View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17775_low_1 (Length: 807)

Name: NF17775_low_1
Description: NF17775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17775_low_1
NF17775_low_1
[»] chr4 (16 HSPs)
chr4 (9-475)||(26692860-26693327)
chr4 (560-685)||(26695699-26695824)
chr4 (681-789)||(26696197-26696305)
chr4 (506-552)||(4485847-4485893)
chr4 (509-552)||(10082403-10082446)
chr4 (505-552)||(21623432-21623479)
chr4 (509-548)||(55924804-55924843)
chr4 (509-548)||(56088090-56088129)
chr4 (505-548)||(56497621-56497664)
chr4 (506-552)||(3527391-3527437)
chr4 (514-548)||(37208045-37208079)
chr4 (506-556)||(46676512-46676562)
chr4 (505-538)||(11269709-11269742)
chr4 (505-538)||(24785475-24785508)
chr4 (505-538)||(24822758-24822791)
chr4 (506-547)||(26008063-26008104)
[»] chr2 (20 HSPs)
chr2 (492-540)||(40797377-40797425)
chr2 (498-552)||(29872178-29872232)
chr2 (507-552)||(30045454-30045499)
chr2 (507-552)||(30050617-30050662)
chr2 (507-552)||(30141661-30141706)
chr2 (495-556)||(34903514-34903575)
chr2 (492-557)||(42200683-42200748)
chr2 (495-534)||(5980246-5980285)
chr2 (513-560)||(8008033-8008080)
chr2 (509-548)||(27934874-27934913)
chr2 (491-534)||(38093873-38093916)
chr2 (489-548)||(43826439-43826498)
chr2 (506-548)||(7413203-7413245)
chr2 (506-552)||(30089050-30089096)
chr2 (506-552)||(30125654-30125700)
chr2 (506-556)||(40099397-40099447)
chr2 (505-542)||(8387898-8387935)
chr2 (507-548)||(10156022-10156063)
chr2 (509-554)||(18688929-18688974)
chr2 (507-548)||(19156179-19156220)
[»] chr8 (10 HSPs)
chr8 (505-552)||(1244718-1244765)
chr8 (495-552)||(9014680-9014737)
chr8 (507-556)||(26695320-26695369)
chr8 (507-538)||(42982900-42982931)
chr8 (506-548)||(444418-444460)
chr8 (495-552)||(36122523-36122581)
chr8 (506-548)||(43962038-43962080)
chr8 (507-548)||(7380049-7380090)
chr8 (505-538)||(19488315-19488348)
chr8 (506-551)||(38282853-38282898)
[»] chr7 (6 HSPs)
chr7 (506-548)||(5352334-5352376)
chr7 (505-552)||(7872761-7872808)
chr7 (505-548)||(21286355-21286398)
chr7 (507-557)||(2962741-2962791)
chr7 (510-548)||(10461782-10461820)
chr7 (513-542)||(22062434-22062463)
[»] chr1 (10 HSPs)
chr1 (506-552)||(8269382-8269428)
chr1 (495-547)||(7652107-7652159)
chr1 (505-552)||(10132457-10132504)
chr1 (513-548)||(26525557-26525592)
chr1 (506-548)||(8210399-8210441)
chr1 (506-548)||(19620581-19620623)
chr1 (507-552)||(45190284-45190329)
chr1 (509-542)||(45224296-45224329)
chr1 (506-547)||(49183179-49183220)
chr1 (506-547)||(52592441-52592482)
[»] chr5 (4 HSPs)
chr5 (492-544)||(16531275-16531327)
chr5 (507-542)||(34000582-34000617)
chr5 (494-552)||(11844440-11844498)
chr5 (507-557)||(17338718-17338768)
[»] chr3 (9 HSPs)
chr3 (489-548)||(8121747-8121806)
chr3 (505-548)||(28130947-28130990)
chr3 (505-548)||(35863826-35863869)
chr3 (505-556)||(45096023-45096074)
chr3 (495-548)||(1149072-1149125)
chr3 (507-552)||(1744005-1744050)
chr3 (507-548)||(12131688-12131729)
chr3 (506-547)||(28266722-28266763)
chr3 (509-554)||(38869535-38869580)
[»] chr6 (3 HSPs)
chr6 (514-552)||(23507413-23507451)
chr6 (498-552)||(23629843-23629897)
chr6 (506-548)||(26400869-26400911)


Alignment Details
Target: chr4 (Bit Score: 436; Significance: 0; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 9 - 475
Target Start/End: Original strand, 26692860 - 26693327
Alignment:
Q  9 agaagcaaaggtaaaggggtaaagggacaacaaaaatgatcaaccaacagaaaagtgaggacaaaaactgaacgcaaaggtaagaactaagaacatgggg 108  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26692860 agaaacaaaggtaaagggataaagggacaacaaaaatgatcaaccaacagaaaagtgaggacaaaaactgaacgcaaaggtaagaactaagaacatgggg 26692959  T
Q  109 taaattaaagttgttgctaacccatggttcttggaaaagagatagcaccaaaacagagatgggcgctctcatggggtaatggtagcttcacgtgcaaagt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26692960 taaattaaagttgttgctaacccatggttcttggaaaagagatagcaccaaaacagagatgggcgctctcatggggtaatggtagcttcacgtgcaaagt 26693059  T
Q  209 gtaagggacaaagttccggagcaattaagcaagtgattagacagttaattgaag-aaagtaattaaatgccaccaattaattatggacacgaaactgaaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26693060 gtaagggacaaagttccggagcaattaagcaagtgattagacaattaattgaagaaaagtaattaaatgccaccaattaattatggacacgaaactgaaa 26693159  T
Q  308 ttaaagctcaaagttgaagtttggttagcttatcaacaattatgtgattagacatgtggagccaaatatgtctatgcatacaaattttcaattaagccaa 407  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26693160 ttaaagctcaaagttgaagtttggttagcttatcaacaatcatgtgattagacatgtggagccaaatatgtctatgaatacaaattttcaattaagccaa 26693259  T
Q  408 atcctttagaagaaggccgggatgattcaactatgtaacatatattattattttaaataggtcaaata 475  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26693260 atcctttagaagaaggccgggatgattcaactatgcaacatatattattattttaaataggtcaaata 26693327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 560 - 685
Target Start/End: Original strand, 26695699 - 26695824
Alignment:
Q  560 ataggtcaaatatttaaacctaatggtacttttgtaatcacgcatattattatttcaagtcaaattttatagtcactatcacatatatttaacttacgct 659  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26695699 ataggtcaaatatttaaacctaatggtacttttgtaatcacgcatattattatttcaagtcaaattttatagtcactatcacatatatttaacttacgct 26695798  T
Q  660 aaggagattatgatcaacacacctta 685  Q
    ||||||||||||||||||||||||||    
T  26695799 aaggagattatgatcaacacacctta 26695824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 681 - 789
Target Start/End: Original strand, 26696197 - 26696305
Alignment:
Q  681 ccttaaagtgtgtttttcttcccaattttacacattccatttactcatgcatgcctttctactgtcactaatcaccatagatcggttgttcttttttaaa 780  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26696197 ccttaaagtgtgtttttcttcccaattttacacattccatttactcatgcatgcctttctactgtcactaatcaccatagatcggttgttcttttttaaa 26696296  T
Q  781 gttgggaat 789  Q
    |||||||||    
T  26696297 gttgggaat 26696305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 552
Target Start/End: Original strand, 4485847 - 4485893
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  4485847 gaccttgcatatactatgtattgtccttatcaattgaactaagttca 4485893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 552
Target Start/End: Complemental strand, 10082446 - 10082403
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||    
T  10082446 cttgtatatattatgtattgtccctaccaactgagctaagttca 10082403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 21623432 - 21623479
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||||| |||||||||| ||||||| |||||| |||||||||||||    
T  21623432 agaccttgcatatattatgcattgtccctaccaactgaactaagttca 21623479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 548
Target Start/End: Original strand, 55924804 - 55924843
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  55924804 cttgcatatattatgtattgtccttaccaattgagctaag 55924843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 548
Target Start/End: Original strand, 56088090 - 56088129
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  56088090 cttgcatatattatgtattgtccttaccaattgagctaag 56088129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 548
Target Start/End: Original strand, 56497621 - 56497664
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||| |||||||||| |||||||||||||||||| |||||    
T  56497621 agaccttgcatatattatgcattgtccttaccaattgagctaag 56497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 3527437 - 3527391
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||||||||||||||||||||||| ||| || ||| |||||||||    
T  3527437 gaccttgtatatattatgtattgtccctactaactgagctaagttca 3527391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 514 - 548
Target Start/End: Complemental strand, 37208079 - 37208045
Alignment:
Q  514 atatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||||||||||||| |||||||||||||||||    
T  37208079 atatattatgtattgtctttaccaattgaactaag 37208045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 556
Target Start/End: Original strand, 46676512 - 46676562
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttcatggg 556  Q
    ||||||| |||||||||| |||||||||||||| ||| ||||| |||||||    
T  46676512 gaccttgcatatattatgcattgtccttaccaactgagctaagctcatggg 46676562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 11269742 - 11269709
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaa 538  Q
    |||||||| |||||||||||||||||||||||||    
T  11269742 agaccttgcatatattatgtattgtccttaccaa 11269709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 24785475 - 24785508
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaa 538  Q
    ||||||||||||||||||| ||||||||||||||    
T  24785475 agaccttgtatatattatgcattgtccttaccaa 24785508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 24822791 - 24822758
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaa 538  Q
    ||||||||||||||||||| ||||||||||||||    
T  24822791 agaccttgtatatattatgcattgtccttaccaa 24822758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Original strand, 26008063 - 26008104
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaa 547  Q
    ||||||| |||||||||| |||||| ||||||||||||||||    
T  26008063 gaccttgcatatattatgcattgtctttaccaattgaactaa 26008104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 492 - 540
Target Start/End: Complemental strand, 40797425 - 40797377
Alignment:
Q  492 gaattcgaactttagaccttgtatatattatgtattgtccttaccaatt 540  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  40797425 gaattcgaaccttagaccttgtatatattatgcattgtccttaccaatt 40797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 552
Target Start/End: Original strand, 29872178 - 29872232
Alignment:
Q  498 gaactttagaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||| |||||||||| |||||||||||||||| | |||||| |||||||||||||    
T  29872178 gaaccttagaccttgcatatattatgtattgttcataccaactgaactaagttca 29872232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 30045499 - 30045454
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||    
T  30045499 accttgtatatattatgcattgtccctaccaattgagctaagttca 30045454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 30050662 - 30050617
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||    
T  30050662 accttgtatatattatgcattgtccctaccaattgagctaagttca 30050617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 30141706 - 30141661
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||    
T  30141706 accttgtatatattatgcattgtccctaccaattgagctaagttca 30141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 556
Target Start/End: Complemental strand, 34903575 - 34903514
Alignment:
Q  495 ttcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaagttcatggg 556  Q
    ||||||| | |||||||| |||||||||| | |||||||||||| ||||||||| |||||||    
T  34903575 ttcgaacctcagaccttgcatatattatgcactgtccttaccaactgaactaagctcatggg 34903514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 557
Target Start/End: Complemental strand, 42200748 - 42200683
Alignment:
Q  492 gaattcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaagttcatggga 557  Q
    |||||||||| | |||||||| ||||||||||||||||| ||||||| |||  ||| |||||||||    
T  42200748 gaattcgaacatcagaccttgcatatattatgtattgtctttaccaactgagttaacttcatggga 42200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 534
Target Start/End: Complemental strand, 5980285 - 5980246
Alignment:
Q  495 ttcgaactttagaccttgtatatattatgtattgtcctta 534  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  5980285 ttcgaactttagaccttgcatatattatgcattgtcctta 5980246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 560
Target Start/End: Complemental strand, 8008080 - 8008033
Alignment:
Q  513 tatatattatgtattgtccttaccaattgaactaagttcatgggaata 560  Q
    |||||||||||||||||||||| ||| ||| ||||||||| |||||||    
T  8008080 tatatattatgtattgtccttatcaactgagctaagttcacgggaata 8008033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 548
Target Start/End: Original strand, 27934874 - 27934913
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  27934874 cttgtatatattatgtattgtccttaccaactgagctaag 27934913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 534
Target Start/End: Complemental strand, 38093916 - 38093873
Alignment:
Q  491 agaattcgaactttagaccttgtatatattatgtattgtcctta 534  Q
    ||||||||||||||  |||||||||||||||||||||| |||||    
T  38093916 agaattcgaactttgaaccttgtatatattatgtattgccctta 38093873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 548
Target Start/End: Original strand, 43826439 - 43826498
Alignment:
Q  489 tcagaattcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||||||||| | | |||||  ||||||||||||||||||||||||| ||| |||||    
T  43826439 tcagaattcgaacatcataccttacatatattatgtattgtccttaccaactgagctaag 43826498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Original strand, 7413203 - 7413245
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||||||||||||| |||||||||||||| ||| |||||    
T  7413203 gaccttgtatatattatgcattgtccttaccaactgagctaag 7413245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 30089096 - 30089050
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||||||||||||||| ||||||| |||||| ||| |||||||||    
T  30089096 gaccttgtatatattatgcattgtccctaccaactgagctaagttca 30089050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 552
Target Start/End: Complemental strand, 30125700 - 30125654
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||||||||||||||| ||||||| |||||| ||| |||||||||    
T  30125700 gaccttgtatatattatgcattgtccctaccaactgagctaagttca 30125654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 556
Target Start/End: Original strand, 40099397 - 40099447
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttcatggg 556  Q
    ||||||| |||||||||| |||||||||||||| ||| ||||| |||||||    
T  40099397 gaccttgcatatattatgcattgtccttaccaactgagctaagctcatggg 40099447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 542
Target Start/End: Original strand, 8387898 - 8387935
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattga 542  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  8387898 agaccttgaatatattatgcattgtccttaccaattga 8387935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 10156063 - 10156022
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||| ||||||||||||||||||||||||| ||| |||||    
T  10156063 accttgcatatattatgtattgtccttaccaactgagctaag 10156022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 554
Target Start/End: Original strand, 18688929 - 18688974
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattgaactaagttcatg 554  Q
    ||||||| |||||||||||||| |||||||||||  ||||||||||    
T  18688929 cttgtatgtattatgtattgtctttaccaattgagttaagttcatg 18688974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Original strand, 19156179 - 19156220
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||| |||||||||||| |||||||||||||||| |||||    
T  19156179 accttgcatatattatgtactgtccttaccaattgagctaag 19156220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000008; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 1244718 - 1244765
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  1244718 agaccttgtatatattatgcattgtccttaccaactgagctaagttca 1244765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 9014680 - 9014737
Alignment:
Q  495 ttcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||  |||||||| |||||||||||||||||  |||||||||| |||||||||    
T  9014680 ttcgaactccagaccttgcatatattatgtattgtcgctaccaattgagctaagttca 9014737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 507 - 556
Target Start/End: Original strand, 26695320 - 26695369
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttcatggg 556  Q
    |||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  26695320 accttgcatatattatgtattatccttaacaattgagctaagttcatggg 26695369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 538
Target Start/End: Complemental strand, 42982931 - 42982900
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaa 538  Q
    ||||||||||||||||||||||||||||||||    
T  42982931 accttgtatatattatgtattgtccttaccaa 42982900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Complemental strand, 444460 - 444418
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||| |||||||||| |||||||||||||||||| |||||    
T  444460 gaccttgcatatattatgcattgtccttaccaattgagctaag 444418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 36122581 - 36122523
Alignment:
Q  495 ttcgaactttagaccttgtatatattatgtatt-gtccttaccaattgaactaagttca 552  Q
    |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  36122581 ttcgaaccctagaccttgcatatattatgcatttgtccctaccaattgaactaagttca 36122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Original strand, 43962038 - 43962080
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||    
T  43962038 gaccttgcatatattatgtattgtccttaccaactgagctaag 43962080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Complemental strand, 7380090 - 7380049
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||||||||||||||||||||| || ||||||| |||||    
T  7380090 accttgtatatattatgtattgtccataacaattgagctaag 7380049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 19488348 - 19488315
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaa 538  Q
    ||||||||||||||||||| ||||||||||||||    
T  19488348 agaccttgtatatattatgcattgtccttaccaa 19488315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 551
Target Start/End: Original strand, 38282853 - 38282898
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttc 551  Q
    ||||||||||||| |||| |||||||||||||| ||| ||||||||    
T  38282853 gaccttgtatatactatgcattgtccttaccaactgagctaagttc 38282898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 548
Target Start/End: Complemental strand, 5352376 - 5352334
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  5352376 gaccttgtatatattatgtattgtccttaccaactgagctaag 5352334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 7872761 - 7872808
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||||| |||||||||| |||||||||||||| ||| |||||||||    
T  7872761 agaccttgcatatattatgcattgtccttaccaactgagctaagttca 7872808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 548
Target Start/End: Complemental strand, 21286398 - 21286355
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||| |||||||||||||||||| |||||||||| |||||    
T  21286398 agaccttgcatatattatgtattgtccataccaattgagctaag 21286355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 557
Target Start/End: Original strand, 2962741 - 2962791
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttcatggga 557  Q
    |||||| |||||||||| ||| || ||||||||||||||||||||| ||||    
T  2962741 accttgcatatattatgcattatctttaccaattgaactaagttcacggga 2962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 548
Target Start/End: Original strand, 10461782 - 10461820
Alignment:
Q  510 ttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  10461782 ttgtatatattatgcattgtccttatcaattgaactaag 10461820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 542
Target Start/End: Original strand, 22062434 - 22062463
Alignment:
Q  513 tatatattatgtattgtccttaccaattga 542  Q
    ||||||||||||||||||||||||||||||    
T  22062434 tatatattatgtattgtccttaccaattga 22062463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 506 - 552
Target Start/End: Original strand, 8269382 - 8269428
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  8269382 gaccttgcatatattatgtattgtccttaccaactgagctaagttca 8269428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 547
Target Start/End: Complemental strand, 7652159 - 7652107
Alignment:
Q  495 ttcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaa 547  Q
    ||||||||| |||||||  |||||||||||||||||| |||||| ||||||||    
T  7652159 ttcgaacttcagaccttacatatattatgtattgtccataccaactgaactaa 7652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 552
Target Start/End: Original strand, 10132457 - 10132504
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||||| |||||||||| |||||||||||||| ||| |||||||||    
T  10132457 agaccttgcatatattatgcattgtccttaccaactgatctaagttca 10132504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 548
Target Start/End: Original strand, 26525557 - 26525592
Alignment:
Q  513 tatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||||||||||||||||||||||||||| ||||    
T  26525557 tatatattatgtattgtccttaccaattgaattaag 26525592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Original strand, 8210399 - 8210441
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  8210399 gaccttgtatatattatgcattgtccttaccaactaaactaag 8210441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Complemental strand, 19620623 - 19620581
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||    
T  19620623 gaccttgcatatattatgtattgtccttaccaactgagctaag 19620581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 552
Target Start/End: Original strand, 45190284 - 45190329
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||| |||||||||| ||||||| |||||| |||||||||||||    
T  45190284 accttgcatatattatgcattgtccataccaactgaactaagttca 45190329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 542
Target Start/End: Original strand, 45224296 - 45224329
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattga 542  Q
    ||||||||||||||| ||||||||||||||||||    
T  45224296 cttgtatatattatgaattgtccttaccaattga 45224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 49183220 - 49183179
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaa 547  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||    
T  49183220 gaccttgcatatattatgtattgtccttaccaactgagctaa 49183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Original strand, 52592441 - 52592482
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaa 547  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||    
T  52592441 gaccttgcatatattatatattgtccttaccaattgagctaa 52592482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 492 - 544
Target Start/End: Original strand, 16531275 - 16531327
Alignment:
Q  492 gaattcgaactttagaccttgtatatattatgtattgtccttaccaattgaac 544  Q
    ||||||||||| | ||||||| |||||||||| |||||||||||||| |||||    
T  16531275 gaattcgaactatggaccttgcatatattatgcattgtccttaccaactgaac 16531327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 542
Target Start/End: Complemental strand, 34000617 - 34000582
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattga 542  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34000617 accttgtatatattatgtattgtccataccaattga 34000582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 11844440 - 11844498
Alignment:
Q  494 attcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    ||||||||  || |||||| |||||||||| |||||||||||||| ||| |||||||||    
T  11844440 attcgaaccctaaaccttgcatatattatgcattgtccttaccaactgagctaagttca 11844498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 507 - 557
Target Start/End: Original strand, 17338718 - 17338768
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttcatggga 557  Q
    |||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||    
T  17338718 accttgcatatattatgtattgtctttaccaattgagctaagctcacggga 17338768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000002; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 548
Target Start/End: Complemental strand, 8121806 - 8121747
Alignment:
Q  489 tcagaattcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||| |||||||||| |||||||  ||||||||  ||||||||||||||| |||||||||    
T  8121806 tcaggattcgaacttcagaccttacatatattaaatattgtccttaccaactgaactaag 8121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 548
Target Start/End: Original strand, 28130947 - 28130990
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  28130947 agaccttgcatatattatgcattgtccttaccatttgaactaag 28130990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 548
Target Start/End: Original strand, 35863826 - 35863869
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||    
T  35863826 agaccttgcatatattatgtattgtccttaccaactgagctaag 35863869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 556
Target Start/End: Complemental strand, 45096074 - 45096023
Alignment:
Q  505 agaccttgtatatattatgtattgtccttaccaattgaactaagttcatggg 556  Q
    |||||||| |||||||||| |||||||||| ||| ||| |||||||||||||    
T  45096074 agaccttgcatatattatgcattgtccttatcaactgagctaagttcatggg 45096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 548
Target Start/End: Original strand, 1149072 - 1149125
Alignment:
Q  495 ttcgaactttagaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    |||||||  ||||||||| |||||||||| |||||||||||||| ||| |||||    
T  1149072 ttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaag 1149125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 552
Target Start/End: Original strand, 1744005 - 1744050
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||| |||||||||||||||||| |||||| |||| ||||||||    
T  1744005 accttgcatatattatgtattgtccataccaactgaattaagttca 1744050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 548
Target Start/End: Original strand, 12131688 - 12131729
Alignment:
Q  507 accttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||||||||||||| ||||||  ||||||||||||||||    
T  12131688 accttgtatatattatgcattgtctataccaattgaactaag 12131729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 28266763 - 28266722
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaa 547  Q
    ||||||| |||||||||| |||||||||||||| ||||||||    
T  28266763 gaccttgcatatattatgcattgtccttaccaactgaactaa 28266722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 554
Target Start/End: Original strand, 38869535 - 38869580
Alignment:
Q  509 cttgtatatattatgtattgtccttaccaattgaactaagttcatg 554  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  38869535 cttgtatatattatgcattgttcttaccaactgagctaagttcatg 38869580  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 514 - 552
Target Start/End: Original strand, 23507413 - 23507451
Alignment:
Q  514 atatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  23507413 atattttatgtattgtccttaccaactgaactaagttca 23507451  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 498 - 552
Target Start/End: Original strand, 23629843 - 23629897
Alignment:
Q  498 gaactttagaccttgtatatattatgtattgtccttaccaattgaactaagttca 552  Q
    |||||| | |||||| |||||||||| |||||| ||||||||||| |||||||||    
T  23629843 gaacttcataccttgcatatattatgcattgtcattaccaattgagctaagttca 23629897  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 548
Target Start/End: Complemental strand, 26400911 - 26400869
Alignment:
Q  506 gaccttgtatatattatgtattgtccttaccaattgaactaag 548  Q
    ||||||| |||||||||||||||||| |||||||||| |||||    
T  26400911 gaccttgcatatattatgtattgtccataccaattgagctaag 26400869  T

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