View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17777_high_9 (Length: 421)

Name: NF17777_high_9
Description: NF17777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17777_high_9
NF17777_high_9
[»] chr7 (42 HSPs)
chr7 (41-176)||(5968839-5968974)
chr7 (205-389)||(42515523-42515705)
chr7 (206-373)||(9124954-9125119)
chr7 (204-389)||(6747582-6747765)
chr7 (205-370)||(42515090-42515253)
chr7 (205-373)||(2941742-2941908)
chr7 (205-387)||(28495835-28496015)
chr7 (205-369)||(46425740-46425902)
chr7 (205-374)||(6719059-6719226)
chr7 (205-389)||(34405576-34405758)
chr7 (253-389)||(2611683-2611819)
chr7 (205-389)||(679796-679977)
chr7 (252-373)||(11517419-11517539)
chr7 (205-373)||(13125121-13125287)
chr7 (268-389)||(26957603-26957724)
chr7 (205-369)||(28495593-28495755)
chr7 (205-369)||(29039005-29039167)
chr7 (205-369)||(35474106-35474268)
chr7 (205-369)||(36422251-36422413)
chr7 (247-366)||(25182363-25182482)
chr7 (252-379)||(43233402-43233529)
chr7 (256-388)||(2193236-2193368)
chr7 (208-319)||(26421293-26421402)
chr7 (205-333)||(2465959-2466085)
chr7 (252-373)||(18833281-18833402)
chr7 (205-324)||(2465777-2465894)
chr7 (261-373)||(5406627-5406739)
chr7 (247-379)||(22529260-22529392)
chr7 (252-388)||(2189124-2189260)
chr7 (205-388)||(9623188-9623368)
chr7 (248-379)||(35527147-35527278)
chr7 (287-389)||(3305377-3305479)
chr7 (252-389)||(29357486-29357622)
chr7 (252-369)||(31406614-31406731)
chr7 (268-388)||(33316707-33316828)
chr7 (278-373)||(13124757-13124852)
chr7 (253-379)||(36015442-36015568)
chr7 (252-364)||(20966055-20966167)
chr7 (252-373)||(31743854-31743975)
chr7 (269-333)||(11372486-11372550)
chr7 (288-339)||(16811912-16811963)
chr7 (268-314)||(6585662-6585708)
[»] chr4 (57 HSPs)
chr4 (208-373)||(44471307-44471470)
chr4 (205-389)||(50398517-50398699)
chr4 (252-369)||(4127913-4128030)
chr4 (268-388)||(29628707-29628827)
chr4 (205-388)||(50398972-50399153)
chr4 (224-374)||(4127435-4127583)
chr4 (279-389)||(53854858-53854968)
chr4 (205-373)||(35871623-35871788)
chr4 (205-373)||(44470854-44471019)
chr4 (205-388)||(1645728-1645909)
chr4 (205-388)||(3169186-3169367)
chr4 (205-388)||(12691978-12692159)
chr4 (205-379)||(21220310-21220482)
chr4 (252-393)||(1464122-1464263)
chr4 (252-373)||(23350307-23350428)
chr4 (205-373)||(49998631-49998797)
chr4 (254-370)||(14572176-14572292)
chr4 (205-388)||(23942768-23942949)
chr4 (205-369)||(51331260-51331422)
chr4 (205-387)||(53996094-53996274)
chr4 (205-374)||(24628956-24629126)
chr4 (252-365)||(8467824-8467937)
chr4 (205-389)||(21067261-21067443)
chr4 (252-388)||(24629457-24629593)
chr4 (254-389)||(9423884-9424019)
chr4 (247-373)||(41869913-41870039)
chr4 (205-333)||(7678601-7678727)
chr4 (248-373)||(14571741-14571866)
chr4 (205-357)||(43928943-43929092)
chr4 (205-389)||(14351774-14351956)
chr4 (205-388)||(13613877-13614057)
chr4 (205-365)||(15306070-15306234)
chr4 (268-389)||(21067716-21067834)
chr4 (258-366)||(24271580-24271690)
chr4 (261-332)||(27026539-27026610)
chr4 (263-373)||(17028869-17028979)
chr4 (271-369)||(27578952-27579050)
chr4 (252-328)||(27029317-27029393)
chr4 (261-364)||(42838628-42838730)
chr4 (252-318)||(17628561-17628627)
chr4 (205-318)||(23943221-23943332)
chr4 (252-318)||(31817876-31817942)
chr4 (205-302)||(50814804-50814899)
chr4 (252-369)||(31817422-31817539)
chr4 (252-365)||(53391890-53392003)
chr4 (258-373)||(17029325-17029440)
chr4 (254-366)||(26200311-26200425)
chr4 (252-390)||(44830977-44831113)
chr4 (253-314)||(23976244-23976305)
chr4 (253-330)||(33764898-33764975)
chr4 (261-366)||(52048699-52048804)
chr4 (253-332)||(4185751-4185830)
chr4 (335-370)||(35477801-35477836)
chr4 (345-383)||(10165939-10165977)
chr4 (252-370)||(13266084-13266202)
chr4 (281-361)||(2499647-2499727)
chr4 (252-332)||(27578481-27578561)
[»] chr6 (41 HSPs)
chr6 (209-389)||(20896677-20896855)
chr6 (205-389)||(6330897-6331079)
chr6 (205-369)||(16519967-16520129)
chr6 (205-388)||(20126167-20126348)
chr6 (224-389)||(3652465-3652628)
chr6 (224-369)||(14771723-14771866)
chr6 (202-373)||(13492784-13492953)
chr6 (205-373)||(7912305-7912471)
chr6 (252-389)||(23986347-23986484)
chr6 (210-379)||(2681206-2681373)
chr6 (205-373)||(17027516-17027682)
chr6 (205-370)||(17731094-17731261)
chr6 (252-389)||(23776420-23776557)
chr6 (205-368)||(9352062-9352223)
chr6 (224-373)||(7911873-7912020)
chr6 (205-388)||(20850301-20850482)
chr6 (252-373)||(13191543-13191664)
chr6 (205-393)||(17851349-17851535)
chr6 (261-369)||(31821731-31821839)
chr6 (205-379)||(11062275-11062446)
chr6 (224-388)||(15929562-15929724)
chr6 (253-374)||(21311965-21312086)
chr6 (279-373)||(9440485-9440579)
chr6 (252-369)||(9440339-9440456)
chr6 (268-388)||(2720610-2720730)
chr6 (252-367)||(20735696-20735811)
chr6 (252-379)||(27334150-27334277)
chr6 (252-379)||(27394890-27395017)
chr6 (252-348)||(15929219-15929315)
chr6 (253-369)||(21311514-21311630)
chr6 (205-303)||(13492397-13492493)
chr6 (205-369)||(2890824-2890985)
chr6 (205-389)||(17850897-17851079)
chr6 (252-332)||(20732614-20732694)
chr6 (247-366)||(32292887-32293006)
chr6 (261-366)||(28065877-28065982)
chr6 (248-323)||(9440883-9440958)
chr6 (253-332)||(10964340-10964419)
chr6 (299-389)||(3652958-3653048)
chr6 (261-319)||(28583012-28583070)
chr6 (252-332)||(1991589-1991669)
[»] chr1 (37 HSPs)
chr1 (205-391)||(30872935-30873119)
chr1 (252-389)||(43057553-43057690)
chr1 (205-369)||(16451918-16452080)
chr1 (205-369)||(16461071-16461233)
chr1 (252-369)||(50002737-50002854)
chr1 (205-388)||(20054521-20054702)
chr1 (205-388)||(20054977-20055158)
chr1 (205-388)||(20055433-20055614)
chr1 (205-388)||(20055889-20056070)
chr1 (205-388)||(20056345-20056526)
chr1 (205-388)||(20057248-20057429)
chr1 (205-388)||(20845646-20845827)
chr1 (206-388)||(20054066-20054246)
chr1 (205-370)||(35759593-35759756)
chr1 (253-370)||(35760945-35761062)
chr1 (202-409)||(43057047-43057252)
chr1 (205-389)||(52250185-52250367)
chr1 (224-379)||(50002289-50002442)
chr1 (205-379)||(20057704-20057876)
chr1 (252-368)||(31822693-31822809)
chr1 (224-373)||(20061195-20061342)
chr1 (253-373)||(2328310-2328430)
chr1 (253-373)||(7548086-7548206)
chr1 (205-388)||(38340886-38341067)
chr1 (253-390)||(12883502-12883639)
chr1 (205-370)||(46693720-46693884)
chr1 (248-374)||(50003101-50003227)
chr1 (205-358)||(51372859-51373010)
chr1 (205-316)||(20056801-20056910)
chr1 (271-389)||(10820571-10820689)
chr1 (224-369)||(2634923-2635066)
chr1 (268-370)||(23180728-23180830)
chr1 (249-332)||(16907270-16907353)
chr1 (252-333)||(12728026-12728108)
chr1 (205-313)||(20060325-20060431)
chr1 (253-318)||(16440610-16440675)
chr1 (253-336)||(2739554-2739637)
[»] chr8 (40 HSPs)
chr8 (253-389)||(2044037-2044173)
chr8 (205-363)||(17103086-17103242)
chr8 (253-379)||(8080373-8080499)
chr8 (209-373)||(34308468-34308630)
chr8 (253-373)||(22840560-22840680)
chr8 (205-373)||(25147531-25147697)
chr8 (205-369)||(27022323-27022485)
chr8 (209-373)||(34308924-34309090)
chr8 (206-388)||(10844863-10845043)
chr8 (205-379)||(12827239-12827411)
chr8 (271-382)||(29971450-29971561)
chr8 (252-389)||(41659135-41659272)
chr8 (205-388)||(22026359-22026540)
chr8 (205-388)||(22548980-22549161)
chr8 (205-388)||(27925879-27926060)
chr8 (205-369)||(6464895-6465057)
chr8 (205-373)||(25147962-25148128)
chr8 (254-389)||(28453318-28453452)
chr8 (205-374)||(33852243-33852410)
chr8 (252-373)||(12100687-12100807)
chr8 (252-389)||(28375084-28375221)
chr8 (205-368)||(22548534-22548695)
chr8 (252-389)||(27021909-27022050)
chr8 (261-359)||(22705181-22705279)
chr8 (251-369)||(27819275-27819393)
chr8 (205-365)||(10844600-10844758)
chr8 (205-373)||(25144767-25144933)
chr8 (248-370)||(21316135-21316257)
chr8 (253-379)||(32292386-32292512)
chr8 (253-333)||(3744673-3744753)
chr8 (252-369)||(30334938-30335055)
chr8 (252-332)||(1297043-1297123)
chr8 (253-373)||(15567587-15567707)
chr8 (268-368)||(17429501-17429600)
chr8 (253-324)||(3745145-3745216)
chr8 (261-356)||(15568044-15568139)
chr8 (305-392)||(25307741-25307828)
chr8 (260-330)||(36968433-36968503)
chr8 (253-332)||(41913006-41913085)
chr8 (252-328)||(15819045-15819121)
[»] chr5 (39 HSPs)
chr5 (205-387)||(10927388-10927568)
chr5 (205-373)||(3887042-3887208)
chr5 (205-390)||(42788631-42788814)
chr5 (205-373)||(2474400-2474566)
chr5 (205-389)||(10926931-10927113)
chr5 (205-388)||(39146919-39147100)
chr5 (205-387)||(17445440-17445620)
chr5 (205-373)||(189063-189229)
chr5 (205-373)||(2473954-2474120)
chr5 (189-370)||(8642003-8642182)
chr5 (205-389)||(2193795-2193977)
chr5 (253-389)||(20039505-20039641)
chr5 (252-383)||(42429131-42429261)
chr5 (205-369)||(8391307-8391468)
chr5 (205-382)||(15512997-15513173)
chr5 (252-373)||(22556531-22556652)
chr5 (253-389)||(27646866-27647002)
chr5 (252-388)||(34867770-34867906)
chr5 (205-370)||(1821904-1822067)
chr5 (252-373)||(22556964-22557085)
chr5 (254-389)||(11160713-11160848)
chr5 (256-369)||(2058690-2058803)
chr5 (207-370)||(3886588-3886749)
chr5 (253-373)||(4658024-4658143)
chr5 (205-388)||(34371592-34371773)
chr5 (205-388)||(34372048-34372229)
chr5 (252-379)||(21886176-21886303)
chr5 (253-386)||(5066922-5067055)
chr5 (252-389)||(18304410-18304547)
chr5 (268-366)||(16370754-16370852)
chr5 (205-354)||(18750181-18750328)
chr5 (288-373)||(22975076-22975161)
chr5 (254-330)||(24182277-24182353)
chr5 (299-358)||(29680177-29680236)
chr5 (253-373)||(5549339-5549460)
chr5 (252-369)||(30719835-30719952)
chr5 (224-323)||(4673475-4673572)
chr5 (204-285)||(11757265-11757344)
chr5 (261-330)||(39801501-39801571)
[»] scaffold0168 (1 HSPs)
scaffold0168 (205-389)||(2721-2903)
[»] scaffold0047 (2 HSPs)
scaffold0047 (205-389)||(18120-18301)
scaffold0047 (269-389)||(17645-17765)
[»] chr3 (40 HSPs)
chr3 (205-372)||(41472297-41472461)
chr3 (205-389)||(20885102-20885283)
chr3 (205-389)||(39640916-39641098)
chr3 (205-388)||(28561726-28561907)
chr3 (253-389)||(30529666-30529802)
chr3 (205-373)||(31284261-31284427)
chr3 (205-390)||(13150084-13150267)
chr3 (205-389)||(25230690-25230872)
chr3 (205-389)||(25238277-25238459)
chr3 (205-369)||(16811380-16811542)
chr3 (205-389)||(50347725-50347907)
chr3 (252-368)||(7493881-7493997)
chr3 (205-360)||(11180019-11180172)
chr3 (252-388)||(39653144-39653280)
chr3 (205-379)||(14813938-14814110)
chr3 (253-389)||(25230279-25230415)
chr3 (253-389)||(25237866-25238002)
chr3 (205-332)||(32386719-32386844)
chr3 (253-369)||(32796966-32797082)
chr3 (205-387)||(32227206-32227386)
chr3 (205-389)||(32227480-32227661)
chr3 (205-389)||(37045014-37045196)
chr3 (252-368)||(7477191-7477307)
chr3 (253-369)||(25239108-25239224)
chr3 (205-379)||(2911084-2911256)
chr3 (253-372)||(41473993-41474112)
chr3 (205-325)||(13150539-13150657)
chr3 (253-373)||(25248106-25248226)
chr3 (205-370)||(8067278-8067441)
chr3 (205-328)||(25238669-25238790)
chr3 (205-370)||(27187315-27187478)
chr3 (252-366)||(29224326-29224440)
chr3 (252-369)||(16810924-16811041)
chr3 (205-316)||(4067345-4067454)
chr3 (194-388)||(14820134-14820326)
chr3 (252-409)||(25803034-25803192)
chr3 (228-332)||(31103966-31104070)
chr3 (252-359)||(25802578-25802685)
chr3 (309-373)||(12820639-12820703)
chr3 (261-318)||(47518358-47518415)
[»] scaffold0020 (1 HSPs)
scaffold0020 (205-373)||(107448-107614)
[»] chr2 (36 HSPs)
chr2 (205-389)||(11388168-11388348)
chr2 (205-373)||(30966229-30966395)
chr2 (253-389)||(33174937-33175073)
chr2 (252-389)||(33174484-33174619)
chr2 (205-369)||(29804681-29804843)
chr2 (253-389)||(1707021-1707156)
chr2 (253-389)||(18098909-18099045)
chr2 (205-388)||(41754269-41754450)
chr2 (253-383)||(1912510-1912640)
chr2 (205-373)||(30966685-30966851)
chr2 (253-369)||(1953154-1953270)
chr2 (205-360)||(8256534-8256687)
chr2 (261-389)||(18447957-18448085)
chr2 (205-373)||(24818321-24818487)
chr2 (202-389)||(38898894-38899079)
chr2 (252-388)||(25338027-25338163)
chr2 (252-372)||(29259650-29259770)
chr2 (253-376)||(16379385-16379508)
chr2 (205-367)||(16378938-16379098)
chr2 (261-376)||(25434095-25434210)
chr2 (252-370)||(5399847-5399965)
chr2 (205-348)||(11394555-11394694)
chr2 (205-379)||(15619887-15620059)
chr2 (202-369)||(30961865-30962038)
chr2 (268-357)||(8181397-8181486)
chr2 (254-359)||(30963752-30963857)
chr2 (254-332)||(8073928-8074006)
chr2 (268-369)||(16541984-16542085)
chr2 (253-369)||(27882957-27883073)
chr2 (252-316)||(33771053-33771117)
chr2 (253-332)||(13191010-13191089)
chr2 (268-373)||(83012-83117)
chr2 (261-366)||(30963302-30963407)
chr2 (307-358)||(9909102-9909153)
chr2 (253-296)||(15639806-15639849)
chr2 (263-318)||(20502073-20502128)
[»] scaffold0022 (2 HSPs)
scaffold0022 (205-373)||(162663-162829)
scaffold0022 (251-332)||(69844-69925)
[»] scaffold0040 (1 HSPs)
scaffold0040 (205-373)||(2195-2361)
[»] scaffold0024 (1 HSPs)
scaffold0024 (205-373)||(105715-105881)
[»] scaffold0002 (1 HSPs)
scaffold0002 (205-390)||(154735-154918)
[»] scaffold0005 (2 HSPs)
scaffold0005 (254-370)||(245084-245200)
scaffold0005 (248-373)||(245510-245635)
[»] scaffold0499 (1 HSPs)
scaffold0499 (205-374)||(2036-2203)
[»] scaffold0322 (2 HSPs)
scaffold0322 (205-373)||(18961-19127)
scaffold0322 (305-372)||(18204-18271)
[»] scaffold0018 (1 HSPs)
scaffold0018 (205-373)||(10295-10461)
[»] scaffold0243 (1 HSPs)
scaffold0243 (205-388)||(1200-1381)
[»] scaffold0007 (1 HSPs)
scaffold0007 (253-373)||(142305-142425)
[»] scaffold0333 (2 HSPs)
scaffold0333 (224-388)||(4541-4703)
scaffold0333 (252-388)||(4996-5137)
[»] scaffold0088 (1 HSPs)
scaffold0088 (256-379)||(23662-23785)
[»] scaffold0664 (1 HSPs)
scaffold0664 (253-370)||(4013-4130)
[»] scaffold0101 (1 HSPs)
scaffold0101 (268-368)||(45387-45486)
[»] scaffold0557 (2 HSPs)
scaffold0557 (253-323)||(2150-2220)
scaffold0557 (320-389)||(729-798)
[»] scaffold0391 (1 HSPs)
scaffold0391 (244-315)||(14794-14865)
[»] scaffold1138 (1 HSPs)
scaffold1138 (299-337)||(774-812)
[»] scaffold0389 (1 HSPs)
scaffold0389 (205-282)||(13518-13593)


Alignment Details
Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 5968839 - 5968974
Alignment:
Q  41 aaaaatataccttacatttccccatctcaaaatgttgtggatttacttaattataaacaaaattttaaaaatgtttgagacccaaatttaaatattttaa 140  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5968839 aaaaatataccttagatttccccatctcaaaatgttgaggatttacttaattataaacaaaattttaaaaatgtttgtgaccctaatttaaatattttaa 5968938  T
Q  141 gattactgtttttgatgtcttcacaactacatcata 176  Q
     |||| ||||||| ||||||||||||||||| ||||    
T  5968939 cattaatgttttttatgtcttcacaactacaacata 5968974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 42515705 - 42515523
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| |||||| |||| |||||     
T  42515705 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacacttcttataagc 42515608  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||| |||||||||| ||||||||| ||| |||||    
T  42515607 cttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattctgatgtgattcggttcgtctagaagctgtcg 42515523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 206 - 373
Target Start/End: Complemental strand, 9125119 - 9124954
Alignment:
Q  206 agtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtc 305  Q
    ||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||      
T  9125119 agtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagct 9125022  T
Q  306 ttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |||||| ||||||| ||||||||||||  ||||| ||| |||||||||||||||||||||||||||||    
T  9125021 ttcctttaaccatacagtctcatacctgcacggcctcaagatctctctcattccgatgtgattcagtt 9124954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 204 - 389
Target Start/End: Original strand, 6747582 - 6747765
Alignment:
Q  204 taagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataag 303  Q
    ||||||||||||| ||||  |||||||| |||| ||||| |   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| ||||     
T  6747582 taagtcaagcacgcttaactgtggagtttttatggaataggc--taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataat 6747679  T
Q  304 tcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
     |||||||||||||| |||| ||||||||| ||||| |||||||| |||||||||| ||||||||||| | ||||| |||||||||    
T  6747680 ccttccttcaaccatgtagtatcatacctacacggcctcaggatccctctcattccaatgtgattcagcttgtctagaagttgtcg 6747765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 205 - 370
Target Start/End: Complemental strand, 42515253 - 42515090
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  42515253 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagt 42515156  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    |||||||||| |||  ||||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  42515155 cttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattccgatgtgattca 42515090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 2941742 - 2941908
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| || ||     
T  2941742 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttatcagc 2941839  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||| ||||||||||||||    
T  2941840 cttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctcattctgatgtgattcagtt 2941908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 205 - 387
Target Start/End: Complemental strand, 28496015 - 28495835
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | |||| |||| |||||     
T  28496015 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacagttcttataagc 28495918  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgt 387  Q
    |||||||||||||| ||||| |||||||| ||||| ||| |||| ||||||||||||||||||||  ||| |||| |||||||    
T  28495917 cttccttcaaccatgtagtcccatacctacacggcctcaagatccctctcattccgatgtgattcgattcctctagaagttgt 28495835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 369
Target Start/End: Complemental strand, 46425902 - 46425740
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||||||  ||| |||||||| |||||| ||||||||||||||| || ||||||||||| |||||     
T  46425902 aagtcaagcacgcttaactgtggagttcttatggaataaga--taccgaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagc 46425805  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||  ||||||||| ||||| |||||||| | ||  |||||||| ||||||||||||||||||||    
T  46425804 cttatttcaaccatgtagtcccatacctacatggtctcaggatccctctcattccgatgtgattc 46425740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 6719059 - 6719226
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   |||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  6719059 aagtcaagcacgcttaactctggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 6719156  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttc 374  Q
     ||||||||||||| ||||| |||||||| || || |||||||| |||||||||| ||||||||| ||||    
T  6719157 attccttcaaccatgtagtcccatacctacacagcctcaggatccctctcattccaatgtgattcggttc 6719226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 34405576 - 34405758
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| ||||||  ||||||||||||||||| | ||||||||| |||||     
T  34405576 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcctgttgatataggtagtacccaacaattcttataagc 34405673  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| ||||| |||||||| | ||| | |||||| ||||||||||| |||||||| |||| |||| ||| |||||    
T  34405674 cttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggtgtgattcggttcctctagaagctgtcg 34405758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 2611683 - 2611819
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| | | | |||||| | |||    
T  2611683 aaaagaagatgcatcttgttgttatagatagtaccaaacaattcttataagccttccttccaccatatagtctcatacctacatgacctcaggacccctc 2611782  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||||||||||| |||| ||| |||||    
T  2611783 tcattccgatgtgattcagttcctctagaagctgtcg 2611819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 679977 - 679796
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  |||||||||||||| |||||||||||||||||| ||| ||||||| |||||     
T  679977 aagtcaagcacgcttaactgtggagttcttatggaatgggc--taccaaaaagaatatgcatcttgttgatataggtagtaccaa-caattcttataagc 679881  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||| |||| || || |||||||| ||| | |||||||| ||||||||| ||||||||||||||| |||| ||| |||||    
T  679880 cttccttcagccatgtactcccatacctacacgacctcaggatccctctcattctgatgtgattcagttcctctagaagctgtcg 679796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 11517419 - 11517539
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||| | |||||| |||||||||||||||||| ||||||||||| ||||| |||||||| |||||  |||| ||||||| |||||| |||||||| ||    
T  11517419 gaaaagtagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttc-accatgcagtcccatacctgtacggcctcaggatccct 11517517  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||||||||    
T  11517518 ctcattccgatgtgattcagtt 11517539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 13125121 - 13125287
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||| |||||||||||| ||||||||||| |||||     
T  13125121 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagc 13125218  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| |||||||  | ||| ||| |||| ||||||||||||| ||||||||||    
T  13125219 cttccttcaaccatgcagtcccatacctgcagggcctcaagatccctctcattccgatatgattcagtt 13125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 26957603 - 26957724
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||||||||||||||| ||||||||||| ||||| |||| ||||||||| ||||  |||||||| || || ||| |||| ||||||||||||||||||    
T  26957603 ttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatgtgat 26957702  T
Q  368 tcagttcgtctaaaagttgtcg 389  Q
    || |||| |||| |||||||||    
T  26957703 tcggttcctctagaagttgtcg 26957724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 28495593 - 28495755
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||  ||||||| |||||| |||||||||||||||  |   ||||||||| ||||||    
T  28495593 aagtcaagcacgcttaactgtggagttcttatggaatgagc--tacctaaaagaagatgcatcttgttgatataggtaaaactcaacaattcttataagt 28495690  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||||||||| ||||| |||||||| ||| | |||||||| |||||||||||||| |||||    
T  28495691 cttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattccgatgggattc 28495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 29039005 - 29039167
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  || |||||||||| ||||  | ||||   ||||||| ||||||||||||||||||||||||| |||||||||||  ||||     
T  29039005 aagtcaagcacgcttaaatgtagagttcttatggaat--ggattatcaaaaagaagatgcatgttgttgatataggtagtaccaaacaattcttgtaagc 29039102  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    || | ||||||||| ||||| |||| ||| ||||| |||||||  ||||||||||||||||||||    
T  29039103 ctccattcaaccatgtagtcacatatctacacggcctcaggatgcctctcattccgatgtgattc 29039167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 35474106 - 35474268
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||| |||| ||   |||  ||||||| |||||| ||||||||||| ||||||  |||||||||| ||||||    
T  35474106 aagtcaaacacgcttaactgtggagttcttatggaatgagc--taccaaaaagaagatgcatcttgttgatataagtagtactaaacaattcttataagt 35474203  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    ||| |||||||||| |||||||||||||| ||| | | |||||| ||||||||||| ||||||||    
T  35474204 ctttcttcaaccatgtagtctcatacctacacgacctaaggatccctctcattccggtgtgattc 35474268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 369
Target Start/End: Complemental strand, 36422413 - 36422251
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  36422413 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 36422316  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||||||||| ||||| |||||||| | ||| | |||||| |||||||||||  |||||||    
T  36422315 cttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgattc 36422251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 25182482 - 25182363
Alignment:
Q  247 ttactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcagga 346  Q
    |||| ||||| || ||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||| |  || |  ||||||    
T  25182482 ttaccgaaaataagatgtatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacttgcacagtctcagga 25182383  T
Q  347 tctctctcattccgatgtga 366  Q
    ||||||||||||||||||||    
T  25182382 tctctctcattccgatgtga 25182363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 379
Target Start/End: Complemental strand, 43233529 - 43233402
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||| || |||||| |||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| |||| |||||||| ||||| ||| |||| ||    
T  43233529 gaaaaaaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcctttaaccatacagtcacatacctacacggcctcatgatccct 43233430  T
Q  352 ctcattccgatgtgattcagttcgtcta 379  Q
    |||||| || |||||||| |||| ||||    
T  43233429 ctcatttcggtgtgattcggttcctcta 43233402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 388
Target Start/End: Complemental strand, 2193368 - 2193236
Alignment:
Q  256 agaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctca 355  Q
    |||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||  |||||| | ||||||    
T  2193368 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggtctcaggaaccctctca 2193269  T
Q  356 ttccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||| |||||||| |||| |||| ||| ||||    
T  2193268 ttccggtgtgattcggttcctctagaagctgtc 2193236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 26421293 - 26421402
Alignment:
Q  208 tcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtctt 307  Q
    |||| |||||||||  ||||||||||||| ||||  | | ||| ||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  26421293 tcaaacacgtttaactgtggagttcttatggaat--ggactaccgaaaaaaatatgcatcttgttgatataggtagtatcaagcaattcttataagtctt 26421390  T
Q  308 ccttcaaccata 319  Q
    ||||||||||||    
T  26421391 ccttcaaccata 26421402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 2466085 - 2465959
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||  |||||||||||||||||| ||||||| ||| |||||     
T  2466085 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcaacttgttgatataggtagtaccaaacaactcttataagc 2465988  T
Q  305 cttccttcaaccatatagtctcataccta 333  Q
    |||||||||||||| ||||| ||||||||    
T  2465987 cttccttcaaccatgtagtcccataccta 2465959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 252 - 373
Target Start/End: Complemental strand, 18833402 - 18833281
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||||||||||  |||||||||  |||||  |||| ||||||||  |||  ||||||| |||||| |||||| | ||    
T  18833402 gaaaagaagatgcatcttgttgatataggtagtactaaacaattcatataagctttccctcaaccatgcagttccatacctgtacggcctcaggaaccct 18833303  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||||||||    
T  18833302 ctcattccgatgtgattcagtt 18833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 2465894 - 2465777
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||| ||| |||||     
T  2465894 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaactcttataagc 2465797  T
Q  305 cttccttcaaccatatagtc 324  Q
    |||||||||||||| |||||    
T  2465796 cttccttcaaccatgtagtc 2465777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 373
Target Start/End: Original strand, 5406627 - 5406739
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| ||||||||||||||| || ||||||||||| |||| |||||||||||||||  |||| ||||||   ||| ||| |||||| || ||||||||    
T  5406627 atgcatcttgttgatataggtaataccaaacaattcttataaatcttccttcaaccatgcagtcccataccggcacgactttaggatccctatcattccg 5406726  T
Q  361 atgtgattcagtt 373  Q
    |||||||||||||    
T  5406727 atgtgattcagtt 5406739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 379
Target Start/End: Original strand, 22529260 - 22529392
Alignment:
Q  247 ttactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcagga 346  Q
    ||||||||||||| |||||| ||||| |||||| ||||| |||||| |||| ||||| |||||||||||||| ||| | ||||| || | | | ||||||    
T  22529260 ttactgaaaagaagatgcatcttgtttatatagatagtaccaaacatttcttataagccttccttcaaccatgtaggcccatacttacatgacctcagga 22529359  T
Q  347 tctctctcattccgatgtgattcagttcgtcta 379  Q
    || ||||||||| ||| |||||| |||||||||    
T  22529360 tccctctcattcggatatgattcggttcgtcta 22529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 388
Target Start/End: Complemental strand, 2189260 - 2189124
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||  ||||||||||| ||||| |||| |||||||||  |||| || ||||  || || |||||| | ||    
T  2189260 gaaaagaagatgcatcttgttgatataggtagtgccaaacaattcttataagccttctttcaaccatgcagtcccacacctgcacagcctcaggaaccct 2189161  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||| |||||||| |||| |||| ||| ||||    
T  2189160 ctcattccggtgtgattcggttcctctagaagctgtc 2189124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 9623368 - 9623188
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||||||||  ||| ||| |||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||    
T  9623368 aagtcaaacacgcttaactgtggagttcttatagaat--gaactaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagt 9623272  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
      |||||| |||||  |||||||| | |  ||  | || ||||| ||||||||||  |||||||| |||  |||||||||||||    
T  9623271 actccttctaccatggagtctcatgcatgcacaacctctggatccctctcattccattgtgattcggtttatctaaaagttgtc 9623188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 379
Target Start/End: Original strand, 35527147 - 35527278
Alignment:
Q  248 tactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggat 347  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||| |||| ||||||||   |||| ||||  |  ||| | || ||||    
T  35527147 tactgaaaagaatatgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaaccaaccagtcccatatttgcacgacctcgggat 35527246  T
Q  348 ctctctcattccgatgtgattcagttcgtcta 379  Q
    | |||||||| || |||||||| |||||||||    
T  35527247 ccctctcatttcggtgtgattcggttcgtcta 35527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 3305377 - 3305479
Alignment:
Q  287 caaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttg 386  Q
    ||||||||||||||||| |||| ||||||||| ||||| ||||| || ||||| |||||||| | |||||| ||||||||||| |||| |||| ||| ||    
T  3305377 caaacaattctcataagccttcattcaaccatgtagtcccatacttacacggcctcaggatccccctcatttcgatgtgattcggttcctctagaagctg 3305476  T
Q  387 tcg 389  Q
    |||    
T  3305477 tcg 3305479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 29357486 - 29357622
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||| ||||| ||||||||||| ||||   |||||||||||||  |||| |||||||  ||| | || ||||  ||    
T  29357486 gaaaagaagatgcatcttgttgatatagttagtaccaaacaattcttataaacattccttcaaccatgcagtcccatacctgcacgacctcgggatacct 29357585  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||| || ||||||||||||| |||| |||||||||    
T  29357586 ctcatt-cggtgtgattcagttcatctagaagttgtcg 29357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 31406614 - 31406731
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||  | ||||||||||| ||||||| || |||||||||  |||| || | ||  |||||||||||||| ||    
T  31406614 gaaaagaagatgcatcttgttgatataggtaacaccaaacaattctaataagtcatctttcaaccattcagtcccagatctgcacggcttcaggatccct 31406713  T
Q  352 ctcattccgatgtgattc 369  Q
    ||||||  ||||||||||    
T  31406714 ctcattttgatgtgattc 31406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 33316828 - 33316707
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgt-ga 366  Q
    ||||||||||| ||| | |||||||||||| |||| | ||||||||||||| |||||||||||||  ||| | |||  || | |||||||||||||| ||    
T  33316828 ttgttgatataagtattgtcaaacaattcttataatttttccttcaaccatgtagtctcatacctgcacgacatcaaaatttatctcattccgatgtgga 33316729  T
Q  367 ttcagttcgtctaaaagttgtc 388  Q
    ||||||| ||||| ||| ||||    
T  33316728 ttcagtttgtctagaagctgtc 33316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 13124757 - 13124852
Alignment:
Q  278 aggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |||||||| || |||||||| ||||| ||||||||||||||  |||| |||||||  ||||| ||| |||| |||||||||| || ||||||||||    
T  13124757 aggtagtaccacacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattccaatatgattcagtt 13124852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 379
Target Start/End: Original strand, 36015442 - 36015568
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| | |||| ||||||||||| |||||| |||||||||||  ||||  |||||||||||||  |||||||||| |  || || |  ||||| |||    
T  36015442 aaaagaagaggcatcttgttgatatatgtagtaccaaacaattcttttaagctttccttcaaccatggagtctcatacttgcactgccttgggatccctc 36015541  T
Q  353 tcattccgatgtgattcagttcgtcta 379  Q
    |||||||| |||||||  |||||||||    
T  36015542 tcattccggtgtgatttggttcgtcta 36015568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 364
Target Start/End: Complemental strand, 20966167 - 20966055
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||| ||||| ||| |||||| |||||||| ||  ||| |||||| ||||||| |||||||| |||  ||||||||||||| | ||| ||| || | ||    
T  20966167 gaaaataatatacatcttgttggtataggtattacaaaataattcttataagtcatccttcaatcatgcagtctcatacctagatggcctcaagaccact 20966068  T
Q  352 ctcattccgatgt 364  Q
    |||||||||||||    
T  20966067 ctcattccgatgt 20966055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 31743854 - 31743975
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||| ||| | ||||| ||||| |||||  |||||||||||||  |||||||| | |  |||  |||| ||||  |    
T  31743854 gaaaagaagatgcatcttgttgatatagatagcaccaaaccattcttataagcattccttcaaccatgcagtctcatgcttgcacgatttcaagatccat 31743953  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    |||||| |||| ||||||||||    
T  31743954 ctcatttcgatatgattcagtt 31743975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 11372550 - 11372486
Alignment:
Q  269 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcataccta 333  Q
    ||||| || |||||||| ||||||||||| ||||| ||||||||||||||| | | |||||||||    
T  11372550 tgttggtacaggtagtaccaaacaattcttataagccttccttcaaccatacaatttcataccta 11372486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 16811912 - 16811963
Alignment:
Q  288 aaacaattctcataagtcttccttcaaccatatagtctcatacctatacggc 339  Q
    |||||||||| |||||  ||||||||||||| |||||||||||||| |||||    
T  16811912 aaacaattcttataagcattccttcaaccatgtagtctcatacctacacggc 16811963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 6585708 - 6585662
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaa 314  Q
    |||||||||||||||||| ||||||||| | |||||||||| |||||    
T  6585708 ttgttgatataggtagtaccaaacaatttttataagtcttctttcaa 6585662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 208 - 373
Target Start/End: Original strand, 44471307 - 44471470
Alignment:
Q  208 tcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtctt 307  Q
    ||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||    
T  44471307 tcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtctt 44471404  T
Q  308 ccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  44471405 ccttcaaccatgtagtctcatacctgtacggcctcaagatctctctcattccgatgtgattcagtt 44471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 50398517 - 50398699
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   |||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  50398517 aagtcaagcacgcttaactatggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 50398614  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| | | ||||| |||||||||    
T  50398615 cttccttcaaccatgtagtcctatacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcg 50398699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 4127913 - 4128030
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||| | ||| |||||||| ||    
T  4127913 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatatagtctcatgcctacatggcctcaggatccct 4128012  T
Q  352 ctcattccgatgtgattc 369  Q
    ||||||||||||||||||    
T  4128013 ctcattccgatgtgattc 4128030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 29628707 - 29628827
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||| |||||||||    
T  29628707 ttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatttcgatgtgat 29628806  T
Q  368 tcagttcgtctaaaagttgtc 388  Q
    || |||| |||| ||| ||||    
T  29628807 tcggttcctctagaagctgtc 29628827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 50398972 - 50399153
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||| |||| ||   ||| |||||||| ||||||  ||||||||||||||||| ||||||||||| |||||     
T  50398972 aagtcaaacacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcgtgttgatataggtagtaccaaacaattcttataagc 50399069  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||||||||||||| || ||||||||||| ||||  |||||||| |||||||||||||||||||| | | ||||| ||||||||    
T  50399070 cttccttcaaccatgtaatctcatacctacacggtctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtc 50399153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 224 - 374
Target Start/End: Original strand, 4127435 - 4127583
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||    
T  4127435 gtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaactatgtagt 4127532  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagttc 374  Q
    | |||||||| | ||| |||||||| |||||||||||||||||||| ||||    
T  4127533 cccatacctacatggcctcaggatccctctcattccgatgtgattcggttc 4127583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 279 - 389
Target Start/End: Original strand, 53854858 - 53854968
Alignment:
Q  279 ggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtct 378  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||||| ||||||||    
T  53854858 ggtagtaccaaacaattcttataagtcttccttcaaccatatagtctcatacctacactgcttcatgatccctctcattccgatgtgattcggttcgtct 53854957  T
Q  379 aaaagttgtcg 389  Q
    | ||| |||||    
T  53854958 ataagctgtcg 53854968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 35871788 - 35871623
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||| ||| ||||||||||  |||||     
T  35871788 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaa-atgcatcttgttgatataggtggtaccaaacaattcatataagc 35871692  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  35871691 cttccttcaaccatgaagtcccatacctgtacggcctcaggatccctctcattccgatgtgattcagtt 35871623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 44470854 - 44471019
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||  |||| ||| |||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  44470854 aagtcaagcacgcttaactgtggagttcttatggaatgag--ttac-gaacagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 44470950  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |||| |||||||||| |||| ||||| | ||| || ||| |||||||||||||||||||||||||||||    
T  44470951 cttctttcaaccatacagtcacatacttgtacagcgtcatgatctctctcattccgatgtgattcagtt 44471019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 1645728 - 1645909
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| ||||||||||||||| || ||||||||||| ||||||    
T  1645728 aagtcaagcacgcttaactgtggagttcttatggaatgggc--taccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagt 1645825  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||||||||||||| ||||| |||||||| ||||| ||| |||  |||||||||||||||||||| |||| |||| ||| ||||    
T  1645826 cttccttcaaccatgtagtcccatacctacacggcctcaagattcctctcattccgatgtgattcggttcctctagaagctgtc 1645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 3169367 - 3169186
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| || |  |  ||||  ||||||| |||||| |||||||||||||||||| ||||||||| | ||||||    
T  3169367 aagtcaagcacgcttaagtgtggagttcttatggattggg--ttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagt 3169270  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||||||||||||| ||||| |||||||| ||||| ||| |||  |||||||||||||||||||| |||| |||| ||| ||||    
T  3169269 cttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattcggttcctctataagctgtc 3169186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 12691978 - 12692159
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  12691978 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 12692075  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  12692076 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 12692159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 379
Target Start/End: Original strand, 21220310 - 21220482
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||| |||||||||||||| ||  ||||  ||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  21220310 aagtcaaacacgcttaactgtgtagttcttatagaatgag--ttaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 21220407  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
     |||||||||||||||||| ||||||||| | ||| ||| |||| ||||||||| |||||||||| |||| ||||    
T  21220408 attccttcaaccatatagtttcatacctacatggcctcatgatccctctcattctgatgtgattcggttcctcta 21220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 393
Target Start/End: Complemental strand, 1464263 - 1464122
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||||| ||| |||||| || || ||||||||||| ||||   || |||| ||    
T  1464263 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttctttcaactatgtattctcatacctacacggtcgcatgatccct 1464164  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcgaaag 393  Q
    ||||||| |||||||||| ||||||||||||| |||||||||    
T  1464163 ctcattctgatgtgattcggttcgtctaaaaggtgtcgaaag 1464122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 23350307 - 23350428
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||  |||| | ||||| |||||| ||| |||||||    
T  23350307 gaaaagaagatgcatcttgttgatataggaagtaccaaacaattcttataagccttccttcaaccatgcagtcccctacctgtacggcctcaagatctct 23350406  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||||||||    
T  23350407 ctcattccgatgtgattcagtt 23350428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 49998797 - 49998631
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  49998797 aagtcaaacacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagt 49998700  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||| |||| || || | |||||| ||||||||||||||||||| ||||    
T  49998699 cttccttcaaccatgcagtcccatgcctacacagccttaggatccctctcattccgatgtgatttagtt 49998631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 14572176 - 14572292
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctct 353  Q
    |||||| |||||| |||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| | ||| |||||||| ||||    
T  14572176 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctct 14572275  T
Q  354 cattccgatgtgattca 370  Q
    |||||||||||||||||    
T  14572276 cattccgatgtgattca 14572292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 23942768 - 23942949
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  23942768 aagtcaagcacgcttaactgtggagttcttatggaatgtgc--tacaaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 23942865  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
     ||||||||||||| ||||  |||||||| |||||  ||||||| |||||||||||||||||||| |||| |||| ||| ||||    
T  23942866 tttccttcaaccatgtagttccatacctacacggccccaggatccctctcattccgatgtgattcggttcctctagaagctgtc 23942949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 51331260 - 51331422
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| ||| || |||||||||||| ||||| ||||||||||| |||||     
T  51331260 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgtatcttgttgatatagatagtaccaaacaattcttataagc 51331357  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||||||||| ||||| |||||||| ||||| ||| |||  ||||||||||||||||||||    
T  51331358 cttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattc 51331422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 205 - 387
Target Start/End: Original strand, 53996094 - 53996274
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||  ||||  ||||||||||||| |||| |||  |||  ||||||| ||| || |||||||||||||||||| ||||||||| | |||||     
T  53996094 aagtcaagcacacttaactgtggagttcttatggaatgaga--taccaaaaagaagatgaatcttgttgatataggtagtaccaaacaatttttataagc 53996191  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgt 387  Q
     ||||||||||||| ||||| |||| ||| |  || ||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  53996192 attccttcaaccatgtagtcccatatctacatagcctcaggatccttctcattccgatgtgattcggttcctctaaaagttgt 53996274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 24628956 - 24629126
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||  ||   |||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  24628956 aagtcaagcacgcttaactgtggagttcttatggaacgagc--tactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 24629053  T
Q  305 c---ttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttc 374  Q
    |   |||||| ||||||  |||| |||||||| ||||| |||||| | ||||||||||| |||||||| ||||    
T  24629054 ctaattcctttaaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtgtgattcggttc 24629126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 8467824 - 8467937
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||  || |  |||||||| ||    
T  8467824 gaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatccct 8467923  T
Q  352 ctcattccgatgtg 365  Q
     |||||| ||||||    
T  8467924 ttcattctgatgtg 8467937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 21067443 - 21067261
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| ||||||| ||| |||||| ||   ||| | |||||| |||||| ||||||||||| |||||| |||| |||| | || |||    
T  21067443 aagtcaagcacgcttaattgtggagtacttttagaatgagc--taccggaaagaagatgcatcttgttgatatatgtagtaccaaataattattattagt 21067346  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||  |||||||||| |  ||| | || ||||| ||||||||||| ||||||||  |||||||| |||||||||    
T  21067345 cttccttcaaccatgcagtctcatacatgcacgacctcgggatccctctcattccggtgtgattcgattcgtctataagttgtcg 21067261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 388
Target Start/End: Original strand, 24629457 - 24629593
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||||  |||||| ||||||  |||| |||||||| ||| | |||||| | ||    
T  24629457 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcattcctttaaccatgcagtcccatacctacacgacctcaggaaccct 24629556  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||| |||||||| |||| |||| ||| ||||    
T  24629557 ctcattccggtgtgattcggttcctctagaagctgtc 24629593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 9423884 - 9424019
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctct 353  Q
    |||||| |||||| |||||||||||||||||| ||||||||| | ||||| |||| |||||||||  |||| ||||| |  ||| | |||||||| ||||    
T  9423884 aaagaagatgcatcttgttgatataggtagtaccaaacaattattataagccttctttcaaccatgcagtcccatacatgcacgacctcaggatccctct 9423983  T
Q  354 cattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||| |||||||| ||||||||| |||| ||||    
T  9423984 cattccggtgtgattcggttcgtctagaagtcgtcg 9424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 373
Target Start/End: Complemental strand, 41870039 - 41869913
Alignment:
Q  247 ttactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcagga 346  Q
    ||||||||||||| |||| | ||||||||||||||||||||| |||||||| |||||||||||||||| |||  |||| ||||  | ||| |  ||||||    
T  41870039 ttactgaaaagaagatgcgtcttgttgatataggtagtatcatacaattcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcagga 41869940  T
Q  347 tctctctcattccgatgtgattcagtt 373  Q
    || |||||| |||||||||||| ||||    
T  41869939 tccctctcactccgatgtgatttagtt 41869913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 7678601 - 7678727
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||  ||||  ||||||||||||| |||||||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  7678601 aagtcaagcacacttaactgtggagttcttatggaataagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 7678698  T
Q  305 cttccttcaaccatatagtctcataccta 333  Q
    |||||||||||||| ||| | ||||||||    
T  7678699 cttccttcaaccatgtagccccataccta 7678727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 248 - 373
Target Start/End: Original strand, 14571741 - 14571866
Alignment:
Q  248 tactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggat 347  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||  | |||||||||||  |||| |||||||| ||||  ||| |||    
T  14571741 tactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgaagtcccatacctacacggactcaagat 14571840  T
Q  348 ctctctcattccgatgtgattcagtt 373  Q
    | || |||||  ||||||||||||||    
T  14571841 ccctttcattatgatgtgattcagtt 14571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 357
Target Start/End: Original strand, 43928943 - 43929092
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||||||||| ||||| |||||||  |||||    |||  ||||||| |||||| |||||| |||| |||||| |||||||||||  ||||     
T  43928943 aagtcaagcacgtttaattgtggatttcttatgaaataac---taccaaaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttgtaagc 43929039  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcatt 357  Q
     ||||||| |||| ||||||||||||||  |||||||||||| | ||||||||    
T  43929040 tttccttcgaccaaatagtctcatacctgcacggcttcaggaaccctctcatt 43929092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 14351956 - 14351774
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||| ||||| ||  |||  ||||||| |||||| |||||||||||| ||||| |||| || ||| | |||     
T  14351956 aagtcaaacacgcttaactgtggagttcttatggaatagga--taccaaaaagaagatgcatcttgttgatatagatagtaccaaaaaactcttacaagc 14351859  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||  || ||||||| |  ||| | |||||||| ||||||||| | |||||||| ||| ||||| |||||||||    
T  14351858 cttccttcaaccatgcagactcatacatgcacgacctcaggatccctctcattctggtgtgattcggtttgtctagaagttgtcg 14351774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 13613877 - 13614057
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||||||||  ||| ||| |||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||    
T  13613877 aagtcaaacacgcttaactgtggagttcttatagaat--gaactaccgaaa-gaagatgcatcttgttgatataggtggtatcaaacaattcttataagt 13613973  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
      |||||| |||||  |||||||| | |  ||  | || ||||| ||||||||||  |||||||| |||  |||||||||||||    
T  13613974 actccttctaccatggagtctcatgcatgcacaacctctggatccctctcattccattgtgattcggtttatctaaaagttgtc 13614057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 15306070 - 15306234
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaa------caattctc 298  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||| |||||||||||| ||||      ||| |||     
T  15306070 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgtttatataggtagtaccaaaattgctcaaatctt 15306167  T
Q  299 ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtg 365  Q
    |||||||||| ||| ||||| ||||| |||||||| || || |||||||| ||||||||| ||||||    
T  15306168 ataagtcttctttcgaccatgtagtcccatacctacacagcctcaggatccctctcattctgatgtg 15306234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 21067834 - 21067716
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||||||||  |||| |||||||  ||||| || |||| ||   ||||| | ||||||    
T  21067834 ttgttgatataggtagcaccaaacaattcttataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatttc---cattctggtgtgat 21067738  T
Q  368 tcagttcgtctaaaagttgtcg 389  Q
    || ||||||||| || ||||||    
T  21067737 tcggttcgtctataatttgtcg 21067716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 24271580 - 24271690
Alignment:
Q  258 aatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct--atacggcttcaggatctctctca 355  Q
    ||||||||| |||||  |||||||||||||||| |||||| ||| ||||| ||| |||||| |||||||||||||  | ||| | |||||| | ||||||    
T  24271580 aatatgcatcttgttcgtataggtagtatcaaataattcttatatgtcttactttaaccatgtagtctcatacctgcacacgacctcaggaaccctctca 24271679  T
Q  356 ttccgatgtga 366  Q
    |||||||||||    
T  24271680 ttccgatgtga 24271690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 27026610 - 27026539
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||||||||| | | ||||| |||||||    
T  27026610 atgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaatcgtgtagtcccatacct 27026539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 17028979 - 17028869
Alignment:
Q  263 gcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgat 362  Q
    |||| |||||||||||||||| | | ||||||||| | || || ||||||||| ||  |||| ||||| |  | |||||||||||| |||||||||||||    
T  17028979 gcatcttgttgatataggtagcacctaacaattcttacaaatcctccttcaactatgcagtcccatacatgcaaggcttcaggatccctctcattccgat 17028880  T
Q  363 gtgattcagtt 373  Q
    |||||||||||    
T  17028879 gtgattcagtt 17028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 27578952 - 27579050
Alignment:
Q  271 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||| |||||| ||||||||||| ||||||||||  |||||||  |||| ||||||||| ||| ||| | |||| |||| |||||||||||||||    
T  27578952 ttgatatatgtagtaccaaacaattcttataagtcttcagtcaaccaagtagtgtcatacctacacgactttaagatccctcttattccgatgtgattc 27579050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 27029393 - 27029317
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcat 328  Q
    |||||||| |||||| ||||||||||| |||||| |||| |||||| |||||||||||||||| | | |||||||||    
T  27029393 gaaaagaagatgcatcttgttgatataagtagtaccaaataattcttataagtcttccttcaatcgtgtagtctcat 27029317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 42838730 - 42838628
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| |||||||||||||||||| ||||||||| | ||| ||||||||| ||| || ||||||||||| || || |  |||||||| ||||||||| |    
T  42838730 atgcattttgttgatataggtagtaccaaacaatttttatacgtcttccttgaactatgtagtctcatacttacacagtctcaggatc-ctctcattctg 42838632  T
Q  361 atgt 364  Q
    ||||    
T  42838631 atgt 42838628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 17628627 - 17628561
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 318  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||| ||||| || |||||||||||    
T  17628627 gaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagcctaccttcaaccat 17628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 23943221 - 23943332
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||| |||| | || | ||||||    
T  23943221 aagtcaagcacgcttaactgtggagttcttatggaatgtgc--taccaaaaagaagatgcatcttgttgatataggtagtaccaaatattttttataagt 23943318  T
Q  305 cttccttcaaccat 318  Q
    ||||||||||||||    
T  23943319 cttccttcaaccat 23943332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 318
Target Start/End: Original strand, 31817876 - 31817942
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 318  Q
    |||||||| |||||| |||||| ||||||||||| | ||||||||| ||||| ||||||||||||||    
T  31817876 gaaaagaagatgcatcttgttggtataggtagtaccgaacaattcttataagccttccttcaaccat 31817942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 302
Target Start/End: Original strand, 50814804 - 50814899
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataa 302  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||| ||||| ||||||||||| ||||    
T  50814804 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataa 50814899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 31817422 - 31817539
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||| | ||||   |||||||||||||  |||||||||| |  ||| | ||| |||| ||    
T  31817422 gaaaagaagatgcattttgttggtataggtagtaccaaacaattattataaacgttccttcaaccatgaagtctcatacatgcacgacctcatgatccct 31817521  T
Q  352 ctcattccgatgtgattc 369  Q
    || ||| |||||||||||    
T  31817522 cttatttcgatgtgattc 31817539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 365
Target Start/End: Complemental strand, 53392003 - 53391890
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||| |||||| || |||||||||||| | ||||||||||||| | |||||  || ||||||||||  ||||||||||   |||  ||||| |||||||    
T  53392003 gaaaaaaatatgtatcttgttgatatagatggtatcaaacaatttttataagcatttcttcaaccatgcagtctcatactcttacaacttcaagatctct 53391904  T
Q  352 ctcattccgatgtg 365  Q
    ||||||| ||||||    
T  53391903 ctcattctgatgtg 53391890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 17029440 - 17029325
Alignment:
Q  258 aatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcatt 357  Q
    ||||||||| ||||||||||||||||||  |||||||| | | |||||||| |||||| ||  |||| ||||| |  ||| | ||  |||| ||||||||    
T  17029440 aatatgcatcttgttgatataggtagtactaaacaattattacaagtcttcattcaactatgcagtcccatacttgcacgacctctagatccctctcatt 17029341  T
Q  358 ccgatgtgattcagtt 373  Q
    ||||||| ||||||||    
T  17029340 ccgatgtaattcagtt 17029325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 26200311 - 26200425
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataag--tcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||||||||||| |||||  ||||| ||||||||||||||| | |||||  |||||||||||||||   ||| |||||||| ||    |||||||| ||    
T  26200311 aaagaatatgcatcttgtttgtatagttagtatcaaacaattgttataagcctcttccttcaaccatgatgtcccatacctacacaatatcaggatccct 26200410  T
Q  352 ctcattccgatgtga 366  Q
    ||||||| |||||||    
T  26200411 ctcattctgatgtga 26200425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 390
Target Start/End: Complemental strand, 44831113 - 44830977
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||||||||| ||| |||||  | ||||||||| ||||||||| | |||||  | ||||||||||| || |||||||| ||   ||| | ||  |  ||    
T  44831113 gaaaagaatatacatcttgttagtttaggtagtaccaaacaatttttataagcttcccttcaaccatgtaatctcatacttacgtggcatgag--ttcct 44831016  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcga 390  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  44831015 ctcattccgatgtgattcggttcatctaaaagttgtcga 44830977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 23976244 - 23976305
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaa 314  Q
    ||||||| |||||| |||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  23976244 aaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataactcttccttcaa 23976305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 33764975 - 33764898
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatac 330  Q
    ||||||| |||||| |||||| ||||||||| | ||||||||||| | |||||||| | ||||||| |||||| ||||    
T  33764975 aaaagaagatgcatcttgttggtataggtagcaccaaacaattcttaaaagtcttcatccaaccatgtagtcttatac 33764898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 52048699 - 52048804
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| |||||  |||| |||||||||||||||||| |||| | |||||||| | ||  ||| |||||||| |||||| | |||| | |||||||||||    
T  52048699 atgcatcttgttagtatacgtagtatcaaacaattcttataaattttccttcagctatgcagtttcatacctgtacggccttaggaaccctctcattccg 52048798  T
Q  361 atgtga 366  Q
    | ||||    
T  52048799 acgtga 52048804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 4185830 - 4185751
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    ||||||| |||||| |||||| |||| || ||||||||||||||| ||| || |||||| ||||||   |||||||||||    
T  4185830 aaaagaagatgcatcttgttggtatatgtggtatcaaacaattcttatatgtattcctttaaccatgccgtctcatacct 4185751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 35477836 - 35477801
Alignment:
Q  335 acggcttcaggatctctctcattccgatgtgattca 370  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35477836 acggcctcaggatctctctcattccgatgtgattca 35477801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 10165977 - 10165939
Alignment:
Q  345 gatctctctcattccgatgtgattcagttcgtctaaaag 383  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  10165977 gatctttctcattccgatgtgattcggttcgtctaaaag 10165939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 370
Target Start/End: Complemental strand, 13266202 - 13266084
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||| || |||||| || |||||||||| ||||  ||| |||| | ||||| ||||||||||||||  | || |||||||  ||||||| | |||| ||    
T  13266202 gaaaataagatgcatcttattgatatagggagtactaaaaaattattataagccttccttcaaccatgcattcccatacctgcacggctttaagatccct 13266103  T
Q  352 ctcattccgatgtgattca 370  Q
    |||||||  ||||||||||    
T  13266102 ctcattctaatgtgattca 13266084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 2499647 - 2499727
Alignment:
Q  281 tagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccga 361  Q
    ||||| ||||||||| | |||||| || ||||||||||  ||||||||||||  |||| || || ||| ||||||||||||    
T  2499647 tagtaccaaacaatttttataagtgttgcttcaaccatgaagtctcatacctgcacggttttagaatccctctcattccga 2499727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 332
Target Start/End: Original strand, 27578481 - 27578561
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    |||||||| |||||| |||||||||||||||| | |||| |||||| ||||  | || |||||||| | ||||||| ||||    
T  27578481 gaaaagaagatgcatcttgttgatataggtagcaccaaataattcttataaaccatcattcaaccacacagtctcacacct 27578561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 9e-46; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 209 - 389
Target Start/End: Original strand, 20896677 - 20896855
Alignment:
Q  209 caagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttc 308  Q
    |||||||| |||| |||||||||||||| |||| ||   |||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||    
T  20896677 caagcacgcttaaccgtggagttcttatggaatgagc--tactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttc 20896774  T
Q  309 cttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||| |||||||||||||| ||||| | |||||| |||||||||||||||||||| | | ||||| |||||||||    
T  20896775 cttcaaccatgtagtctcatacctacacggcctaaggatccctctcattccgatgtgattcggcttgtctagaagttgtcg 20896855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 6330897 - 6331079
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  6330897 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgcatattgttgatataggtagtaccaaacaattcttataagt 6330994  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||  ||||||||||||||||||| | | ||||| |||||||||    
T  6330995 cttccttcaaccatgtagtctcatacctacacggcctcaggatccatctcattccgatgtgattcggcttgtctagaagttgtcg 6331079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 369
Target Start/End: Complemental strand, 16520129 - 16519967
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||| |||||||||     
T  16520129 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaaatctcataagc 16520032  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||| ||||| |||||||||||||| || || |||||||| ||||||||||||||||||||    
T  16520031 cttccttcgaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgattc 16519967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20126167 - 20126348
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| ||||| ||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||||||||| ||||| |||||     
T  20126167 aagtcaagcacgcttaattgtggaattcttatggaatgtgc--taccaaaaagaagatgcatcttgttgatataggtagtatcaaaccattcttataagc 20126264  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||||||||||||| |||||||||||||| || || | |||||| |||||||||||||||||||||| | ||||| ||||||||    
T  20126265 cttccttcaaccatgtagtctcatacctacacagccttaggatccctctcattccgatgtgattcagcttgtctagaagttgtc 20126348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 224 - 389
Target Start/End: Complemental strand, 3652628 - 3652465
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| ||||  ||| |||  ||||||| |||||| ||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||    
T  3652628 gtggagttcttatggaat--gaactaccaaaaagaagatgcatcttgttgatataggtagtatcagacaattcttataagccttccttcaaccatgtagt 3652531  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    | |||||||| || || |||||||| |||||||||||||||||||| |||| |||| ||| |||||    
T  3652530 cccatacctacacagcctcaggatccctctcattccgatgtgattcggttcctctagaagctgtcg 3652465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 369
Target Start/End: Original strand, 14771723 - 14771866
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||||   |||||  ||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||    
T  14771723 gtggagttcttatggaatag--attaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagt 14771820  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||||| |||||||| ||||| |||||||||||  |||||||    
T  14771821 ctcatacctacacggcttcgggatccctctcattccggcgtgattc 14771866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 202 - 373
Target Start/End: Complemental strand, 13492953 - 13492784
Alignment:
Q  202 tctaagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcata 301  Q
    ||||||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||| | |||    
T  13492953 tctaagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattattata 13492856  T
Q  302 agtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    || ||||||||||||||  ||||||||||||  || || ||||||||  |||||||||||| ||||||||||    
T  13492855 agccttccttcaaccatgcagtctcatacctgcacagcctcaggatccttctcattccgatatgattcagtt 13492784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 7912471 - 7912305
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||||||||   |||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||  ||||||    
T  7912471 aagtcaagcacgtttaactatggagttcttatggaatgagc--taccgaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcatataagt 7912374  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
     |||||||||||||  |||| |||||||  ||||| ||  |||| ||||||||||||||||||||||||    
T  7912373 tttccttcaaccatgcagtcccatacctgcacggcctcgagatccctctcattccgatgtgattcagtt 7912305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 23986347 - 23986484
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||| |||||||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||| || ||||| ||    
T  23986347 gaaaagaagatgcatcttgttcatataggtagtaccaaacaattcttataagcctaccttcaaccatgtagtcccatacctacacggcctccggatccct 23986446  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||||||| |||| |||| ||| |||||    
T  23986447 ctcattccgatgtgattcggttcctctagaagctgtcg 23986484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 210 - 379
Target Start/End: Original strand, 2681206 - 2681373
Alignment:
Q  210 aagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttcc 309  Q
    ||||||| ||||| ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||| ||||||| ||||||||||| ||||||||||     
T  2681206 aagcacgcttaattgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatatgggtagtaccaaacaattcttataagtcttca 2681303  T
Q  310 ttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
    |||||||||  |||| || ||||| ||||| |||||| | ||||||||||| |||||||| |||| ||||    
T  2681304 ttcaaccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtgtgattcggttcctcta 2681373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 17027516 - 17027682
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| ||| || |||||||||||||||||| ||||||||||| |||||     
T  17027516 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagc 17027613  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| |||||||  ||||| || ||||| ||||||||||||||||||| ||||    
T  17027614 cttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgatttagtt 17027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 17731094 - 17731261
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgt----tgttgatataggtagtatcaaacaattctcat 300  Q
    |||||||||||| ||||  |||||||||||| ||||| ||   ||| |||||||| |||||| |    ||||||||||||||||| ||||||||||| ||    
T  17731094 aagtcaagcacgcttaaatgtggagttcttaaagaatgagc--taccgaaaagaagatgcatctatcttgttgatataggtagtaccaaacaattcttat 17731191  T
Q  301 aagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    ||||||||||| ||||||  |||| |||||||  ||||| |||||||| |||||||||||||||||||||    
T  17731192 aagtcttcctttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccgatgtgattca 17731261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 23776557 - 23776420
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| | ||| |||||||  ||    
T  23776557 gaaaagaagatgcatcttgttgatataggtagtaccagacgattcttataagtcttccttcaaccatgtagtcccatacctacaaggcctcaggatacct 23776458  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||  |||||||||||| |||| ||| |||||    
T  23776457 ctcattccggcgtgattcagttcctctagaagctgtcg 23776420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 368
Target Start/End: Complemental strand, 9352223 - 9352062
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||| |||||||||||| ||||||| | | ||||||    
T  9352223 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgtttatataggtagtaccaaacaaatattataagt 9352126  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgatt 368  Q
    || ||||| ||||| |||||||||||||| || || |||||||| |||||||| ||||||||||    
T  9352125 ctcccttcgaccatgtagtctcatacctacacagcctcaggatccctctcatttcgatgtgatt 9352062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 373
Target Start/End: Complemental strand, 7912020 - 7911873
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||| |||||||||||||  |||    
T  7912020 gtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagttttccttcaaccatgcagt 7911923  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |  ||||||  ||||| ||  |||| ||||||||||||||||||||||||    
T  7911922 cctatacctgcacggcctcgagatccctctcattccgatgtgattcagtt 7911873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 20850482 - 20850301
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  || |||||||||| |||| ||   ||| |||||||| |||||| ||||||||||||||||||  |||||||||| |||||     
T  20850482 aagtcaagcacgcttaactgtagagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacaaaacaattcttataagc 20850385  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| ||| || | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20850384 cttccttcaaccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtgtgattcggttcctctagaagctgtc 20850301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 13191543 - 13191664
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||| |  |  | |||||| ||    
T  13191543 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctacatagtcttaggatccct 13191642  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||| ||||    
T  13191643 ctcattccgatgtgatttagtt 13191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 393
Target Start/End: Complemental strand, 17851535 - 17851349
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| ||||||||||||||||||  |   |||  ||||||| |||||| ||||||||| |||||||| ||||||  ||| |||||     
T  17851535 aagtcaagcacgcttaattgtggagttcttatagaatgggc--taccaaaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttataagc 17851438  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaaag 393  Q
    |||| || ||||||  |||| ||||| |  ||||| || ||||| ||||||||||| |||||||| ||||||||| |||||||| ||||    
T  17851437 cttcttttaaccatgcagtcccatacttgcacggcctcgggatccctctcattccggtgtgattcggttcgtctagaagttgtctaaag 17851349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 31821731 - 31821839
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| |||||||||||| ||||| |||| |||||| |||||  ||||||||||||| |||||||||||||| | ||| ||| |||| |||||||||||    
T  31821731 atgcatcttgttgatatagttagtaccaaataattcttataagcattccttcaaccatgtagtctcatacctacatggcctcatgatccctctcattccg 31821830  T
Q  361 atgtgattc 369  Q
    |||||||||    
T  31821831 atgtgattc 31821839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 11062446 - 11062275
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| ||||||||||||||||||  ||||| |||| |||||     
T  11062446 aagtcaagcacgcttaactgtggagttcttatggaatgggc--taccaaaaagaagatgcatcttgttgatataggtagtacaaaacacttcttataagc 11062349  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
    |||||||||||||| |||| ||||||||| || || |||||||| |||||||  ||||||||||| |||| ||||    
T  11062348 cttccttcaaccatgtagtttcatacctacacagcctcaggatc-ctctcatgtcgatgtgattcggttcctcta 11062275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 15929724 - 15929562
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| |||| |||||| ||||| |||| ||||||||| ||||    
T  15929724 gtggagttcttatggaatgagc--taccgaaaagaagatgcattttgttgatataggtagtaccaaataattcttataagccttcattcaaccatgtagt 15929627  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |  |||| || | ||| | ||||||||||| |||| ||||||||||  ||| |||| ||||||||    
T  15929626 ccaatacatacaaggcattaggatctctcttattctgatgtgattcgattcatctagaagttgtc 15929562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 21312086 - 21311965
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| | ||||||||| ||||| ||||||||||||||  ||||||||||||  || || ||| || | |||    
T  21312086 aaaagaagatgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaaccatgcagtctcatacctgcacagcctcatgaaccctc 21311987  T
Q  353 tcattccgatgtgattcagttc 374  Q
    |||||| | |||||||||||||    
T  21311986 tcattctggtgtgattcagttc 21311965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 373
Target Start/End: Original strand, 9440485 - 9440579
Alignment:
Q  279 ggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||| ||||||||||| ||||| |||| |||||||||  |||| |||||||  ||| |||||||||| ||||||||||||||||||||||||    
T  9440485 ggtagtaccaaacaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccgatgtgattcagtt 9440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 9440339 - 9440456
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||| | ||||||||| |||||  ||| |||||||||  |||  |||||||  ||| |||||||||| ||    
T  9440339 gaaaagaaaatgcatcttgttgatataagtagtaccgaacaattcttataagctttcattcaaccatgcagttccatacctgcacgacttcaggatccct 9440438  T
Q  352 ctcattccgatgtgattc 369  Q
    ||||||||||||||||||    
T  9440439 ctcattccgatgtgattc 9440456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 2720610 - 2720730
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||  ||| | |  ||||| ||||||||||| | ||||    
T  2720610 ttgttaatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatacctgcacgaccttgggatccctctcattccggtatgat 2720709  T
Q  368 tcagttcgtctaaaagttgtc 388  Q
    |  ||||||||| ||| ||||    
T  2720710 ttggttcgtctagaagctgtc 2720730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 367
Target Start/End: Complemental strand, 20735811 - 20735696
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||| ||| ||||| |||||||| || |  ||| |||| ||    
T  20735811 gaaaagaagatgcatcttgttgatataagtagtatcaaacaattcttataagccttcctacaatcatgtagtcacatacctacacagtctcaagatccct 20735712  T
Q  352 ctcattccgatgtgat 367  Q
    ||||||  ||||||||    
T  20735711 ctcattatgatgtgat 20735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 379
Target Start/End: Complemental strand, 27334277 - 27334150
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| || ||| |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||  |||||||  ||| | |||||| | ||    
T  27334277 gaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccct 27334178  T
Q  352 ctcattccgatgtgattcagttcgtcta 379  Q
    ||| ||||| ||||||||||||| ||||    
T  27334177 ctcgttccggtgtgattcagttcctcta 27334150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 379
Target Start/End: Complemental strand, 27395017 - 27394890
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| || ||| |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||  |||||||  ||| | |||||| | ||    
T  27395017 gaaaagaagattcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccct 27394918  T
Q  352 ctcattccgatgtgattcagttcgtcta 379  Q
    ||| ||||| ||||||||||||| ||||    
T  27394917 ctcgttccggtgtgattcagttcctcta 27394890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 15929315 - 15929219
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatc 348  Q
    ||||||||||||||| || |||||||||| | || ||||||||||| |||||  || |||||||| | |||||||||||||| ||||| ||||||||    
T  15929315 gaaaagaatatgcatcttattgatataggcattaccaaacaattcttataagcttttcttcaaccttgtagtctcatacctaaacggcctcaggatc 15929219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 369
Target Start/End: Complemental strand, 21311630 - 21311514
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| ||| || ||||| || |||||| || ||||||||||| ||||| ||||||||||||||  |||| ||||| | |||||| ||| || | |||    
T  21311630 aaaagaagatggatcttgtttatctaggtaataccaaacaattcttataaggcttccttcaaccatgcagtcccatacttgtacggcctcatgaaccctc 21311531  T
Q  353 tcattccgatgtgattc 369  Q
    |||||||||||||||||    
T  21311530 tcattccgatgtgattc 21311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 13492493 - 13492397
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataag 303  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  13492493 aagtcaagcacgcttaactgtggagttcttatggaattagc--taccgaaaagaagatgcatcttgttgatataggtaatatcaaacaattcttataag 13492397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 2890824 - 2890985
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||||||||||| | |||| || ||||||||||||||  | ||||||||| ||||      
T  2890824 aagtcaagcacgcttaactgtggagttcttatggaatgggc--tactgaaaagaagaagcatctttttgatataggtagtccctaacaattcttataaac 2890921  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    ||||||||||||||  |||| |||||||  ||||| || ||||| |||||||||  |||||||||    
T  2890922 cttccttcaaccatgcagtcccatacctgcacggcctcgggatc-ctctcattctaatgtgattc 2890985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 17851079 - 17850897
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||||||||  |   |||   |||||| |||||| ||||||||| |||||||| ||||||  ||| || ||     
T  17851079 aagtcaagcacgcttaactgtggagttcttatagaatgggc--taccagaaagaagatgcatcttgttgataaaggtagtaccaaacatatcttatcagc 17850982  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
     ||| || ||||||  |||| ||||| |  ||| | |||||||| ||||||||||| |||||||| ||||||||| |||||||||    
T  17850981 attcttttaaccatgcagtcccatacttgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagttgtcg 17850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 332
Target Start/End: Complemental strand, 20732694 - 20732614
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    ||||||||||||||| || || |||||||||||| |||| |||||| ||||| |||||| ||||||| ||||| |||||||    
T  20732694 gaaaagaatatgcatattattaatataggtagtaccaaataattcttataagccttcctacaaccatgtagtcacatacct 20732614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 32293006 - 32292887
Alignment:
Q  247 ttactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcagga 346  Q
    ||||| |||| || ||| || |||||| ||||||||||| ||||||||||| ||||| |||| |||||||||  ||||||||||||  |||   | ||||    
T  32293006 ttactaaaaacaagatgtattttgttggtataggtagtaccaaacaattcttataagccttcattcaaccatgcagtctcatacctgcacgatctaagga 32292907  T
Q  347 tctctctcattccgatgtga 366  Q
    | ||||||||||| ||||||    
T  32292906 tttctctcattccaatgtga 32292887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 28065877 - 28065982
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| ||||||||| || ||||| ||||||||||| |||||  ||| ||||| |||| ||||||||  ||| ||| | | |||||| |||||||||||    
T  28065877 atgcatcttgttgatagagatagtaccaaacaattcttataagctttcattcaatcatacagtctcatttctacacgaccttaggatccctctcattccg 28065976  T
Q  361 atgtga 366  Q
    ||||||    
T  28065977 atgtga 28065982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 9440883 - 9440958
Alignment:
Q  248 tactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    |||||||||||| |||||| ||||||||| | |||||| |||| |||||| |||||  ||||||||||||| ||||    
T  9440883 tactgaaaagaaaatgcatcttgttgataaaagtagtaccaaagaattcttataagcattccttcaaccatgtagt 9440958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 10964419 - 10964340
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    ||||||||||  || || |||||||| |||||| |||||||||||  |||||||| |||| |||||| ||||||||||||    
T  10964419 aaaagaatatttattttattgatatatgtagtaccaaacaattcttgtaagtctttcttctaccatacagtctcatacct 10964340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 3653048 - 3652958
Alignment:
Q  299 ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||| |||| |||||||||  |||| |||||||| || || |||||||| ||||||||||||||||| || |||| |||| ||| |||||    
T  3653048 ataagccttcgttcaaccatgcagtcccatacctacacagcctcaggatccctctcattccgatgtgagtcggttcatctagaagctgtcg 3652958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 28583070 - 28583012
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccata 319  Q
    |||||| |||||||||||| | |||||||| |||||| ||||| |||| ||||||||||    
T  28583070 atgcatcttgttgatatagatcgtatcaaataattcttataagccttcattcaaccata 28583012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 332
Target Start/End: Complemental strand, 1991669 - 1991589
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    |||||||| |||||| ||||| | ||| ||| || |||||||||||  |||| |||| | ||||||| |||||||||||||    
T  1991669 gaaaagaagatgcatcttgtttagatatgtaataccaaacaattcttgtaagccttcttccaaccatgtagtctcatacct 1991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 205 - 391
Target Start/End: Original strand, 30872935 - 30873119
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||| | ||||| ||||||||||||||||||  | | |||  ||||||| |||||| |||||||||||||||||||||||||||||| | ||||    
T  30872935 aagtcaagcatgcttaattgtggagttcttatagaat--ggactaccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttaaaagt 30873032  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaa 391  Q
    ||||||||||||||| ||||||||||||  ||||| |||| ||| ||||||||||| |||||||| ||||||||| || ||||||||    
T  30873033 cttccttcaaccatacagtctcatacctgcacggcctcagaatccctctcattccggtgtgattcggttcgtctagaaattgtcgaa 30873119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 43057553 - 43057690
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||| |||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||| ||    
T  43057553 gaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggatccct 43057652  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||||||| |||| |||||||| |||||    
T  43057653 ctcattccgatgtgattcggttcctctaaaagctgtcg 43057690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 16451918 - 16452080
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  ||| ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  16451918 aagtcaagcacgcttaactgtggagttcttatggaat--gaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 16452015  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
     ||||||||||||| ||||| | |||||| | ||| |||||||| ||||||||||||||||||||    
T  16452016 tttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgattc 16452080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 16461071 - 16461233
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  ||| ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  16461071 aagtcaagcacgcttaactgtggagttcttatggaat--gaactaccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 16461168  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
     ||||||||||||| ||||| | |||||| | ||| |||||||| ||||||||||||||||||||    
T  16461169 tttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgattc 16461233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 50002737 - 50002854
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| ||| |||| ||||| |||||||||||    
T  50002737 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatgcctacacggcctcaggatctct 50002836  T
Q  352 ctcattccgatgtgattc 369  Q
    ||||||||||||||||||    
T  50002837 ctcattccgatgtgattc 50002854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20054521 - 20054702
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20054521 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20054618  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20054619 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20054702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20054977 - 20055158
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20054977 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20055074  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20055075 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20055158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20055433 - 20055614
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20055433 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20055530  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20055531 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20055614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20055889 - 20056070
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20055889 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20055986  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20055987 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20056070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20056345 - 20056526
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20056345 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20056442  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20056443 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20056526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20057248 - 20057429
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20057248 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20057345  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20057346 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20057429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 20845646 - 20845827
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20845646 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaacaaacaattcttataagc 20845743  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  ||||||||||||  ||||| |||||| |  |||||||||| |||||||| |||| |||| ||| ||||    
T  20845744 cttccttcaaccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagctgtc 20845827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 388
Target Start/End: Original strand, 20054066 - 20054246
Alignment:
Q  206 agtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtc 305  Q
    ||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| |    
T  20054066 agtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcc 20054163  T
Q  306 ttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  20054164 ttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 20054246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 35759593 - 35759756
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||||||||   || ||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  35759593 aagtcaagcacgtttaactatgaagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 35759690  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
     |||||||||||||  |||| |||||||  ||||| |||||||| |||||||||||||||||||||    
T  35759691 tttccttcaaccatgcagtcccatacctgcacggcctcaggatccctctcattccgatgtgattca 35759756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 35760945 - 35761062
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||  |||||||||||||  ||||||||||||  ||||| |||||||| |||    
T  35760945 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagtctcatacctgcacggcctcaggatccctc 35761044  T
Q  353 tcattccgatgtgattca 370  Q
    ||||||||||||||||||    
T  35761045 tcattccgatgtgattca 35761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 409
Target Start/End: Original strand, 43057047 - 43057252
Alignment:
Q  202 tctaagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcata 301  Q
    |||||||||| |||| ||||  ||||||||||||| ||||  |   ||| |||||||| |||||| ||||||||||||||||||||||||||||||  ||    
T  43057047 tctaagtcaatcacgcttaactgtggagttcttatggaatgggc--taccgaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttcta 43057144  T
Q  302 agtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaaagtc-ctcat 400  Q
    || |||||||||||||| ||||| |||||||| ||||| | |||||| | ||||||| |||||||||| |||| |||| || ||||||  |||| |||||    
T  43057145 agccttccttcaaccatgtagtcacatacctacacggccttaggatc-ccctcattctgatgtgattcggttcctctagaaattgtcgggagtcgctcat 43057243  T
Q  401 tgttatgcc 409  Q
    ||| |||||    
T  43057244 tgtcatgcc 43057252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 52250367 - 52250185
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  52250367 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 52250270  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||| ||||| ||||| |||||||| | ||| ||| |||| ||||||||||| |||||||| |||| |||| ||| |||||    
T  52250269 cttccttcgaccatgtagtcccatacctacaaggcctcatgatccctctcattccggtgtgattcggttcctctagaagctgtcg 52250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 224 - 379
Target Start/End: Original strand, 50002289 - 50002442
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||| ||   ||| |||||||| |||||| ||||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||    
T  50002289 gtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgataaaggtagtaccaaacaattcttataagccttccttcaaccatgtagt 50002386  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
    | ||| |||| ||||| ||| |||| |||||||||||||||||||| |||| ||||    
T  50002387 cccatgcctacacggcctcatgatccctctcattccgatgtgattcggttcctcta 50002442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 379
Target Start/End: Original strand, 20057704 - 20057876
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20057704 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20057801  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
    |||| |||||||||  |||| |||||||  ||||| |||||| | |||||||| || ||||||||||||| ||||    
T  20057802 cttctttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcatttcggtgtgattcagttcctcta 20057876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 368
Target Start/End: Original strand, 31822693 - 31822809
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||| |||| |||||| |||| ||||||||||||||| |||||||||||||| ||||| ||| |||| ||    
T  31822693 gaaaagaagatgcatattgttgatatatgtagtaccaaataattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcatgatccct 31822792  T
Q  352 ctcattccgatgtgatt 368  Q
    ||||||| |||||||||    
T  31822793 ctcattctgatgtgatt 31822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 373
Target Start/End: Original strand, 20061195 - 20061342
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||  |||||||||||||  |||    
T  20061195 gtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgcagt 20061292  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    | |||||||  ||| | |||||||| ||||||||| ||||||||||||||    
T  20061293 cccatacctgcacgacctcaggatccctctcattctgatgtgattcagtt 20061342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 2328430 - 2328310
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| ||||| |||||||||||| ||||||||||| ||||| ||||||||||||||  |||| ||||||| |||||| |||  || ||||    
T  2328430 aaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcataatttctc 2328331  T
Q  353 tcattccgatgtgattcagtt 373  Q
    ||||||| |||||||||||||    
T  2328330 tcattccaatgtgattcagtt 2328310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 7548206 - 7548086
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    |||||||||||||| |||||||||||| || || ||||||||| | ||||||||||||| || ||| |||||||||||||| ||||| ||| |||| |||    
T  7548206 aaaagaatatgcatcttgttgatatagttaataccaaacaatttttataagtcttcctttaatcatgtagtctcatacctacacggcctcatgatccctc 7548107  T
Q  353 tcattccgatgtgattcagtt 373  Q
    ||||| | |||||||||||||    
T  7548106 tcattgcaatgtgattcagtt 7548086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 38341067 - 38340886
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||| ||||||||| |||| ||   ||| |||| ||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  38341067 aagtcaagcacgcttaactgtgaagttcttatggaatgagc--taccgaaatgaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 38340970  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| |  |||||||||| |||||||| |||| |||| ||| ||||    
T  38340969 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtgtgattcggttcctctagaagctgtc 38340886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 390
Target Start/End: Complemental strand, 12883639 - 12883502
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||| ||||||||| |||  |||| |||||||  || || || |||||  ||    
T  12883639 aaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagtattccttcaatcatgcagtcccatacctgcacagcctcgggatccatc 12883540  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcga 390  Q
    |||||||| |||||||| ||||||||| ||| ||||||    
T  12883539 tcattccggtgtgattcggttcgtctagaagctgtcga 12883502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 46693720 - 46693884
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||| ||||  ||| |||  ||| |||||||| |||||| |||||||||||||||||| ||||||||| | |||||     
T  46693720 aagtcaagcacgcttaactgtggagttattatgaaatgaga--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagc 46693817  T
Q  305 cttccttcaaccat-atagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    |||||||||||||| | |||| ||||| |  ||| | | |||||| |||||||||||||||||||||    
T  46693818 cttccttcaaccatcacagtcccatacatgcacgaccttaggatccctctcattccgatgtgattca 46693884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 374
Target Start/End: Original strand, 50003101 - 50003227
Alignment:
Q  248 tactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggat 347  Q
    |||||||||||| |||||| |||||||||||||||||| | ||||||| | |||||||| |||| ||||||  ||||  ||||||  | ||| |||||||    
T  50003101 tactgaaaagaagatgcatcttgttgatataggtagtacccaacaattattataagtctccctttaaccatgcagtcctatacctgcatggcctcaggat 50003200  T
Q  348 ctctctcattccgatgtgattcagttc 374  Q
    | |||||||||||||||||||| ||||    
T  50003201 ccctctcattccgatgtgattcggttc 50003227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 358
Target Start/End: Original strand, 51372859 - 51373010
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| ||||| || |||||| |||| |||||||||||||  |||||||||| |||||     
T  51372859 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaataagatgcatcttgtcgatataggtagtactaaacaattcttataagc 51372956  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattc 358  Q
    ||||||||||||||| |||| ||||||| || ||| || ||||| |||||||||    
T  51372957 cttccttcaaccatacagtcacatacctgtatggcctcgggatccctctcattc 51373010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 20056801 - 20056910
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| |||||||||||||||||     
T  20056801 aagtcaaacacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattctcataagc 20056898  T
Q  305 cttccttcaacc 316  Q
    ||||||||||||    
T  20056899 cttccttcaacc 20056910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 389
Target Start/End: Complemental strand, 10820689 - 10820571
Alignment:
Q  271 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||  |||| || || || |||  ||| |||||| |||||||||||||     
T  10820689 ttgatataggtagtaccaaacaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcactccgatgtgattcg 10820590  T
Q  371 gttcgtctaaaagttgtcg 389  Q
    |||| |||| |||||||||    
T  10820589 gttcatctagaagttgtcg 10820571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 2635066 - 2634923
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| |||| ||   ||| |||||||| |||||| |||||| ||||||||||| ||||||||||| || |||  ||||||||||||  |||    
T  2635066 gtggagttcttattgaatgagc--taccgaaaagaagatgcatcttgttggtataggtagtaccaaacaattcttatgagttatccttcaaccatgcagt 2634969  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    | |||||||  ||  | ||| |||| ||||||||||||||||||||    
T  2634968 cccatacctgcacaacctcatgatccctctcattccgatgtgattc 2634923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 370
Target Start/End: Complemental strand, 23180830 - 23180728
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||||||||||||||| ||| ||||||| ||||   ||||||||||||  ||||| ||| |||| ||||||||| |||| |||||||||| |||||||    
T  23180830 ttgttgatataggtagtaccaagcaattcttataatcattccttcaaccacgtagtcccattcctacacggcttcaagatccctctcattccaatgtgat 23180731  T
Q  368 tca 370  Q
    |||    
T  23180730 tca 23180728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 332
Target Start/End: Complemental strand, 16907353 - 16907270
Alignment:
Q  249 actgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    ||||||||||| ||| || |||||||||||||||||| ||||||||||| ||||| |||| |||||||||  ||| ||||||||    
T  16907353 actgaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagccttctttcaaccatgcagtttcatacct 16907270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 12728108 - 12728026
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatc-aaacaattctcataagtcttccttcaaccatatagtctcataccta 333  Q
    |||||||| |||||| ||||||||||||| |||| | |||||||||| |||||||||||||||||||| | ||| ||||||||    
T  12728108 gaaaagaagatgcatcttgttgatataggcagtaaccaaacaattcttataagtcttccttcaaccatgttgtcccataccta 12728026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 20060325 - 20060431
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||  ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  20060325 aagtcaagcacacttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 20060422  T
Q  305 cttccttca 313  Q
     ||||||||    
T  20060423 tttccttca 20060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 16440610 - 16440675
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 318  Q
    |||||||||||||| |||||| ||| ||||||| |||||| |||| ||||||||| ||||||||||    
T  16440610 aaaagaatatgcatcttgttgttatcggtagtagcaaacagttcttataagtctttcttcaaccat 16440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 2739637 - 2739554
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatac 336  Q
    ||||||| || ||| ||||||||||| |||||   |||||||||| ||||||||| | | ||||||| ||||||||||||||||    
T  2739637 aaaagaagatacatattgttgatatatgtagtgctaaacaattcttataagtctttccttaaccatacagtctcatacctatac 2739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 9e-43; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 253 - 389
Target Start/End: Complemental strand, 2044173 - 2044037
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| |||    
T  2044173 aaaagaaaatgcatcttgttgatataggtagtatcaaacaattcttataagccttccttcaaccatgtagtctcatacctacacagcctcaggatccctc 2044074  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||||| |||| |||| |||||||||    
T  2044073 tcattccgatgtgattctgttcctctagaagttgtcg 2044037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 205 - 363
Target Start/End: Complemental strand, 17103242 - 17103086
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| |||| |||||||||||||| |||| ||   ||| |||||||| |||||  ||||||||||||| |||| ||||||||||| ||||||    
T  17103242 aagtcaagcacgcttaaccgtggagttcttatggaatgagc--taccgaaaagaagatgcagcttgttgatataggcagtaccaaacaattcttataagt 17103145  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatg 363  Q
    ||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||||    
T  17103144 cttccttcaaccatgcagtctcatacctgtacggcctcaggatctctctcattccgatg 17103086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 253 - 379
Target Start/End: Original strand, 8080373 - 8080499
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| || ||  ||||||||||||| ||||| |||||||| |||||||||||||| |||    
T  8080373 aaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttatcagctttccttcaaccatgtagtcccatacctacacggcttcaggatccctc 8080472  T
Q  353 tcattccgatgtgattcagttcgtcta 379  Q
    |||||||||||||||||||||| ||||    
T  8080473 tcattccgatgtgattcagttcctcta 8080499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 34308468 - 34308630
Alignment:
Q  209 caagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttc 308  Q
    |||||||| ||||  ||||||||||||| ||||| |   ||| |||||||| |||||| |||||||||||||||||| |||||| |||| ||||| ||||    
T  34308468 caagcacgcttaagtgtggagttcttatggaataggc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacagttcttataagccttc 34308565  T
Q  309 cttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||| |||||||||| | |||||| |||||||| || |||||||||||||||||||||    
T  34308566 cttcaaccatacagtctcatacttgtacggcctcaggatccctttcattccgatgtgattcagtt 34308630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 373
Target Start/End: Original strand, 22840560 - 22840680
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||| ||||| ||||||||||| |||||||||| ||| ||||| |||||||||||||| |  || ||||||||||||    
T  22840560 aaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagtcttcattcgaccatgtagtctcatacctacaaagcctcaggatctctc 22840659  T
Q  353 tcattccgatgtgattcagtt 373  Q
    |||||||||||||||||||||    
T  22840660 tcattccgatgtgattcagtt 22840680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 25147697 - 25147531
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   |||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||| | ||||||||||| |||||     
T  25147697 aagtcaagcacgattaactatggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagcaccaaacaattcttataagc 25147600  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  ||||||||||||| || |  | |||||||||||||||||||||||||| ||||    
T  25147599 cttccttcaaccatgcagtctcatacctacacagtcttaggatctctctcattccgatgtgatttagtt 25147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 27022323 - 27022485
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   | | ||||| || ||||||||||||||||||||||||| ||||||||||| |||||     
T  27022323 aagtcaagcacgcttaactgtggagttcttatggaatgagc--tgccgaaaataagatgcatgttgttgatataggtagtaccaaacaattcttataagc 27022420  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||| ||||||||| ||||| |||||||| | ||| ||| |||| ||||||||||||||||||||    
T  27022421 cttctttcaaccatgtagtcccatacctacatggcctcaagatccctctcattccgatgtgattc 27022485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 373
Target Start/End: Original strand, 34308924 - 34309090
Alignment:
Q  209 caagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatat----aggtagtatcaaacaattctcataagt 304  Q
    |||||||| ||||  ||||||||||||| ||||| |   ||| |||||||| |||||| ||||||||||    |||||||| |||||| |||| |||||     
T  34308924 caagcacgcttaactgtggagttcttatggaataggc--taccgaaaagaagatgcatcttgttgatatatataggtagtaccaaacagttcttataagc 34309021  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||| |||||||||| | |||||| |||||||| ||||||||||||||||||||||||    
T  34309022 cttccttcaaccatacagtctcatacttgtacggcctcaggatccctctcattccgatgtgattcagtt 34309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 388
Target Start/End: Complemental strand, 10845043 - 10844863
Alignment:
Q  206 agtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtc 305  Q
    ||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||      
T  10845043 agtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagct 10844946  T
Q  306 ttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  10844945 ttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 10844863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 379
Target Start/End: Original strand, 12827239 - 12827411
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  12827239 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 12827336  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
    |||||||||||||  ||||| |||||||| | ||| |||||||| |||||||||||  ||||||| |||| ||||    
T  12827337 cttccttcaaccaagtagtcccatacctacaaggcctcaggatccctctcattccggcgtgattcggttcttcta 12827411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 29971450 - 29971561
Alignment:
Q  271 ttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| ||||||||  ||  |||| |||||||||||    
T  29971450 ttgatatagatagtatcaaacaattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcaggatccttccaattctgatgtgattca 29971549  T
Q  371 gttcgtctaaaa 382  Q
    ||||||||||||    
T  29971550 gttcgtctaaaa 29971561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 41659135 - 41659272
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||  ||| | |||||| | ||    
T  41659135 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtcccatacctgcacgacatcaggaaccct 41659234  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||| |||||||| |||| |||| ||| |||||    
T  41659235 ctcattccggtgtgattcggttcctctagaagctgtcg 41659272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 22026540 - 22026359
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  22026540 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 22026443  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||| |||||||||  |||| |||||||  ||||| ||| || | ||||||||||| |||||||| |||| |||| ||| ||||    
T  22026442 cttcattcaaccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtgtgattcggttcctctagaagctgtc 22026359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 22548980 - 22549161
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||| |||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  22548980 aagtcaagcacgcttaactgtggagtttttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagt 22549077  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  || || ||||||   ||||||||||| |||||||| |||| |||| ||| ||||    
T  22549078 cttccttcaaccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtgtgattcggttcctctagaagctgtc 22549161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 27926060 - 27925879
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||      
T  27926060 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatc 27925963  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  27925962 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtc 27925879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 6464895 - 6465057
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||| |||| |||| ||   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  6464895 aagtcaagcacgcttaactgtggagttgttatggaatgagc--taccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagc 6464992  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||||||||| ||||  |||||||| ||||| ||| |||  |||||||||| |||||||||    
T  6464993 cttccttcaaccatgtagttccatacctacacggcctcatgattcctctcattccaatgtgattc 6465057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 25148128 - 25147962
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| ||||||||||||||| |||||||||||||||  | ||||||||||| |||||     
T  25148128 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagc 25148031  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||| | | |||| |||||||| ||| | || ||||| |||||||||  |||||||||||||    
T  25148030 cttccttcaacgacacagtcccatacctacacgacctcgggatccctctcattcttatgtgattcagtt 25147962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 389
Target Start/End: Complemental strand, 28453452 - 28453318
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctct 353  Q
    |||||| |||||| ||||| ||||||||||||| |||||||||| |||||| ||| |||||||||  ||||||||||||  ||| | || ||||| ||||    
T  28453452 aaagaagatgcatcttgttaatataggtagtataaaacaattcttataagttttctttcaaccatgaagtctcatacctgcacgacctcgggatccctct 28453353  T
Q  354 cattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||| |||||||||| || ||||||||||||||    
T  28453352 cattccggtgtgattcag-tcatctaaaagttgtcg 28453318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 33852243 - 33852410
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| ||| ||||||||| ||||  |   |||  ||||||| || ||| ||||| |||||||||||| ||||||||||| ||||||    
T  33852243 aagtcaagcacgcttaattgtgaagttcttatggaatgggc--taccaaaaagaagatacatcttgttaatataggtagtaccaaacaattcttataagt 33852340  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttc 374  Q
     |||||||||||||| ||||||||||||  ||||  || ||||| ||||||||| | |||||||||||||    
T  33852341 tttccttcaaccatacagtctcatacctgcacggtctcgggatccctctcattctggtgtgattcagttc 33852410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 373
Target Start/End: Complemental strand, 12100807 - 12100687
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| || ||||||||||||||| ||||||| ||| |||||  | |||||||||||  |||||||||||| |||||| ||||||||| |    
T  12100807 gaaaagaagatgcatcttattgatataggtagtaccaaacaaatcttataagcttgccttcaaccatgcagtctcatacctgtacggcctcaggatct-t 12100709  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    |||||| |||||||||||||||    
T  12100708 ctcatttcgatgtgattcagtt 12100687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 28375084 - 28375221
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||| ||||||||| ||||||||||| ||||| |||||||||| |||  ||||||||||||  ||||| |||||||| ||    
T  28375084 gaaaagaagatgcatcttgttgatgtaggtagtaccaaacaattcttataagccttccttcaatcatgcagtctcatacctgcacggcctcaggatccct 28375183  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||  | ||||||||  |||||||| ||| |||||    
T  28375184 ctcattatggtgtgattcgtttcgtctagaagctgtcg 28375221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 368
Target Start/End: Original strand, 22548534 - 22548695
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||| |||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||      
T  22548534 aagtcaagcacgcttaactgtggagttattatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaaa 22548631  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgatt 368  Q
    ||||||||||||||  |||| |||||||  || || |||||| | ||||||||||| |||||||    
T  22548632 cttccttcaaccatgcagtcacatacctgcacagcctcaggaaccctctcattccggtgtgatt 22548695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 27021909 - 27022050
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||  ||||| ||||||| | ||| |||||||| ||    
T  27021909 gaaaagaagatgcatcttgttgatataagtagtaccaaacaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccct 27022008  T
Q  352 c----tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |    ||||||||||||||||| | || |||| |||||||||    
T  27022009 ctcattcattccgatgtgattcggctcctctagaagttgtcg 27022050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 359
Target Start/End: Complemental strand, 22705279 - 22705181
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattcc 359  Q
    |||||| |||||||||||||||||| ||||||||||| ||||  |||||||||| |||  |||| |||||||| |||||||||||||| ||||||||||    
T  22705279 atgcatcttgttgatataggtagtaccaaacaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcattcc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 27819275 - 27819393
Alignment:
Q  251 tgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctc 350  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||| || || ||||||||||||||  |||||||||| |  | | ||||| |||| |    
T  27819275 tgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttattagccttccttcaaccatgaagtctcatacttgcatgacttcatgatccc 27819374  T
Q  351 tctcattccgatgtgattc 369  Q
    |||||||| ||||||||||    
T  27819375 tctcattctgatgtgattc 27819393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 365
Target Start/End: Original strand, 10844600 - 10844758
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||| |||||||||||| ||||||| ||| |||||     
T  10844600 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttaatataggtagtaccaaacaactcttataagc 10844697  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtg 365  Q
    ||||||||||||||  |||| |||||||  | ||| |||||| | ||||||||||| ||||    
T  10844698 cttccttcaaccatgcagtcccatacctgcaaggcctcaggaaccctctcattccggtgtg 10844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 25144933 - 25144767
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||| |||||||||||||| ||||||||||| |||||     
T  25144933 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgctgatataggtagtaccaaacaattcttataagc 25144836  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    || ||||||| |||  | || |||||||  ||| | ||  |||||||||||||| ||||||||||||||    
T  25144835 ctgccttcaatcatgcaatcccatacctgcacgacctcgagatctctctcattctgatgtgattcagtt 25144767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 370
Target Start/End: Original strand, 21316135 - 21316257
Alignment:
Q  248 tactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggat 347  Q
    |||||||||||  |||||| |||||||||||||||||| |||||||||||  ||||   || || ||||||| ||||||||||||  ||||| | |||||    
T  21316135 tactgaaaagacgatgcatcttgttgatataggtagtaccaaacaattcttttaagcgctcatttaaccatacagtctcatacctgcacggccttaggat 21316234  T
Q  348 ctctctcattccgatgtgattca 370  Q
    | |||||||  ||||||||||||    
T  21316235 ccctctcatcgcgatgtgattca 21316257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 379
Target Start/End: Complemental strand, 32292512 - 32292386
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||  |||||||||||| ||||| ||||||||||| |||||  |||||||||||||  |||| ||||| |  ||||| |||||| | |||    
T  32292512 aaaagaagatgcaacttgttgatatagatagtaccaaacaattcttataagcattccttcaaccatgcagtcccatacttgcacggcctcaggaaccctc 32292413  T
Q  353 tcattccgatgtgattcagttcgtcta 379  Q
    |||||||| |||||||| |||| ||||    
T  32292412 tcattccggtgtgattcggttcctcta 32292386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 3744753 - 3744673
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcataccta 333  Q
    |||||||  ||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||  |||| ||||||||    
T  3744753 aaaagaaggtgcatattgttggtataggtagtgtcaaacaattcttataagtcttccttcaaccatgcagtcccataccta 3744673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 30334938 - 30335055
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| ||| || |||||| ||||||||||||||||||||| | |||||||||| ||||||| |  |||| |||||||  || |  ||||||||  |    
T  30334938 gaaaagaagatgtatcttgttggtataggtagtatcaaacaatttttataagtcttctttcaaccttgcagtcgcatacctgcacagtctcaggatccat 30335037  T
Q  352 ctcattccgatgtgattc 369  Q
    || |||||||||||||||    
T  30335038 ctaattccgatgtgattc 30335055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 332
Target Start/End: Complemental strand, 1297123 - 1297043
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    |||||||||||  || |||||| ||||||||||| ||||||||||| |||||| || ||||||||||  ||||||||||||    
T  1297123 gaaaagaatataaatcttgttggtataggtagtaccaaacaattcttataagttttacttcaaccatgcagtctcatacct 1297043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 373
Target Start/End: Original strand, 15567587 - 15567707
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| ||| || |||||| |||| ||||| |||||||||||| ||||| |||||||| |||||   |||| |||| |   ||   ||| ||||||||    
T  15567587 aaaagaagatgtatcttgttggtatatgtagtgtcaaacaattcttataagccttccttccaccatgatgtctaatacttgcgcgatgtcaagatctctc 15567686  T
Q  353 tcattccgatgtgattcagtt 373  Q
    |||||||||||||||||||||    
T  15567687 tcattccgatgtgattcagtt 15567707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 17429600 - 17429501
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||| ||  |||| ||||  |  ||||  ||| |||| ||||||||||||||||||    
T  17429600 ttgttgatataggtagtaccaaataatactcataagtcttccttcaacaatgcagtcacatatatgcacggtctcaagatc-ctctcattccgatgtgat 17429502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 3745216 - 3745145
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtc 324  Q
    ||||||| |||||| |||||| |||||||||||  ||||| |||| |||||| ||||||||||||| |||||    
T  3745216 aaaagaagatgcatattgttggtataggtagtactaaacagttcttataagttttccttcaaccatgtagtc 3745145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 15568044 - 15568139
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcat 356  Q
    |||||| ||||||||||||||  || ||||||||| | |||||||||||||||||||   |||| ||||  | |||||  ||||||||||||||||    
T  15568044 atgcatcttgttgatataggtcataccaaacaattgttataagtcttccttcaaccaagaagtcacatatttgtacggtctcaggatctctctcat 15568139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 25307828 - 25307741
Alignment:
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcgaaa 392  Q
    ||||||||||||||| ||||||||||||  ||||| |  | ||| ||||||||||  |||||||||||| |||| |||| ||||||||    
T  25307828 cttccttcaaccatacagtctcatacctgcacggccttggaatcgctctcattccagtgtgattcagtttgtctcaaagctgtcgaaa 25307741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 330
Target Start/End: Original strand, 36968433 - 36968503
Alignment:
Q  260 tatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatac 330  Q
    ||||||| ||||||||||| |||| | ||| ||||||| ||||||| ||||||||||||| ||| ||||||    
T  36968433 tatgcatcttgttgatataagtagcaccaatcaattcttataagtcatccttcaaccatacagtttcatac 36968503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 41913085 - 41913006
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    ||||||| | |||| |||||||||||||||| | ||||||||||| ||||| |||| ||||| |||  |||| |||||||    
T  41913085 aaaagaagacgcatcttgttgatataggtagcaccaaacaattcttataagccttctttcaaacatgcagtcccatacct 41913006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 15819045 - 15819121
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcat 328  Q
    |||||||| ||||||  |||||||||| |||||| ||||||||| |  ||||  ||||||||||||| | |||||||    
T  15819045 gaaaagaagatgcatcatgttgatatatgtagtaccaaacaatttttctaagcattccttcaaccatgttgtctcat 15819121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 205 - 387
Target Start/End: Original strand, 10927388 - 10927568
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||||||||  ||||||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  10927388 aagtcaagcacgtttaactgtggagttcttatggaatgggc--taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 10927485  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgt 387  Q
    |||||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||||||||| |||| |||| |||||||    
T  10927486 cttccttcaaccatgtagtctcatacctacacggcctcaagatccctctcattccgatgtgattcggttcctctataagttgt 10927568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 3887042 - 3887208
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||| ||||||||| |||| ||  |||| |||||||| |||||| |||||||||||||||||| |||| |||||  ||||||    
T  3887042 aagtcaagcacgcttaactgtgaagttcttatggaatgag--ttaccgaaaagaagatgcatcttgttgatataggtagtaccaaataattcatataagt 3887139  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  3887140 cttccttcaaccatgcagtcccatacctgtacggcctcaggatcactctcattccgatgtgattcagtt 3887208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 205 - 390
Target Start/End: Original strand, 42788631 - 42788814
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||| | |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  42788631 aagtcaagcacgcttaactgtggagttcttgtggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagt 42788728  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcga 390  Q
    |||| ||||||||| ||||| ||  |||| ||||| |||||||| ||||||||||| |||||||| |||| |||| ||||||||||    
T  42788729 cttctttcaaccatgtagtcccaatcctacacggcctcaggatccctctcattccgttgtgattcggttcctctagaagttgtcga 42788814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 2474566 - 2474400
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| |||||||||||  |||||    
T  2474566 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagt 2474469  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| |||| || |||| | | |||||||||||||||||||||||||||||||    
T  2474468 cttccttcaaccatgcagtcccatatctgtacgaccttaggatctctctcattccgatgtgattcagtt 2474400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 10926931 - 10927113
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||||||||  ||||||||||||| ||||  | | |||  ||| ||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  10926931 aagtcaagcacgtttaactgtggagttcttatggaat--ggactaccaaaaggaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 10927028  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||| |||||||||| |||| |||| ||| |||||    
T  10927029 cttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattctgatgtgattcggttcctctataagctgtcg 10927113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 39147100 - 39146919
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| ||||| ||||| |||||||||||||||||| ||||||    
T  39147100 aagtcaagcacgcttaactgtggagttcttatggaatgggc--taccaaaaagaagatgcatcttgttaatataagtagtatcaaacaattcttataagt 39147003  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    || ||||||||||| ||||| |||||||| ||||| ||| |||| |||||||| |||||||||||||||| |||| ||||||||    
T  39147002 ctaccttcaaccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgtgattcagttcctctagaagttgtc 39146919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 205 - 387
Target Start/End: Original strand, 17445440 - 17445620
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||| ||||||| |||| ||   ||| || ||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  17445440 aagtcaagcacgcttaactgtggatttcttatggaatgagc--taccgataagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 17445537  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgt 387  Q
    |||||||||||||| ||||| ||| |||| ||||| |||||||| |||||||| ||||||||||| |||| |||| |||||||    
T  17445538 cttccttcaaccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatgtgattcggttcctctagaagttgt 17445620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 189229 - 189063
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||| | ||||  ||||||||||||| |||| ||   ||| |||||||| || ||| |||||||||||||||||| ||||||||||| |||||     
T  189229 aagtcaagcatgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatacatcttgttgatataggtagtaccaaacaattcttataagc 189132  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||| | |||||| |||||||| ||||||||||||||||||||||||    
T  189131 cttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccgatgtgattcagtt 189063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 2474120 - 2473954
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||||||||||| |||| ||||||||||| |||||     
T  2474120 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggcagtaccaaacaattcttataagc 2474023  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||||||| ||| |||| | | |||||| ||||||||||||||||||||||||    
T  2474022 cttccttcaaccatgcagtctcatgcctgtacgaccttaggatccctctcattccgatgtgattcagtt 2473954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 189 - 370
Target Start/End: Original strand, 8642003 - 8642182
Alignment:
Q  189 atcttaaaactgttctaagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatca 288  Q
    ||||||||| || || |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||    
T  8642003 atcttaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacca 8642100  T
Q  289 aacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    || |||||| ||||| ||||||||||||||  |||| |||||||  ||||| | |||||| ||||||||| |||||||||||    
T  8642101 aataattcttataagccttccttcaaccatgcagtcccatacctgcacggccttaggatccctctcattctgatgtgattca 8642182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 2193977 - 2193795
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  2193977 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 2193880  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| ||||| |||||||| | ||| ||| |||| |||||||||||  ||||||| |||| |||| ||| |||||    
T  2193879 cttccttcaaccatgtagtcccatacctacaaggcctcatgatccctctcattccggcgtgattcggttcctctagaagctgtcg 2193795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 20039505 - 20039641
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||| || |||||  ||||||| ||||| ||| |||| |||    
T  20039505 aaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaactatgtagtcctatacctacacggcctcatgatccctc 20039604  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||||| ||| ||||| ||| |||||    
T  20039605 tcattccgatgtgattcggtttgtctagaagctgtcg 20039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 252 - 383
Target Start/End: Complemental strand, 42429261 - 42429131
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| |||||||||||| |  || |||||||| ||||  |||||||| ||    
T  42429261 gaaaagaatatgcatattgttgataaaggtagtaccaaacaattcttataagtcctccttcaaccatgtgttcacatacctacacggtctcaggatc-ct 42429163  T
Q  352 ctcattccgatgtgattcagttcgtctaaaag 383  Q
    || ||||||||||||||| |||||||||||||    
T  42429162 cttattccgatgtgattcggttcgtctaaaag 42429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 8391307 - 8391468
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   |||||||||||| |||| ||   ||| |||||||| |||||| ||||||||| ||| |||| ||||||||||| ||||||    
T  8391307 aagtcaagcacgcttaactatggagttcttatggaattagc--taccgaaaagaagatgcatcttgttgatacagg-agtaccaaacaattcttataagt 8391403  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    |||||||||| ||| ||||||||| |||| ||||| |||| ||| ||||||||||||||||||||    
T  8391404 cttccttcaatcatgtagtctcatgcctacacggcctcagaatccctctcattccgatgtgattc 8391468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 382
Target Start/End: Original strand, 15512997 - 15513173
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataag- 303  Q
    |||||||||||||||||| ||||||||||||| |||| |||  |||  ||||||| |||||| |||||||||| ||||||| ||| ||||||| |||||     
T  15512997 aagtcaagcacgtttaattgtggagttcttatggaatgaga--taccaaaaagaagatgcatcttgttgatattggtagtaccaa-caattcttataagc 15513093  T
Q  304 -tcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaa 382  Q
     | ||||||||||||| ||||| |||||||| || || | | |||| |||||||||||||||||||| |||| |||||||    
T  15513094 atattccttcaaccatgtagtcccatacctacacagcctaatgatccctctcattccgatgtgattcggttcctctaaaa 15513173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 252 - 373
Target Start/End: Complemental strand, 22556652 - 22556531
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||    
T  22556652 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccct 22556553  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||||||||    
T  22556552 ctcattccgatgtgattcagtt 22556531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 27646866 - 27647002
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||| | |||||||| |||||   |||||| |||    
T  27646866 aaaagaagatgcatcttgttgttataggtagtaccaaacaattcttataagccttccttcaaccatgtagccccatacctacacggccctaggatccctc 27646965  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||||| |||| |||| ||| |||||    
T  27646966 tcattccgatgtgattcggttcctctagaagctgtcg 27647002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 388
Target Start/End: Complemental strand, 34867906 - 34867770
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| |||||| | ||    
T  34867906 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccct 34867807  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||| |||||||| |||| |||| ||| ||||    
T  34867806 ctcattccggtgtgattcggttcttctagaagctgtc 34867770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 205 - 370
Target Start/End: Complemental strand, 1822067 - 1821904
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  1822067 aagtcaagcacgcttaaatgtggagttcttatggaatgggc--taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 1821970  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    ||||||||||||||  ||||||||||||  ||| | | | |||||||||||||||||||| |||||    
T  1821969 cttccttcaaccatgcagtctcatacctgcacgaccttaagatctctctcattccgatgtaattca 1821904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 373
Target Start/End: Complemental strand, 22557085 - 22556964
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||| ||||||| ||||||||||  ||||| ||||||||||||||  |||| |||||||  ||||| ||| || ||||    
T  22557085 gaaaagaagatgcatcttgttgatattggtagtaccaaacaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaactct 22556986  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||||||||    
T  22556985 ctcattccgatgtgattcagtt 22556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 11160713 - 11160848
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctct 353  Q
    ||||||||||||| ||||||| |||| ||||| ||||||||| | ||||| ||||||||||| || |||| ||||||||| ||| ||||| |||| ||||    
T  11160713 aaagaatatgcatcttgttgacatagatagtaccaaacaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctct 11160812  T
Q  354 cattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||  |||| |||| ||||||| ||||||    
T  11160813 cattccgatgcaattcggttcatctaaaaattgtcg 11160848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 369
Target Start/End: Original strand, 2058690 - 2058803
Alignment:
Q  256 agaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctca 355  Q
    ||||| ||||| |||||||||||||||||| ||||||||||  |||||||||||||||| |||  ||||||||| ||  | | |||||||||||||||||    
T  2058690 agaatttgcatcttgttgatataggtagtaccaaacaattcatataagtcttccttcaatcatccagtctcatagctgcatgacttcaggatctctctca 2058789  T
Q  356 ttccgatgtgattc 369  Q
     |||||||||||||    
T  2058790 atccgatgtgattc 2058803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 370
Target Start/End: Original strand, 3886588 - 3886749
Alignment:
Q  207 gtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtct 306  Q
    ||||| |||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||  |||||  |    
T  3886588 gtcaaacacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcatataagcat 3886685  T
Q  307 tccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    |||||| |||||  |||| ||||| | |||| | |||||||| |||||||||||||||||||||    
T  3886686 tccttctaccatgcagtcccatacttgtacgacctcaggatccctctcattccgatgtgattca 3886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 373
Target Start/End: Original strand, 4658024 - 4658143
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||| |||| ||||| |||||||||  ||||||||||||  |||| |||| |||| |||    
T  4658024 aaaagaagatgcatgttgttgttataggtagtatcaaacaagtcttataa-tcttcgttcaaccatgaagtctcatacctgcacggtttcaagatccctc 4658122  T
Q  353 tcattccgatgtgattcagtt 373  Q
    | ||| |||||||||||||||    
T  4658123 ttatttcgatgtgattcagtt 4658143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 34371773 - 34371592
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||| |||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| |||||||||||  ||||     
T  34371773 aagtcaagcacgcttaactgtggtgttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagc 34371676  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
     |||||||||||||  |||| || |||| |||||| |  ||| | ||||||||||| |||||||| |||| |||| ||| ||||    
T  34371675 attccttcaaccatgcagtcccacacctgtacggccttgggaaccctctcattccggtgtgattcggttcctctagaagctgtc 34371592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 34372229 - 34372048
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||| ||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| |||||||||||  ||||     
T  34372229 aagtcaagcacgcttaactgtgaagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttttaagc 34372132  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
     ||||||||||||| ||||| ||||| | |||||| |  ||| | ||||||||| | |||||||| |||| |||| ||| ||||    
T  34372131 attccttcaaccatgtagtcccatacttgtacggccttgggaaccctctcattctggtgtgattcggttcctctagaagctgtc 34372048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 379
Target Start/End: Original strand, 21886176 - 21886303
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||  | |||||| | ||    
T  21886176 gaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacaacctcaggaaccct 21886275  T
Q  352 ctcattccgatgtgattcagttcgtcta 379  Q
    ||||||||| |||||||| |||| ||||    
T  21886276 ctcattccggtgtgattcggttcctcta 21886303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 386
Target Start/End: Original strand, 5066922 - 5067055
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||| || || ||||||||||| |||||| |||||| || |||| |||||||||| |  ||||| || |||||||||    
T  5066922 aaaagaaaatgcatcttgttgatatagataataccaaacaattcttataagttttcctttaatcatacagtctcatacatgcacggcctcgggatctctc 5067021  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttg 386  Q
    |||||| | ||||||||  || ||||| ||||||    
T  5067022 tcattctggtgtgattcgatttgtctagaagttg 5067055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 18304547 - 18304410
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    ||||||||||||||| |||||||||||||||||| |||||||||   |||||  || | ||| |||| ||||| |||||||| ||| | ||||||||  |    
T  18304547 gaaaagaatatgcatcttgttgatataggtagtaccaaacaatttatataagcttttcatcatccatgtagtcccatacctacacgacctcaggatcctt 18304448  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||| |||||||  ||||||||| ||| |||||    
T  18304447 ctcattccgttgtgatttggttcgtctagaagctgtcg 18304410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 366
Target Start/End: Original strand, 16370754 - 16370852
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtga 366  Q
    ||||||||||| |||||| ||||||||||| |||||| |||||||||||||  ||||| ||||||| | ||| |||||| | |||||||| ||||||||    
T  16370754 ttgttgatataagtagtaccaaacaattcttataagttttccttcaaccatgcagtcttatacctacatggcatcaggaaccctctcatttcgatgtga 16370852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 354
Target Start/End: Original strand, 18750181 - 18750328
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||| ||| |||||  |||||||||||| |||||||   ||| |||||||| |||||| || ||| ||||||||||| ||||||||| | ||||      
T  18750181 aagtcaagtacgattaattatggagttcttatggaataagc--taccgaaaagaagatgcatctttttggtataggtagtaccaaacaattgttataatc 18750278  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctc 354  Q
    ||||||||||||||  |||  || ||||  ||| ||||||||||||||||    
T  18750279 cttccttcaaccatgcagttccaaacctgcacgacttcaggatctctctc 18750328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 22975076 - 22975161
Alignment:
Q  288 aaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |||||||||| |||||  || ||||||||||  |||| |||||||  ||||| |||||||| ||||||||||||||||||||||||    
T  22975076 aaacaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccgatgtgattcagtt 22975161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 24182277 - 24182353
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatac 330  Q
    |||||| |||||| |||||| ||||| ||||| |||| |||||| ||||| |||||||||||||| | |||||||||    
T  24182277 aaagaagatgcatcttgttggtatagatagtaccaaataattcttataagccttccttcaaccatttcgtctcatac 24182353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 29680177 - 29680236
Alignment:
Q  299 ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattc 358  Q
    ||||| |||||||||||||| ||||| |||||||| ||||| ||| ||||||||||||||    
T  29680177 ataagccttccttcaaccatgtagtcccatacctacacggcctcaagatctctctcattc 29680236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 5549460 - 5549339
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctc-ataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||||  ||| |||||| |||| |||||| ||||||||| |  |||||| |||||||||  ||| | ||||||||||| | || |||| || |  |    
T  5549460 aaaagaataaacatattgttggtatacgtagtaccaaacaattttttataagttttccttcaattatacaatctcatacctacatggtttcatgaaccat 5549361  T
Q  352 ctcattccgatgtgattcagtt 373  Q
    ||||||||||||||||||||||    
T  5549360 ctcattccgatgtgattcagtt 5549339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 30719835 - 30719952
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||  ||||||||||| ||||||||||  ||||| ||||||||||| ||   ||| ||||| |  ||  | |||||||| ||    
T  30719835 gaaaagaagatgcatcttgtttttataggtagtaccaaacaattcatataagccttccttcaacaatgatgtcccatacttgcacaacctcaggatccct 30719934  T
Q  352 ctcattccgatgtgattc 369  Q
    ||||||| ||||||||||    
T  30719935 ctcattctgatgtgattc 30719952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 323
Target Start/End: Original strand, 4673475 - 4673572
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||||||||| ||||  ||| |||  |||||||||||||| ||||||||| ||||  || |||| |||||| ||||| |||||||||| ||| ||||    
T  4673475 gtggagttcttatggaat--gaaataccaaaaagaatatgcatcttgttgatacaggtgctaccaaataattcttataagacttccttcaatcatgtagt 4673572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 11757265 - 11757344
Alignment:
Q  204 taagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagta 285  Q
    ||||||||||||| ||||  ||||||||||||| || |  ||| ||| |||||||| |||||| ||||||||||| ||||||    
T  11757265 taagtcaagcacgcttaactgtggagttcttatggatt--gaactaccgaaaagaagatgcattttgttgatataagtagta 11757344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 39801501 - 39801571
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctca-taagtcttccttcaaccatatagtctcatac 330  Q
    |||||| |||||||||||||||||| ||||| ||| | |  |||||||| || ||||||||||||||||||    
T  39801501 atgcatcttgttgatataggtagtaccaaacgatttttagaaagtcttcttttaaccatatagtctcatac 39801571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 2903 - 2721
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| ||||||||||||||| |||||||||||||||||| | ||||||||| |||||     
T  2903 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaatatgcatcttgttgatataggtagtacccaacaattcttataagc 2806  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| ||||| |||||||| ||||| |||||||| |||||||| |||||||||||  ||| |||| |||||||||    
T  2805 cttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgtgattcgattcctctagaagttgtcg 2721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 18120 - 18301
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||  |||| || |||||| |||||||||||||||||||||||||||||| ||||||    
T  18120 aagtcaagcacgcttaactgtggagttcttatggaattagc--taccaaaaa-aagatgcatcttgttgatataggtagtatcaaacaattcttataagt 18216  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||| || ||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| |||| ||| |||||    
T  18217 cttccttcaactatgtagtcacatacctacacggcctcaggatccctctcattccgatgtgattcagttcctctagaagctgtcg 18301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 17645 - 17765
Alignment:
Q  269 tgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgatt 368  Q
    ||||||||||||||||| ||||||||||| |||||  ||||||||||||| ||||| |||||||| ||||| |||||||| ||||||||| ||||| |||    
T  17645 tgttgatataggtagtaccaaacaattcttataagctttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattctgatgtcatt 17744  T
Q  369 cagttcgtctaaaagttgtcg 389  Q
    | |||| || | |||||||||    
T  17745 cggttcctcaagaagttgtcg 17765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 205 - 372
Target Start/End: Complemental strand, 41472461 - 41472297
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||||||||||||| |||||||||||||| ||||  ||  ||| |||||||| |||||| ||||||||||| |||||| ||||||||||| |||||     
T  41472461 aagtcaagcacgtttaaccgtggagttcttatggaat--gatctaccgaaaagaagatgcatcttgttgatatatgtagtaccaaacaattcttataag- 41472365  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagt 372  Q
    ||||||||||||||  |||||||||||| |||| | |||||||| |||||||||||||||||||||||    
T  41472364 cttccttcaaccatgcagtctcatacctgtacgacctcaggatccctctcattccgatgtgattcagt 41472297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 20885102 - 20885283
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| ||||||||||||| ||||  |   |||| ||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  20885102 aagtcaagcacgcttaattgtggagttcttatggaatgtgc--tactaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcttataagt 20885199  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| ||||| |||||||| ||| | ||| |||| |||||||| ||||||||||  |||| |||| |||||||||    
T  20885200 cttccttcaaccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgtgatt-ggttcctctagaagttgtcg 20885283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 39641098 - 39640916
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    ||||||| |||| ||||  ||||||||||||| |||| ||   |||  ||||||| |||||| || ||||||||||||||| ||||||| ||| ||||||    
T  39641098 aagtcaaacacgcttaactgtggagttcttatggaatgagc--taccaaaaagaagatgcatcttattgatataggtagtaccaaacaactcttataagt 39641001  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||  ||| |||||||| |||||    
T  39641000 cttccttcaaccatgtagtctcatacctacacggcctcaggatctctctcattctgatgtgattcgattcttctaaaagctgtcg 39640916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 28561907 - 28561726
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  28561907 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 28561810  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  ||||| |||||| | ||||||||||| ||||||||||||| |||| ||||||||    
T  28561809 cttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcagttcctctagaagttgtc 28561726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 389
Target Start/End: Complemental strand, 30529802 - 30529666
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| |||| |||||| ||||| ||| |||||||||| |||||||||||||| || || |||||||| |||    
T  30529802 aaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggatccctc 30529703  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||||||||||| |||| |||||||||    
T  30529702 tcattccgatgtgattcagttcctctagaagttgtcg 30529666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 31284261 - 31284427
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  31284261 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 31284358  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| |||||||  ||| | ||| |||| ||||||||||||||||||||||||    
T  31284359 cttccttcaaccatgcagtcccatacctgcacgacctcaagatccctctcattccgatgtgattcagtt 31284427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 205 - 390
Target Start/End: Original strand, 13150084 - 13150267
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||||||||||| |||||| ||||||||| |||||||| | ||||||||| |||||     
T  13150084 aagtcaagcacgcttaactgtggagttcttatggaatgagc--tactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagc 13150181  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcga 390  Q
    |||||||||||||| ||||| |||||||| | ||| |||||| | |||||||||||  ||||||| |||| |||| ||| ||||||    
T  13150182 cttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcga 13150267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 25230690 - 25230872
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| || |||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| ||||      
T  25230690 aagtcaagcacgcttaattgttgagttcttatggaatgggc--taccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaac 25230787  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| |||||||||||||| | ||| |||||||| |||||||||| ||||||||  |||| |||| ||| |||||    
T  25230788 cttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcg 25230872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 25238277 - 25238459
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| || |||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||| ||||||||||| ||||      
T  25238277 aagtcaagcacgcttaattgttgagttcttatggaatgggc--taccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttataaac 25238374  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| |||||||||||||| | ||| |||||||| |||||||||| ||||||||  |||| |||| ||| |||||    
T  25238375 cttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcg 25238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 369
Target Start/End: Complemental strand, 16811542 - 16811380
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||| ||||||| |||| ||   ||| |||||||| |||||| ||||||| |||||||||| | ||||||||| |||||     
T  16811542 aagtcaagcacgcttaactgtggaattcttatggaatgagc--taccgaaaagaagatgcatcttgttgaaataggtagtacccaacaattcttataagc 16811445  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    ||||||||||||||  |||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  16811444 cttccttcaaccatggagtcccaaacctacacggcctcaggatccctctcattccgatgtgattc 16811380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 50347907 - 50347725
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||  ||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  50347907 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccaaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 50347810  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||  ||||||||||| || | ||| |||||||| |||||||||||  ||||||| |||| |||| ||| |||||    
T  50347809 cttccttcaaccaagtagtctcatacatacaaggcctcaggatccctctcattccggcgtgattcggttcctctagaagctgtcg 50347725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 7493997 - 7493881
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||| |||| |||||| ||||| ||||||||||||||  ||||||||||||  ||| ||| |||||||||    
T  7493997 gaaaagaagatgcatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatctct 7493898  T
Q  352 ctcattccgatgtgatt 368  Q
    |||||||||||||||||    
T  7493897 ctcattccgatgtgatt 7493881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 360
Target Start/End: Original strand, 11180019 - 11180172
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  11180019 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 11180116  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||||||||||| ||||| |||||||| | ||| |||||||| |||||||||||    
T  11180117 cttccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccg 11180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 388
Target Start/End: Complemental strand, 39653280 - 39653144
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||| |||||  |||||||||||||  |||| |||||||  ||||| |||||| | ||    
T  39653280 gaaaagaagatgcatcttgttgatataggtagtatccaacaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccct 39653181  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||| ||||||||||||| |||| ||| ||||    
T  39653180 ctcattccggtgtgattcagttcctctagaagctgtc 39653144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 14814110 - 14813938
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||  ||   ||| |||||||| |||||| || ||||||||||||||| ||||||||| | |||||     
T  14814110 aagtcaagcacgcttaactgtggagttcttatggaacgagc--taccgaaaagaagatgcatcttattgatataggtagtaccaaacaattattataagc 14814013  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
    ||||||| ||||||  ||||||||||||| ||||| |||||| | ||||||||||| |||||||| |||| ||||    
T  14814012 cttcctttaaccatgcagtctcatacctacacggcctcaggaaccctctcattccggtgtgattcggttcctcta 14813938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 25230279 - 25230415
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| ||| || |||||||||||||||||| |||| |||||| ||||| |||||||||||||| ||||| |||||||| ||| | |||||||| |||    
T  25230279 aaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctc 25230378  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    || |||||||||||||  |||| |||| ||| |||||    
T  25230379 tccttccgatgtgatttggttcctctataagatgtcg 25230415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 25237866 - 25238002
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| ||| || |||||||||||||||||| |||| |||||| ||||| |||||||||||||| ||||| |||||||| ||| | |||||||| |||    
T  25237866 aaaagaagatgtatcttgttgatataggtagtaccaaataattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctc 25237965  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    || |||||||||||||  |||| |||| ||| |||||    
T  25237966 tccttccgatgtgatttggttcctctataagatgtcg 25238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 32386719 - 32386844
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||||||||||| |||||| ||||| |||||||||||| ||||||||||| |||||     
T  32386719 aagtcaagcacgcttaactgtggagttcttatggaattagc--tactgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagc 32386816  T
Q  305 cttccttcaaccatatagtctcatacct 332  Q
    ||||||||||||||| |||| |||||||    
T  32386817 cttccttcaaccatacagtcccatacct 32386844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 32796966 - 32797082
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||| ||||||||| | ||  |||||||| |||    
T  32796966 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttgcttcaaccatgtagtttcatacctacatggtctcaggatccctc 32797065  T
Q  353 tcattccgatgtgattc 369  Q
    | ||| |||||||||||    
T  32797066 ttatttcgatgtgattc 32797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 387
Target Start/End: Original strand, 32227206 - 32227386
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   |||  ||||||| |||||| ||||| |||||||||||| | ||||||||| |||||     
T  32227206 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccaaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagc 32227303  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgt 387  Q
    |||||||||||||| ||||| |||||||| | ||| | |||||| |||||||||||  ||||||| |||| |||| |||||||    
T  32227304 cttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgattcggttcctctagaagttgt 32227386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 32227661 - 32227480
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| |||||| ||||| |||||||||||| | ||||||||| |||||     
T  32227661 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgcatcttgttaatataggtagtacccaacaattcttataagc 32227564  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||| ||||| |||||||| | ||| ||| |||| |||||||||||  ||||||| |||| |||| ||| |||||    
T  32227563 cttccttcaaccatgtagtcccatacctacaaggcctca-gatccctctcattccggcgtgattcggttcctctagaagctgtcg 32227480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 37045196 - 37045014
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||| |   |||  ||||||| |||||  ||||||||||||||| || ||||||||||| |||||     
T  37045196 aagtcaagcacgcttaactgtggagttcttatggaataggg--taccaaaaagaagatgcaccttgttgatataggtattaccaaacaattcttataagc 37045099  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
     ||||||||  ||| ||||| || ||||| ||||| |||||||| ||||||||| |||||||||| |||| |||| ||| |||||    
T  37045098 attccttcattcatgtagtcccacacctacacggcctcaggatccctctcattcagatgtgattcggttcctctagaagctgtcg 37045014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 368
Target Start/End: Complemental strand, 7477307 - 7477191
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| ||| || ||||||||||| |||||| |||| |||||| ||||| ||||||||||||||  ||||||||||||  ||| ||| |||||| ||    
T  7477307 gaaaagaagatgtatcttgttgatataagtagtaccaaaaaattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatccct 7477208  T
Q  352 ctcattccgatgtgatt 368  Q
    |||||||||||||||||    
T  7477207 ctcattccgatgtgatt 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 25239108 - 25239224
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| |||| |||||| |||||  ||||||||||||||||||| |||||||| ||| | |||| ||| |||    
T  25239108 aaaagaagatgcatcttgttgatataggtagtaccaaaaaattcttataagcgttccttcaaccatatagtcccatacctacacgacctcagaatccctc 25239207  T
Q  353 tcattccgatgtgattc 369  Q
    |||| ||| ||||||||    
T  25239208 tcataccggtgtgattc 25239224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 2911256 - 2911084
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||  |||||||||||||| ||||||||||||||| |||||||||||| | ||||      
T  2911256 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccaaaaagaatatgcatcttgttgatataggtaatatcaaacaatttttataacc 2911159  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
     ||| ||||||||| | ||| |||||||  ||||| || ||||| ||||||||| | |||||||| |||||||||    
T  2911158 attctttcaaccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtgtgattcggttcgtcta 2911084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 41474112 - 41473993
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||||||  || ||||||||||||| |||||||||||||||| ||||||||||||| ||||||  |||| |||||||  ||| | ||| |||| |||    
T  41474112 aaaagaatatcaatcttgttgatataggaagtatcaaacaattcttataagtcttcctttaaccatccagtcacatacctgaacgacctcaagatccctc 41474013  T
Q  353 tcattccgatgtgattcagt 372  Q
    ||||| ||||||||||||||    
T  41474012 tcatttcgatgtgattcagt 41473993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 13150539 - 13150657
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  13150539 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 13150636  T
Q  305 cttccttcaaccatatagtct 325  Q
    |||||||||||||| ||||||    
T  13150637 cttccttcaaccatgtagtct 13150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 25248226 - 25248106
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||   |||||| ||||||  |||| |||||||  ||||| | || ||| |||    
T  25248226 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattcctttaaccatgcagtcccatacctgcacggccttagaatccctc 25248127  T
Q  353 tcattccgatgtgattcagtt 373  Q
    |||||||||||||||||||||    
T  25248126 tcattccgatgtgattcagtt 25248106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 370
Target Start/End: Complemental strand, 8067441 - 8067278
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   |||||||||||| |||| ||   ||| ||||| || |||||| ||||||||||||||||||  |||||||||| |||||     
T  8067441 aagtcaagcacgcttaactatggagttcttatggaatgagc--taccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagc 8067344  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    |  |||||||||||  | || |||||||  ||||| ||||| || |||||||||||||||||||||    
T  8067343 cggccttcaaccatgcaatcccatacctgcacggcctcagggtccctctcattccgatgtgattca 8067278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 25238669 - 25238790
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| ||||||||| || ||||| ||||||||||| ||||||    
T  25238669 aagtcaagcacgcttaactgtggagttcttatggaatgggc--taccaaaaagaagatgcatcttgttgataaagatagtaccaaacaattcttataagt 25238766  T
Q  305 cttccttcaaccatatagtctcat 328  Q
    |||||||||||||| |||||||||    
T  25238767 cttccttcaaccatgtagtctcat 25238790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 27187315 - 27187478
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| |||||| ||  |||||||||||||| ||||||||||| |||||     
T  27187315 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgcatcttagtgatataggtagtaccaaacaattcttataagc 27187412  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattca 370  Q
    |||| || ||||||  |||| ||||| |  || || |||||||| |||||||||| ||||||||||    
T  27187413 cttcatttaaccatgcagtcccatacatgcacagcctcaggatccctctcattccaatgtgattca 27187478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 366
Target Start/End: Complemental strand, 29224440 - 29224326
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||  ||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||| ||| | ||| ||| || | ||    
T  29224440 gaaaagaagatgcatcttgttagtataggtagtaccaaacaattcttataagtcttccttcaaccatgcagtctcatatctacatggcctcatgaaccct 29224341  T
Q  352 ctcattccgatgtga 366  Q
     |||||| |||||||    
T  29224340 ttcattctgatgtga 29224326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 16811041 - 16810924
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||| ||||||| |||||   ||||||||| ||||| ||||| ||||||||  |||| |||| ||| ||||| ||| |||| ||    
T  16811041 gaaaagaagatgcatcttgtagatatagttagtacgcaacaattcttataagccttccatcaaccatgcagtcccatatctacacggcctcaagatccct 16810942  T
Q  352 ctcattccgatgtgattc 369  Q
    ||||||||||||||||||    
T  16810941 ctcattccgatgtgattc 16810924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 4067345 - 4067454
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   |||  ||||||| |||||| |||||||||||||||||| ||||||||| | ||||||    
T  4067345 aagtcaagcacgcttaactgtggagttcttatgtaatgagc--taccaaaaagaagatgcatcttgttgatataggtagtaccaaacaatttttataagt 4067442  T
Q  305 cttccttcaacc 316  Q
    ||||||||||||    
T  4067443 cttccttcaacc 4067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 194 - 388
Target Start/End: Complemental strand, 14820326 - 14820134
Alignment:
Q  194 aaaactgttctaagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaa 293  Q
    |||| ||||| |||||||||||| ||||  ||||||||||||| |||  ||   ||| ||||| || |||||| ||||||||||| |||||| |||||||    
T  14820326 aaaattgttccaagtcaagcacgcttaactgtggagttcttatggaacgagc--taccgaaaataagatgcatcttgttgatataagtagtaccaaacaa 14820229  T
Q  294 ttctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    |||| ||||| ||||||| | || |  || | |||||||| ||||  |||||| | |||||||| || |||||||| |||| |||| ||| ||||    
T  14820228 ttcttataagccttcctttagccgtgcagccccatacctacacgggctcaggaaccctctcattgcggtgtgattcggttcctctagaagctgtc 14820134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 409
Target Start/End: Original strand, 25803034 - 25803192
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| || ||| |||||  ||||||||||| ||||||||||| | ||||||| ||||||||||  |||| |||||||| ||| | | |||| | ||    
T  25803034 gaaaagaagatacatcttgtttttataggtagtaccaaacaattcttacaagtcttacttcaaccatgcagtcccatacctacacgacattaggaaccct 25803133  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcgaaagtc-ctcattgttatgcc 409  Q
    || |||||||| |||||| |||| |||| ||| ||| | ||| | ||||||||||||||    
T  25803134 cttattccgatatgattcggttcatctagaagctgttggaagccgctcattgttatgcc 25803192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 332
Target Start/End: Original strand, 31103966 - 31104070
Alignment:
Q  228 agttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctca 327  Q
    ||||||||| |||| |||  |||  ||||||| |||||| | |||| ||||| ||||||||||||||||| ||||||||||||| ||||||  | |||||    
T  31103966 agttcttatggaatgagagctaccaaaaagaaaatgcatctagttggtatagatagtatcaaacaattcttataagtcttccttgaaccatgcaatctca 31104065  T
Q  328 tacct 332  Q
    |||||    
T  31104066 tacct 31104070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 359
Target Start/End: Original strand, 25802578 - 25802685
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||| ||||| || || ||||| | ||||||  ||||||||||||| | |||  || |||| ||    
T  25802578 gaaaagaagatgcatcttgttgatataggtagtaccaaaccattcttatcagccttccgttaaccatgcagtctcatacctacatggccacatgatccct 25802677  T
Q  352 ctcattcc 359  Q
    ||||||||    
T  25802678 ctcattcc 25802685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 12820703 - 12820639
Alignment:
Q  309 cttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||  |||| ||||||| |||||| | || ||| ||||||||||||||||||||||||    
T  12820703 cttcaaccatgcagtcccatacctgtacggccttagaatccctctcattccgatgtgattcagtt 12820639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 47518358 - 47518415
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 318  Q
    |||||| |||||| || || |||| |||||||||||| |||||| |||||||||||||    
T  47518358 atgcatcttgttggtagagatagtttcaaacaattcttataagttttccttcaaccat 47518415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 107448 - 107614
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||| ||||||||||||||||||| |||||     
T  107448 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatattggtagtatcaaacaattcttataagc 107545  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||||| |||||| |||| ||| ||||||||||||||||||||||||    
T  107546 cttccttcaaccatgcagtcccatacctgtacggcctcagaatccctctcattccgatgtgattcagtt 107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 11388348 - 11388168
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||| |  ||||     
T  11388348 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattttt-taagc 11388252  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
     ||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  11388251 attccttcaaccatgtagtctcatacctacacggcatcaggatc-ctctcattccgatgtgattcggttcctctaaaagttgtcg 11388168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 30966395 - 30966229
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   |||||||||||| |||| |||  ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  30966395 aagtcaagcacgcttaactatggagttcttatggaatgaga--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 30966298  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||||| |||||| |||||||| |||||||||||||| |||||||||    
T  30966297 cttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctcattccgatgcgattcagtt 30966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 389
Target Start/End: Complemental strand, 33175073 - 33174937
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| |||    
T  33175073 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctc 33174974  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||||| | | ||||| |||||||||    
T  33174973 tcattccgatgtgattcggcttgtctagaagttgtcg 33174937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 33174619 - 33174484
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||  | ||||| |||||||| ||||| |||||||| ||    
T  33174619 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaac--tgtagtcccatacctacacggcatcaggatccct 33174522  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    |||||||||||||||||| ||||||||| ||| |||||    
T  33174521 ctcattccgatgtgattcggttcgtctagaagctgtcg 33174484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 369
Target Start/End: Complemental strand, 29804843 - 29804681
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  29804843 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 29804746  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    || ||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||||||||||    
T  29804745 ctgccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgtgattc 29804681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 389
Target Start/End: Complemental strand, 1707156 - 1707021
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||| || |  |||||||| |||    
T  1707156 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagtcttccttcaatcatgtagtctcatacctacacagtctcaggatc-ctc 1707058  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||||| |||| |||| || ||||||    
T  1707057 tcattccgatgtgattcggttcctctagaaattgtcg 1707021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 389
Target Start/End: Original strand, 18098909 - 18099045
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||  | ||||||||||| |||||||||||||| ||||| |||||||  |||    
T  18098909 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgtagtctcatacctacacggcctcaggattcctc 18099008  T
Q  353 tcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||||||||||| |||| |||| ||| |||||    
T  18099009 tcattccgatgtgattcggttcctctataagctgtcg 18099045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 41754450 - 41754269
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||| ||||| ||||||||||| |||||     
T  41754450 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatatagatagtaccaaacaattcttataagc 41754353  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  ||||||||||||  ||||| ||| || | ||||||||||| ||||||||||||| |||| ||| ||||    
T  41754352 cttccttcaaccatgcagtctcatacctgcacggcctcaagaaccctctcattccggtgtgattcagttcctctagaagctgtc 41754269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 253 - 383
Target Start/End: Complemental strand, 1912640 - 1912510
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||| ||| | ||||||||| |||||||||||||| |   | |||||||| |||    
T  1912640 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaatctactttcaaccatgtagtctcatacctacataacctcaggatccctc 1912541  T
Q  353 tcattccgatgtgattcagttcgtctaaaag 383  Q
    |||||||||||||||||||||| ||||||||    
T  1912540 tcattccgatgtgattcagttcctctaaaag 1912510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 30966851 - 30966685
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||| ||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| ||||      
T  30966851 aagttaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataatc 30966754  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||| | |||||| |||||||| |||||||||||||| |||||||||    
T  30966753 cttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccgatgcgattcagtt 30966685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 253 - 369
Target Start/End: Complemental strand, 1953270 - 1953154
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| | |||||||||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||||||  ||| |||||||||| |||    
T  1953270 aaaagaagatgcatctagttgatataggtagtaccaaacaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcaggatccctc 1953171  T
Q  353 tcattccgatgtgattc 369  Q
    |||||||||||||||||    
T  1953170 tcattccgatgtgattc 1953154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 205 - 360
Target Start/End: Complemental strand, 8256687 - 8256534
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| | ||||||||| |||||     
T  8256687 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagc 8256590  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||||||||||| ||||| |||||||| | ||||||| |||| |||||||||||    
T  8256589 cttccttcaaccatgtagtcccatacctacaaggcttcaagatccctctcattccg 8256534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 261 - 389
Target Start/End: Original strand, 18447957 - 18448085
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| ||||||||| | |||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||| ||||| |||||||| || ||||||||    
T  18447957 atgcatcttgttgatacaagtagtaccaaacaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcattccg 18448056  T
Q  361 atgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||||||| |||| |||||||| |||||    
T  18448057 atgtgattcggttcctctaaaagctgtcg 18448085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 24818487 - 24818321
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| ||||| || |||||| ||||||||||||||||||  |||||||||| |||||     
T  24818487 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagc 24818390  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||| ||||||  |||| ||||| |  ||||| |||||||| ||||||||||||||||||||||||    
T  24818389 cttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgtgattcagtt 24818321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 389
Target Start/End: Original strand, 38898894 - 38899079
Alignment:
Q  202 tctaagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcata 301  Q
    ||||||||||||||| ||||  |||||||||||||  |||  |  ||||  ||||||| |||||| |||||||||||||||||| ||||||||||| |||    
T  38898894 tctaagtcaagcacgcttaactgtggagttcttatgaaatgtg--ttaccaaaaagaaaatgcatcttgttgatataggtagtaccaaacaattcttata 38898991  T
Q  302 agtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||   |||||||||||| |||||| ||||||| ||||| ||| |||| ||||| |||||||||||||  | | ||||| |||||||||    
T  38898992 agctctccttcaaccatgtagtctgatacctacacggcctcaagatcactctccttccgatgtgatttggcttgtctagaagttgtcg 38899079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 252 - 388
Target Start/End: Original strand, 25338027 - 25338163
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| | ||||||||| ||||| ||||||||||||||  |||| |||||||  ||| | |||||| | ||    
T  25338027 gaaaagaagatgcatcttgttgatataggtagtacccaacaattcttataagccttccttcaaccatgcagtcccatacctgcacgacctcaggaaccct 25338126  T
Q  352 ctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||| ||||||||||||| |||| ||| ||||    
T  25338127 ctcattccggtgtgattcagttcctctagaagctgtc 25338163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 252 - 372
Target Start/End: Original strand, 29259650 - 29259770
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||| | ||||| ||||||||||||||  |||| ||||| | |||||  |||||||| ||    
T  29259650 gaaaagaagatgcatcttgttgatatatgtagtaccaaacaattttaataagccttccttcaaccatgcagtcccatacttgtacggtctcaggatccct 29259749  T
Q  352 ctcattccgatgtgattcagt 372  Q
    |||||||||||||||||||||    
T  29259750 ctcattccgatgtgattcagt 29259770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 376
Target Start/End: Complemental strand, 16379508 - 16379385
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||| |||||||  ||||| || ||||| |||    
T  16379508 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcgtataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatccctc 16379409  T
Q  353 tcattccgatgtgattcagttcgt 376  Q
    ||||||| || |||||| ||||||    
T  16379408 tcattccaatttgattcggttcgt 16379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 367
Target Start/End: Complemental strand, 16379098 - 16378938
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| ||||  |   |||  ||||||| |||||| |||||||||||||||||||||||||||||  |||||     
T  16379098 aagtcaagcacgcttaactgtggagttcttatggaatgtgc--taccaaaaagaagatgcatcttgttgatataggtagtatcaaacaattcgtataaga 16379001  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    ||||||||||||||  |||||||||| |  ||||| || | ||| ||||||||||| ||||||    
T  16379000 cttccttcaaccatgcagtctcatacttgcacggcctcggaatccctctcattccggtgtgat 16378938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 25434095 - 25434210
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| ||||||||| |||| ||||||||||||||| ||||| ||||||||||||||  |||| ||||||   ||||| |||||||| |||||||||||    
T  25434095 atgcatcttgttgataaaggttgtatcaaacaattcttataagccttccttcaaccatgaagtcccataccagcacggcctcaggatccctctcattccg 25434194  T
Q  361 atgtgattcagttcgt 376  Q
     |||||||| ||||||    
T  25434195 gtgtgattcggttcgt 25434210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 370
Target Start/End: Original strand, 5399847 - 5399965
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctct 351  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| || |||| ||||||| | || ||||| |  ||| | ||| |||| ||    
T  5399847 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttaaaccatacactcccatacttgcacgacctcaagatccct 5399946  T
Q  352 ctcattccgatgtgattca 370  Q
    |||||||||||||||||||    
T  5399947 ctcattccgatgtgattca 5399965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 11394694 - 11394555
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||| ||||||||| |||||     ||| |||||||| |||||| |||||||||||||||||| ||||||||| |  ||||     
T  11394694 aagtcaagcacgcttaactgtgaagttcttatggaatagc---taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaatt-ttttaagc 11394599  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatc 348  Q
     ||||||||||||| |||||||||||||| ||||| ||||||||    
T  11394598 attccttcaaccatgtagtctcatacctacacggcatcaggatc 11394555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 15620059 - 15619887
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||| ||||||||||||| || |  |  || |  ||||||| ||| || |||||||||||||||||| ||||||||||| |||||     
T  15620059 aagtcaagcacgcttaattgtggagttcttatggattggg--tttccaaaaagaagatgtatcttgttgatataggtagtaccaaacaattcttataagc 15619962  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtcta 379  Q
     | |||||||| ||  |||||||||| |  ||||| || ||||| ||||||||| ||||| |||| |||||||||    
T  15619961 ttgccttcaactatgcagtctcatacttgcacggcatcgggatccctctcattctgatgtaattcggttcgtcta 15619887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 369
Target Start/End: Original strand, 30961865 - 30962038
Alignment:
Q  202 tctaagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcata 301  Q
    ||||||||||||||||||||  ||||||||||||| |  |  |   ||| ||||| ||||||||| |||||||||||||||||| ||| ||| ||| |||    
T  30961865 tctaagtcaagcacgtttaactgtggagttcttatggtttcggc--taccgaaaaaaatatgcatcttgttgatataggtagtaccaatcaaatcttata 30961962  T
Q  302 agtcttcct--------tcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattc 369  Q
    || ||||||        ||||||||  | || |||||||| |||||||||||||||||||||||| ||||||||||    
T  30961963 agacttccttaaatccttcaaccatgcaatcccatacctacacggcttcaggatctctctcattctgatgtgattc 30962038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 357
Target Start/End: Original strand, 8181397 - 8181486
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcatt 357  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||||| | |||| |||||||||| ||  || ||||| ||||||||    
T  8181397 ttgttgatataggtagtaccaaacaattcttaaaagtcttccttcaaccacaaagtcccatacctataaggtctcgggatccctctcatt 8181486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 30963752 - 30963857
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctct 353  Q
    |||||| |||||| |||||||||||||||| | || |||||||| |||||| |||||||||||||  | |||| |||||  ||||||||| |||| ||||    
T  30963752 aaagaagatgcatcttgttgatataggtagaaccatacaattcttataagttttccttcaaccatgcattctcttacctgcacggcttcatgatccctct 30963851  T
Q  354 cattcc 359  Q
    ||||||    
T  30963852 cattcc 30963857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 8074006 - 8073928
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    |||||| |||||| |||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||| | |||||||    
T  8074006 aaagaagatgcatcttgttggtataggtagtaccaaacaattcttataagtctcccttcaaccttatagacccatacct 8073928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 369
Target Start/End: Complemental strand, 16542085 - 16541984
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    ||||||||||||||||||  |||||||| | |||||||||||||||||||| |||  ||||||||| || |||   ||||| || |||||| ||||||||    
T  16542085 ttgttgatataggtagtacaaaacaattattataagtcttccttcaaccatgtagagtcatacctacacagctctgggatccctatcattctgatgtgat 16541986  T
Q  368 tc 369  Q
    ||    
T  16541985 tc 16541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 27882957 - 27883073
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| || ||||||||| || || ||||||||||| |||||  |||||||||| ||  |||||||||| |  ||||| |||||||| |||    
T  27882957 aaaagaagatgcatcttattgatatagataataccaaacaattcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggatccctc 27883056  T
Q  353 tcattccgatgtgattc 369  Q
    ||||| || ||||||||    
T  27883057 tcatttcggtgtgattc 27883073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 33771117 - 33771053
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaacc 316  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  33771117 gaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctttcttcaacc 33771053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 13191089 - 13191010
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    ||||||| |||||| |||||| |||| |||||| ||||||||||| ||||||||||||| ||||||  ||||| ||||||    
T  13191089 aaaagaagatgcatcttgttggtatatgtagtaccaaacaattcttataagtcttccttgaaccatgcagtcttatacct 13191010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 373
Target Start/End: Complemental strand, 83117 - 83012
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||| ||||||||||| ||||| ||||| |||||  | ||||||||||| |||||||||||||  ||    |||||||| |||||||| ||| |||||    
T  83117 ttgttggtataggtagtaccaaacgattcttataagcataccttcaaccatgtagtctcatacctgcacaatctcaggatccctctcatttcgacgtgat 83018  T
Q  368 tcagtt 373  Q
    ||||||    
T  83017 tcagtt 83012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 366
Target Start/End: Original strand, 30963302 - 30963407
Alignment:
Q  261 atgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccg 360  Q
    |||||| |||||||||||||||||| | ||||||||| ||||| |||||||||| |||  | ||  |||| | | |||||||| |||| ||||||||| |    
T  30963302 atgcatcttgttgatataggtagtacctaacaattcttataagccttccttcaatcatgcattcatatacatgtgcggcttcatgatccctctcattctg 30963401  T
Q  361 atgtga 366  Q
    ||||||    
T  30963402 atgtga 30963407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 9909153 - 9909102
Alignment:
Q  307 tccttcaaccatatagtctcatacctatacggcttcaggatctctctcattc 358  Q
    |||||||||||||||||||||||| ||||||  ||||||||| |||||||||    
T  9909153 tccttcaaccatatagtctcatacttatacgatttcaggatccctctcattc 9909102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 15639849 - 15639806
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattc 296  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  15639849 aaaagaagatgtatgttgttgatataggtagtaccaaacaattc 15639806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 20502128 - 20502073
Alignment:
Q  263 gcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccat 318  Q
    |||| ||||||||||||  |||| ||||||||||| ||||| ||||||||||||||    
T  20502128 gcatcttgttgatatagaaagtaccaaacaattcttataagccttccttcaaccat 20502073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 162663 - 162829
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  | ||||||||||| |||| ||   ||| |||||||| |||||| ||||| |||||||||||| ||||||||||| ||||||    
T  162663 aagtcaagcacgcttaactgcggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttataagt 162760  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| ||||||| |||||| |||||||| ||||||||||||||| ||||||||    
T  162761 cttccttcaaccatgcagtcacatacctgtacggcctcaggatccctctcattccgatgtaattcagtt 162829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 332
Target Start/End: Original strand, 69844 - 69925
Alignment:
Q  251 tgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacct 332  Q
    |||||| || ||||||  ||||||||||||||||| ||||||||| | |||||  |||||||||| ||  ||||||||||||    
T  69844 tgaaaaaaagatgcatcatgttgatataggtagtaccaaacaattattataagcattccttcaacgatgcagtctcatacct 69925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 2195 - 2361
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||   | |||||||||| |||||||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  2195 aagtcaagcacgcttaactattgagttcttatggaataagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 2292  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |||||||||||||| ||||| |||||||  ||||| | ||||||  |||||||||||||||||||||||    
T  2293 cttccttcaaccatgtagtcccatacctgcacggccttaggatccttctcattccgatgtgattcagtt 2361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 105881 - 105715
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  105881 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcattttgttgatataggtagtaccaaacaattcttataagc 105784  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    |||||||||||| |  |||  ||||||| |||||| |||||||| ||||||||||||||||||| ||||    
T  105783 cttccttcaaccctgcagttccatacctgtacggcctcaggatccctctcattccgatgtgatttagtt 105715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 205 - 390
Target Start/End: Complemental strand, 154918 - 154735
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   |||||||||||| |||||| ||||||||| |||||||| | ||||||||| |||||     
T  154918 aagtcaagcacgcttaactgtggagttcttatggaatgagc--tactgaaaagaagatgcatcttgttgatacaggtagtacccaacaattcttataagc 154821  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcga 390  Q
    |||||||||||||| ||||| |||||||| | ||| |||||| | |||||||||||  ||||||| |||| |||| ||| ||||||    
T  154820 cttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcga 154735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 245200 - 245084
Alignment:
Q  254 aaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctct 353  Q
    |||||| |||||| |||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||| | ||| |||||||| ||||    
T  245200 aaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctct 245101  T
Q  354 cattccgatgtgattca 370  Q
    |||||||||||||||||    
T  245100 cattccgatgtgattca 245084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 248 - 373
Target Start/End: Complemental strand, 245635 - 245510
Alignment:
Q  248 tactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggat 347  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||  | |||||||||||  |||| |||||||| ||||  ||| |||    
T  245635 tactgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagcatcccttcaaccatgaagtcccatacctacacggactcaagat 245536  T
Q  348 ctctctcattccgatgtgattcagtt 373  Q
    | || |||||  ||||||||||||||    
T  245535 ccctttcattatgatgtgattcagtt 245510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 2036 - 2203
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||     
T  2036 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagc 2133  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttc 374  Q
    ||||||||||||||  ||||||||||||  ||||| |||||| | || |||||| | |||||||| ||||    
T  2134 cttccttcaaccatgcagtctcatacctgcacggcctcaggaaccctttcattctggtgtgattcggttc 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 19127 - 18961
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  |||||||||||||  ||| ||   ||| |||||||| ||| || |||||||||||||||||| ||||||||||| |||||     
T  19127 aagtcaagcacgcttaactgtggagttcttatgaaatgagc--taccgaaaagaagatgaatcttgttgatataggtagtaccaaacaattcttataagc 19030  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||||||||||  |||| |||||||  ||||| || ||||| ||||||||||||||||||| ||||    
T  19029 cttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgatttagtt 18961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 372
Target Start/End: Original strand, 18204 - 18271
Alignment:
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagt 372  Q
    ||||||||||||||  |||| |||||||  ||||| || ||||| |||||||||||||||||||||||    
T  18204 cttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattcagt 18271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 10461 - 10295
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| ||||| || |||||| ||||||||||||||||||  |||||||||| |||||     
T  10461 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaaaaagatgcatcttgttgatataggtagtactaaacaattcttataagc 10364  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagtt 373  Q
    ||||||| ||||||  |||| ||||| |  ||||| |||||||| ||||||||||||||||||||||||    
T  10363 cttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccgatgtgattcagtt 10295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 1381 - 1200
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagt 304  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| ||||| |||||||||||| ||||||||||| |||||     
T  1381 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgtttatataggtagtaccaaacaattcttataagc 1284  T
Q  305 cttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    ||||||||||||||  |||| |||||||  | ||| |||||| |  |||||||||| |||||||| |||| |||| ||||||||    
T  1283 cttccttcaaccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagttgtc 1200  T

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Target: scaffold0007 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 373
Target Start/End: Original strand, 142305 - 142425
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| ||||   |||||||||||||  |||| |||||||  ||||| |||||||| |||    
T  142305 aaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctc 142404  T
Q  353 tcattccgatgtgattcagtt 373  Q
    |||||||||||||||||||||    
T  142405 tcattccgatgtgattcagtt 142425  T

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Target: scaffold0333 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 388
Target Start/End: Complemental strand, 4703 - 4541
Alignment:
Q  224 gtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    |||||||||||||| ||| ||   ||| |||||||| |||||| |||||||||||||||||| |||||||||||  |||  ||||||||||||||  |||    
T  4703 gtggagttcttataaaatgagc--taccgaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttctaaaccttccttcaaccatgcagt 4606  T
Q  324 ctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
    | |||||||  | ||| |||||| | ||||| |||||||||||||| |||| |||| ||| ||||    
T  4605 cccatacctgcatggcctcaggaaccctctccttccgatgtgattcggttcctctagaagctgtc 4541  T

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Target: scaffold0333; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 388
Target Start/End: Complemental strand, 5137 - 4996
Alignment:
Q  252 gaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcat-----aagtcttccttcaaccatatagtctcatacctatacggcttcagga 346  Q
    |||||||| |||||| ||||| |||||||||||| |||||||||||  |     ||  ||||||||||||||  |||| |||||||  | ||| ||||||    
T  5137 gaaaagaagatgcatcttgttaatataggtagtaccaaacaattcttctcttttaaaccttccttcaaccatgcagtcccatacctgcatggcctcagga 5038  T
Q  347 tctctctcattccgatgtgattcagttcgtctaaaagttgtc 388  Q
     | ||||||||||| |||||||| |||| |||| ||||||||    
T  5037 accctctcattccggtgtgattcggttcctctagaagttgtc 4996  T

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Target: scaffold0088 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 23785 - 23662
Alignment:
Q  256 agaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctca 355  Q
    |||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||| |||||||  ||||| ||| || | ||||||    
T  23785 agaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctca 23686  T
Q  356 ttccgatgtgattcagttcgtcta 379  Q
    || || |||||||| |||| ||||    
T  23685 tttcggtgtgattcggttcctcta 23662  T

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Target: scaffold0664 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 370
Target Start/End: Original strand, 4013 - 4130
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctc 352  Q
    ||||||| |||||| ||||||||| |||||||| ||||||||||| |||||  |||||||||| ||  |||| |||||||  ||||| || ||||| |||    
T  4013 aaaagaagatgcatcttgttgatacaggtagtaccaaacaattcttataagcattccttcaacaatgcagtcccatacctgcacggcctcgggatccctc 4112  T
Q  353 tcattccgatgtgattca 370  Q
    |||||| | |||||||||    
T  4113 tcattctggtgtgattca 4130  T

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Target: scaffold0101 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 368
Target Start/End: Complemental strand, 45486 - 45387
Alignment:
Q  268 ttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagtctcatacctatacggcttcaggatctctctcattccgatgtgat 367  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  |  ||||  ||| |||| ||||||||||||||||||    
T  45486 ttgttgatataggtagtaccaaataattctcataagtcttccttcaacaatgtagtcacatatatgcacggtctcaagatc-ctctcattccgatgtgat 45388  T

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Target: scaffold0557 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 2220 - 2150
Alignment:
Q  253 aaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaaccatatagt 323  Q
    ||||||| |||||| ||||| ||||||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  2220 aaaagaagatgcatcttgtttatatagggagtaccaaacaattcttataagccttccttcaaccatgtagt 2150  T

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Target: scaffold0557; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 798 - 729
Alignment:
Q  320 tagtctcatacctatacggcttcaggatctctctcattccgatgtgattcagttcgtctaaaagttgtcg 389  Q
    ||||| |||||||| | ||| |||||||| |||||||||||||||||||| |||| |||| |||||||||    
T  798 tagtcccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctctataagttgtcg 729  T

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Target: scaffold0391 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 14865 - 14794
Alignment:
Q  244 gaattactgaaaagaatatgcatgttgttgatataggtagtatcaaacaattctcataagtcttccttcaac 315  Q
    ||||||| |||||||  |||||| || |||||||||||| || ||||||||||| |||||  ||||||||||    
T  14865 gaattaccgaaaagacgatgcatcttattgatataggtattaccaaacaattcttataagcattccttcaac 14794  T

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Target: scaffold1138 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 774 - 812
Alignment:
Q  299 ataagtcttccttcaaccatatagtctcatacctatacg 337  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  774 ataagtcctccttcaaccatataatctcatacctatacg 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 13518 - 13593
Alignment:
Q  205 aagtcaagcacgtttaatcgtggagttcttatagaataagaattactgaaaagaatatgcatgttgttgatataggta 282  Q
    |||||||||||| ||||  ||||||||||||| |||| ||   ||| |||||||| |||||| |||||||||||||||    
T  13518 aagtcaagcacgcttaactgtggagttcttatggaatgagc--taccgaaaagaagatgcatcttgttgatataggta 13593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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