View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17777_high_36 (Length: 206)
Name: NF17777_high_36
Description: NF17777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17777_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 46046831 - 46046650
Alignment:
| Q |
15 |
aattagagtacagagatggagagttcatgctcctcccaacccacaatttggtgttgccgatgcttctcacatttgcatcatgtaggttggtaccagctga |
114 |
Q |
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| T |
46046831 |
aattagagtacagagatggagagttaacgctcctcccaacccacaatttggtgttgccgatgcttctcacatttgcatcatgtaggttggtaccagctga |
46046732 |
T |
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| Q |
115 |
ccgacctagctggtattggagcacctccatctctgaaccctatatctttgttgatatatctatgtttttcgtttctcctatg |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46046731 |
ccgacctagctggtattggagcacctccatctctgaaccctatatctttgttgatatatctatgtttttcgtttctcctatg |
46046650 |
T |
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