View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17775_low_33 (Length: 240)
Name: NF17775_low_33
Description: NF17775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17775_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 7949114 - 7949266
Alignment:
| Q |
77 |
agaaaccatttatttagatgaaaaataagatttaaagttagagaaagaagatggaactcctgtctctaaaagtttgtgtcaactatttattcattcatac |
176 |
Q |
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| T |
7949114 |
agaaaccatttatttagatgaaaaataagatttaaagttagagaaagaagatggaactcctgtctctaaaagtttgtatcaactatttattcattcatac |
7949213 |
T |
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| Q |
177 |
atttgttagtaaccaatatagtgtaagtaacataaggagagacggtttcaaatg |
230 |
Q |
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| T |
7949214 |
attag-taaccaccaatatagtgtaagtaacacaaggagagacggcttcaaatg |
7949266 |
T |
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