View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17775_low_26 (Length: 289)
Name: NF17775_low_26
Description: NF17775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17775_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 20 - 281
Target Start/End: Complemental strand, 7948631 - 7948370
Alignment:
| Q |
20 |
ttaacatttcatattagatgagtcctaatcgggactcaatttcacaaataccaatcactatttagttactggttgattgaacatgattgcattcagagat |
119 |
Q |
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| T |
7948631 |
ttaacatttcatattagatgagtcataatggagactcaatttcacaaataccaatcactatttaattactgcttgattgaacatgattgtattcacagat |
7948532 |
T |
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| Q |
120 |
tttcaaattcagtactttatgcatcatcatttttctccaaaaataaacatacaaataatttaagggaaaaaagcacctcaaccatgaaagacacatctca |
219 |
Q |
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| T |
7948531 |
tttcaaatttagtactttatgcatcatcatttttctccaaaaataaacatacaaataatttaagggaaaaaagcacctcaaccatgaaagacacatctca |
7948432 |
T |
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| Q |
220 |
acctctctcccacaaccaaggcatgaaaggcggagaataactctgacatgacatgatgatgt |
281 |
Q |
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| T |
7948431 |
acctctctcccacaaccaaggcatgaaaggcggagaataactctgacatgacatgatgatgt |
7948370 |
T |
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