View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17774_high_1 (Length: 386)
Name: NF17774_high_1
Description: NF17774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17774_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 41 - 280
Target Start/End: Original strand, 10606449 - 10606688
Alignment:
| Q |
41 |
ttataagtttaacatatgcataaacatgttttgaattattgatcaatgtgattccccgtctcaacaatacttagttccatgatcaggattttgatactac |
140 |
Q |
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| T |
10606449 |
ttataagtttaacatatgcataaacatgttttgaattattgatcaatgtgaatccccgtctcatcaatacttagttccatgatcaggatgttgatactac |
10606548 |
T |
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| Q |
141 |
agatttcttaattctaatctgataatacttaccaaatcaacagattggtcatttcaataatgtaagnnnnnnnttcagaaaggaattcatcatcaaattc |
240 |
Q |
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| T |
10606549 |
agatttcttaattctaatttgataataattaccaaatcaacagattggtcatttcaataatgtaagaaaaaaattcagaaaggaattcatcatcaaattc |
10606648 |
T |
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| Q |
241 |
agctaaagaagaatgaaaggaatctaaaactcataaatta |
280 |
Q |
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| T |
10606649 |
agctaaataagaatgaaaggaatctaagactcataaatta |
10606688 |
T |
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