaaaagacttttttatcatgaaaaag 7051790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 31895583 - 31895641
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  31895583 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 31895641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 14262751 - 14262694
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  14262751 ggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaa 14262694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 34759332 - 34759284
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 250  Q
    |||||||||||||||||| | |||||||   ||||||||||||||||||    
T  34759332 ttagggggtgtattggattaggattctatgagattttaaaagacttttt 34759284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 24502089 - 24502031
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24502089 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 24502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 23115487 - 23115428
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23115487 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 23115428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 42735595 - 42735537
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42735595 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 42735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 7507220 - 7507159
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7507220 ttagagggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 7507159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 24214908 - 24214851
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24214908 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaag 24214851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 2705137 - 2705079
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  2705137 gggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaag 2705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 26374746 - 26374688
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26374746 ggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 26374688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 41478989 - 41479043
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 41479043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 42937250 - 42937306
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaag 42937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 26373692 - 26373751
Alignment:
Q  205 gggggtgtattgg-atcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  26373692 gggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 26373751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 32711599 - 32711542
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaag 32711542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 5576942 - 5576884
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaa 260  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||    
T  5576942 ttagggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaa 5576884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 8543393 - 8543466
Alignment:
Q  191 gcctacgaaatttagggggtgtattggatcatgattctaaaggattttaaaaga-cttttttatcatgaaaaag 263  Q
    ||||||||| || |||||||||||| |||||||||||||| |||||||||||||  ||||||||||| ||||||    
T  8543393 gcctacgaacttaagggggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaag 8543466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 43959549 - 43959604
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagac-ttttttatcatgaaaaag 263  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaag 43959604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 29260369 - 29260316
Alignment:
Q  198 aaatttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  29260369 aaatttagggggtgtattggattgagattttaaaggattttaaaagactttttt 29260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 32497376 - 32497429
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | |||||||  ||||||||||||||||||| ||||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaag 32497429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 42938433 - 42938377
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||| || ||| ||| ||||||||||||||||||||| ||||||||||    
T  42938433 gggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaag 42938377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 4031576 - 4031518
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  4031576 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 4031518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 9288768 - 9288710
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| |||||||||   |||||||||||||||||| || |||||||||    
T  9288768 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaag 9288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 14782453 - 14782395
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  14782453 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 14782395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 44726128 - 44726070
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  44726128 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 44726070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 1606102 - 1606053
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  1606102 ttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 1606053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 16362081 - 16362142
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||| |||||| ||| | |||||||  ||||||||||||||||||| || |||||||||    
T  16362081 ttaggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaag 16362142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 39190084 - 39190035
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaa 259  Q
    |||||||||| | |||||||| ||||||||||||||||||| || |||||    
T  39190084 tgtattggattaggattctaagggattttaaaagactttttaattatgaa 39190035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 41069798 - 41069854
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcat 256  Q
    |||||||||||||||| ||| | |||| ||| ||||||||||||| ||||| |||||    
T  41069798 atttagggggtgtattagattaagattttaagggattttaaaagattttttcatcat 41069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 9e-25; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 6304577 - 6304515
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6304577 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaag 6304515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 22183251 - 22183309
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22183251 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 22183309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 28824695 - 28824633
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28824695 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 28824633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 953697 - 953758
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  953697 ttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 953758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 19452169 - 19452111
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19452169 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaag 19452111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 21222029 - 21222087
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21222029 gggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaag 21222087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 45760329 - 45760271
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  45760329 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 45760271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 35279554 - 35279611
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35279554 ggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaag 35279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 49198585 - 49198528
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  49198585 ggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaag 49198528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 49417964 - 49418023
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  49417964 agggggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaag 49418023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 730030 - 730087
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  730030 gggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaag 730087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 33025393 - 33025450
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  33025393 gggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaa 33025450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 28541381 - 28541437
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatg 257  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  28541381 tttagggggtgtattggatcatgattctaagcgattttaaaagatttttttatcatg 28541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 47654669 - 47654614
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaag 47654614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 50192870 - 50192812
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||    
T  50192870 gggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaag 50192812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 35679445 - 35679389
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaag 35679389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 47780502 - 47780558
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaag 47780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 14494093 - 14494147
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  14494093 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaa 14494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 31572470 - 31572424
Alignment:
Q  217 gatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaag 31572424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 32589279 - 32589215
Alignment:
Q  200 atttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| |||||||||| |||||||||   |||||||||| ||||||||||||||||||||    
T  32589279 atttagggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaag 32589215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 6312447 - 6312513
Alignment:
Q  198 aaatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  6312447 aaatttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 6312513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 9577755 - 9577693
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||| |||||||||| | ||||| || ||||||||||||||||||| || |||||||||    
T  9577755 tttaggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaag 9577693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 45272465 - 45272525
Alignment:
Q  202 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    ||||||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  45272465 ttaggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaa 45272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 46327917 - 46327981
Alignment:
Q  199 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| || ||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  46327917 aatttaggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaag 46327981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 9322828 - 9322761
Alignment:
Q  197 gaaatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  9322828 gaaagttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 9322761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 48524208 - 48524258
Alignment:
Q  212 tattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||| | |||||||||||| |||||||||| ||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagac-tttttatcataaaaaag 48524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 15835367 - 15835314
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 15835314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 25612038 - 25612095
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  25612038 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaa 25612095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 25831213 - 25831168
Alignment:
Q  217 gatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||| | ||||||||||||||||| || ||||||||    
T  25831213 gatcatgattctaaggaattttaaaagactttttaattatgaaaaa 25831168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 34772311 - 34772356
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagactttttta 252  Q
    |||||||||||||  |||||  ||||||||||||||||||||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagactttttta 34772356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 9120049 - 9120114
Alignment:
Q  197 gaaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9120049 gaaattaagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaa 9120114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 31170947 - 31170887
Alignment:
Q  203 tagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31170947 tagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 31170887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 22552088 - 22552026
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22552088 tttagtgggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 22552026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 24776244 - 24776302
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24776244 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 24776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 12407268 - 12407327
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12407268 agggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaag 12407327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 14198894 - 14198839
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 14198839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 44765667 - 44765722
Alignment:
Q  208 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 44765722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 16269581 - 16269638
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  16269581 ggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaag 16269638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 20605042 - 20605099
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaag 20605099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 305792 - 305729
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagactt-ttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  305792 tttagggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaag 305729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 26601522 - 26601463
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  26601522 agggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaag 26601463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 35316947 - 35317009
Alignment:
Q  201 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  35316947 tttaaggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaag 35317009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 1789331 - 1789389
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||    
T  1789331 gggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaag 1789389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 378868 - 378926
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||| || |||||||||    
T  378868 ggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaag 378926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 43847536 - 43847593
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| |||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaag 43847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 14920666 - 14920619
Alignment:
Q  206 ggggtgtattggatcatgattctaaaggattttaaaagacttttttat 253  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  14920666 ggggtgtattggattgtgattttaaaggattttaaaagacttttttat 14920619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 19144912 - 19144971
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||  |||||||||| ||||||||||| | ||||||||||| ||||||    
T  19144912 agggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaag 19144971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 28844439 - 28844502
Alignment:
Q  200 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  28844439 atttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 28844502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 33135512 - 33135570
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||    
T  33135512 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaag 33135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 32125152 - 32125197
Alignment:
Q  218 atcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaag 32125197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 5093352 - 5093317
Alignment:
Q  211 gtattggatcatgattctaaaggattttaaaagact 246  Q
    |||||||||||||||||||| |||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagact 5093317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21987313 - 21987347
Alignment:
Q  229 aaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||| |||||||||    
T  21987313 aaaggattttaaaagacttttttatgatgaaaaag 21987347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 26788673 - 26788731
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  26788673 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 26788731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 3463560 - 3463617
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||| |||||||||| |||||||||   |||||||||||||||||| || ||||||||    
T  3463560 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaa 3463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 38951849 - 38951797
Alignment:
Q  264 acagtaagattttagggtggtttttattacttatttttgttcacaattccaatt 317  Q
    ||||||||| |||||||  ||||| ||| |||||||||||||||||||||||||    
T  38951849 acagtaagaatttaggggagtttt-atttcttatttttgttcacaattccaatt 38951797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 43078569 - 43078622
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaag 43078622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 28740598 - 28740546
Alignment:
Q  211 gtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 28740546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 41725968 - 41725924
Alignment:
Q  26 tttgatttttgtgaattgacaaatacattcatgaaattgtaaaat 70  Q
    |||||||||||||||||||||| || |||  ||||||||||||||    
T  41725968 tttgatttttgtgaattgacaagtatatttgtgaaattgtaaaat 41725924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 39178 - 39114
Alignment:
Q  199 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39178 aattaagggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaag 39114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 100098 - 100157
Alignment:
Q  204 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  100098 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaag 100157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 8654 - 8708
Alignment:
Q  209 gtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaag 8708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 38837 - 38781
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaag 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 15349 - 15295
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  15349 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaa 15295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 15992 - 15938
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||    
T  15992 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaa 15938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 102026 - 102072
Alignment:
Q  207 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 253  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttat 102072  T

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Target: scaffold0922 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 4083 - 4146
Alignment:
Q  201 tttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||||| ||  ||||||||    
T  4083 tttagggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaag 4146  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 81868 - 81822
Alignment:
Q  205 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 251  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||    
T  81868 gggggtgtattggattgagattttaaaggattttaaaagactttttt 81822  T

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Target: scaffold0543 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 10453 - 10506
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 10506  T

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Target: scaffold0492 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 12087 - 12034
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaag 263  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||    
T  12087 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaag 12034  T

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Target: scaffold1504 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 756 - 808
Alignment:
Q  210 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaa 262  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaa 808  T

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