View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17775_low_34 (Length: 238)
Name: NF17775_low_34
Description: NF17775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17775_low_34 |
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Alignment Details
Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 10568302 - 10568109
Alignment:
| Q |
15 |
tcaaaaatattatgtgatcggtttccgtccatcaccaattagtattaccctacccnnnnnnn-gtcacaatccgtagtcaatatcaacttttcttttttg |
113 |
Q |
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| T |
10568302 |
tcaaaaatattatgtgatcggtttccgtccatcaccaattagtattaccctacccaaaaaaaagtcacaatccgtagtcaagatcaacttttcttttttg |
10568203 |
T |
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| Q |
114 |
aatatatggtcaatatcaactctttaatgtgcgttattggtccattcaatccaataaattgagtgaaaatgaaaactccttgcgaccaaaccat |
207 |
Q |
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| T |
10568202 |
aatatatggtcaatatcaactctttaatgtgcgctattggtccattcaatccattaaattgagtgaaaatgaaaactccttgcgaccaaaccat |
10568109 |
T |
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