View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17777_high_6 (Length: 462)

Name: NF17777_high_6
Description: NF17777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17777_high_6
NF17777_high_6
[»] chr3 (27 HSPs)
chr3 (93-271)||(22736614-22736792)
chr3 (100-253)||(44476054-44476207)
chr3 (100-253)||(44481895-44482048)
chr3 (139-271)||(22735403-22735535)
chr3 (100-207)||(45278549-45278656)
chr3 (100-207)||(48188383-48188490)
chr3 (89-207)||(48189087-48189205)
chr3 (98-207)||(45279272-45279381)
chr3 (100-207)||(37249204-37249311)
chr3 (93-207)||(2944654-2944768)
chr3 (98-207)||(11026620-11026729)
chr3 (100-207)||(43105822-43105929)
chr3 (98-207)||(1756553-1756662)
chr3 (98-199)||(1757300-1757401)
chr3 (100-207)||(37249786-37249892)
chr3 (98-206)||(43105236-43105344)
chr3 (89-182)||(29193006-29193099)
chr3 (100-207)||(29192040-29192147)
chr3 (117-207)||(11025959-11026049)
chr3 (93-207)||(32717093-32717207)
chr3 (93-207)||(2943911-2944025)
chr3 (93-215)||(22129004-22129126)
chr3 (131-215)||(30890243-30890327)
chr3 (340-387)||(22735692-22735739)
chr3 (98-197)||(10998155-10998254)
chr3 (154-215)||(21255795-21255856)
chr3 (130-207)||(32716284-32716361)
[»] scaffold0018 (2 HSPs)
scaffold0018 (98-271)||(73112-73285)
scaffold0018 (340-387)||(73442-73489)
[»] chr1 (28 HSPs)
chr1 (100-271)||(32619389-32619560)
chr1 (100-271)||(32622280-32622451)
chr1 (98-254)||(51935140-51935296)
chr1 (98-207)||(46282074-46282183)
chr1 (100-207)||(46282781-46282888)
chr1 (92-207)||(49093038-49093153)
chr1 (100-207)||(50062936-50063043)
chr1 (388-444)||(6345061-6345117)
chr1 (133-207)||(49093801-49093875)
chr1 (100-253)||(32238704-32238859)
chr1 (94-195)||(25065958-25066059)
chr1 (98-167)||(13295608-13295677)
chr1 (138-207)||(50062246-50062315)
chr1 (98-195)||(13295138-13295235)
chr1 (98-197)||(1047486-1047585)
chr1 (98-233)||(2828196-2828331)
chr1 (132-211)||(2829523-2829602)
chr1 (100-214)||(6345618-6345732)
chr1 (100-213)||(6344260-6344373)
chr1 (93-195)||(25064931-25065033)
chr1 (84-197)||(25414833-25414946)
chr1 (98-215)||(37152802-37152919)
chr1 (131-215)||(10019637-10019721)
chr1 (117-212)||(46544998-46545093)
chr1 (98-215)||(2953728-2953845)
chr1 (98-215)||(24701533-24701650)
chr1 (340-377)||(32619730-32619767)
chr1 (340-377)||(32622073-32622110)
[»] chr7 (22 HSPs)
chr7 (98-265)||(37284112-37284279)
chr7 (98-265)||(37289240-37289407)
chr7 (98-207)||(27480735-27480844)
chr7 (98-207)||(27479990-27480099)
chr7 (100-207)||(22661362-22661469)
chr7 (89-179)||(12643094-12643184)
chr7 (98-207)||(47558033-47558142)
chr7 (92-207)||(4227160-4227275)
chr7 (93-213)||(7158229-7158349)
chr7 (93-208)||(4226123-4226238)
chr7 (98-207)||(12644121-12644230)
chr7 (98-195)||(45915808-45915905)
chr7 (93-197)||(12929285-12929389)
chr7 (93-197)||(12930770-12930874)
chr7 (92-195)||(38643547-38643650)
chr7 (93-207)||(45914524-45914636)
chr7 (100-250)||(31695559-31695709)
chr7 (98-197)||(37563636-37563735)
chr7 (93-197)||(43937892-43937996)
chr7 (89-232)||(31694465-31694608)
chr7 (93-197)||(37563352-37563456)
chr7 (153-213)||(47738979-47739039)
[»] chr5 (32 HSPs)
chr5 (100-271)||(21977941-21978112)
chr5 (100-271)||(21972095-21972265)
chr5 (93-254)||(8654105-8654267)
chr5 (91-207)||(20072857-20072973)
chr5 (100-207)||(36476770-36476877)
chr5 (100-207)||(36477364-36477471)
chr5 (98-207)||(16533613-16533722)
chr5 (98-207)||(20072124-20072233)
chr5 (98-207)||(39181060-39181169)
chr5 (98-207)||(39181784-39181893)
chr5 (98-233)||(14744692-14744827)
chr5 (100-207)||(16532898-16533005)
chr5 (92-207)||(20856929-20857044)
chr5 (92-206)||(22870451-22870565)
chr5 (93-207)||(20857535-20857649)
chr5 (109-207)||(22869619-22869717)
chr5 (81-179)||(31107917-31108015)
chr5 (89-197)||(32052218-32052326)
chr5 (133-197)||(39402146-39402210)
chr5 (100-214)||(8673739-8673853)
chr5 (90-211)||(21978955-21979076)
chr5 (98-215)||(25253089-25253206)
chr5 (98-215)||(25316879-25316996)
chr5 (171-215)||(21978167-21978211)
chr5 (91-215)||(37944990-37945114)
chr5 (92-215)||(14745445-14745568)
chr5 (90-197)||(25253368-25253475)
chr5 (90-197)||(25317159-25317266)
chr5 (93-195)||(31108338-31108439)
chr5 (154-215)||(22024134-22024195)
chr5 (98-215)||(32052488-32052605)
chr5 (93-197)||(33735311-33735415)
[»] chr8 (29 HSPs)
chr8 (89-265)||(33497546-33497722)
chr8 (99-265)||(33497020-33497186)
chr8 (98-253)||(38598967-38599122)
chr8 (93-207)||(34665768-34665882)
chr8 (100-207)||(34666529-34666635)
chr8 (98-207)||(34214516-34214626)
chr8 (98-215)||(1231529-1231646)
chr8 (109-252)||(7393088-7393231)
chr8 (98-207)||(34213767-34213876)
chr8 (93-206)||(1232788-1232899)
chr8 (109-253)||(24378939-24379082)
chr8 (93-197)||(25288074-25288178)
chr8 (100-214)||(4970130-4970244)
chr8 (121-219)||(24377207-24377305)
chr8 (137-252)||(7392250-7392365)
chr8 (100-250)||(29574747-29574897)
chr8 (98-215)||(25287795-25287912)
chr8 (98-211)||(27437503-27437616)
chr8 (98-213)||(27436566-27436681)
chr8 (406-444)||(4970729-4970767)
chr8 (94-215)||(29190423-29190544)
chr8 (154-250)||(4462184-4462280)
chr8 (89-197)||(27857024-27857132)
chr8 (91-215)||(40422424-40422548)
chr8 (98-213)||(4463408-4463523)
chr8 (89-232)||(29575848-29575991)
chr8 (92-215)||(43866708-43866831)
chr8 (414-444)||(1021376-1021406)
chr8 (98-215)||(36623617-36623734)
[»] scaffold0182 (2 HSPs)
scaffold0182 (98-274)||(13137-13313)
scaffold0182 (92-254)||(14319-14480)
[»] chr4 (25 HSPs)
chr4 (98-257)||(55013027-55013185)
chr4 (98-207)||(52816411-52816520)
chr4 (100-207)||(38982584-38982691)
chr4 (89-207)||(56556576-56556694)
chr4 (98-207)||(38813557-38813666)
chr4 (98-207)||(38814315-38814424)
chr4 (98-207)||(56557313-56557422)
chr4 (98-207)||(52815666-52815775)
chr4 (93-199)||(53477076-53477182)
chr4 (96-233)||(54590144-54590281)
chr4 (98-182)||(23454957-23455041)
chr4 (98-207)||(23455677-23455786)
chr4 (98-211)||(54591560-54591675)
chr4 (100-232)||(22881172-22881304)
chr4 (100-232)||(22932836-22932968)
chr4 (129-215)||(8286966-8287052)
chr4 (98-215)||(47862155-47862272)
chr4 (93-215)||(22249997-22250119)
chr4 (100-250)||(22882272-22882422)
chr4 (100-250)||(22933936-22934086)
chr4 (154-199)||(10128765-10128810)
chr4 (93-213)||(13336820-13336940)
chr4 (93-197)||(20086435-20086539)
chr4 (93-197)||(47862434-47862537)
chr4 (89-197)||(53559669-53559777)
[»] chr2 (22 HSPs)
chr2 (93-265)||(20101768-20101939)
chr2 (98-233)||(20103107-20103241)
chr2 (98-207)||(29957820-29957929)
chr2 (89-199)||(20982518-20982628)
chr2 (98-207)||(20983249-20983358)
chr2 (98-206)||(29958536-29958644)
chr2 (93-215)||(24387349-24387471)
chr2 (98-207)||(25623291-25623400)
chr2 (98-207)||(25624421-25624530)
chr2 (154-252)||(23206351-23206449)
chr2 (154-252)||(23677955-23678053)
chr2 (92-175)||(24388276-24388359)
chr2 (154-252)||(23183658-23183755)
chr2 (154-252)||(23594915-23595012)
chr2 (54-94)||(6017677-6017717)
chr2 (122-207)||(21103108-21103193)
chr2 (131-211)||(19620777-19620857)
chr2 (98-197)||(16366966-16367065)
chr2 (89-215)||(9694006-9694132)
chr2 (98-195)||(10446835-10446932)
chr2 (154-215)||(28599486-28599547)
chr2 (131-215)||(5608858-5608942)
[»] chr6 (15 HSPs)
chr6 (98-253)||(17784327-17784482)
chr6 (98-207)||(4116802-4116911)
chr6 (98-207)||(4117535-4117644)
chr6 (98-207)||(33399969-33400078)
chr6 (97-207)||(1661418-1661528)
chr6 (98-207)||(14657197-14657306)
chr6 (89-205)||(33401116-33401232)
chr6 (98-207)||(14656483-14656592)
chr6 (91-251)||(5064331-5064491)
chr6 (95-215)||(5064599-5064719)
chr6 (109-179)||(8427381-8427451)
chr6 (98-211)||(8427203-8427316)
chr6 (93-215)||(13480206-13480328)
chr6 (98-215)||(23291747-23291864)
chr6 (84-197)||(13480490-13480603)
[»] scaffold0009 (2 HSPs)
scaffold0009 (93-233)||(260999-261139)
scaffold0009 (98-195)||(262441-262538)
[»] scaffold0347 (2 HSPs)
scaffold0347 (98-195)||(13612-13709)
scaffold0347 (121-195)||(14593-14667)
[»] scaffold1493 (2 HSPs)
scaffold1493 (93-197)||(591-695)
scaffold1493 (98-197)||(875-974)
[»] scaffold0233 (1 HSPs)
scaffold0233 (98-215)||(8436-8553)
[»] scaffold0206 (1 HSPs)
scaffold0206 (131-215)||(10361-10445)
[»] scaffold0202 (1 HSPs)
scaffold0202 (131-215)||(14271-14355)


Alignment Details
Target: chr3 (Bit Score: 151; Significance: 1e-79; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 93 - 271
Target Start/End: Complemental strand, 22736792 - 22736614
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||||||||||| |||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  22736792 taggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatca 22736693  T
Q  193 tttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggatttt 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22736692 tttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggtgaatgggatttt 22736614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 44476054 - 44476207
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcatttgaaa 44476153  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggca 253  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  44476154 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggca 44476207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 100 - 253
Target Start/End: Complemental strand, 44482048 - 44481895
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 44481949  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggca 253  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  44481948 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggca 44481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 22735403 - 22735535
Alignment:
Q  139 ttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggta 238  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggta 22735502  T
Q  239 attagctacgtggcatttggagaatgggatttt 271  Q
    |||||||||||||||||||| ||||||| ||||    
T  22735503 attagctacgtggcatttggtgaatggggtttt 22735535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 45278549 - 45278656
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||| |||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  200 attcgtcc 207  Q
     |||||||    
T  45278649 gttcgtcc 45278656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 48188383 - 48188490
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 48188482  T
Q  200 attcgtcc 207  Q
     |||||||    
T  48188483 gttcgtcc 48188490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 48189205 - 48189087
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||| ||||||||| ||||||||  ||||||||| |||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  48189205 aaaaaaggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattacta 48189106  T
Q  189 atcatttgaaaattcgtcc 207  Q
    ||||||||||| |||||||    
T  48189105 atcatttgaaagttcgtcc 48189087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 45279381 - 45279272
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  45279381 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 45279282  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  45279281 aagttcgtcc 45279272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 37249204 - 37249311
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| ||| |||||| |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  200 attcgtcc 207  Q
     |||||||    
T  37249304 gttcgtcc 37249311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 2944768 - 2944654
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||  |||||||||||||||||||||||||||    
T  2944768 taggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatca 2944669  T
Q  193 tttgaaaattcgtcc 207  Q
    ||||||| |||||||    
T  2944668 tttgaaagttcgtcc 2944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 11026729 - 11026620
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  |||| |||||| ||||||||||||||||||||||||||||||||    
T  11026729 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcatttga 11026630  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  11026629 aagttcgtcc 11026620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 43105929 - 43105822
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||| |||||||||| |||||||||| |||| |||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||||||||||||    
T  43105929 aaatacgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaa 43105830  T
Q  200 attcgtcc 207  Q
     |||||||    
T  43105829 gttcgtcc 43105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 1756553 - 1756662
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||| |||||||||  ||||||||| |||| ||||||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  1756553 ttaaatatatttttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 1756652  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  1756653 aagttcgtcc 1756662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 1757401 - 1757300
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| ||||||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  1757401 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 1757302  T
Q  198 aa 199  Q
    ||    
T  1757301 aa 1757300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 37249892 - 37249786
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| ||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  37249892 aaatatgcttttcatc-ctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaa 37249794  T
Q  200 attcgtcc 207  Q
     |||||||    
T  37249793 gttcgtcc 37249786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 43105236 - 43105344
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||||||| ||||  ||||||||| |||| |||||||||||||| ||||  |||||||||||  ||||||||||||||||||||||||| |||||    
T  43105236 ttaaatatgttttacatccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcttttga 43105335  T
Q  198 aaattcgtc 206  Q
    || ||||||    
T  43105336 aagttcgtc 43105344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 29193099 - 29193006
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaa 182  Q
    |||| ||| |||||||||  ||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  29193099 aaaaaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaa 29193006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 29192040 - 29192147
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| |||||||||| ||||||||||||||||||  ||||| ||||||||||| || ||||||||||||||  | ||||||||| |||    
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  200 attcgtcc 207  Q
     |||||||    
T  29192140 tttcgtcc 29192147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 11025959 - 11026049
Alignment:
Q  117 ctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 207  Q
    ||||||||||  ||| |||||||||||||| ||||  ||||||||||| |||||||||| || |||||||||||||||||||| |||||||    
T  11025959 ctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtcc 11026049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 32717207 - 32717093
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| |||||||||| || |||||||||||||||| || |  ||||||||||| |||||||||||||||||  | ||||||    
T  32717207 taggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatca 32717108  T
Q  193 tttgaaaattcgtcc 207  Q
    ||| ||| |||||||    
T  32717107 tttaaaatttcgtcc 32717093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 2943911 - 2944025
Alignment:
Q  93 taggtttaaatatgtttttc-atcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    |||| ||||||||| ||||| ||| ||| |||||| |||| |||||||||||||| ||||| ||||||||||||| |||||||||||||||    |||||    
T  2943911 taggcttaaatatgcttttctatccctgcaattataggccgtttgatttttcatc-ctgagcttactaatcctcctattttgcccctgtaaaagttaatc 2944009  T
Q  192 atttgaaaattcgtcc 207  Q
    |||||||| |||||||    
T  2944010 atttgaaagttcgtcc 2944025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 22129004 - 22129126
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| ||||||| || ||||||| | |||| ||| ||| |||||| ||||| || ||||  ||||||||||| ||| |||||||||| || || ||||||    
T  22129004 taggcttaaataggtctttcatccccgtaaatataggctatttgaattttcgtcactgaagttactaatccttccaatttgcccctgcaaatattaatca 22129103  T
Q  193 tttgaaaattcgtcctaattaca 215  Q
    |||||   |||||||||||||||    
T  22129104 tttgacttttcgtcctaattaca 22129126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 30890243 - 30890327
Alignment:
Q  131 catttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||| |||||||||||||  ||||||||| | | ||||||||  ||||| || |||||||||||||| | ||||||||||||    
T  30890243 catttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcatttgaaaaatggtcctaattaca 30890327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 22735739 - 22735692
Alignment:
Q  340 atgagggaatatgagtgaaggttcaatggagaagaagatttgttgttt 387  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  22735739 atgagggaatgagagtgaaggttcaatggagaagaagatttgatgttt 22735692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 10998254 - 10998155
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||||||||| || ||| || ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  10998254 ttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 10998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 21255856 - 21255795
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    |||||||| || ||||||||||  ||||| || |||||||||||||| | ||||||||||||    
T  21255856 ttactaatgcttccattttgccattgtaaatattaatcatttgaaaaatggtcctaattaca 21255795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 32716284 - 32716361
Alignment:
Q  130 ccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 207  Q
    ||||||||||||| |||  ||||||||||||||||| |||||| ||| |||||  | ||| ||||| ||| |||||||    
T  32716284 ccatttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtcc 32716361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 98 - 271
Target Start/End: Original strand, 73112 - 73285
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  73112 ttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttga 73211  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggatttt 271  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  73212 aaatttgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcacttggtgaatgggatttt 73285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 73489 - 73442
Alignment:
Q  340 atgagggaatatgagtgaaggttcaatggagaagaagatttgttgttt 387  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||    
T  73489 atgagggaatgagagtgaaggttcaatggagaagaagatttgatgttt 73442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 32619389 - 32619560
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 32619488  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggatttt 271  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| || |||| ||||    
T  32619489 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggtttt 32619560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 100 - 271
Target Start/End: Complemental strand, 32622451 - 32622280
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  32622451 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaataatttgaaa 32622352  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggatttt 271  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| |||| || |||| ||||    
T  32622351 attcgtcataattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggtttt 32622280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 98 - 254
Target Start/End: Complemental strand, 51935296 - 51935140
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| ||||||||  |||||||||  | |||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  51935296 ttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctgcaattactaatcatttga 51935197  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcat 254  Q
    |||||||||||||||| |||||  |||||||||||||||||||||| ||| ||||||    
T  51935196 aaattcgtcctaattaaaaaaaaatgctgaggtggagggtaattagatacatggcat 51935140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 46282074 - 46282183
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||||||| |||||||||| || | |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  46282074 ttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 46282173  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  46282174 aagttcgtcc 46282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 46282888 - 46282781
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  200 attcgtcc 207  Q
     |||||||    
T  46282788 gttcgtcc 46282781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 49093038 - 49093153
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| ||||| ||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||| ||||||||||||||    
T  49093038 ataggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatc 49093137  T
Q  192 atttgaaaattcgtcc 207  Q
    |||||||| |||||||    
T  49093138 atttgaaagttcgtcc 49093153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 50063043 - 50062936
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| |||||||||| |||||||||||||||||||||||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  200 attcgtcc 207  Q
     |||||||    
T  50062943 gttcgtcc 50062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 388 - 444
Target Start/End: Complemental strand, 6345117 - 6345061
Alignment:
Q  388 ccgtcatcgtcgtgcctttgtacatgtcattctgattactgtaactctcttcgcctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6345117 ccgtcatcgtcgtgcctttgtacatgtcattctgattactgtaactctcttcgcctc 6345061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 49093875 - 49093801
Alignment:
Q  133 tttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 207  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 49093801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 253
Target Start/End: Original strand, 32238704 - 32238859
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| || ||| ||| ||||||  ||||||| ||||  |||||||||||||||||||||| |||||| |  ||| ||||| |||    
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcctctgtaaatgttaagcatttcaaa 32238803  T
Q  200 attcgtcctaatt--acaaaaatttgctgaggtggagggtaattagctacgtggca 253  Q
    |||||||||||||  | |||||  |||||||||||| ||||||||| |||||||||    
T  32238804 attcgtcctaattaaaaaaaaaactgctgaggtggatggtaattagatacgtggca 32238859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 25066059 - 25065958
Alignment:
Q  94 aggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcat 193  Q
    |||||||||||||  ||||||| || |||||||  |||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||  | |||||||    
T  25066059 aggtttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcat 25065960  T
Q  194 tt 195  Q
    ||    
T  25065959 tt 25065958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 13295677 - 13295608
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctccc 167  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  13295677 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 50062246 - 50062315
Alignment:
Q  138 tttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 207  Q
    ||||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtcc 50062315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 13295138 - 13295235
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||||||  ||||| | |||||||||| || |||||||||||||| | ||||| ||||||||||| ||||||||||| |||||  | |||||||||    
T  13295138 ttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcattt 13295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 1047585 - 1047486
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| ||||||| |||||| ||| || ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  1047585 ttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 2828196 - 2828331
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  |||||||  || |||||| |  ||||||||||||||||  | |  ||||||||||| | |||||||| ||| || || |||||||||||    
T  2828196 ttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatttga 2828295  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtgga 233  Q
    |  |||||| |||||| ||||||||||| |||||||    
T  2828296 attttcgtcttaattaaaaaaatttgcttaggtgga 2828331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 2829602 - 2829523
Alignment:
Q  132 atttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaat 211  Q
    |||||||||||||||  |||| ||||||||||||||||||| |||||| || || ||||||||||||  |||||| ||||    
T  2829602 atttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatattaatcatttgaattttcgtcataat 2829523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 6345732 - 6345618
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| ||||| ||| |||||||  ||||||| ||||  ||||||||||| |||||||||||||| || || ||| ||||| |||    
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaa 6345633  T
Q  200 attcgtcctaattac 214  Q
     || |||||||||||    
T  6345632 tttagtcctaattac 6345618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 6344260 - 6344373
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||||||||| ||| |||||||  |||||||  |||  ||||||||||||||||||||||| || || || ||| |||||||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacatttgaaa 6344359  T
Q  200 attcgtcctaatta 213  Q
     || ||| ||||||    
T  6344360 tttggtcataatta 6344373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 25064931 - 25065033
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| ||  ||||||||||||||| ||||  ||||||||||||||||| || |||| |||  | ||||||    
T  25064931 taggattaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatca 25065030  T
Q  193 ttt 195  Q
    |||    
T  25065031 ttt 25065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 25414833 - 25414946
Alignment:
Q  84 aatacaaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaat 183  Q
    |||| ||| |||| |||||||||| |||| || ||  || ||| |||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||     
T  25414833 aataaaaattaggcttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaa 25414932  T
Q  184 tactaatcatttga 197  Q
    || |||||||||||    
T  25414933 tattaatcatttga 25414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 37152919 - 37152802
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || ||| || ||| | |||||||| ||||| |||||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  37152919 ttaaatatgtctttcgtccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 37152820  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  37152819 cttttagtcctaattaca 37152802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 10019721 - 10019637
Alignment:
Q  131 catttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||| |||||||| ||||  ||||||||||| ||||||||||  || || || |||||||||||||| | ||| ||||||||    
T  10019721 catttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcataattaca 10019637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 46545093 - 46544998
Alignment:
Q  117 ctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatt 212  Q
    |||||| ||| || |||||||  |||| || ||||  ||||||||||| |||||||||| ||| || || |||||||||||||| | |||||||||    
T  46545093 ctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaaaatagtcctaatt 46544998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 2953845 - 2953728
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || ||| || ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  2953845 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 2953746  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  2953745 tttttggtcctaattaca 2953728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 24701650 - 24701533
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||| || ||||||| ||| || |||  ||||||||| ||||| || ||||  ||||||||||| ||||||||||  |  || || ||| |||||||    
T  24701650 ttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaaccatttga 24701551  T
Q  198 aaattcgtcctaattaca 215  Q
    ||| | ||||||||||||    
T  24701550 aaaatggtcctaattaca 24701533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 32619767 - 32619730
Alignment:
Q  340 atgagggaatatgagtgaaggttcaatggagaagaaga 377  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  32619767 atgagggaatgcgagtgaaggttcaatggagaagaaga 32619730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 32622073 - 32622110
Alignment:
Q  340 atgagggaatatgagtgaaggttcaatggagaagaaga 377  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  32622073 atgagggaatgcgagtgaaggttcaatggagaagaaga 32622110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 5e-66; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 98 - 265
Target Start/End: Original strand, 37284112 - 37284279
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| |    
T  37284112 ttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatttta 37284211  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgg 265  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  37284212 aaattcgtcctaattacaaaaatttgttgaggtggagggtaattagatacgtggcatttggtgaatgg 37284279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 98 - 265
Target Start/End: Complemental strand, 37289407 - 37289240
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| |    
T  37289407 ttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatttta 37289308  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgg 265  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||    
T  37289307 aaattcgtcctaattacaaaaatttgttgaggtggagggtaattagatacgtggcatttggtgaatgg 37289240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 27480844 - 27480735
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  27480844 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatttga 27480745  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  27480744 aagttcgtcc 27480735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 27479990 - 27480099
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| ||| |||||| ||||  ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  27479990 ttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatttga 27480089  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  27480090 aagttcgtcc 27480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 22661362 - 22661469
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||| |||| ||||||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  200 attcgtcc 207  Q
     |||||||    
T  22661462 gttcgtcc 22661469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 12643094 - 12643184
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctg 179  Q
    |||| ||| |||||||||  ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  12643094 aaaaaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctg 12643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 47558033 - 47558142
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| || ||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||| ||||| |    
T  47558033 ttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccatttaa 47558132  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  47558133 aatttcgtcc 47558142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 4227275 - 4227160
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| |||||||||  ||||||| |||||||||| |||||||||||||||||||  |||| |||||||||||||||||||| ||||||||  | ||| |    
T  4227275 ataggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaacc 4227176  T
Q  192 atttgaaaattcgtcc 207  Q
    |||| ||| |||||||    
T  4227175 atttaaaatttcgtcc 4227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 213
Target Start/End: Original strand, 7158229 - 7158349
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||  |||||| |||||||||||||||||||  |||  ||||||||||| ||||||||||||||||| || ||||||    
T  7158229 taggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatca 7158328  T
Q  193 tttgaaaattcgtcctaatta 213  Q
    ||||| |||  ||||||||||    
T  7158329 tttgagaatcggtcctaatta 7158349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 4226123 - 4226238
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| |||||||||| |||||||||||| |||| |  |||| ||||||||||| |||||||||||||||||  | ||||||    
T  4226123 taggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatca 4226222  T
Q  193 tttgaaaattcgtcct 208  Q
    ||| ||| ||||||||    
T  4226223 tttaaaatttcgtcct 4226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 12644230 - 12644121
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| || ||||||  ||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||  | ||||||||| |    
T  12644230 ttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcatttaa 12644131  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  12644130 aatttcgtcc 12644121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 45915905 - 45915808
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||| || || ||||||||||||| ||||| |||||||||  | |||||||||    
T  45915905 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcattt 45915808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 12929285 - 12929389
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| || ||| ||| ||||||||||||||| ||||  |||||||||||||||||||||||||| || || ||||||    
T  12929285 taggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatca 12929384  T
Q  193 tttga 197  Q
    |||||    
T  12929385 tttga 12929389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 12930770 - 12930874
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| || |||||||||||||||| ||||  ||||||||||| |||||||||||||| || || ||||||    
T  12930770 taggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatca 12930869  T
Q  193 tttga 197  Q
    |||||    
T  12930870 tttga 12930874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 38643547 - 38643650
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| |||||||||  ||||||| ||| |||||| |||||||||||||||||||  |||  ||||||||||||||||||||| |||||||  | |||||    
T  38643547 ataggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatc 38643646  T
Q  192 attt 195  Q
    ||||    
T  38643647 attt 38643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 45914524 - 45914636
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| |||||||||| ||||||||||||||||||| || || |||||||| ||| ||||||| ||||||||  | ||||||    
T  45914524 taggcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttg-ccctgtaaaaattaatca 45914621  T
Q  193 tttgaaaattcgtcc 207  Q
    ||| ||| |||||||    
T  45914622 tttaaaatttcgtcc 45914636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 250
Target Start/End: Complemental strand, 31695709 - 31695559
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| || ||| || |||||||  ||||||| || |  ||||||||||| |||||||  ||||| ||||  |||||| ||||||    
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 31695610  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtg 250  Q
     || |||||||| |||    ||||||||||||||||||||||||| |||||    
T  31695609 tttggtcctaatcacatttttttgctgaggtggagggtaattagcaacgtg 31695559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 37563735 - 37563636
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || |||||| ||| |||||||||| ||||| || ||||  ||||||||||| ||| |||||||||| || || ||||| |||||    
T  37563735 ttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcttttga 37563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 43937892 - 43937996
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||| ||  ||||| ||| || ||||||| |||||||| ||||  ||||||||||| ||| | |||||||| || || ||||||    
T  43937892 taggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatca 43937991  T
Q  193 tttga 197  Q
    |||||    
T  43937992 tttga 43937996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 31694465 - 31694608
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||||| |||||||  ||||||| ||| || ||| | ||||||||  ||||||| || | |||||||||||||||||| |  || || ||||  ||    
T  31694465 aaaaaaggttaaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgtta 31694564  T
Q  189 atcatttgaaaattcgtcctaattacaaaaatttgctgaggtgg 232  Q
    |||| |||||| || ||||||||||||    |||||||||||||    
T  31694565 atcacttgaaatttggtcctaattacatttttttgctgaggtgg 31694608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 37563352 - 37563456
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||  || ||| || ||| |||||||||| ||||| || |||| |||||||||||| | | | |||||||| || || ||||||    
T  37563352 taggcttaaatatgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatca 37563451  T
Q  193 tttga 197  Q
    |||||    
T  37563452 tttga 37563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 47739039 - 47738979
Alignment:
Q  153 tttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatta 213  Q
    |||||||||||||||| |||||||||| || || |||||| || ||| || ||||||||||    
T  47739039 tttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatta 47738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 5e-66; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 100 - 271
Target Start/End: Complemental strand, 21978112 - 21977941
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcatttgaaa 21978013  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggatttt 271  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| || |||| ||||    
T  21978012 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggtttt 21977941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 21972095 - 21972265
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21972095 aaatatgtttttcatccctgtaattatgggccatttgatttttcatc-ctcagcttactaatcctcccattttgctcctgtaattactaatcatttgaaa 21972193  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggatttt 271  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| || |||| ||||    
T  21972194 attcgtcctaattacaaaattttgctgaggtggagggtgattagctacgtggcacttggtgactggggtttt 21972265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 93 - 254
Target Start/End: Original strand, 8654105 - 8654267
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||||||||||| |||||||||| || ||||||||||||||||  |||| |||||||||||||||||||| ||||| ||||||||||||    
T  8654105 taggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgcaattactaatca 8654204  T
Q  193 tttgaaaattcgtcctaatt-acaaaaatttgctgaggtggagggtaattagctacgtggcat 254  Q
    |||||||||||||||||||| | |||||  || ||||||||||||||||||| ||||||||||    
T  8654205 tttgaaaattcgtcctaattaaaaaaaaaatgttgaggtggagggtaattagatacgtggcat 8654267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 20072973 - 20072857
Alignment:
Q  91 aataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaat 190  Q
    |||||| ||||||||| |||||||| |||||||||| || | |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||    
T  20072973 aataggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaat 20072874  T
Q  191 catttgaaaattcgtcc 207  Q
    ||||||||| |||||||    
T  20072873 catttgaaagttcgtcc 20072857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 36476770 - 36476877
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| ||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  200 attcgtcc 207  Q
     |||||||    
T  36476870 gttcgtcc 36476877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 36477471 - 36477364
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| ||| |||||| |||| ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  200 attcgtcc 207  Q
     |||||||    
T  36477371 gttcgtcc 36477364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 16533722 - 16533613
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| || ||||||| |||| |||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  16533722 ttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcatttga 16533623  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  16533622 aagttcgtcc 16533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 20072124 - 20072233
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  20072124 ttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttga 20072223  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  20072224 aagttcgtcc 20072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 39181060 - 39181169
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| ||||||||||  ||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  39181060 ttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181159  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  39181160 aagttcgtcc 39181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 39181893 - 39181784
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||| ||| |||||||||| || | |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  39181893 ttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181794  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  39181793 aagttcgtcc 39181784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 14744827 - 14744692
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| ||| ||||||  | |||||||||||||||| ||||  |||||||||||||||||||||||||| || || |||||||||||    
T  14744827 ttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 14744728  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtgga 233  Q
    |  ||||||||||||| ||||||||||| |||||||    
T  14744727 attttcgtcctaattaaaaaaatttgcttaggtgga 14744692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 16532898 - 16533005
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  200 attcgtcc 207  Q
     |||||||    
T  16532998 gttcgtcc 16533005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 20856929 - 20857044
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    |||||    
T  20856929 ataggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatc 20857028  T
Q  192 atttgaaaattcgtcc 207  Q
    |||||||| |||||||    
T  20857029 atttgaaatttcgtcc 20857044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 22870565 - 22870451
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| |||||||||  ||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  | |||||    
T  22870565 ataggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 22870466  T
Q  192 atttgaaaattcgtc 206  Q
    |||| ||| ||||||    
T  22870465 atttaaaatttcgtc 22870451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 207
Target Start/End: Complemental strand, 20857649 - 20857535
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| ||||||||| ||||||||  ||||||||| |||| |||||||||||||  || || |||||||||||||||||||||||||||||    ||||||    
T  20857649 taggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatca 20857550  T
Q  193 tttgaaaattcgtcc 207  Q
    ||||||| |||||||    
T  20857549 tttgaaatttcgtcc 20857535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 22869619 - 22869717
Alignment:
Q  109 tttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 207  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  | ||| ||||| ||| |||||||    
T  22869619 tttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatttcgtcc 22869717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 31107917 - 31108015
Alignment:
Q  81 tgtaatacaaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctg 179  Q
    ||||||| |||| ||| |||||||||  ||||||| ||| |||||| ||||||||||||||||||| ||||  ||||||||||||||||||| ||||||    
T  31107917 tgtaataaaaaagaggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttacccctg 31108015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 32052218 - 32052326
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||||||| ||||||||||||||| || |||||| ||| || ||||||| ||||| || ||||  ||||||||||| ||| |  ||||||| || || ||    
T  32052218 aaaataggcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatatta 32052317  T
Q  189 atcatttga 197  Q
    |||||||||    
T  32052318 atcatttga 32052326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 39402210 - 39402146
Alignment:
Q  133 tttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||| |||   |||||||||||||||||||||||||| || || |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcatttga 39402146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 8673853 - 8673739
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| || ||| ||||||||||  |||||||  |||  || ||||| |||||||||||||| || ||||  |||||||||||||    
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttgcaattgttaatcatttgaaa 8673754  T
Q  200 attcgtcctaattac 214  Q
     ||| ||||||||||    
T  8673753 tttcatcctaattac 8673739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 21979076 - 21978955
Alignment:
Q  90 aaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaa 189  Q
    ||||||| |||||||||  ||||||| ||| ||||||  ||||||||||||||||||   ||  ||||||||||||| |||||  ||||||||  | |||    
T  21979076 aaataggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaa 21978977  T
Q  190 tcatttgaaaattcgtcctaat 211  Q
    | ||||| || || ||||||||    
T  21978976 taatttggaatttagtcctaat 21978955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 25253089 - 25253206
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| ||||||| ||| || ||| |  ||||||| ||||| || ||||  ||||||||||| ||| |||||||||| || || |||||||||||    
T  25253089 ttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 25253188  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  25253189 cttttggtcctaattaca 25253206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 25316879 - 25316996
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| ||||||| ||| || ||| |  ||||||| ||||| || ||||  ||||||||||| ||| |||||||||| || || |||||||||||    
T  25316879 ttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 25316978  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  25316979 cttttggtcctaattaca 25316996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 21978167 - 21978211
Alignment:
Q  171 ttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||||||||  | |||||||||||||||||||||||||||||    
T  21978167 ttgcccctgtaaaaattaatcatttgaaaattcgtcctaattaca 21978211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 37944990 - 37945114
Alignment:
Q  91 aataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaat 190  Q
    |||||| ||||||| || |||| ||  ||||| ||| || ||||||| ||||| || ||||  ||||||||||| ||| |||||||||| || || ||||    
T  37944990 aataggcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaat 37945089  T
Q  191 catttgaaaattcgtcctaattaca 215  Q
    |||||||   || ||||||||||||    
T  37945090 catttgacttttggtcctaattaca 37945114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 14745445 - 14745568
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| ||||||| || |||| || ||| || ||| || ||||||| |||||||| ||||  ||||||||||| ||| | |||||||| || || |||||    
T  14745445 ataggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatc 14745544  T
Q  192 atttgaaaattcgtcctaattaca 215  Q
    ||||||   || ||||||||||||    
T  14745545 atttgacttttggtcctaattaca 14745568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 25253475 - 25253368
Alignment:
Q  90 aaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaa 189  Q
    ||||||| |||||||||| |||| || ||| || ||| || ||||||| ||||| || ||||  ||||||||||| ||| | ||||| || || ||||||    
T  25253475 aaataggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaa 25253376  T
Q  190 tcatttga 197  Q
    ||||||||    
T  25253375 tcatttga 25253368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 25317266 - 25317159
Alignment:
Q  90 aaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaa 189  Q
    ||||||| |||||||||| |||| || ||| || ||| || ||||||| ||||| || ||||  ||||||||||| ||| | ||||| || || ||||||    
T  25317266 aaataggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaa 25317167  T
Q  190 tcatttga 197  Q
    ||||||||    
T  25317166 tcatttga 25317159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 31108439 - 31108338
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    ||||||||||||||| ||||||| ||| || ||| | | |||||||||||||||  |||  ||||||||| | |||||||  |||||||| || ||||||    
T  31108439 taggtttaaatatgtatttcatccctgcaaatatagac-atttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatca 31108341  T
Q  193 ttt 195  Q
    |||    
T  31108340 ttt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 22024195 - 22024134
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||||||| ||| |||||| ||| || || |||||||||||||| | ||||||||||||    
T  22024195 ttactaatccttccaatttgccactgcaaatattaatcatttgaaaaatggtcctaattaca 22024134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 32052605 - 32052488
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || ||| || ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  32052605 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 32052506  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  32052505 cttttggtcctaattaca 32052488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 33735311 - 33735415
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||| || ||  || ||| |||||||||||||||| || ||||  ||||||||||| ||| | || ||||| || || ||||||    
T  33735311 taggcttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatca 33735410  T
Q  193 tttga 197  Q
    |||||    
T  33735411 tttga 33735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 3e-64; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 89 - 265
Target Start/End: Complemental strand, 33497722 - 33497546
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||| ||||||||| |||||||| |||||||||| || ||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  33497722 aaaaaaggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctgcaattacta 33497623  T
Q  189 atcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  33497622 atcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagatacgtggcattttgtgaatgg 33497546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 99 - 265
Target Start/End: Original strand, 33497020 - 33497186
Alignment:
Q  99 taaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaa 198  Q
    |||||||| |||||||   ||||||||| || |||||||||||||||   |||  ||||||||||| ||||||||||| || ||||||||||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttgcaattactaatcatttgaa 33497119  T
Q  199 aattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  33497120 aattcgtcctaattacaaaaatttgctgaggtggagggtaattagatacgtgacatttggtgaatgg 33497186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 98 - 253
Target Start/End: Original strand, 38598967 - 38599122
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| ||| |||||| ||||||||||||||||||| ||||  |||||||||||| ||||||||||||| || || |||||||||||    
T  38598967 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 38599066  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggca 253  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||| || ||||||    
T  38599067 aaattcgtcctaattaaaaaaatatgctgaggtggatggtaattagataagtggca 38599122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 34665768 - 34665882
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||    
T  34665768 taggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatca 34665867  T
Q  193 tttgaaaattcgtcc 207  Q
    ||||||| |||||||    
T  34665868 tttgaaagttcgtcc 34665882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 34666635 - 34666529
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| ||||  ||||||||||| |||||||| |||||||||||||||||||||||||    
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttg-ccctgtaattactaatcatttgaaa 34666537  T
Q  200 attcgtcc 207  Q
     |||||||    
T  34666536 gttcgtcc 34666529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 34214626 - 34214516
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttca-tctctgagtttactaatcctcccattttgcccctgtaattactaatcatttg 196  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||| || ||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  34214626 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 34214527  T
Q  197 aaaattcgtcc 207  Q
    ||| |||||||    
T  34214526 aaagttcgtcc 34214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 1231529 - 1231646
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| ||  |||||| |||| ||||||||||||||  |||| ||||||||||||||||||| |||||||||  | |||||||||||    
T  1231529 ttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcatttga 1231628  T
Q  198 aaattcgtcctaattaca 215  Q
    ||||||||||||||||||    
T  1231629 aaattcgtcctaattaca 1231646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 7393231 - 7393088
Alignment:
Q  109 tttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 208  Q
    ||||||| ||| |||||| || |||||||||||||||| ||||  |||||||||||||||||||  ||||| || || ||||||||||||| || |||||    
T  7393231 tttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcct 7393132  T
Q  209 aattacaaaaatttgctgaggtggagggtaattagctacgtggc 252  Q
    ||| ||||   ||||||||||||||| || |||||| |||||||    
T  7393131 aatcacaattgtttgctgaggtggagagtgattagcaacgtggc 7393088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 34213767 - 34213876
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| ||| |||||| |||| |||||||||||||| ||||| ||||||||||||| |||||||||||||||    |||||||||||    
T  34213767 ttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttga 34213866  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  34213867 aagttcgtcc 34213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 206
Target Start/End: Complemental strand, 1232899 - 1232788
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| |||||||||| ||||||||||||||||||| ||||| ||    |||||||||||||||||||||||  | ||||||    
T  1232899 taggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatca 1232802  T
Q  193 tttgaaaattcgtc 206  Q
    ||||||||||||||    
T  1232801 tttgaaaattcgtc 1232788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 109 - 253
Target Start/End: Complemental strand, 24379082 - 24378939
Alignment:
Q  109 tttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcct 208  Q
    ||||||| ||| ||||| ||| |||||||| |||||||  |||  ||||||||||||| |||||||||||| || ||  || ||||| ||||||||||||    
T  24379082 tttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctgcaaataaaaagcattttaaaattcgtcct 24378983  T
Q  209 aattacaaaaatttgctgaggtggagggtaattagctacgtggca 253  Q
    ||||| ||||| ||| ||||||||| |  |||||| |||||||||    
T  24378982 aatta-aaaaaattgttgaggtggatgaaaattagatacgtggca 24378939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 25288178 - 25288074
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| || |||||||||||||||| ||||  |||||||||||| ||||||||||||| || || ||||||    
T  25288178 taggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatca 25288079  T
Q  193 tttga 197  Q
    |||||    
T  25288078 tttga 25288074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 4970130 - 4970244
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| ||||| ||| |||||||  ||||||| ||||  ||||||||||| |||||||||||||| || || ||| |||||||||    
T  4970130 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttgaaa 4970229  T
Q  200 attcgtcctaattac 214  Q
     || |||||||||||    
T  4970230 tttagtcctaattac 4970244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 24377207 - 24377305
Alignment:
Q  121 aattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaa 219  Q
    ||||| ||| |||||||  ||||||| ||||  ||||||||||||||||||| |||||| || || ||| ||||| ||||||||||||||||| |||||    
T  24377207 aattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagcatttcaaaattcgtcctaattaaaaaaa 24377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 7392250 - 7392365
Alignment:
Q  137 atttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggaggg 236  Q
    |||||||||| ||||  |||||||||||||||||||  ||||| || || ||||||||||||| || |||||||| || |   ||||||||||||| | |    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcctaatcacgattgtttgctgaggtggcgag 7392349  T
Q  237 taattagctacgtggc 252  Q
    | |||||| |||||||    
T  7392350 tgattagcaacgtggc 7392365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 29574747 - 29574897
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| || ||| || |||||||  ||||||| || |  ||||||||||| |||||||  ||||| ||||  |||||| ||||||    
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 29574846  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtg 250  Q
     || |||||||| |||    ||||||||||||||||||||||||| |||||    
T  29574847 tttggtcctaatcacatttttttgctgaggtggagggtaattagcaacgtg 29574897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 25287795 - 25287912
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || |||||| ||| |||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  25287795 ttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 25287894  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  25287895 cttttggtcctaattaca 25287912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 27437616 - 27437503
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| ||| || ||| |||| ||||| ||||| || ||||  ||||||||| |  ||||||||| ||| |||||||||||||||||    
T  27437616 ttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttga 27437517  T
Q  198 aaattcgtcctaat 211  Q
    || || ||||||||    
T  27437516 aatttagtcctaat 27437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 27436566 - 27436681
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| ||| || ||| || | ||||| ||||| || ||||  ||||||||| |  ||||||||| ||| |||||||||||||||||    
T  27436566 ttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttga 27436665  T
Q  198 aaattcgtcctaatta 213  Q
    || || ||||||||||    
T  27436666 aatttagtcctaatta 27436681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 4970729 - 4970767
Alignment:
Q  406 tgtacatgtcattctgattactgtaactctcttcgcctc 444  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  4970729 tgtacatgtcattctgattactataactctcttcgcctc 4970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 29190544 - 29190423
Alignment:
Q  94 aggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcat 193  Q
    ||||||||||| || |||| || ||| || ||| | |||||||| |||| ||||||||  ||||||||||| ||| | |||||||| || || |||||||    
T  29190544 aggtttaaataggtctttcgtccctgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatcat 29190445  T
Q  194 ttgaaaattcgtcctaattaca 215  Q
    ||||   || ||||||||||||    
T  29190444 ttgacttttagtcctaattaca 29190423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 4462184 - 4462280
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtg 250  Q
    ||||||||||||||||| |  ||||| ||||  |||||| |||||| || |||||||| |||    |||||||||||||||||||||| || |||||    
T  4462184 ttactaatcctcccattctttccctgcaattgttaatcacttgaaatttggtcctaatcacatttttttgctgaggtggagggtaattggcgacgtg 4462280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 27857132 - 27857024
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    ||||||||||||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  ||||||||| | ||| | ||||| || || || ||    
T  27857132 aaaataggtttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatatta 27857033  T
Q  189 atcatttga 197  Q
    |||||||||    
T  27857032 atcatttga 27857024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 40422548 - 40422424
Alignment:
Q  91 aataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaat 190  Q
    |||||| ||||||| || ||||||| ||| || ||| || ||||||| ||||| || ||||  ||||||||||| | | | |||| ||| || || ||||    
T  40422548 aataggcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaat 40422449  T
Q  191 catttgaaaattcgtcctaattaca 215  Q
    |||||||||| | ||||||||||||    
T  40422448 catttgaaaaatggtcctaattaca 40422424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 4463523 - 4463408
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| ||| || ||| ||||||||||  ||||||| ||||  ||||||||||||| ||| |  ||||| ||||  |||||| ||||    
T  4463523 ttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcctattctttccctgcaattgttaatcacttga 4463424  T
Q  198 aaattcgtcctaatta 213  Q
    || || ||||||||||    
T  4463423 aatttggtcctaatta 4463408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 29575991 - 29575848
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||||| |||||||  ||||||| ||| || ||| | ||||||||  ||||||| || | |||||||||||||||||| |  || || ||||  ||    
T  29575991 aaaaaaggttaaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgtta 29575892  T
Q  189 atcatttgaaaattcgtcctaattacaaaaatttgctgaggtgg 232  Q
    |||| |||||| || ||||||||||||    |||||||||||||    
T  29575891 atcacttgaaatttggtcctaattacatttttttgctgaggtgg 29575848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 43866708 - 43866831
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| |||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  |||||||| || ||| | |||||||| || || |||||    
T  43866708 ataggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatc 43866807  T
Q  192 atttgaaaattcgtcctaattaca 215  Q
    ||||||   || ||||||||||||    
T  43866808 atttgacttttggtcctaattaca 43866831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Original strand, 1021376 - 1021406
Alignment:
Q  414 tcattctgattactgtaactctcttcgcctc 444  Q
    |||||||||||||||||||||||||||||||    
T  1021376 tcattctgattactgtaactctcttcgcctc 1021406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 36623734 - 36623617
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  |||||||| || ||| | |||||||| || || |||||||||||    
T  36623734 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 36623635  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  36623634 cttttggtcctaattaca 36623617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 121; Significance: 8e-62; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 98 - 274
Target Start/End: Original strand, 13137 - 13313
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  13137 ttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaattactaatcatttga 13236  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgggattttttc 274  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||| ||||||  |||||||    
T  13237 aaattcgtcctaattaaaaaaaattgctgaggtggagggtaattagatacgtggcatctggcgaatggttttttttc 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 14480 - 14319
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatc 191  Q
    ||||| ||||||||| |||||| | |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||    
T  14480 ataggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctgcaattactaatc 14381  T
Q  192 atttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcat 254  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||||| || |||||||    
T  14380 atttgaaaattcatcctaatta-aaaaaaatgctgaggtggagggtaattagatatgtggcat 14319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 8e-59; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 98 - 257
Target Start/End: Complemental strand, 55013185 - 55013027
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| ||||||||  ||||||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  55013185 ttaaatatgcttttcatccatgtaattataggctatttgatttttcatc-ctgagcttactaatcctcccagtttgcccctgtaattactaatcatttga 55013087  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttg 257  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  55013086 aaattcgtcctaattacaaaaatttgccgaggtggagggtaattaggtacgtggcatttg 55013027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 52816520 - 52816411
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  52816520 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatttga 52816421  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  52816420 aagttcgtcc 52816411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 38982691 - 38982584
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    ||||||| |||||||| ||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  200 attcgtcc 207  Q
     |||||||    
T  38982591 gttcgtcc 38982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 56556576 - 56556694
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||| ||||||||| |||||||| |||||||||| |||| ||||||||||||||  |||  ||||||||||| |||||||||||||||||||||||    
T  56556576 aaaaaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattacta 56556675  T
Q  189 atcatttgaaaattcgtcc 207  Q
    ||||||||||| |||||||    
T  56556676 atcatttgaaagttcgtcc 56556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 38813557 - 38813666
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||| ||||||    
T  38813557 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataatttga 38813656  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  38813657 aagttcgtcc 38813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 38814424 - 38814315
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| ||||||||  ||||||| | |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  38814424 ttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 38814325  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  38814324 aagttcgtcc 38814315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 56557422 - 56557313
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| || ||||||| |||| ||||||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  56557422 ttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 56557323  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  56557322 aagttcgtcc 56557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 52815666 - 52815775
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||| ||| ||||  |||||||||||  |||||||||||||||||||||||||| ||||    
T  52815666 ttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatcacttga 52815765  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  52815766 aagttcgtcc 52815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 53477182 - 53477076
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| || |||||||||||||||||||||  |||||||||||||||||||||||||| || || ||||||    
T  53477182 taggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatca 53477083  T
Q  193 tttgaaa 199  Q
    |||||||    
T  53477082 tttgaaa 53477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 233
Target Start/End: Original strand, 54590144 - 54590281
Alignment:
Q  96 gtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||||||||  ||||||| ||| |||||| || ||||||||||||||||| |||  |||||||| || |||||||||| ||  || || |||||||||    
T  54590144 gtttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcattt 54590243  T
Q  196 gaaaattcgtcctaattacaaaaatttgctgaggtgga 233  Q
    |||  ||||||||||||| ||||||||||| |||||||    
T  54590244 gaattttcgtcctaattaaaaaaatttgcttaggtgga 54590281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 23454957 - 23455041
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaa 182  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  23454957 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaa 23455041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 23455786 - 23455677
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| |||||||||| || |||||||||||||||  ||||| |||||||||||||||||||||| ||||||  | ||||||||| |    
T  23455786 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcatttca 23455687  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  23455686 aatttcgtcc 23455677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 54591675 - 54591560
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctg--taattactaatcattt 195  Q
    |||||||||  ||||||| ||| |||||| |  |||||||||||||||| ||||  ||||||| ||||||||||||||||||   || || |||||||||    
T  54591675 ttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaatattaatcattt 54591576  T
Q  196 gaaaattcgtcctaat 211  Q
    |||  |||||||||||    
T  54591575 gaattttcgtcctaat 54591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 22881172 - 22881304
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| |||||| ||| ||||||||||  |||||||||||  |||||||||||||||||| |   |||  ||||  |||||| ||||||    
T  22881172 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcacttgaaa 22881271  T
Q  200 attcgtcctaattacaaaaatttgctgaggtgg 232  Q
     || ||||||||||||    |||||||||||||    
T  22881272 tttggtcctaattacatttttttgctgaggtgg 22881304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 22932836 - 22932968
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| |||||| ||| ||||||||||  |||||||||||  |||||||||||||||||| |   |||  ||||  |||||| ||||||    
T  22932836 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcacttgaaa 22932935  T
Q  200 attcgtcctaattacaaaaatttgctgaggtgg 232  Q
     || ||||||||||||    |||||||||||||    
T  22932936 tttggtcctaattacatttttttgctgaggtgg 22932968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 8286966 - 8287052
Alignment:
Q  129 gccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||||| ||||| |||||||  ||| ||||||| ||||||||||  || || || |||||||||||||| | ||||||||||||    
T  8286966 gccatttgaattttcgtctctgaagttaataatccttccattttgccattgcaaatattaatcatttgaaaaatggtcctaattaca 8287052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 47862155 - 47862272
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||| || ||||||| ||| || |||  | ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| || ||||||||||||||    
T  47862155 ttaaataggtctttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcatttga 47862254  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  47862255 ctttttgtcctaattaca 47862272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 22250119 - 22249997
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  |||||||| || ||| | |||||||| || || ||||||    
T  22250119 taggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatca 22250020  T
Q  193 tttgaaaattcgtcctaattaca 215  Q
    |||||   || ||||||||||||    
T  22250019 tttgacttttagtcctaattaca 22249997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 250
Target Start/End: Complemental strand, 22882422 - 22882272
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| || ||| || |||||||  ||||||| ||||  ||| ||||||||||||| |  ||||| ||||  |||||| || |||    
T  22882422 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcacttcaaa 22882323  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtg 250  Q
     || ||| |||| |||    ||||||||||||||||||||||||| |||||    
T  22882322 tttggtcataatcacatttttttgctgaggtggagggtaattagcgacgtg 22882272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 250
Target Start/End: Complemental strand, 22934086 - 22933936
Alignment:
Q  100 aaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||  ||||||| ||| || ||| || |||||||  ||||||| ||||  ||| ||||||||||||| |  ||||| ||||  |||||| || |||    
T  22934086 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatcacttcaaa 22933987  T
Q  200 attcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtg 250  Q
     || ||| |||| |||    ||||||||||||||||||||||||| |||||    
T  22933986 tttggtcataatcacatttttttgctgaggtggagggtaattagcgacgtg 22933936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 10128765 - 10128810
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaa 199  Q
    |||||||||||||||||||||| ||  ||||| |||||||||||||    
T  10128765 ttactaatcctcccattttgccactacaattattaatcatttgaaa 10128810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 213
Target Start/End: Complemental strand, 13336940 - 13336820
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| || ||| || |||||||  ||||||| ||||  ||||||||||||||||| |  ||||| ||||  ||||||    
T  13336940 taggcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccattctttccctgcaattgttaatca 13336841  T
Q  193 tttgaaaattcgtcctaatta 213  Q
     |||||| || ||||| ||||    
T  13336840 cttgaaatttggtccttatta 13336820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 20086435 - 20086539
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||| || || ||| ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || ||||||    
T  20086435 taggcttaaatatgtctttcgtctctataaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 20086534  T
Q  193 tttga 197  Q
    |||||    
T  20086535 tttga 20086539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 47862537 - 47862434
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||| || |||||| ||| |||||||||| ||||| ||  |||  ||||||||||| | | |||||||||| || || ||||||    
T  47862537 taggcttaaatatgtctttcgtc-ctgtaaatataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatca 47862439  T
Q  193 tttga 197  Q
    |||||    
T  47862438 tttga 47862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 53559777 - 53559669
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||| |||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  ||||||||| | ||| | |||||||| || || ||    
T  53559777 aaaaaaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatatta 53559678  T
Q  189 atcatttga 197  Q
    |||||||||    
T  53559677 atcatttga 53559669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 93 - 265
Target Start/End: Original strand, 20101768 - 20101939
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| ||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||    
T  20101768 taggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattaataatca 20101867  T
Q  193 tttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggcatttggagaatgg 265  Q
    ||||||||||||||||||||| ||||| ||||||||||||| | ||||||| |||||||||| ||| ||||||    
T  20101868 tttgaaaattcgtcctaatta-aaaaaattgctgaggtggatgctaattagatacgtggcatctggcgaatgg 20101939  T

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Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 20103241 - 20103107
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||| ||| |||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  20103241 ttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccatgcaattactaatcatttga 20103142  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtgga 233  Q
    |||||||||||||||| ||||| |||||||||||||    
T  20103141 aaattcgtcctaatta-aaaaaattgctgaggtgga 20103107  T

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Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 29957820 - 29957929
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  29957820 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 29957919  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  29957920 aagttcgtcc 29957929  T

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Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 20982518 - 20982628
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||| ||| ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||    
T  20982518 aaaaaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattacta 20982617  T
Q  189 atcatttgaaa 199  Q
    |||||||||||    
T  20982618 atcatttgaaa 20982628  T

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Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 20983358 - 20983249
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| | || |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  20983358 ttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20983259  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  20983258 aagttcgtcc 20983249  T

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Target: chr2; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 29958644 - 29958536
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||||||| |||||||||| |||  |||||||||||||| ||||  ||||||||||| ||||||||||||| ||||||||||||||||||    
T  29958644 ttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcatttga 29958545  T
Q  198 aaattcgtc 206  Q
    || ||||||    
T  29958544 aagttcgtc 29958536  T

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Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 24387349 - 24387471
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| |||||||| |||||||||| ||||| |||||||||||||||||||| || |||||  | ||||||    
T  24387349 taggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatca 24387448  T
Q  193 tttgaaaattcgtcctaattaca 215  Q
    |||||||||||||||||||||||    
T  24387449 tttgaaaattcgtcctaattaca 24387471  T

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Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 25623291 - 25623400
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| || ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  | ||||||||| |    
T  25623291 ttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 25623390  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  25623391 aatttcgtcc 25623400  T

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Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 25624530 - 25624421
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||  ||||||| |||||||||| || |||||||||||||||| ||||| ||||||||||||||||||| |||||||||  | ||||||||| |    
T  25624530 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcatttaa 25624431  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  25624430 aatttcgtcc 25624421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 23206449 - 23206351
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggc 252  Q
    |||||||||||| ||||||||| ||| || || ||| |||| |||||||||||||||||| ||||||||||| | ||||| ||||||||| || |||||    
T  23206449 ttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtcctaattaaaaaaatttgcttacgtggatggtaattagatatgtggc 23206351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 23678053 - 23677955
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggc 252  Q
    |||||||||||| ||||||||| ||| || || ||| |||| |||||||||||||||||| ||||||||||| | ||||| ||||||||| || |||||    
T  23678053 ttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtcctaattaaaaaaatttgcttacgtggatggtaattagatatgtggc 23677955  T

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Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 24388359 - 24388276
Alignment:
Q  92 ataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcc 175  Q
    ||||| |||||||||  ||||||| ||| ||||||  || ||||||||||||||| ||||| ||||||||||| ||||||||||    
T  24388359 ataggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgcc 24388276  T

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Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 23183658 - 23183755
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggc 252  Q
    ||||||||||||| |||||||| ||| || || ||| ||||| ||||||||||||||||| ||   |||||||||||||| ||||| ||| ||||||||    
T  23183658 ttactaatcctcctattttgccactgcaaatattaagcatttaaaaattcgtcctaatta-aattttttgctgaggtggatggtaagtagttacgtggc 23183755  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 23594915 - 23595012
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggc 252  Q
    ||||||||||||| |||||||| ||| || || ||| ||||| ||||||||||||||||| ||   |||||||||||||| ||||| ||| ||||||||    
T  23594915 ttactaatcctcctattttgccactgcaaatattaagcatttaaaaattcgtcctaatta-aattttttgctgaggtggatggtaagtagttacgtggc 23595012  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 6017677 - 6017717
Alignment:
Q  54 attgcagcgaaagactctagtgaaagatgtaatacaaaata 94  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  6017677 attgcagcgaaagactctcgtgaaagatgtaatacaaaata 6017717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 21103108 - 21103193
Alignment:
Q  122 attatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 207  Q
    ||||| |||| |||| ||||||||| ||||  |||||||||||  |||||| || ||||||||||||||| || |||| |||||||    
T  21103108 attataggccgtttggtttttcatccctgaacttactaatcctttcattttaccactgtaattactaatccttcgaaagttcgtcc 21103193  T

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Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 19620857 - 19620777
Alignment:
Q  131 catttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaat 211  Q
    |||||||  ||||||| ||||  ||||||||||| |||||||||||||| || || ||||||||||||  ||| |||||||    
T  19620857 catttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaattttcatcctaat 19620777  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 16366966 - 16367065
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || |||||| ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  16366966 ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 16367065  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 9694132 - 9694006
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||||||| ||||||| || |||| ||  || || ||| || ||||||| ||||| || ||||  ||||||||||| |||||||| |  || || || ||    
T  9694132 aaaataggcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatatta 9694033  T
Q  189 atcatttgaaaattcgtcctaattaca 215  Q
    |||||||||||| | ||||||||||||    
T  9694032 atcatttgaaaaatggtcctaattaca 9694006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 10446835 - 10446932
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||    
T  10446835 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 28599486 - 28599547
Alignment:
Q  154 ttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||||||| ||||||||||  || || || |||||||||||||| | ||||||||||||    
T  28599486 ttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcctaattaca 28599547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 5608942 - 5608858
Alignment:
Q  131 catttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||| ||||| ||||| |  |||||||||||  |||||||||  || || || |||||||||||||| | ||||||||||||    
T  5608942 catttgaattttcctctctaaagttactaatcctttcattttgccattgcaaatattaatcatttgaaaaatggtcctaattaca 5608858  T

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Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 98 - 253
Target Start/End: Complemental strand, 17784482 - 17784327
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| ||| ||| || |||||||||||||||||||  |||  |||||||||||||||||||||||||| || || ||||||||| |    
T  17784482 ttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatttta 17784383  T
Q  198 aaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtggca 253  Q
    |||||||||||||||| ||||| || |||||||||| ||||||||| || ||||||    
T  17784382 aaattcgtcctaattaaaaaaaattactgaggtggatggtaattagatatgtggca 17784327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 4116802 - 4116911
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    |||||||||||    
T  4116802 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 4116901  T
Q  198 aaattcgtcc 207  Q
    ||||||||||    
T  4116902 aaattcgtcc 4116911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 4117644 - 4117535
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||||||||||| |||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    |||||||||||    
T  4117644 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 4117545  T
Q  198 aaattcgtcc 207  Q
    ||||||||||    
T  4117544 aaattcgtcc 4117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 33399969 - 33400078
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  33399969 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 33400068  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  33400069 aagttcgtcc 33400078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 1661528 - 1661418
Alignment:
Q  97 tttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttg 196  Q
    |||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  1661528 tttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttg 1661429  T
Q  197 aaaattcgtcc 207  Q
    ||| |||||||    
T  1661428 aaagttcgtcc 1661418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 14657306 - 14657197
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| || ||||||| |||| |||||||||| ||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  14657306 ttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatttga 14657207  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  14657206 aagttcgtcc 14657197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 33401232 - 33401116
Alignment:
Q  89 aaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattacta 188  Q
    |||||||| ||||||||| |||||||| ||| |||||| |||| |||||||||||||| ||||  |||||||||||||||||||||||||||||    ||    
T  33401232 aaaataggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagtta 33401133  T
Q  189 atcatttgaaaattcgt 205  Q
    |||||||||| ||||||    
T  33401132 atcatttgaatattcgt 33401116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 14656483 - 14656592
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||||| |||||||| ||| |||||| |||  |||||||||||||| ||||| ||||||||||||| |||||||||||||||    |||||||||||    
T  14656483 ttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttga 14656582  T
Q  198 aaattcgtcc 207  Q
    || |||||||    
T  14656583 aagttcgtcc 14656592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 5064331 - 5064491
Alignment:
Q  91 aataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaat 190  Q
    |||||| |||||||||| |||| || |||||| |||  | ||||||| ||||| || ||||  ||||||||||||||| |||||||||| || || ||||    
T  5064331 aataggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaat 5064430  T
Q  191 catttgaaaattcgtcctaattacaaaaatttgctgaggtggagggtaattagctacgtgg 251  Q
    |||||||   || |||||||||| |    ||||||||||||||  || |||||| ||||||    
T  5064431 catttgacttttggtcctaattagatttttttgctgaggtggactgtcattagcgacgtgg 5064491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 5064719 - 5064599
Alignment:
Q  95 ggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatt 194  Q
    ||||||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||| ||||||||||| ||| | |||||||| || || ||||||||    
T  5064719 ggtttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatt 5064620  T
Q  195 tgaaaattcgtcctaattaca 215  Q
    |||   || ||||||||||||    
T  5064619 tgacttttggtcctaattaca 5064599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 8427451 - 8427381
Alignment:
Q  109 tttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctg 179  Q
    ||||||| ||| |||||| || |||||||||||||||| |||   ||||||||||||||||||||||||||    
T  8427451 tttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctg 8427381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 8427203 - 8427316
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||||||  || || ||| || ||||||| ||||| ||||| |  |||||||||||||||||||||||||| || || |||||| ||||    
T  8427203 ttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcagttga 8427302  T
Q  198 aaattcgtcctaat 211  Q
    |  ||| |||||||    
T  8427303 attttcatcctaat 8427316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 13480206 - 13480328
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||| |||| || ||| || ||| |||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || ||||||    
T  13480206 taggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 13480305  T
Q  193 tttgaaaattcgtcctaattaca 215  Q
    |||||   || ||||||||||||    
T  13480306 tttgacttttggtcctaattaca 13480328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 23291747 - 23291864
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || ||  || ||| |||||||||| |||||||| ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  23291747 ttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 23291846  T
Q  198 aaattcgtcctaattaca 215  Q
       || ||||||||||||    
T  23291847 cttttggtcctaattaca 23291864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 13480603 - 13480490
Alignment:
Q  84 aatacaaaataggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaat 183  Q
    |||| |||||||| |||||||||| |||| ||  ||||| ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||||||  ||     
T  13480603 aataaaaaataggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaa 13480504  T
Q  184 tactaatcatttga 197  Q
    || |||||||||||    
T  13480503 tattaatcatttga 13480490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 260999 - 261139
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| || ||||||||||||||||  ||| ||||||||||||||||||||||||||| || || ||||||    
T  260999 taggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatca 261098  T
Q  193 tttgaaaattcgtcctaattacaaaaatttgctgaggtgga 233  Q
    ||||||  |||| |||||||| ||||||||||| |||||||    
T  261099 tttgaattttcgacctaattaaaaaaatttgcttaggtgga 261139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 262538 - 262441
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||||||  ||||||| |||||||||| || |||||||||||||||| ||||  ||||||||||||||||||| |||||| || || |||||||||    
T  262538 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcattt 262441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 13612 - 13709
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||||||  ||||||| ||| |||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||  | |||||||||    
T  13612 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcattt 13709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 14667 - 14593
Alignment:
Q  121 aattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcattt 195  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||  | |||||||||    
T  14667 aattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattt 14593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 591 - 695
Alignment:
Q  93 taggtttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatca 192  Q
    |||| |||||||||  ||||||| ||| |||||| || |||||||||||||||| ||||  |||||||||||| ||||||||||||| || || ||||||    
T  591 taggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatca 690  T
Q  193 tttga 197  Q
    |||||    
T  691 tttga 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 974 - 875
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    |||||||||| |||| || |||||| ||| |||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| || || |||||||||||    
T  974 ttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 8436 - 8553
Alignment:
Q  98 ttaaatatgtttttcatcgctgtaattatgggccatttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttga 197  Q
    ||||||| || |||| || || ||| ||| || ||||||| ||||| || ||||  ||||||||||| ||| | |||| ||| || || |||||||||||    
T  8436 ttaaataggtctttcgtctctttaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttga 8535  T
Q  198 aaattcgtcctaattaca 215  Q
    ||| | ||||||||||||    
T  8536 aaaatggtcctaattaca 8553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 10361 - 10445
Alignment:
Q  131 catttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||| ||||| || ||||  ||||||||||| ||| |||||||||| || || |||||||||||   || ||||||||||||    
T  10361 catttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaattaca 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 14271 - 14355
Alignment:
Q  131 catttgatttttcatctctgagtttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaattaca 215  Q
    ||||||| ||||| ||  |||| ||||||||||| ||| |||||| ||| || || |||| ||||||||| ||||||| ||||||    
T  14271 catttgaattttcgtccttgaggttactaatccttccaatttgccactgcaaatattaataatttgaaaaatcgtcctgattaca 14355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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