View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17771_low_7 (Length: 452)
Name: NF17771_low_7
Description: NF17771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17771_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 8 - 437
Target Start/End: Original strand, 9657438 - 9657867
Alignment:
| Q |
8 |
attattctacgtacttattcaaattaaattaagttatatgcacaaataaactctcaaattttagatcgctaatccatatagttttactctggctttaaac |
107 |
Q |
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| T |
9657438 |
attattctacgtacttatacaaattaaattaagttatatgcacaaataaactctcgaattttagatcgctaatccatagagttttgctctggttttaaat |
9657537 |
T |
|
| Q |
108 |
taagccctcataaacggtgggattgaaacccttcgatctaatattagtcggtccttgagtctgatatcgattttgattttgattttgaaaagtttcttga |
207 |
Q |
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| T |
9657538 |
taagccctcataaatagtgggattggaacccttcggtctcatattagtccgtccttgagtctgatatcgatttttatttttattttgaaaagtctcttga |
9657637 |
T |
|
| Q |
208 |
ctttctccaaatcatatgaaatcacccttgagttaaaatgtggaccatagtatttgagagacacttgaaggacaagtcttaatatatatgcaaacaagct |
307 |
Q |
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| T |
9657638 |
ctttctccaaatcatatgaaatcacccttgagttaaaatgtggaccatagtatttgagagacacttgaaggacaagtcttaatatatatgcaaacaagct |
9657737 |
T |
|
| Q |
308 |
tatttggccaagatggagcaacaagatgattgtgttttatgcatgccatgatttatatataaatagtaacttctaaaacacgcttatggccagctagcat |
407 |
Q |
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|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9657738 |
taattggccaaaatggagcaacaagatgattgtgttttatgcatgccatgatttatatataaatagtaacttctaaaacacgcttatggccagctagcat |
9657837 |
T |
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| Q |
408 |
gtagtgatggcagtgccaactgtagcaaat |
437 |
Q |
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| T |
9657838 |
gtagtgatgacagtgccaactgtagcaaat |
9657867 |
T |
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