View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17777_low_17 (Length: 378)

Name: NF17777_low_17
Description: NF17777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17777_low_17
NF17777_low_17
[»] chr3 (45 HSPs)
chr3 (148-371)||(24483696-24483931)
chr3 (187-371)||(31270253-31270437)
chr3 (188-371)||(31462764-31462947)
chr3 (188-371)||(40013290-40013475)
chr3 (188-371)||(14585387-14585573)
chr3 (199-371)||(35174643-35174815)
chr3 (221-367)||(13701994-13702140)
chr3 (221-370)||(48652459-48652608)
chr3 (243-371)||(36691817-36691945)
chr3 (221-371)||(32080772-32080922)
chr3 (221-370)||(48400860-48401009)
chr3 (243-371)||(11819066-11819194)
chr3 (224-370)||(49628106-49628253)
chr3 (213-366)||(53155453-53155603)
chr3 (221-370)||(3456904-3457053)
chr3 (270-367)||(54239040-54239137)
chr3 (256-364)||(22484961-22485069)
chr3 (199-371)||(36624712-36624881)
chr3 (254-368)||(34960879-34960993)
chr3 (233-371)||(38527236-38527374)
chr3 (220-371)||(55090601-55090752)
chr3 (221-371)||(4206529-4206679)
chr3 (243-371)||(40883886-40884015)
chr3 (289-370)||(41868313-41868394)
chr3 (202-368)||(27189414-27189580)
chr3 (243-371)||(30156299-30156427)
chr3 (243-371)||(19645204-19645332)
chr3 (187-368)||(39610131-39610320)
chr3 (279-370)||(33637422-33637513)
chr3 (304-367)||(34103739-34103802)
chr3 (221-370)||(1074913-1075061)
chr3 (239-370)||(19861298-19861427)
chr3 (290-372)||(2147756-2147839)
chr3 (286-372)||(106052-106139)
chr3 (199-371)||(53402568-53402732)
chr3 (270-352)||(4817867-4817949)
chr3 (303-372)||(3312486-3312555)
chr3 (310-368)||(4219229-4219288)
chr3 (316-370)||(55454922-55454976)
chr3 (19-76)||(24483944-24484001)
chr3 (257-372)||(39429516-39429632)
chr3 (310-368)||(5327497-5327556)
chr3 (319-364)||(46732770-46732815)
chr3 (305-342)||(54706715-54706752)
chr3 (334-366)||(47733900-47733932)
[»] chr2 (48 HSPs)
chr2 (188-371)||(12704615-12704798)
chr2 (220-371)||(43474138-43474289)
chr2 (199-368)||(5754227-5754396)
chr2 (188-368)||(31908829-31909009)
chr2 (224-371)||(25067816-25067963)
chr2 (221-371)||(38535315-38535465)
chr2 (188-371)||(36867936-36868119)
chr2 (243-372)||(27095688-27095817)
chr2 (243-371)||(20561142-20561270)
chr2 (221-371)||(33012038-33012188)
chr2 (219-371)||(7072958-7073110)
chr2 (199-371)||(9978679-9978851)
chr2 (212-371)||(35333457-35333616)
chr2 (215-368)||(44942240-44942393)
chr2 (221-371)||(11937868-11938019)
chr2 (258-369)||(13740672-13740783)
chr2 (221-372)||(15919835-15919985)
chr2 (254-368)||(10287019-10287132)
chr2 (188-371)||(22597061-22597246)
chr2 (221-369)||(32015181-32015333)
chr2 (221-371)||(28261898-28262055)
chr2 (270-371)||(28231107-28231208)
chr2 (221-361)||(9689993-9690133)
chr2 (279-371)||(32314461-32314553)
chr2 (254-368)||(34416774-34416888)
chr2 (254-371)||(4604317-4604434)
chr2 (280-370)||(4426669-4426759)
chr2 (270-371)||(4739339-4739440)
chr2 (254-371)||(17268136-17268251)
chr2 (233-370)||(18089407-18089540)
chr2 (207-368)||(34470912-34471074)
chr2 (254-371)||(4732065-4732181)
chr2 (243-366)||(17767566-17767689)
chr2 (296-371)||(13879017-13879091)
chr2 (296-371)||(14019142-14019216)
chr2 (313-369)||(12891131-12891187)
chr2 (188-342)||(34963105-34963261)
chr2 (286-366)||(6431402-6431483)
chr2 (315-368)||(41797649-41797702)
chr2 (270-364)||(17792483-17792578)
chr2 (243-368)||(11581141-11581266)
chr2 (221-342)||(38384481-38384602)
chr2 (319-361)||(20607332-20607374)
chr2 (319-368)||(17116415-17116464)
chr2 (254-360)||(11798537-11798643)
chr2 (270-368)||(15261425-15261524)
chr2 (321-368)||(20598648-20598695)
chr2 (319-368)||(15028323-15028372)
[»] chr7 (55 HSPs)
chr7 (188-371)||(5684293-5684476)
chr7 (188-371)||(5709343-5709526)
chr7 (221-368)||(42603782-42603929)
chr7 (188-371)||(17473733-17473916)
chr7 (188-371)||(17579298-17579481)
chr7 (199-371)||(45457566-45457741)
chr7 (199-371)||(1281147-1281322)
chr7 (243-371)||(28664922-28665050)
chr7 (188-371)||(17509214-17509399)
chr7 (188-371)||(17543815-17544000)
chr7 (221-371)||(46026039-46026189)
chr7 (243-371)||(9785300-9785428)
chr7 (188-371)||(11832943-11833130)
chr7 (221-368)||(10574342-10574489)
chr7 (221-371)||(21603424-21603573)
chr7 (221-371)||(36579322-36579472)
chr7 (253-368)||(2622585-2622700)
chr7 (221-368)||(39532988-39533134)
chr7 (199-370)||(27535395-27535568)
chr7 (279-368)||(10094460-10094549)
chr7 (243-371)||(21990644-21990773)
chr7 (221-369)||(32740714-32740862)
chr7 (221-362)||(42644637-42644778)
chr7 (188-371)||(6667321-6667506)
chr7 (281-371)||(15674622-15674712)
chr7 (219-368)||(48304406-48304557)
chr7 (254-372)||(24320232-24320350)
chr7 (273-371)||(43847083-43847181)
chr7 (221-371)||(41287918-41288069)
chr7 (243-372)||(22747517-22747645)
chr7 (240-372)||(4621376-4621508)
chr7 (244-371)||(45482048-45482175)
chr7 (243-372)||(21954827-21954956)
chr7 (296-371)||(3266424-3266499)
chr7 (304-371)||(32643056-32643123)
chr7 (279-371)||(9719983-9720076)
chr7 (270-372)||(14657830-14657934)
chr7 (318-371)||(26161038-26161091)
chr7 (315-371)||(36719562-36719620)
chr7 (243-369)||(39707273-39707399)
chr7 (257-369)||(37376043-37376160)
chr7 (308-348)||(40761659-40761699)
chr7 (282-372)||(9136979-9137070)
chr7 (319-361)||(6646610-6646652)
chr7 (199-265)||(15674741-15674807)
chr7 (290-359)||(29352275-29352345)
chr7 (319-368)||(39990187-39990236)
chr7 (310-368)||(33476665-33476724)
chr7 (319-360)||(17223163-17223204)
chr7 (321-369)||(10623861-10623909)
chr7 (283-368)||(14810626-14810712)
chr7 (283-368)||(15257621-15257707)
chr7 (243-350)||(17221648-17221754)
chr7 (310-369)||(27705081-27705141)
chr7 (340-368)||(37714558-37714586)
[»] chr5 (42 HSPs)
chr5 (188-371)||(17699481-17699664)
chr5 (221-371)||(17331289-17331439)
chr5 (198-371)||(28040567-28040740)
chr5 (221-371)||(33164478-33164628)
chr5 (199-371)||(32347724-32347899)
chr5 (219-366)||(12439649-12439795)
chr5 (187-371)||(17096249-17096433)
chr5 (221-370)||(6281005-6281154)
chr5 (256-371)||(6635245-6635361)
chr5 (188-368)||(29097717-29097897)
chr5 (255-368)||(27241059-27241172)
chr5 (270-371)||(39179838-39179939)
chr5 (196-360)||(43493808-43493972)
chr5 (241-372)||(178115-178246)
chr5 (245-368)||(34431045-34431168)
chr5 (241-371)||(42609125-42609255)
chr5 (221-370)||(3740319-3740467)
chr5 (221-368)||(20483147-20483294)
chr5 (254-371)||(42396522-42396639)
chr5 (221-371)||(26295067-26295218)
chr5 (273-371)||(3079315-3079413)
chr5 (290-372)||(12891706-12891788)
chr5 (270-372)||(17687215-17687317)
chr5 (243-371)||(23882126-23882254)
chr5 (286-372)||(18653808-18653894)
chr5 (254-363)||(39531422-39531528)
chr5 (220-371)||(981038-981186)
chr5 (243-370)||(6681887-6682012)
chr5 (201-371)||(7771831-7771983)
chr5 (312-371)||(2555360-2555419)
chr5 (306-371)||(11734829-11734892)
chr5 (288-366)||(25961953-25962033)
chr5 (320-361)||(14534959-14535000)
chr5 (310-368)||(25487657-25487716)
chr5 (319-368)||(585867-585916)
chr5 (304-368)||(7150860-7150925)
chr5 (244-371)||(23428226-23428363)
chr5 (319-367)||(26240692-26240740)
chr5 (310-368)||(26905651-26905710)
chr5 (325-368)||(35276001-35276044)
chr5 (320-369)||(12215195-12215244)
chr5 (323-368)||(32309226-32309271)
[»] chr6 (29 HSPs)
chr6 (199-371)||(15590089-15590261)
chr6 (188-371)||(8693667-8693853)
chr6 (221-370)||(12481381-12481530)
chr6 (224-370)||(21507819-21507965)
chr6 (221-371)||(23654211-23654361)
chr6 (221-371)||(6419868-6420018)
chr6 (188-371)||(2304820-2305003)
chr6 (243-370)||(31937431-31937556)
chr6 (245-371)||(14783181-14783307)
chr6 (221-371)||(19402818-19402968)
chr6 (219-371)||(6296259-6296414)
chr6 (219-371)||(6303069-6303224)
chr6 (278-371)||(23638128-23638221)
chr6 (289-372)||(4921890-4921973)
chr6 (221-366)||(35219920-35220063)
chr6 (270-372)||(4393780-4393882)
chr6 (312-370)||(29927105-29927163)
chr6 (304-371)||(31705209-31705276)
chr6 (188-304)||(4084945-4085062)
chr6 (283-350)||(31937563-31937629)
chr6 (254-368)||(15175807-15175920)
chr6 (310-368)||(20028711-20028769)
chr6 (318-368)||(31801243-31801293)
chr6 (304-353)||(15057725-15057774)
chr6 (291-372)||(2488169-2488250)
chr6 (319-368)||(8508202-8508251)
chr6 (254-368)||(15470248-15470361)
chr6 (335-368)||(7870247-7870280)
chr6 (310-362)||(9044099-9044152)
[»] chr8 (36 HSPs)
chr8 (199-371)||(24791186-24791358)
chr8 (188-371)||(9501517-9501701)
chr8 (243-371)||(30026898-30027026)
chr8 (219-371)||(37612612-37612764)
chr8 (221-371)||(31202419-31202569)
chr8 (221-371)||(31407766-31407916)
chr8 (221-368)||(14600719-14600866)
chr8 (221-368)||(39067710-39067857)
chr8 (254-368)||(10338843-10338957)
chr8 (243-371)||(12329609-12329738)
chr8 (254-370)||(41361726-41361842)
chr8 (200-371)||(1810238-1810405)
chr8 (257-371)||(2234488-2234602)
chr8 (220-371)||(2025227-2025378)
chr8 (245-371)||(3204774-3204899)
chr8 (280-370)||(31308168-31308258)
chr8 (221-369)||(11161843-11161991)
chr8 (275-370)||(37128505-37128600)
chr8 (299-371)||(7579873-7579945)
chr8 (243-362)||(13570753-13570872)
chr8 (221-371)||(23971114-23971262)
chr8 (221-370)||(10147907-10148057)
chr8 (219-371)||(1039912-1040062)
chr8 (261-364)||(15288823-15288926)
chr8 (261-364)||(15469192-15469295)
chr8 (243-371)||(24699813-24699943)
chr8 (286-371)||(4757191-4757276)
chr8 (296-371)||(22787528-22787603)
chr8 (271-366)||(32778973-32779069)
chr8 (280-372)||(2968551-2968644)
chr8 (254-372)||(30039354-30039466)
chr8 (270-371)||(28297124-28297227)
chr8 (270-368)||(7281655-7281756)
chr8 (239-364)||(10334153-10334279)
chr8 (322-369)||(13576207-13576254)
chr8 (310-368)||(42260984-42261043)
[»] chr4 (53 HSPs)
chr4 (188-368)||(22757022-22757202)
chr4 (199-371)||(43244391-43244563)
chr4 (188-371)||(20399913-20400099)
chr4 (199-371)||(394284-394450)
chr4 (199-371)||(7083826-7083997)
chr4 (188-371)||(25658092-25658278)
chr4 (221-368)||(26742476-26742623)
chr4 (220-370)||(6911640-6911790)
chr4 (254-368)||(7060318-7060432)
chr4 (245-371)||(13965545-13965671)
chr4 (221-371)||(24568723-24568873)
chr4 (254-371)||(29268787-29268904)
chr4 (188-364)||(39837522-39837699)
chr4 (221-368)||(24825610-24825757)
chr4 (200-371)||(26674309-26674483)
chr4 (221-371)||(8712491-8712641)
chr4 (221-371)||(11210323-11210473)
chr4 (221-371)||(27394791-27394941)
chr4 (254-372)||(44757051-44757169)
chr4 (221-371)||(30201999-30202149)
chr4 (187-371)||(29922761-29922948)
chr4 (254-371)||(38944158-38944274)
chr4 (221-368)||(24100099-24100249)
chr4 (219-369)||(12717129-12717281)
chr4 (188-363)||(478030-478201)
chr4 (223-372)||(5814310-5814459)
chr4 (270-371)||(6881966-6882067)
chr4 (274-371)||(43493297-43493394)
chr4 (254-371)||(51152119-51152235)
chr4 (243-371)||(7861216-7861343)
chr4 (188-352)||(31521910-31522074)
chr4 (257-364)||(626566-626671)
chr4 (280-371)||(50801237-50801328)
chr4 (254-371)||(20887766-20887882)
chr4 (254-371)||(45351080-45351199)
chr4 (254-371)||(45360559-45360678)
chr4 (255-371)||(19745384-19745501)
chr4 (255-371)||(19794305-19794422)
chr4 (284-371)||(39523433-39523520)
chr4 (243-372)||(22049413-22049542)
chr4 (304-371)||(8517466-8517533)
chr4 (257-371)||(36124359-36124471)
chr4 (279-371)||(13586250-13586343)
chr4 (296-371)||(24611809-24611884)
chr4 (270-368)||(2447810-2447908)
chr4 (243-371)||(42197536-42197665)
chr4 (270-353)||(3159052-3159136)
chr4 (323-372)||(28837128-28837177)
chr4 (311-370)||(32616836-32616895)
chr4 (221-330)||(7084167-7084276)
chr4 (291-372)||(27090755-27090836)
chr4 (320-360)||(1551568-1551608)
chr4 (340-368)||(22621513-22621541)
[»] scaffold0312 (1 HSPs)
scaffold0312 (221-371)||(6098-6248)
[»] chr1 (39 HSPs)
chr1 (221-371)||(424301-424451)
chr1 (221-366)||(28678145-28678290)
chr1 (221-370)||(4882370-4882519)
chr1 (188-371)||(29205210-29205396)
chr1 (243-371)||(32784091-32784219)
chr1 (221-371)||(42490854-42491004)
chr1 (221-368)||(33487043-33487190)
chr1 (221-371)||(3232749-3232899)
chr1 (221-371)||(27534660-27534810)
chr1 (243-368)||(12871604-12871729)
chr1 (270-371)||(44517157-44517258)
chr1 (255-371)||(37822355-37822471)
chr1 (221-371)||(7995570-7995721)
chr1 (219-370)||(20411532-20411683)
chr1 (243-371)||(14265267-14265395)
chr1 (199-371)||(42276299-42276466)
chr1 (270-371)||(10627010-10627111)
chr1 (220-371)||(13488546-13488699)
chr1 (245-372)||(17347584-17347709)
chr1 (221-363)||(18343575-18343717)
chr1 (287-369)||(29726608-29726690)
chr1 (286-371)||(51418040-51418124)
chr1 (221-361)||(4871046-4871186)
chr1 (304-371)||(15391262-15391329)
chr1 (221-368)||(45750439-45750586)
chr1 (289-368)||(45193639-45193718)
chr1 (312-371)||(15791285-15791344)
chr1 (289-366)||(28399336-28399414)
chr1 (240-372)||(33125814-33125946)
chr1 (203-371)||(33939023-33939180)
chr1 (243-361)||(9298434-9298551)
chr1 (243-353)||(32878691-32878798)
chr1 (283-367)||(38783090-38783175)
chr1 (328-369)||(50107926-50107967)
chr1 (319-364)||(30678315-30678359)
chr1 (255-315)||(15791554-15791614)
chr1 (340-372)||(47551177-47551209)
chr1 (310-368)||(32301388-32301447)
chr1 (310-368)||(45425485-45425544)
[»] scaffold0536 (1 HSPs)
scaffold0536 (187-368)||(2830-3010)
[»] scaffold0056 (1 HSPs)
scaffold0056 (244-360)||(74148-74264)
[»] scaffold1379 (2 HSPs)
scaffold1379 (254-372)||(1095-1213)
scaffold1379 (286-371)||(1-86)
[»] scaffold0321 (1 HSPs)
scaffold0321 (260-368)||(7137-7245)
[»] scaffold0001 (1 HSPs)
scaffold0001 (254-370)||(404269-404385)
[»] scaffold0155 (1 HSPs)
scaffold0155 (240-370)||(35062-35194)
[»] scaffold0432 (1 HSPs)
scaffold0432 (199-361)||(2438-2600)
[»] scaffold0121 (1 HSPs)
scaffold0121 (221-371)||(13255-13411)
[»] scaffold1350 (1 HSPs)
scaffold1350 (291-371)||(1605-1685)
[»] scaffold0294 (1 HSPs)
scaffold0294 (245-368)||(4080-4202)


Alignment Details
Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 148 - 371
Target Start/End: Complemental strand, 24483931 - 24483696
Alignment:
Q  148 ctatttgattaatgtatgccaacaactttttataattggtttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttt---------- 237  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |  || ||||||||||||||||||| ||||||||||||| || ||              
T  24483931 ctatttgattaatgcatgccaacaattttttataattggtttctatcattctcaaaccctagttgtcacccttttcttcttcttcttcttcttcttcttt 24483832  T
Q  238 --tgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgt 335  Q
      ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24483831 tctgagaggtgatttggagtcaattttgacacacaaatcacccatctgaattgtttttcattctatcataattgaataagtgatttcacatattttctgt 24483732  T
Q  336 tttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| | | |||||||||||||||| ||||||||||    
T  24483731 tttcatacatttgtttttgtgattttgtcgtctctg 24483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 187 - 371
Target Start/End: Original strand, 31270253 - 31270437
Alignment:
Q  187 tttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaat 286  Q
    ||||||| ||||||||| ||||| |||||||||||||||||| || ||||| ||  |||||||| | |||||||||||| || ||||||||| | |||||    
T  31270253 tttctctccttttcaaatcctagatgtcaccattttcttcttattctttttagatgggtgatttagggtcaattttgacccaaaaatcaccccttcgaat 31270352  T
Q  287 tgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    | |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  31270353 tatttttccttctatcctaattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtaatttcgtcgtctctg 31270437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 31462947 - 31462764
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| ||||||| | | ||||||||||||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||||| | ||||||    
T  31462947 ttctctccttctcaaaccttggctgtcaccattttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaatt 31462848  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| || |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31462847 gtttttccttatatcctaattgaataagtgattttacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctg 31462764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 40013475 - 40013290
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| ||||||| |||| |||||||||||||||||||| ||||  ||  |||||||| | |||||||||||| || ||||||||| | ||||||    
T  40013475 ttctctccttctcaaaccatagtcgtcaccattttcttcttcttcttttcagat-ggtgatttagtgtcaattttgacccaaaaatcacccattcgaatt 40013377  T
Q  288 gtttttcattctatcat---aattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| ||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013376 gtttttccttctatcctcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 40013290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 14585387 - 14585573
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgtttttt---gagaggtgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| |||||||||||| ||| || |||||||| |||| || |||   ||| |||||||| |||||||||||||| || ||||||| | ||  |    
T  14585387 ttctctccttctcaaaccctagtcgtcgcccttttcttcgtcttcttcttttcagaggggtgatttagagtcaattttgacccaaaaatcactcctctaa 14585486  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  14585487 attgtttttccttctatcctaattgaataagtgatttcacatattttctgttttcttttgtttgtttttgtgatttcctcgtctctg 14585573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 199 - 371
Target Start/End: Original strand, 35174643 - 35174815
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||| |||||| ||||||||||||| ||||   || ||| |||  | |||||||| ||| || ||||||||| |  |||||||||||| |||    
T  35174643 tcaaaccctagtcgtcacccttttcttcttcttcttttcataggggttattaagggtcaatttcgacccaaaaatcacccctttgaattgtttttccttc 35174742  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35174743 tatcctaattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctg 35174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 221 - 367
Target Start/End: Complemental strand, 13702140 - 13701994
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| |||||||| | |||||||||||| || || |||||| | |||||| |||||| |||||||||||||||||||||||||    
T  13702140 ttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgatt 13702041  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  13702040 tcacatattttctgttttctttcatttgtttttgtgatttcgtcgtc 13701994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 221 - 370
Target Start/End: Complemental strand, 48652608 - 48652459
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| |||||||| | ||||| |||||| || ||||||||| ||||| ||||||||| ||||| | |||||||||||||||||    
T  48652608 ttcttcttcttcttgtcagaggggtgatttagggtcaactttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatt 48652509  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48652508 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 48652459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 36691945 - 36691817
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  36691945 ggtgatttagggtcaattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttcacatattttctgtttccttt 36691846  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||    
T  36691845 cgtttgtttttgtgatttcgtcgtctctg 36691817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 32080922 - 32080772
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||||||||| |  ||  |||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||| | |||||||||| ||||||    
T  32080922 ttcttcttcttgttgtcagatgggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataggtgatt 32080823  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32080822 tcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctg 32080772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 48400860 - 48401009
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||| ||| |||||||| | |||||||||||| || ||||||| | || |||||||||||| ||||| | || || |||||||||||    
T  48400860 ttcttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcacacatcggaattgtttttccttctaccctattttaataagtgatt 48400959  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48400960 tcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctct 48401009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 11819066 - 11819194
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||| | |||||||||||||||||||||||||||| ||||||||||    
T  11819066 ggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttatgttttcttt 11819165  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    | |||||||||||||||||||||||||||    
T  11819166 catttgtttttgtgatttcgtcgtctctg 11819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 224 - 370
Target Start/End: Complemental strand, 49628253 - 49628106
Alignment:
Q  224 ttcttcttgttttttgagaggtgatttg-gagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc 322  Q
    |||||||| ||||| ||| ||||||||  | ||||||||||||  | ||||||||| || |||||||||||| ||||||| || ||||||||||||||||    
T  49628253 ttcttcttctttttagaggggtgatttttgggtcaattttgacctaaaaatcacccctctgaattgtttttccttctatcctagttgaataagtgatttc 49628154  T
Q  323 acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49628153 acatattttttgttttctttcgtttgtttttgtgatttcgtcgtctct 49628106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 213 - 366
Target Start/End: Complemental strand, 53155603 - 53155453
Alignment:
Q  213 tcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaat 312  Q
    |||||||||||||||||||   ||| ||| |||||||| | |||||||||||| || ||||||||| | ||||||||||||| || |||| ||||| |||    
T  53155603 tcaccattttcttcttctt---tttagaggggtgatttagggtcaattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaat 53155507  T
Q  313 aagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  53155506 aagtgatttcacatattttatgttttctttcgtttgtttttgtaatttcgtcgt 53155453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 3456904 - 3457053
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| ||||||||   |||||||||||  || ||||||||  ||||||||||||||| ||||||| |||||||||||||||||    
T  3456904 ttcttcttcttcttttcagaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatt 3457003  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    | ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  3457004 taacatattttttgttttctttcctttgtttttgtgatttcgtcgtctct 3457053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 270 - 367
Target Start/End: Complemental strand, 54239137 - 54239040
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    ||||||| | ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54239137 aaatcacacatccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 54239040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 22484961 - 22485069
Alignment:
Q  256 caattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgt 355  Q
    |||||||||| || ||||||| |||||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22484961 caattttgacccaaaaatcactcttccggattgtttttccttctatcctaattgaataagtgatttcgcatattttctgttttctttcgtttgtttttgt 22485060  T
Q  356 gatttcgtc 364  Q
    |||||||||    
T  22485061 gatttcgtc 22485069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 36624881 - 36624712
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    ||||||||||  ||||||| |||| ||||||||   ||  ||| |||||||  | ||||||  |||| || ||||||||| ||||||||||||||| |||    
T  36624881 tcaaaccctaactgtcacccttttattcttctt---ttcagaggggtgattcagggtcaatcatgacccaaaaatcacccatccgaattgtttttccttc 36624785  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36624784 tatcctaactaaataagtgatttcacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctg 36624712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 34960993 - 34960879
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||||| || |||||||||||  ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34960993 gtcaattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgatttcacatattttatgttttctttcgtttgttttt 34960894  T
Q  354 gtgatttcgtcgtct 368  Q
    |||||||| ||||||    
T  34960893 gtgatttcatcgtct 34960879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 233 - 371
Target Start/End: Original strand, 38527236 - 38527374
Alignment:
Q  233 ttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttc 332  Q
    ||||| ||| |||||||| |  ||||| ||||  || ||||||| | ||| ||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  38527236 tttttagaggggtgatttaggatcaatcttgaaccaaaaatcacacatccaaattgtttttccttctatcttaattgaataaatgatttcacatattttc 38527335  T
Q  333 tgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  38527336 tgttttctttcgtttgtttttatgatttcgtcgtctctg 38527374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 55090752 - 55090601
Alignment:
Q  220 tttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    |||||||||||| || |  ||| |||||||| | || |||||  || || ||||||||| ||||| ||||||||| ||||| | ||||| ||||||||||    
T  55090752 tttcttcttcttcttgtcagaggggtgatttagggttaatttcaacccaaaaatcacccctccgatttgtttttccttctaccttaattaaataagtgat 55090653  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  55090652 ttcacatattttctgttttctttcatttgtttttgtgattccgtcgtctctg 55090601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 4206679 - 4206529
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||| | ||||| ||| ||||||||   |||||||||||   | ||||||||| |||||||||||||||  | |||| |||||||||||||| ||    
T  4206679 ttcttcttcctctttttagaggggtgatttatggtcaattttgatcaaaaaatcacccctccgaattgtttttccatatatcctaattgaataagtgttt 4206580  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  4206579 tcacatattttttattttcttttgtttgtttttgtgatttcgtcgtctctg 4206529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 40884015 - 40883886
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgttttt-cattctatcataattgaataagtgatttcacatattttctgttttctt 341  Q
    |||||||| | |||||||||||| || |||||| |  | |||||||||||| | || |||| ||||||||||||||||||||| ||||||||||||||||    
T  40884015 ggtgatttagggtcaattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttcacttattttctgttttctt 40883916  T
Q  342 tcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||||||| ||||    
T  40883915 tcgtttgtttttgtgatttcgtcgtttctg 40883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 289 - 370
Target Start/End: Complemental strand, 41868394 - 41868313
Alignment:
Q  289 tttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41868394 tttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgtcgtctct 41868313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 202 - 368
Target Start/End: Complemental strand, 27189580 - 27189414
Alignment:
Q  202 aaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctat 301  Q
    ||||||||  ||||||  |||||||||||  ||| | ||| |||||||| |||||||||||||  || |||| || ||||||||||||||||| ||||||    
T  27189580 aaccctagccgtcacccctttcttcttctc-tttgtagaggggtgatttagagtcaattttgatccaaaaattactcttccgaattgtttttccttctat 27189482  T
Q  302 cataattgaataagtgatttcacatattttctg-ttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    | ||||||||||||| |||||||||| |||||| |||| |||| ||||||||||||||||| ||||||    
T  27189481 cctaattgaataagtaatttcacataatttctgtttttttttcatttgtttttgtgatttcatcgtct 27189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 30156427 - 30156299
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||||||||||||| | || |||| |||||||||||||||||||||||||||| || |||||||    
T  30156427 ggtgatttagggtcaattttgacccaaaaatcacccctccgaattgttttccttt-tatcctaattgaataagtgatttcacatattttatgatttcttt 30156329  T
Q  343 cg-tttgtttttgtgatttcgtcgtctctg 371  Q
    || ||||||||| |||||||||| ||||||    
T  30156328 cgttttgtttttatgatttcgtcttctctg 30156299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 19645204 - 19645332
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | ||||||||||||  | ||| || || ||||||||||||||  |||| || ||||| ||||||||||||||||||||||||||||| |||    
T  19645204 ggtgatttagggtcaattttgacctaaaaaccatccatccgaattgttttttcttctgtcctaattaaataagtgatttcacatattttctgtttttttt 19645303  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    | ||||||||||||||| |||||||||||    
T  19645304 cctttgtttttgtgattacgtcgtctctg 19645332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 39610131 - 39610320
Alignment:
Q  187 tttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaat 286  Q
    ||||||| ||| |||||||||||  ||||||  |||||||||||| || |  ||| ||||||||   |||||||||||| ||  |||||||| ||||| |    
T  39610131 tttctctccttctcaaaccctagacgtcacccctttcttcttcttcttgtcagaggggtgatttatggtcaattttgacccaataatcacccctccgagt 39610230  T
Q  287 tgttttt--------cattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||        | ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  39610231 tgttttttttttcttccttctatcctaattgaataagtgatttcacatattttttgtttcctttcgtttgtttttgtgattttgtcgtct 39610320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 279 - 370
Target Start/End: Original strand, 33637422 - 33637513
Alignment:
Q  279 ttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||| ||||||||| ||||| | |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33637422 ttccgatttgtttttccttctaccttaattgaataaaagatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctct 33637513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 34103802 - 34103739
Alignment:
Q  304 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34103802 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 34103739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 370
Target Start/End: Complemental strand, 1075061 - 1074913
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| ||||||||   |||||||||||| || ||||||||| ||||| ||||||||| || |||  ||||||||||||||| |    
T  1075061 ttcttcttcttcttgtcagaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtga-t 1074963  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||  ||||||||||||||||||||||||| ||||||| |||||||||    
T  1074962 tcacacgttttctgttttctttcgtttgttttcgtgattttgtcgtctct 1074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 370
Target Start/End: Complemental strand, 19861427 - 19861298
Alignment:
Q  239 gagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctg-ttt 337  Q
    |||||||||||| | |||||||||||| || ||||||||| |  || |||||| || |||  |||||||||||||||||||||||||||||| ||| |||    
T  19861427 gagaggtgatttagggtcaattttgactcaaaaatcacccat--gagttgtttgtccttcc-tcataattgaataagtgatttcacatatttcctgtttt 19861331  T
Q  338 tctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    | |||||||||||||||||||||||||||||||    
T  19861330 tttttcgtttgtttttgtgatttcgtcgtctct 19861298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 2147756 - 2147839
Alignment:
Q  290 ttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  2147756 ttttcgttctatcctaattgaataagtgatttccacatattttcagttttctttcatttgtttttgtgatttcgtcgtctctgc 2147839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 106139 - 106052
Alignment:
Q  286 ttgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  106139 ttgtttttcattctaccctaattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtgattttgtcgtctctgc 106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 371
Target Start/End: Original strand, 53402568 - 53402732
Alignment:
Q  199 tcaaaccctagttgtcacca-ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcatt 297  Q
    |||||||||||| ||||||  ||||||||||||| |||||  |   |||||||   |||||||||||| || ||||||||| ||||||||||||||| ||    
T  53402568 tcaaaccctagtcgtcaccccttttcttcttcttctttttaaatgagtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttcctt 53402667  T
Q  298 ctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||  ||||| ||||||||         |||||||| |||||||||||||||||||||||||| |||||||||    
T  53402668 ctattctaattcaataagtg---------attttctgctttctttcgtttgtttttgtgatttcatcgtctctg 53402732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 4817949 - 4817867
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttt 352  Q
    |||| |||| ||| ||||||||||| || |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  4817949 aaattacccctccaaattgtttttctttttatcctaattgaataggtgatttcacatattttctattttctttcgtttgtttt 4817867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 372
Target Start/End: Original strand, 3312486 - 3312555
Alignment:
Q  303 ataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| || |||||||    
T  3312486 ataattgaataagtgatttcacatattttaagttttctttcgtttgtttttgttatttcatcatctctgc 3312555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 4219229 - 4219288
Alignment:
Q  310 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  4219229 aataagtgattttcacatattttcagttttctttcgtttgtttttatgatttcgtcgtct 4219288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 55454922 - 55454976
Alignment:
Q  316 tgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  55454922 tgatttcacatattttttattttctttcgtttgtttttgtgatatcgtcgtctct 55454976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24484001 - 24483944
Alignment:
Q  19 ttttgttatattgacattttgtagttagtattagagactaggcagtaacatgttatac 76  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  24484001 ttttattatattgacattttgtagttagcattagagactaggtagtaacgtgttatac 24483944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 372
Target Start/End: Complemental strand, 39429632 - 39429516
Alignment:
Q  257 aattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatatttt-ctgttttctttcgtttgtttttg 354  Q
    ||||||||| || ||||||||| || |||||||||||| |||| |  |||||||| ||||| |||| |||| |||| | || |||||||||||||||||     
T  39429632 aattttgaccca-aaatcacccatctgaattgtttttccttcttttctaattgaacaagtgctttccacatgtttttcagtcttctttcgtttgtttttt 39429534  T
Q  355 tgatttcgtcgtctctgc 372  Q
    ||||||||||||||||||    
T  39429533 tgatttcgtcgtctctgc 39429516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 5327556 - 5327497
Alignment:
Q  310 aataagtgatt-tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  5327556 aataagtgattatcacaaattttcagttttctttcgtttgtttttgtgatttcgttgtct 5327497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 46732815 - 46732770
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtc 364  Q
    ||||||||||||||  |||| |||| ||||||||||||||||||||    
T  46732815 tttcacatattttcaattttatttcttttgtttttgtgatttcgtc 46732770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 54706752 - 54706715
Alignment:
Q  305 aattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  54706752 aattcaataagtgatttcacatattttctattttcttt 54706715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 366
Target Start/End: Complemental strand, 47733932 - 47733900
Alignment:
Q  334 gttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    |||||||||||||||||||||||||||| ||||    
T  47733932 gttttctttcgtttgtttttgtgatttcatcgt 47733900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 6e-59; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 12704615 - 12704798
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||| |||||| ||||||||||||| ||||| ||| |||||||| | |||||||||||| || ||||||||| | ||||||    
T  12704615 ttctctccttctcaaaccctagtcgtcacccttttcttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaatt 12704714  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12704715 gtttttccttatatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctg 12704798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 43474289 - 43474138
Alignment:
Q  220 tttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    |||||||||||| ||||| ||| |||||||| | |||||||||||| || ||||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  43474289 tttcttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgat 43474190  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43474189 ttcacaaattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 43474138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 199 - 368
Target Start/End: Original strand, 5754227 - 5754396
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||  |||| ||||||||||||||| ||||| ||| |||||||| | |||||||||||| || |||||| || ||||||||||||||| |||    
T  5754227 tcaaaccctagccgtcatcattttcttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattgtttttccttc 5754326  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||| || |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  5754327 tatcctagttgaataaatgatttcacatattttttgttttctttcatttgtttttgtgatttcgtcgtct 5754396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 31909009 - 31908829
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| ||||||| ||| |||||||  ||| |||||||| ||||| ||| | |||||| |||||||||||||  || ||||||||||||||||||    
T  31909009 ttctctccttctcaaaccttagctgtcacccctttattcttcttctttttagagggatgatttagagtcaattttgatccaaaaatcacccttccgaatt 31908910  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||  || |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31908909 gttttttcttttatcctagttgaataagtgatttcacatattttctgttttctttcgtttgtttttctgatttcgtcgtct 31908829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 224 - 371
Target Start/End: Original strand, 25067816 - 25067963
Alignment:
Q  224 ttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttca 323  Q
    |||||||| || || |||||||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||||  ||||||||||||||||||||    
T  25067816 ttcttcttcttgttagagaggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctattttaattgaataagtgatttca 25067915  T
Q  324 catattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  25067916 catattttctgttttctttcgtttctttttgtgatttcgtcgtctctg 25067963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 38535465 - 38535315
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| |||||||| | |||||||||||| || ||| ||||| |  ||||| |||||| |||||||||||||||||||||||||    
T  38535465 ttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatt 38535366  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38535365 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 38535315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 36867936 - 36868119
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||  ||||||||| |||||||||| ||| | ||| |||||||| | |||||||||||| || ||||||||| || |||||    
T  36867936 ttctctccttctcaaaccctagccgtcaccattctcttcttcttctttctagaggggtgatttagggtcaattttgactcaaaaatcacccctctgaatt 36868035  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| ||||||  ||||| |||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  36868036 gtttttccttctattctaattcaataagcgatttcacatattttctactttctttcgtttgtttttgcgatttcgtcgtctctg 36868119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 243 - 372
Target Start/End: Original strand, 27095688 - 27095817
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | ||||||||||||  | ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  27095688 ggtgatttagggtcaattttgacctaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttttgttttcttt 27095787  T
Q  343 cgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||||||||||||||||||||||||    
T  27095788 cgtttgtttttgtgatttcgtcgtctctgc 27095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 20561270 - 20561142
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||||||||||||||| |||||||  ||| ||||||||| ||||||||||||||||||||||||    
T  20561270 ggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttcacatattttctgttttcttt 20561171  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||    
T  20561170 cgtttgtttttgtgatttcgtcgtctctg 20561142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 33012038 - 33012188
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||  |||||||| | |||||||||||| || ||||||| | ||||||||||||||| ||||||  |||||||||||||||||    
T  33012038 ttcttcttcttcttttcagacgggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgatt 33012137  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  33012138 tcacatattttcagttttgtttcgtttgtttttgtgatttcgtcgtctctg 33012188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 7073110 - 7072958
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga 318  Q
    ||||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||| ||||| ||||||| ||||| ||||||| ||||||||||||| |    
T  7073110 ttttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcgccctttcgaattggttttccttctatcctaattgaataagtaa 7073011  T
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
     |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  7073010 cttcacaaattttctgttttctttcgtttgtttttgtgatttcatcgtctctg 7072958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 9978851 - 9978679
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    ||||||| |||| ||||||  |||||| ||||| |||   ||| ||||||||   |||||||||||| || ||||||||| | | ||||||||||| ||     
T  9978851 tcaaaccttagtcgtcacccctttctttttcttctttccagaggggtgatttaaggtcaattttgacccaaaaatcaccccttcaaattgtttttccttt 9978752  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9978751 tatcttaattgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 9978679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 212 - 371
Target Start/End: Original strand, 35333457 - 35333616
Alignment:
Q  212 gtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaa 311  Q
    ||||||| |||||||||||| || ||| | || |||||| |  ||||||||||| || ||||||||| |  |||||||||||| | ||||| ||||||||    
T  35333457 gtcaccactttcttcttctttttctttcaaagatgatttaggatcaattttgacccaaaaatcacccctaagaattgtttttcctgctatcctaattgaa 35333556  T
Q  312 taagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  35333557 taagtgatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtttctg 35333616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 215 - 368
Target Start/End: Original strand, 44942240 - 44942393
Alignment:
Q  215 accattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataa 314  Q
    |||| |||||||||||| ||||  ||  ||||||||   |||||||||||| || ||||||||| ||||| ||||||||  ||||||| |||||||||||    
T  44942240 accactttcttcttcttcttttcagatgggtgatttatggtcaattttgacccaaaaatcacccctccgagttgttttttcttctatcctaattgaataa 44942339  T
Q  315 gtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  44942340 gtgatttcacatattttatgttttcttttgtttgtttttgtgatttcgtcgtct 44942393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 11938019 - 11937868
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcatt-ctatcataattgaataagtgat 319  Q
    ||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||||| ||||||||||||||| || ||||| ||||||||||||||||    
T  11938019 ttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgat 11937920  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||| ||||||||||||||  ||||||| ||||| |||||||||    
T  11937919 ttcacatattttttgttttctttcgttgatttttgtaatttcttcgtctctg 11937868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 13740783 - 13740672
Alignment:
Q  258 attttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtga 357  Q
    |||||||| || ||||||||  ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13740783 attttgacccaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcatatattttctgttttctttcgtttgtttttgtga 13740684  T
Q  358 tttcgtcgtctc 369  Q
    ||||||| ||||    
T  13740683 tttcgtcatctc 13740672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 221 - 372
Target Start/End: Original strand, 15919835 - 15919985
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||| ||| || || ||| |||||||| |||||||||||||| || ||||||||| ||||| ||||||||| ||||||| ||||||||||| |||||    
T  15919835 ttcttctccttcttattagaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatt 15919934  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||||||   ||||||||||||||||||||||||||||| |||||||    
T  15919935 tcacatattttc-aatttctttcgtttgtttttgtgatttcgtcatctctgc 15919985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 10287132 - 10287019
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    ||||||||||||| | ||||||||| |||||||||  |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10287132 gtcaattttgacataaaaatcacccctccgaattgcatttcttt-tatcctaattgaataagtgatttcacatattttctgttttctttcgtttgttttt 10287034  T
Q  354 gtgatttcgtcgtct 368  Q
    |||||||||||||||    
T  10287033 gtgatttcgtcgtct 10287019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 22597061 - 22597246
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattt--tcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaa 285  Q
    |||||| ||| |||||||||||| |||||| |||  ||||||| || || |  ||| ||||||||   |||||||||||| || |||||| || |||||     
T  22597061 ttctctccttctcaaaccctagtcgtcaccctttcttcttctttttcttgtcagaggggtgatttaaggtcaattttgacccaaaaatcatccctccgag 22597160  T
Q  286 ttgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  22597161 ttgtttttccttctatcctaattaaataagtgatttcacatattttttgttttctttcgtttgtttttatgattttgtcgtctctg 22597246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 32015181 - 32015333
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaata----agt 316  Q
    ||||||||||| || || ||| |||||||| | |||||||||||| || ||||||||| ||||| ||||||||| || |||||||||| ||||    |||    
T  32015181 ttcttcttctttttgttagaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttatatcataattcaataaataagt 32015280  T
Q  317 gatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  32015281 gatttcacatattttctgttttcattcatttgtttttgtgatttcgtcgtctc 32015333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 28262055 - 28261898
Alignment:
Q  221 ttcttcttcttgttttttgaga--ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataatt-----gaata 313  Q
    ||||||||||| || ||| |||  |||||||| | |||||||||||| || ||||||| | ||||||||||||||| |||||||||||||     |||||    
T  28262055 ttcttcttcttcttctttcagatgggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctatcataatttaattgaata 28261956  T
Q  314 agtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28261955 tgtgattttacatattttctgttttctttcgtttgtttttgtgatttcttcgtctctg 28261898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 28231208 - 28231107
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||| ||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  28231208 aaatcacccatccgaattgtttttccttctatcttggttgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattccatcgtctc 28231109  T
Q  370 tg 371  Q
    ||    
T  28231108 tg 28231107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 9690133 - 9689993
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| ||||||||   ||||| |||||| || ||||||||| |||||| |||||||| ||||||| ||||||||||||||||     
T  9690133 ttcttcttcttcttttcagaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactgtttttccttctatcctaattgaataagtgatc 9690034  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttc 361  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  9690033 tcacatattttttgttttttttcgtttgtttttgtgatttc 9689993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 279 - 371
Target Start/End: Original strand, 32314461 - 32314553
Alignment:
Q  279 ttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32314461 ttccgaattgttttttcttctatcctaattgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctg 32314553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 34416888 - 34416774
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    ||||||||||||  | |||||| || ||||||||||||||| || |||| ||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  34416888 gtcaattttgaccaaaaaatcatccctccgaattgtttttccttatatcctaattgaataagtgatttcacatattttcagtttttttttgtttgttttt 34416789  T
Q  354 gtgatttcgtcgtct 368  Q
    |||||||||||||||    
T  34416788 gtgatttcgtcgtct 34416774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 4604434 - 4604317
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || |||| || | | ||| ||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  4604434 gtcaattttgacccaaaaattactcattcgagttgtttttccttctattctaattgaataagtgatttcacatattttctgctttctttcgattgttttt 4604335  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||    
T  4604334 gtgatttcgtcgtctctg 4604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 4426759 - 4426669
Alignment:
Q  280 tccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  4426759 tccgatttgtttttccttctatcctaattgaataaatgatttcacatattttctgttttctttcatttgtttttttgatttcgtcgtctct 4426669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 4739339 - 4739440
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||| ||||| ||||||||| ||| ||| ||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  4739339 aaatcacccctccgagttgtttttccttccatcctaattaaataagtaatttcacatattttctgtttttttccgtttgtttttgtgatttcgtcgtctc 4739438  T
Q  370 tg 371  Q
    ||    
T  4739439 tg 4739440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 17268251 - 17268136
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || |||||| || | ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  17268251 gtcaattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt-ttttgtttg-tttt 17268154  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||    
T  17268153 gtgatttcgtcgtctctg 17268136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 370
Target Start/End: Complemental strand, 18089540 - 18089407
Alignment:
Q  233 ttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttc 332  Q
    ||||| ||| |||||||| | |||||||||||  || ||||||| | ||||||||||||||  || |||| |||||||||||||||||||||||||||||    
T  18089540 tttttagaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattgttttttcttatatcctaattgaataagtgatttcacatattttc 18089441  T
Q  333 tgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||    || |||||||||||||||||||||||    
T  18089440 tgttttct----ttagtttttgtgatttcgtcgtctct 18089407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 368
Target Start/End: Original strand, 34470912 - 34471074
Alignment:
Q  207 tagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcac--ccttccgaattgtttttcattctatcat 304  Q
    |||| |||||| ||||||| ||||| ||||| ||| || | || || |||||||||||| || |||||||  || |||||||||||| || ||||||| |    
T  34470912 tagtcgtcacccttttctttttcttctttttagaggggggtttagg-gtcaattttgacccaaaaatcacacccctccgaattgtttatctttctatctt 34471010  T
Q  305 aattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||| || || ||||||    
T  34471011 aattgaatcagtgatttcacatattttctattttctttcgtttgtttttgtaatgtcttcgtct 34471074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 4732065 - 4732181
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || |||||||||||   | |||  |||| ||||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  4732065 gtcaattttgactcaaaaatcacccttgttagttgcatttccttctatcctaattgaataagtgatttcacatactttttgtttt-tttcgtttgttttt 4732163  T
Q  354 gtgatttcgtcgtctctg 371  Q
    |||||||| |||||||||    
T  4732164 gtgatttcatcgtctctg 4732181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 366
Target Start/End: Complemental strand, 17767689 - 17767566
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctt 341  Q
    |||||||| |||||||||||||| || || |||||| | ||| ||||||||| || |||| ||||| ||||||||||||| |||||||||| ||||||||    
T  17767689 ggtgatttagagtcaattttgacccagaa-tcaccccttcgagttgtttttccttatatcctaattaaataagtgatttccacatattttcagttttctt 17767591  T
Q  342 tcgtttgtttttgtgatttcgtcgt 366  Q
    || |||| |||||||||||||||||    
T  17767590 tcatttgattttgtgatttcgtcgt 17767566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 13879091 - 13879017
Alignment:
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  13879091 ttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt-gtcgtctctg 13879017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 14019216 - 14019142
Alignment:
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  14019216 ttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt-gtcgtctctg 14019142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 12891187 - 12891131
Alignment:
Q  313 aagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12891187 aagtgatttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctc 12891131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 342
Target Start/End: Complemental strand, 34963261 - 34963105
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttc---ttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| | ||||||||  |||||||| ||||||||||   ||||| |  ||| ||| |||| | ||||||||||||  | |||||||||| | ||    
T  34963261 ttctctccttctgaaaccctaactgtcaccactttcttcttcctcttgttgtcagaggggtaattttgggtcaattttgacctaaaaatcaccct-ctga 34963163  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
     ||||||||| ||||| | ||||||||||||||||||||||| |||||||||||||||    
T  34963162 tttgtttttccttctaccctaattgaataagtgatttcacattttttctgttttcttt 34963105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 366
Target Start/End: Complemental strand, 6431483 - 6431402
Alignment:
Q  286 ttgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    ||||||||| || |||  ||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  6431483 ttgtttttccttatattctaattaaataagtgatttccacatattttcagttttcttttgtttgtttttgtgatttcgtcgt 6431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 368
Target Start/End: Original strand, 41797649 - 41797702
Alignment:
Q  315 gtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  41797649 gtgatttcacatattatatgttttctttcgtttgtttttgtgatttcgtcgtct 41797702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 17792483 - 17792578
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtc 364  Q
    ||||||||| |||  |||||||||| |||| |  || || |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17792483 aaatcacccctccatattgtttttctttctcttctagttaaataagcgattttcacatattttcagttttctttcgtttgtttttgtgatttcgtc 17792578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 368
Target Start/End: Complemental strand, 11581266 - 11581141
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctt 341  Q
    ||||||||||||| ||||||||| || |||| |||  | ||||||||||||| |||| |  |  || |||||||||||| || |||||||  ||||||||    
T  11581266 ggtgatttggagttaattttgaccca-aaataacctcttcgaattgtttttctttctctttttgttaaataagtgattttcatatatttttagttttctt 11581168  T
Q  342 tcgtttgtttttgtgatttcgtcgtct 368  Q
    | |||||||||||||||||||||||||    
T  11581167 tggtttgtttttgtgatttcgtcgtct 11581141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 38384602 - 38384481
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||| || ||||| || ||| |||||||| | |||||||||||| || |||||||   ||||| ||||||||| || || | |||||||||||||||||    
T  38384602 ttcttgttgttgttgttagaggggtgattttgggtcaattttgacccaaaaatcacatctccgatttgtttttccttataccctaattgaataagtgatt 38384503  T
Q  321 tcacatattttctgttttcttt 342  Q
    |||||| |||| ||||| ||||    
T  38384502 tcacattttttttgtttccttt 38384481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 20607374 - 20607332
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttc 361  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  20607374 tttcacatattttcagttttctttcgtttgtttttgtgatttc 20607332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 17116464 - 17116415
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  17116464 tttcacatattttcagtcttctttcgtttgtttatgtgatttcgtcgtct 17116415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 11798643 - 11798537
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttt 352  Q
    |||||||||||| || ||||||||| |||   ||| ||||| || |||| ||||| ||||||| ||||| |||||||||  ||||||||| |||||||||    
T  11798643 gtcaattttgaccca-aaatcacccctccatgttgcttttccttatatcctaattaaataagtaatttccacatatttttagttttcttttgtttgtttt 11798545  T
Q  353 tgtgattt 360  Q
    ||||||||    
T  11798544 tgtgattt 11798537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 368
Target Start/End: Complemental strand, 15261524 - 15261425
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtga--tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    ||||||||||||||||||||||||| |||| |  ||  | |||||||||  ||| ||||| |||| ||||||||||| ||| |||||||||||||| |||    
T  15261524 aaatcacccttccgaattgtttttctttctcttttagctaaataagtgattttttacataatttcagttttctttcg-ttgattttgtgatttcgttgtc 15261426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 368
Target Start/End: Complemental strand, 20598695 - 20598648
Alignment:
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| ||||| || |||||||||||||| |||||||||||    
T  20598695 tcacatattttcagttttattacgtttgtttttgtggtttcgtcgtct 20598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 15028372 - 15028323
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||| || |||||||||||||||||  |||||| ||||||    
T  15028372 tttcacatattttcagtcttctttcgtttgttttttcgatttcatcgtct 15028323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 5684293 - 5684476
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||||| ||||||||||||||| | |||||||||| || |||||  || |||||||| | |||||||||||| || ||||||||  ||||||||    
T  5684293 ttctctcctttttaaaccctagttgtcatccttttcttcttattctttttaaaggggtgatttagggtcaattttgacgcaaaaatcacctctccgaatt 5684392  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  5684393 gtttttcattctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgttgtctctg 5684476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 5709343 - 5709526
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||||| ||||||||||||||| | |||||||||| || |||||  || |||||||| | |||||||||||| || ||||||||  ||||||||    
T  5709343 ttctctcctttttaaaccctagttgtcatccttttcttcttattctttttaaaggggtgatttagggtcaattttgacgcaaaaatcacctctccgaatt 5709442  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  5709443 gtttttcattctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgttgtctctg 5709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 42603929 - 42603782
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||| ||| ||||||||   |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42603929 ttcttcttcttctttttagagcggtgatttatggtcaattttgactcaaaaatcacccctccgaattgtttttcattctatcataattgaataagtgatt 42603830  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42603829 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 42603782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 17473916 - 17473733
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| ||||||||||||||||||| |||||||||| || ||||  | | |||||||| | ||||||||||||  | ||||||||| ||||||||    
T  17473916 ttctctccttctcaaaccctagttgtcacccttttcttcttattcttttcagtggggtgatttagggtcaattttgaccaaaaaatcacccctccgaatt 17473817  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  17473816 gtttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttcatttgtttttgtgattttgtcgtctctg 17473733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 17579298 - 17579481
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| ||||||||||||||||||| |||||||||| || ||||  | | |||||||| | ||||||||||||  | ||||||||| ||||||||    
T  17579298 ttctctccttctcaaaccctagttgtcacccttttcttcttattcttttcagtggggtgatttagggtcaattttgaccaaaaaatcacccctccgaatt 17579397  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  17579398 gtttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttcatttgtttttgtgattttgtcgtctctg 17579481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 45457741 - 45457566
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttctt---cttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttca 295  Q
    |||||||||||||||||||  |||||||||   ||| ||||| ||| |||||||| | |||||||||||| || ||||||| | |||||||||||||||     
T  45457741 tcaaaccctagttgtcacccctttcttctttttcttctttttagaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattgtttttcc 45457642  T
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  45457641 ttctatcttaattgaataagtgatttcacatattttatgttttctttcgtttgttttcgtgatttcatcgtctctg 45457566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 1281322 - 1281147
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgtt-ttttgaga--ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttca 295  Q
    ||||||||||||||||||| ||||||||| ||| || |||| |||  |||||||| | ||| ||||||||  | ||||||||| ||||||||||||||||    
T  1281322 tcaaaccctagttgtcacccttttcttctacttattcttttcagatgggtgatttagggtccattttgaccaaaaaatcacccatccgaattgtttttca 1281223  T
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    || |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1281222 ttatattctaattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctg 1281147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 28665050 - 28664922
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| |  ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  28665050 ggtgatttagggtcaattttgaccctaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgttttcttt 28664951  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||| ||||||||||    
T  28664950 cgtttgtttttgtgattttgtcgtctctg 28664922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 17509399 - 17509214
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgtt-ttttgagagg--tgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| || |||| |||||  |||||| | ||||||||||||  | |||||||||| ||||    
T  17509399 ttctctccttctcaaaccctagttgtcacccttttcttcttcttcttcttttcagagggatgatttagggtcaattttgaccaaaaaatcaccct-ccga 17509301  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||| |||||| || |||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||    
T  17509300 attatttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttaatttgtttttgtgattttgtcgtctctg 17509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 17543815 - 17544000
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgtt-ttttgagagg--tgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| || |||| |||||  |||||| | ||||||||||||  | |||||||||| ||||    
T  17543815 ttctctccttctcaaaccctagttgtcacccttttcttcttcttcttcttttcagagggatgatttagggtcaattttgaccaaaaaatcaccct-ccga 17543913  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||| |||||| || |||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||    
T  17543914 attatttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttaatttgtttttgtgattttgtcgtctctg 17544000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 46026189 - 46026039
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||| | ||||||||||||||| ||||||| ||||||||||||| |||    
T  46026189 ttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttatt 46026090  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    | ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  46026089 taacatattttttgttttctttcgtttgtttttgttatttcgtcgtctctg 46026039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 9785300 - 9785428
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9785300 ggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttt 9785399  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
     |||| |||||||||||||||||||||||    
T  9785400 tgtttatttttgtgatttcgtcgtctctg 9785428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 11832943 - 11833130
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgtt-ttttgagagg--tgatttggagtcaattttgacacacaaatcaccct-tccg 283  Q
    |||||| ||| |||||||||||  |||| |  |||||||||||| || |||| |||||  ||||||   |||||||||||| || |||||||||  ||||    
T  11832943 ttctctccttctcaaaccctagccgtcatctctttcttcttcttcttcttttcagagggatgatttatggtcaattttgacccaaaaatcaccccctccg 11833042  T
Q  284 aattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11833043 aattgtttttccttctttcctaattgaataagtgatttcacatattttctgtattctttcgtttgtttttgtgatttcgtcgtctctg 11833130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 221 - 368
Target Start/End: Original strand, 10574342 - 10574489
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||| ||||| ||||| ||  |||||||| | |||||||||||| || ||||||||| ||||||||||||||| || |||| |||||||||||  ||||    
T  10574342 ttctttttcttctttttagatgggtgatttagggtcaattttgactcaaaaatcacccctccgaattgtttttccttttatcctaattgaataaacgatt 10574441  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  10574442 ttacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 10574489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 21603424 - 21603573
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||||||  |||| ||| |||||||| | |||||||||||| || ||| ||||| || |||||||||||| ||||||| |||||||||||||||||    
T  21603424 ttcttcttctttgttttagaggggtgatttagggtcaattttgac-caaaaagcacccctctgaattgtttttccttctatcctaattgaataagtgatt 21603522  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  21603523 tcacatattctctgttttctttcctttgtttttgtgattttgtcgtctctg 21603573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 36579472 - 36579322
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| | |||||| | |||||||||||| |  ||||||||| ||||||||||||||| ||||||| || ||||||||||||||    
T  36579472 ttcttcttcttcttttaagagggatgatttagggtcaattttgacccgaaaatcacccctccgaattgtttttccttctatcctagttgaataagtgatt 36579373  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
     |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  36579372 ccacatattttttgttttcttttgtttgtttttgtgatttcgtcgtctctg 36579322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 253 - 368
Target Start/End: Original strand, 2622585 - 2622700
Alignment:
Q  253 agtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttt 352  Q
    ||||||||||||| || ||||||| | ||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  2622585 agtcaattttgacccaaaaatcacgcatccgaattgtttttccttctatcttaattgaataagtaatttcagatattttctgttttcttgcgtttgtttt 2622684  T
Q  353 tgtgatttcgtcgtct 368  Q
    ||||||||||||||||    
T  2622685 tgtgatttcgtcgtct 2622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 39533134 - 39532988
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||| ||||| ||||| ||| |||||||| | |||||||||||| || |||||| |  || |||||||||||| ||||||| |||||||||||||||||    
T  39533134 ttctttttcttctttttagag-ggtgatttagggtcaattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatt 39533036  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  39533035 tcacatattttctgttttcttttgtttgttttcgtgatttcgtcgtct 39532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 199 - 370
Target Start/End: Original strand, 27535395 - 27535568
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||| |||||| ||||||||||||| |||   ||| |||||||| | ||||||||| |  || ||||||||| ||||||||||||||| |||    
T  27535395 tcaaaccctagtcgtcacccttttcttcttcttttttacagaggggtgatttagggtcaatttttatccaaaaatcacccatccgaattgtttttccttc 27535494  T
Q  299 tatcataattgaataagtgatttcac--atattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||  |||||| ||||||||||||||  |||||||||||||| |||| |||||||||||||||| |||||||||    
T  27535495 tattctaattgtataagtgatttcacatatattttctgttttatttcatttgtttttgtgattttgtcgtctct 27535568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 279 - 368
Target Start/End: Original strand, 10094460 - 10094549
Alignment:
Q  279 ttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10094460 ttccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 10094549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 21990644 - 21990773
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgttttt-cattctatcataattgaataagtgatttcacatattttctgttttctt 341  Q
    |||||||| | ||||||||||||  | ||||||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||| ||||||||||||    
T  21990644 ggtgatttagggtcaattttgactgaaaaatcacccctccgaattgttttttcctgctatcctaattgaataagtgatttcacatatattctgttttctt 21990743  T
Q  342 tcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||||||| ||||    
T  21990744 tcgtttgtttttgtgatttcgtcgtttctg 21990773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 32740714 - 32740862
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgac-acacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    ||||||||||| ||||  ||| |||||||| |||||||||||||| | | |||||||||   ||||||||||||| ||||||| ||||||||||||||||    
T  32740714 ttcttcttcttcttttcagag-ggtgatttagagtcaattttgaccaaaaaaatcaccccctcgaattgtttttccttctatcctaattgaataagtgat 32740812  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  32740813 ttcacatattttttgttttctttcgttgatttttgtgatttcgtcgtctc 32740862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 221 - 362
Target Start/End: Original strand, 42644637 - 42644778
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| |||||||| |  ||||||||||| || ||||||| | |  |||||||||||| ||||||| |||||||||||||||||    
T  42644637 ttcttcttcttcttttcagaggggtgatttaggatcaattttgactcaaaaatcactcatttgaattgtttttccttctatcctaattgaataagtgatt 42644736  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcg 362  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  42644737 tcacatattctctgttttctttcgtttgtttttgtgatttcg 42644778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 6667321 - 6667506
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattt--tcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaa 285  Q
    |||||| ||| |||||||||||  |||||| |||  |||||||||| ||||| |||  ||||||| | |||||||||||| || |||||||||  |||||    
T  6667321 ttctctccttctcaaaccctagccgtcaccctttcttcttcttcttctttttagaggagtgatttagggtcaattttgacccaaaaatcaccccaccgaa 6667420  T
Q  286 ttgtttttcattctatcataa-ttgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||  ||||||  ||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  6667421 ttgttttttcttctattctaatttgaataagtgatttcacatattttctgttttgttt-gtttgtttctgtgatttcgtcgtctctg 6667506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 371
Target Start/End: Complemental strand, 15674712 - 15674622
Alignment:
Q  281 ccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15674712 ccgaattgtttttcctcctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcatctctg 15674622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 368
Target Start/End: Complemental strand, 48304557 - 48304406
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga 318  Q
    ||||||| ||||| ||||  ||| |||||||| | |||||||||||| || ||||||||| ||||||||| ||||| | ||||| |||||||||||||||    
T  48304557 ttttctttttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtga 48304458  T
Q  319 tttcacatattttctgttttctttcgtttg--tttttgtgatttcgtcgtct 368  Q
    ||||| | |||||||||||||||| |||||  ||||||||||||||||||||    
T  48304457 tttcatagattttctgttttctttagtttgtttttttgtgatttcgtcgtct 48304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 254 - 372
Target Start/End: Complemental strand, 24320350 - 24320232
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||| | | ||| ||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  24320350 gtcaattttgactcaaaaatcactcattcgagttgtttttccttctatcttaatttaataagtgatttcacatattttttgttttcttttgtttgttttt 24320251  T
Q  354 gtgatttcgtcgtctctgc 372  Q
    |||||||| ||||||||||    
T  24320250 gtgatttcatcgtctctgc 24320232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 43847083 - 43847181
Alignment:
Q  273 tcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||| ||||||||||||||| |  |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43847083 tcacccctccgaattgtttttcctcttatcctaattgaataagtgatttcacatattttctgttttccttcgtttgttttggtgatttcgtcgtctctg 43847181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 41287918 - 41288069
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgttttt-cattctatcataattgaataagtgat 319  Q
    ||||||||||| || || ||| |||||||| | |||||||||||| ||  |||||||| ||||| |  ||||| | ||||||| |||||||||| |||||    
T  41287918 ttcttcttcttcttcttagaggggtgatttagggtcaattttgacccaataatcacccatccgagtgattttttccttctatcctaattgaataggtgat 41288017  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  41288018 ttcacatattttctgtttcctttcgtttgttttagtgattttgtcgtctctg 41288069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 243 - 372
Target Start/End: Complemental strand, 22747645 - 22747517
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||| | ||||||| | ||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  22747645 ggtgatttagggtcaattttgacccaaaaatcacccctccaagttgttttcc-ttctatcctaattgaataagtgatttgacatattttatgttttcttt 22747547  T
Q  343 cgtttgtttttgtgatttcgtcgtctctgc 372  Q
    | ||| |||||||||||||| |||||||||    
T  22747546 catttatttttgtgatttcgccgtctctgc 22747517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 372
Target Start/End: Complemental strand, 4621508 - 4621376
Alignment:
Q  240 agaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttc 339  Q
    |||||| |||| ||||||||||||||  | ||||||| ||| ||| ||||||||| ||||| |||||||||||||| ||||||| || ||||| ||||||    
T  4621508 agaggttatttagagtcaattttgacctaaaaatcactctttcgagttgtttttccttctaccataattgaataagcgatttcatatgttttcagttttc 4621409  T
Q  340 tttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||||||||||||||||||| | || |||||||    
T  4621408 tttcgtttgtttttgtgattccatcatctctgc 4621376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 244 - 371
Target Start/End: Original strand, 45482048 - 45482175
Alignment:
Q  244 gtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttc 343  Q
    ||||||| | |||||||||||| |  ||||||||| |||||  |||||||| ||||||| ||||| |||||||||||||||||||||| ||  || ||||    
T  45482048 gtgatttagggtcaattttgaccccaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacatattttatgcgttgtttc 45482147  T
Q  344 gtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| |||||||||||||||||    
T  45482148 gtttgtttttatgatttcgtcgtctctg 45482175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 243 - 372
Target Start/End: Complemental strand, 21954956 - 21954827
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctt 341  Q
    |||||||| | ||||||||| || || ||||||| | ||||| ||||||||||||||||| ||||| ||||| ||||||| ||||||| || ||||||||    
T  21954956 ggtgatttagggtcaattttaaccca-aaatcactcatccgagttgtttttcattctatcctaattaaataaatgatttccacatattgtcagttttctt 21954858  T
Q  342 tcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||| ||||||||||||||||||||||||||    
T  21954857 tcgtctgtttttgtgatttcgtcgtctctgc 21954827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 371
Target Start/End: Original strand, 3266424 - 3266499
Alignment:
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  3266424 ttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattttgtcgtctctg 3266499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 32643056 - 32643123
Alignment:
Q  304 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32643056 taattgaacaagtgatttcacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctg 32643123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 9720076 - 9719983
Alignment:
Q  279 ttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctg-ttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||||||||  || |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  9720076 ttccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtttttttttcgtttgtttttgtgatttcgtcatctctg 9719983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 14657934 - 14657830
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatat--tttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    ||||||||  |||||  |||||||| ||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||||||||||||||||||||    
T  14657934 aaatcaccaatccgagctgtttttccttctatcttaattgaataagttatttcacatatattttcagttttcttttgtttgtttttgtgatttcgtcgtc 14657835  T
Q  368 tctgc 372  Q
    |||||    
T  14657834 tctgc 14657830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 26161038 - 26161091
Alignment:
Q  318 atttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26161038 atttcacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctg 26161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 36719620 - 36719562
Alignment:
Q  315 gtgatttcacata--ttttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36719620 gtgatttcacataaattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 36719562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 369
Target Start/End: Original strand, 39707273 - 39707399
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctt 341  Q
    |||||||| | |||||||||||| || |||||| |  ||||| ||||||||| ||||||| ||||| ||||||| ||||| |  |||||||  ||||| |    
T  39707273 ggtgatttagggtcaattttgaccca-aaatcatcactccgagttgtttttctttctatcctaattaaataagttatttccatgtattttcacttttcat 39707371  T
Q  342 tcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||||||||||||||||||||||    
T  39707372 tcgtttgtttttgtgatttcgtcgtctc 39707399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 369
Target Start/End: Complemental strand, 37376160 - 37376043
Alignment:
Q  257 aattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttca------catattttctgttttctttcgtttgtt 350  Q
    ||||||||| || | ||||||| | |||||| |||||| ||||||| |||||||||||||| |||||      |||||||||| ||||||||||||||||    
T  37376160 aattttgactcaaagatcaccccttcgaattatttttccttctatc-taattgaataagtggtttcagtttctcatattttctattttctttcgtttgtt 37376062  T
Q  351 tttgtgatttcgtcgtctc 369  Q
    | |||||||| ||||||||    
T  37376061 tatgtgattttgtcgtctc 37376043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 40761659 - 40761699
Alignment:
Q  308 tgaataagtgatttcacatattttctgttttctttcgtttg 348  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  40761659 tgaataagtgatttcacatattttatgttttctttcgtttg 40761699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 9136979 - 9137070
Alignment:
Q  282 cgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||||||| |||| |   ||||| | ||||||||| ||||||||| | || ||||||||||| ||||||||||| ||||||||||||    
T  9136979 cgaattgtttttccttctttttcaattggaaaagtgattttcacatatttcccgtcttctttcgtttctttttgtgattccgtcgtctctgc 9137070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 6646652 - 6646610
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttc 361  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  6646652 tttcacatattttcagttttctttcgtttgattttgtgatttc 6646610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 15674807 - 15674741
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgac 265  Q
    |||||||||||| |||||| ||||||||||||| ||||  ||| |||||||| | ||||||||||||    
T  15674807 tcaaaccctagtcgtcacccttttcttcttcttcttttcagaggggtgatttagggtcaattttgac 15674741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 29352275 - 29352345
Alignment:
Q  290 ttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatt 359  Q
    |||| ||| |||| ||||| ||||||||||||| ||||||| || ||||||||||||||||||| ||||||    
T  29352275 tttttattatatcctaattaaataagtgatttccacatattctcagttttctttcgtttgttttcgtgatt 29352345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 39990236 - 39990187
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||| ||||||||||||||||||| ||||| |||| ||||    
T  39990236 tttcacatattttcagttttctttcgtttgttttcgtgatatcgttgtct 39990187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 33476724 - 33476665
Alignment:
Q  310 aataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||| ||||||||||  |||| || ||||||||||| ||||||||||||||    
T  33476724 aataagtgatttccacatattttcaattttattccgtttgtttttatgatttcgtcgtct 33476665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 17223163 - 17223204
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgattt 360  Q
    |||||||||||||| | |||||||||| ||||||||||||||    
T  17223163 tttcacatattttcaggtttctttcgtctgtttttgtgattt 17223204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 10623861 - 10623909
Alignment:
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||| |||| ||||||||||||||||||||||| ||| ||| ||||    
T  10623861 tcacatagtttcggttttctttcgtttgtttttgtggtttagtcatctc 10623909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 368
Target Start/End: Original strand, 14810626 - 14810712
Alignment:
Q  283 gaattgtttttcattctatcataattgaataagtgattt--cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| |||| |  || || ||||||||||||  ||||||||| | | ||||||||||| ||||| |||||||||||||||    
T  14810626 gaattgtttttctttctcttttagttaaataagtgatttttcacatatttacagctttctttcgttggtttt-gtgatttcgtcgtct 14810712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 368
Target Start/End: Original strand, 15257621 - 15257707
Alignment:
Q  283 gaattgtttttcattctatcataattgaataagtgattt--cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| |||| |  || || ||||||||||||  ||||||||| | | ||||||||||| ||||| |||||||||||||||    
T  15257621 gaattgtttttctttctcttttagttaaataagtgatttttcacatatttacagctttctttcgttggtttt-gtgatttcgtcgtct 15257707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 350
Target Start/End: Original strand, 17221648 - 17221754
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctt 341  Q
    ||||||||  ||| ||||||||| || ||||||||| || |||||||||| |||| ||   ||||||||||  |||||| ||||||||||| | ||||||    
T  17221648 ggtgatttatagtgaattttgac-caaaaatcacccctctgaattgtttt-cattatactctaattgaatatatgattttcacatattttcaggtttctt 17221745  T
Q  342 tcgtttgtt 350  Q
    |||||||||    
T  17221746 tcgtttgtt 17221754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 27705141 - 27705081
Alignment:
Q  310 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    |||||||||||| || ||||||| | || ||||||||||| ||||||||||| ||||||||    
T  27705141 aataagtgattttcatatattttttattctctttcgtttgattttgtgattttgtcgtctc 27705081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 37714558 - 37714586
Alignment:
Q  340 tttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||||||||||||||||||    
T  37714558 tttcgtttgtttttgtgatttcgtcgtct 37714586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 17699481 - 17699664
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||| |||||| ||||||||||||| ||||  ||   ||||||| | |||||||||||| || ||||||||| ||||||||    
T  17699481 ttctctccttctcaaaccctagtcgtcacccttttcttcttcttcttttcagatgagtgatttagggtcaattttgacccaaaaatcacccctccgaatt 17699580  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17699581 gtttttccttctatcctaattgaataagtgatttcacatcttttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 17699664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 17331289 - 17331439
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||||||||| |  ||| |||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||    
T  17331289 ttcttcttcttgttgtcagaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatt 17331388  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17331389 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 17331439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 371
Target Start/End: Original strand, 28040567 - 28040740
Alignment:
Q  198 ttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcatt 297  Q
    ||||||| ||||  ||||||| |||||||||||| ||||  ||| ||||||||   |||||||||||| || ||||||||| ||| ||| ||||||| ||    
T  28040567 ttcaaactctagccgtcaccactttcttcttcttcttttcagaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcgtttttcctt 28040666  T
Q  298 ctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28040667 atatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 28040740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 33164628 - 33164478
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||| ||||| |  ||| ||||||||   |||||||||||| || ||||||| | ||||||||||||||| ||||| | |||||||||||||||||    
T  33164628 ttcttcttgttgttgtcagaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattgtttttccttctaccttaattgaataagtgatt 33164529  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33164528 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 33164478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 32347899 - 32347724
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagagg--tgatttggagtcaattttgacacacaaatcacccttccgaattgttttt-ca 295  Q
    |||||||||||  ||||||||| |||||||||| | |||| |||||  |||||| | ||||| |||||| || ||||||||| ||||| |||||||| |     
T  32347899 tcaaaccctagccgtcaccattctcttcttcttttcttttcagaggggtgatttagggtcaactttgacccaaaaatcacccctccgacttgttttttcc 32347800  T
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  32347799 ttctatcctaattgaataagtgatttcacatattttctgttttatttcgtttgtttttgtgatttcgtcgtttctg 32347724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 366
Target Start/End: Complemental strand, 12439795 - 12439649
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga 318  Q
    |||| |||||||| |||||||||||||||||| | |  |||||||||  | |||||||||| |||||||||||||||||||||| || ||||||||||||    
T  12439795 tttttttcttcttcttttttgagaggtgatttagggataattttgacctaaaaatcaccct-ccgaattgtttttcattctatcctagttgaataagtga 12439697  T
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12439696 tttcatatattttttgttttctttcgtttgtttttgtgatttcgtcgt 12439649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 371
Target Start/End: Complemental strand, 17096433 - 17096249
Alignment:
Q  187 tttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaat 286  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||     ||| |||||||| | |||||||||||| ||  |||||||| ||| | |    
T  17096433 tttctcttcttctcaaaccctagttgtcacccatttcttcttcttgtca---gaggggtgatttagggtcaattttgacccaataatcacccctcccagt 17096337  T
Q  287 tgttttt---cattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||   | ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  17096336 tgttttttttccttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgattttgtcgtctctg 17096249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 6281005 - 6281154
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||| ||| ||||||||   |||||||||||| || ||||||||| || ||||| |||||| ||||||  |||||||||||||||||    
T  6281005 ttcttcttcttctttttagaggggtgatttatggtcaattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgatt 6281104  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6281105 ttacatattttctattttctttcgtttgtttttgtgatttcgtcgtctct 6281154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 6635245 - 6635361
Alignment:
Q  256 caattttgacacacaaatcaccct-tccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttg 354  Q
    |||||||||| || |||||||||| || || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6635245 caattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttcacatattttctgttttctttagtttgtttttg 6635344  T
Q  355 tgatttcgtcgtctctg 371  Q
    |||||||||||||||||    
T  6635345 tgatttcgtcgtctctg 6635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 188 - 368
Target Start/End: Original strand, 29097717 - 29097897
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||| |||  |  |||||||||||| || |   || |||||||| | |||||||||||| || | ||||||| ||||| ||    
T  29097717 ttctctccttctcaaaccctagtcgtcgaccctttcttcttcttcttgtcctaggggtgatttagggtcaattttgacccaaagatcacccctccgattt 29097816  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29097817 gtttttccttctaccttaattgaataagtgatttcacatattttctgttttctttagtttgtttttgtgatttcgtcgtct 29097897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 255 - 368
Target Start/End: Original strand, 27241059 - 27241172
Alignment:
Q  255 tcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttg 354  Q
    ||||||||||| || ||||||||| || |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27241059 tcaattttgacccaaaaatcacccctctgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttg 27241158  T
Q  355 tgatttcgtcgtct 368  Q
    | ||||||||||||    
T  27241159 taatttcgtcgtct 27241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 39179939 - 39179838
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||| |||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39179939 aaatcacccctccgaattatttttccttctattctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 39179840  T
Q  370 tg 371  Q
    ||    
T  39179839 tg 39179838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 196 - 360
Target Start/End: Original strand, 43493808 - 43493972
Alignment:
Q  196 ttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttca 295  Q
    ||||||||||  ||| ||||||  | |||| ||||| ||||| ||| |||||||| | |||||||||||  || ||||||||  |||||||||||||||     
T  43493808 ttttcaaacctcagtcgtcacccctctctttttcttctttttagaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattgtttttcc 43493907  T
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 360  Q
    ||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43493908 ttctattctaattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgattt 43493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 178246 - 178115
Alignment:
Q  241 gaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttct 340  Q
    ||||||||||   |||||||||||| || ||||||||  ||||| |||| |||| || |||| |||||||||||||||||||||||||||| ||||||||    
T  178246 gaggtgatttaaggtcaattttgactcaaaaatcacctctccgagttgtgtttccttatatcctaattgaataagtgatttcacatattttatgttttct 178147  T
Q  341 ttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||||||||||||||||||||||||||    
T  178146 ttcgtttgtttttgtgatttcgtcgtctctgc 178115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 245 - 368
Target Start/End: Original strand, 34431045 - 34431168
Alignment:
Q  245 tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcg 344  Q
    |||||| | |||||||||||| || ||||||||| | ||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  34431045 tgatttagggtcaattttgacccaaaaatcacccattcgaattgttttttcttctattttaattgaataagtgatttcacatattttctgttttctttcg 34431144  T
Q  345 tttgtttttgtgatttcgtcgtct 368  Q
    |||| |||||||||||||||||||    
T  34431145 tttgattttgtgatttcgtcgtct 34431168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 241 - 371
Target Start/End: Original strand, 42609125 - 42609255
Alignment:
Q  241 gaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttct 340  Q
    |||||||||| | ||||||||||||  | ||||||| | ||||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||    
T  42609125 gaggtgatttagggtcaattttgacctaaaaatcactcatccgaattgttttttcttctatcctaattgaataagtgatttcacatattttctattttct 42609224  T
Q  341 ttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    || ||||||||||||||||| ||||||||||    
T  42609225 tttgtttgtttttgtgattttgtcgtctctg 42609255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 3740319 - 3740467
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  |||  ||||||| | || ||||||||| || |||||| || || |||||||||| | ||||||| |||||||||||||||||    
T  3740319 ttcttcttcttcttttcagaggtgtgatttagggttaattttgactcaaaaatcatccatctgaattgttttcc-ttctatcctaattgaataagtgatt 3740417  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3740418 tcacatattttctgttttctttcgtttgtttgtgtgatttcgtcgtctct 3740467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 368
Target Start/End: Original strand, 20483147 - 20483294
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataatt-gaataagtgat 319  Q
    ||||||||||| ||||| ||| |||||||| |  ||||||||||| || |||||||||| || ||||||||||| || |||  ||||| |||||||||||    
T  20483147 ttcttcttcttctttttggaggggtgatttaggatcaattttgacccaaaaatcaccct-ccaaattgtttttccttttattctaatttgaataagtgat 20483245  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  20483246 ttcacatattttctgttttgttttgtttgtttttgtgatttcgtcgtct 20483294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 42396639 - 42396522
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || |||||| | || |||||| |||||  ||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  42396639 gtcaattttgacccaaaaatcatcttttcgaattattttttcttctatcttaattgaataagcgatttcacatattttttgttttctttcatttgttttt 42396540  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||    
T  42396539 gtgatttcgtcgtctctg 42396522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 26295218 - 26295067
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||||||  |||| |||||||||||| | |||||||||||  || ||||||||| |||||| |||||||| ||||||| | |||||||||||||||    
T  26295218 ttcttcttcttcattttagagaggtgatttagggtcaattttgatccaaaaatcacccctccgaagtgtttttccttctatccttattgaataagtgatt 26295119  T
Q  321 tcacatattttctgttttctttcgtttgttttt-gtgatttcgtcgtctctg 371  Q
    | ||| ||||||| ||||||||| ||||||||| ||||  ||||||||||||    
T  26295118 taacaaattttctattttctttcttttgtttttagtgagatcgtcgtctctg 26295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 371
Target Start/End: Complemental strand, 3079413 - 3079315
Alignment:
Q  273 tcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||| ||||| ||||||||| || ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  3079413 tcacccctccgatttgtttttccttatatcataattgaataagtgatttaacatattttctgctttttttcgtttgtttttgtgattttgtcgtctctg 3079315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 12891706 - 12891788
Alignment:
Q  290 ttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgttgtctctgc 12891788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 17687215 - 17687317
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||  ||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  17687215 aaatcaccaatccgagttgtttttccttctatcttaattgaataagttatttcacatattttcagttttcttttgtttgtttttgtgatttcgttgtctc 17687314  T
Q  370 tgc 372  Q
    |||    
T  17687315 tgc 17687317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 23882254 - 23882126
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||  || |||||| |  ||| ||||||||||| |||||||  ||||||||||||||||| ||||||||| | |||||| |    
T  23882254 ggtgatttagggtcaattttgattcaaaaatcatcaatccaaattgtttttctttctatccaaattgaataagtgatttgacatattttatattttctat 23882155  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||    
T  23882154 cgtttgtttttgtgatttcgtcgtctctg 23882126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 18653808 - 18653894
Alignment:
Q  286 ttgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||  || |||| |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18653808 ttgttttttcttatatcctaattgaataagtgatttcgtatattttctgatttctttcgtttgtttttgtgatttcgtcgtctctgc 18653894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 39531528 - 39531422
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || |||||| || ||||| ||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  39531528 gtcaattttgaccca-aaatcatccctccgagttgttttcc-ttctatcgtaattgaataagtgatttcacata-tttctgttttcttttgtttgttttt 39531432  T
Q  354 gtgatttcgt 363  Q
    ||||||||||    
T  39531431 gtgatttcgt 39531422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 981186 - 981038
Alignment:
Q  220 tttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    |||||||||||| ||||| ||  |||||||| |  ||||||||||| ||  |||| ||| ||||| ||||||||| ||||||||||||||||  ||||||    
T  981186 tttcttcttcttctttttagaagggtgatttaggatcaattttgacccaataatcgcccctccgagttgtttttccttctatcataattgaacgagtgat 981087  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||  ||   |||||| ||||| |||| ||||| ||||||||||    
T  981086 ttcacatatttaatg---tctttcatttgtatttgcgattttgtcgtctctg 981038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 6682012 - 6681887
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| ||||||| |||| | || ||||||| | | ||| ||||||||| || ||||  ||||||||||||||||||||||||||||    ||||||    
T  6682012 ggtgatttagagtcaaatttggcccaaaaatcactcattcgagttgtttttccttttatctgaattgaataagtgatttcacatattttc--aattcttt 6681915  T
Q  343 cgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||| ||||||| ||||||    
T  6681914 cgtttgtttttgtaatttcgttgtctct 6681887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 371
Target Start/End: Complemental strand, 7771983 - 7771831
Alignment:
Q  201 aaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattcta 300  Q
    ||||||||| ||||||| |||||||||||||   ||| ||| |||||||| | |||||||||||| || ||||||||| ||||||||||||||| ||||     
T  7771983 aaaccctagctgtcacccttttcttcttctt---tttagaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttct- 7771888  T
Q  301 tcataattgaataagtgatttcacata-ttttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
                   |||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  7771887 ---------------tgatttcacatatttttttgttttctttcatttgtttttgtgatttcgtcgtctctg 7771831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 2555419 - 2555360
Alignment:
Q  312 taagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  2555419 taagtgatttcacattttttttgttttctttcgtttgtttttatgatttcgtcgtctctg 2555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 11734892 - 11734829
Alignment:
Q  306 attgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||    
T  11734892 attgaataagtgatttcacatattttct--tttctttagtttgcttttgtgatttcgtcgtctctg 11734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 25961953 - 25962033
Alignment:
Q  288 gtttttcattctatcataattgaataagtgatttc-acatatttt-ctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    ||||||| || |||| ||||| ||||||||||||| ||||||||| | |||||||||| ||||||||||||||||||||||    
T  25961953 gtttttccttatatcctaattaaataagtgatttctacatatttttcagttttctttcctttgtttttgtgatttcgtcgt 25962033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 14534959 - 14535000
Alignment:
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttc 361  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  14534959 ttcacatattttcagttttctttcgtttgtttttgtgatttc 14535000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 25487657 - 25487716
Alignment:
Q  310 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| |||||||||||  | |||||||||||||||| |||||||||||||||    
T  25487657 aataagtgattttcacatattttcattgttctttcgtttgttttcgtgatttcgtcgtct 25487716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 585867 - 585916
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||  | || |||||||||||||||||||||||||||||    
T  585867 tttcacatattttcaatcttatttcgtttgtttttgtgatttcgtcgtct 585916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 7150860 - 7150925
Alignment:
Q  304 taattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||| ||||| |||||||||| || ||| ||||||||||||||||| |||| |||||    
T  7150860 taattgaataagtaatttctacatattttcagtcttccttcgtttgtttttgtgaattcgacgtct 7150925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 371
Target Start/End: Original strand, 23428226 - 23428363
Alignment:
Q  244 gtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattct------atcataattgaat-aagtgatttcacatattttctgtt 336  Q
    ||||||| ||||||||||||||  | |||||| |||||||||||||||||  || |      ||||||||||||| ||| ||||||||||||||| ||||    
T  23428226 gtgatttagagtcaattttgactgaaaaatcaaccttccgaattgttttttttttttttttaatcataattgaataaagggatttcacatattttttgtt 23428325  T
Q  337 tt---ctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||    ||| |||| ||||| | |||||||||||||||    
T  23428326 ttttcgttttgttttttttttttatttcgtcgtctctg 23428363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 26240740 - 26240692
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    |||||||||||||| |||||||||  |||||| ||||||||||||||||    
T  26240740 tttcacatattttcagttttcttttatttgttattgtgatttcgtcgtc 26240692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 26905710 - 26905651
Alignment:
Q  310 aataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||| |||||||||| || ||||||||||||||||| | || |||||||||    
T  26905710 aataagtgatttccacatattttcagtcttctttcgtttgtttttctaatctcgtcgtct 26905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 35276044 - 35276001
Alignment:
Q  325 atattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||| || |||||||||||||||||||||||| |||||||    
T  35276044 atattttcagtcttctttcgtttgtttttgtgattttgtcgtct 35276001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 12215195 - 12215244
Alignment:
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||||||  || |||||||||||| || |||||||||||||||||    
T  12215195 ttcacatatttttagtcttctttcgtttgcttatgtgatttcgtcgtctc 12215244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 32309226 - 32309271
Alignment:
Q  323 acatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||  |||||||||| ||||||||||| ||||||||||||    
T  32309226 acatatttttagttttctttcttttgtttttgtaatttcgtcgtct 32309271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 9e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 15590261 - 15590089
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||| || ||||||||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||||| || |||||||||||  |||    
T  15590261 tcaaaccctagtcgttaccattttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgttttttcttc 15590162  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15590161 tatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgtcgtctctg 15590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 8693853 - 8693667
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||| ||||  |||||| ||||||||||||| ||||| ||| ||||||||   |||||||||||| || ||||||||| ||||||||    
T  8693853 ttctctccttctcaaactctagccgtcacccttttcttcttcttctttttagaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaatt 8693754  T
Q  288 gtttttcattctatcat---aattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| ||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  8693753 gtttttccttctatcctcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtcattttgtcgtctctg 8693667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 221 - 370
Target Start/End: Complemental strand, 12481530 - 12481381
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| |||||||| |  ||||||||||| || ||||||||| ||||| ||||||||| ||||| | |||||||||||||||||    
T  12481530 ttcttcttcttcttgtcagaggggtgatttaggatcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatt 12481431  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12481430 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 12481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 224 - 370
Target Start/End: Complemental strand, 21507965 - 21507819
Alignment:
Q  224 ttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttca 323  Q
    |||||||| ||||| ||| |||||||| | |||||||||||| || | ||||||| ||| ||||||||||| ||||||| || |||||||||||||||||    
T  21507965 ttcttcttctttttagaggggtgatttagggtcaattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttca 21507866  T
Q  324 catattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  21507865 catattttttgttttctttcgtttgtttttgtgattttgtcgtctct 21507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 23654211 - 23654361
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  |||||||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||| | ||| |||||||||||||    
T  23654211 ttcttcttcttcttgtcagagaggtgatttagggtcaattttgacccaaaaatcacccatccgatttgtttttccttctaccttaactgaataagtgatt 23654310  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  23654311 tcacatattttttgttttatttcgtttgtttttgtgatttcgtcgtctctg 23654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 6420018 - 6419868
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| |||||||| | |||||||||||  || ||||||||| || || ||||||||| ||||||| |||||||||||||||||    
T  6420018 ttcttcttcttcttgtcagaggggtgatttagggtcaattttgatccaaaaatcacccctctgagttgtttttccttctatcctaattgaataagtgatt 6419919  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  6419918 tcacatattttttgttttctttcatttgtttttgtgatttcgtcgtctctg 6419868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 2305003 - 2304820
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| ||||||| |||| || | | | |||||||| || || || ||| |||||||| |  || |||||||| || |||||| || || || ||    
T  2305003 ttctctccttctcaaaccttagtcgttatcttcttcttctttttcttgttagaggggtgatttaggatcgattttgacccaaaaatcaaccctctgagtt 2304904  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2304903 gttttcccttctgtcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 2304820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 31937556 - 31937431
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||| ||||||| || ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  31937556 ggtgatttagggtcagttttgacccaaaaatcacccctccgaattgtttttc-ttctatcctaattgaataagtgatttcacatattttctgattt-ttt 31937459  T
Q  343 cgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||||||||||||||||||    
T  31937458 cgtttgtttttgtgatttcgtcgtctct 31937431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 245 - 371
Target Start/End: Complemental strand, 14783307 - 14783181
Alignment:
Q  245 tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcg 344  Q
    |||||| | |||||||||||| || ||||||| | ||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||     
T  14783307 tgatttagggtcaattttgacccaaaaatcacgcctccgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttca 14783208  T
Q  345 tttgtttttgtgatttcgtcgtctctg 371  Q
    ||| |||||||||||||||||||||||    
T  14783207 tttctttttgtgatttcgtcgtctctg 14783181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 19402968 - 19402818
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||  || | |||| |||||||| | |||| ||||||  || ||||||||| |  || ||||||||| || ||||||||||||| ||||||||    
T  19402968 ttcttcttctctttgtctgaggggtgatttcgggtcacttttgatccaaaaatcacccctttgagttgtttttccttgtatcataattgaacaagtgatt 19402869  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19402868 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 19402818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 6296414 - 6296259
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgac--acacaaatcacccttccgaattgttttt-cattctatcataattgaataag 315  Q
    ||||||||||||| ||||| ||| |||||||| |||| |||||||||  | | ||||||  |||||||||||||||| | ||||| | ||||||||||||    
T  6296414 ttttcttcttcttctttttagaggggtgatttagagttaattttgacctaaaaaaatcattcttccgaattgttttttccttctaccctaattgaataag 6296315  T
Q  316 tgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    || |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  6296314 tggtttcacatattttctagtttctttcgtttgtttttgtgatttcgtcgtctctg 6296259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 6303224 - 6303069
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgac--acacaaatcacccttccgaattgttttt-cattctatcataattgaataag 315  Q
    ||||||||||||| ||||| ||| |||||||| |||| |||||||||  | | ||||||  |||||||||||||||| | ||||| | ||||||||||||    
T  6303224 ttttcttcttcttctttttagaggggtgatttagagttaattttgacctaaaaaaatcattcttccgaattgttttttccttctaccctaattgaataag 6303125  T
Q  316 tgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    || |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  6303124 tggtttcacatattttctagtttctttcgtttgtttttgtgatttcgtcgtctctg 6303069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 23638221 - 23638128
Alignment:
Q  278 cttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| | ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23638221 cttccgagtcgtttttccttctacaataattgaataagtgatttcacatattttctgttttctttcgtttgtgtttgtaatttcgtcgtctctg 23638128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 289 - 372
Target Start/End: Complemental strand, 4921973 - 4921890
Alignment:
Q  289 tttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  4921973 tttttccttctatcttaattgaataagtgatttcacatattttcagttttatttcgtttgtttttgtgattttgtcgtctctgc 4921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 366
Target Start/End: Complemental strand, 35220063 - 35219920
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || || ||| |||||||| | |||||||||||| || ||||||||| ||| | ||||||| | |||||||  ||| |||||||||||     
T  35220063 ttcttcttcttcttcttggaggggtgatttagggtcaattttgactcaaaaatcacccctccaagttgttttcc-ttctatccgaatcgaataagtgata 35219965  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||    
T  35219964 tcacatattttctgttttcttttgtttg-ttttgtgatttcgtcgt 35219920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 270 - 372
Target Start/End: Original strand, 4393780 - 4393882
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||| || || ||||||| | ||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  4393780 aaatcacccctctgagttgttttaccttctatcctaatagaacaagtgatttcacatattttcttttttctttcgtttgtttttgtgatttcatggtctc 4393879  T
Q  370 tgc 372  Q
    |||    
T  4393880 tgc 4393882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 29927163 - 29927105
Alignment:
Q  312 taagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  29927163 taagtgatttcacaaattttctgttttctttcgtttgtttttgtgattttgtcgtctct 29927105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 31705209 - 31705276
Alignment:
Q  304 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| | |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  31705209 taattgaataaataatttcacatattttctattttcttccgtttgcttttgtgatttcgtcgtctctg 31705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 304
Target Start/End: Original strand, 4084945 - 4085062
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcacc-attttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaat 286  Q
    |||||| ||| ||||||||||||||||||| | |||||| ||||| || |  ||| |||||||| | ||||||||||||  | |||||| ||||||||||    
T  4084945 ttctctgcttctcaaaccctagttgtcacccactttctttttctttttctgagaggggtgatttagggtcaattttgaccgaaaaatcatccttccgaat 4085044  T
Q  287 tgtttttcattctatcat 304  Q
    |||||||| |||||||||    
T  4085045 tgtttttccttctatcat 4085062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 31937629 - 31937563
Alignment:
Q  283 gaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtt 350  Q
    |||||||||||   |||||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  31937629 gaattgttttttcatctatcctaattgaataagtgatttaacatattttctgtttt-tttcgtttgtt 31937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 15175807 - 15175920
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga--tttcacatattttctgttttctttcgtttgttt 351  Q
    |||||||||||| || ||||||||| |||||| |||||||| ||||||  || || |||||||||  ||||| ||||||||   |||||||||||||  |    
T  15175807 gtcaattttgaccca-aaatcacccctccgaaatgtttttctttctattttacttaaataagtgatttttcaaatattttcaaatttctttcgtttg--t 15175903  T
Q  352 ttgtgatttcgtcgtct 368  Q
    |||||||||||||||||    
T  15175904 ttgtgatttcgtcgtct 15175920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 20028769 - 20028711
Alignment:
Q  310 aataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||| || ||||||||||| || || |||||||||||||||||||||||||||||    
T  20028769 aataagtgtttacacatattttccgtcttatttcgtttgtttttgtgatttcgtcgtct 20028711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 31801293 - 31801243
Alignment:
Q  318 atttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  31801293 atttcacatattttcagttttcttttgtttgttgttgtgatttcgtcgtct 31801243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 15057725 - 15057774
Alignment:
Q  304 taattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  15057725 taattgaatacgtgatttcacatattttctgttttctttcatctgttttt 15057774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 2488169 - 2488250
Alignment:
Q  291 tttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||| ||||||| |||| ||||||||||||| ||| |||||||  |||||||||||||| |||||| ||||||| ||||||||    
T  2488169 tttccttctatcctaatcgaataagtgatttccacgtattttcatttttctttcgtttg-ttttgtaatttcgttgtctctgc 2488250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 8508202 - 8508251
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||   |||||||||| |||||||||||||||||||||||    
T  8508202 tttcacatatttttaattttctttcgattgtttttgtgatttcgtcgtct 8508251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 15470361 - 15470248
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga--tttcacatattttctgttttctttcgtttgttt 351  Q
    |||||||||||| || ||||||||| || ||| |||||||| ||||||  || || |||||||||  ||||| ||||||||   |||||||||||||  |    
T  15470361 gtcaattttgaccca-aaatcacccctctgaaatgtttttctttctattttacttaaataagtgatttttcaaatattttcaaatttctttcgtttg--t 15470265  T
Q  352 ttgtgatttcgtcgtct 368  Q
    |||||||||| ||||||    
T  15470264 ttgtgatttcatcgtct 15470248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 7870247 - 7870280
Alignment:
Q  335 ttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||||||||||||| ||||    
T  7870247 ttttctttcgtttgtttttgtgatttcgttgtct 7870280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 9044152 - 9044099
Alignment:
Q  310 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcg 362  Q
    |||||||||||| ||||||||||| |||||  ||| ||||||||||||||||||    
T  9044152 aataagtgattttcacatattttcagtttttattcatttgtttttgtgatttcg 9044099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 24791358 - 24791186
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    ||||| ||||||||||||| ||||||||||||| ||||| ||| ||||||||   |||||||||||| || |||||| || ||||||||||||||| ||     
T  24791358 tcaaatcctagttgtcacccttttcttcttcttctttttagaggggtgatttatggtcaattttgacccaaaaatcatccatccgaattgtttttcctta 24791259  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24791258 tatcctaattcaataagtgatttaacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 24791186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 9501517 - 9501701
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||  |||| | ||||||||||||| |||||  || |||||||| | |||||||||||  || ||||||||| || |||||    
T  9501517 ttctctccttctcaaaccctagccgtcatccttttcttcttcttctttttaaagtggtgatttagggtcaattttgatccaaaaatcacccatctgaatt 9501616  T
Q  288 gttttt-cattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9501617 gttttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 9501701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 30027026 - 30026898
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||| ||||||| || ||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  30027026 ggtgatttagggtcatttttgacccaaaaatcacccatccgagttgttttttcttctatcataattgaataagtgatttcacatattttctgttttcttt 30026927  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||    
T  30026926 cgtttgtttttgtgatttcgtcgtctctg 30026898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 219 - 371
Target Start/End: Original strand, 37612612 - 37612764
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga 318  Q
    |||| |||||||| ||||| ||| |||||||| | |||||||||||| || ||||||||| |||||||| |||||| ||||||| || ||||||||||||    
T  37612612 tttttttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattttttttccttctatcctagttgaataagtga 37612711  T
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  37612712 tttcacatattttttattttctttcgtttgtttttgtgatttcgtcgtctctg 37612764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 31202419 - 31202569
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||| ||  ||||||||   |||||||||||| || |||||| || ||| ||||||||||| |||||| ||||||||||||||||||    
T  31202419 ttcttcttcttctttttagatgggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatt 31202518  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31202519 tcacatattttctgttttgtttcgtttgtttttgtgatttcgtcgtctctg 31202569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 31407916 - 31407766
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||| ||| |||||||| | |||||||||||| || |||||| |  ||||||||||||||| |||||||||| |||||||| |||||    
T  31407916 ttcttcttcttatttttagaggggtgatttagggtcaattttgacccaaaaatcatctctccgaattgtttttccttctatcatagttgaataaatgatt 31407817  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  31407816 tcacatattttttgttttctttcgtttgtttttatgatttcgtcgtctctg 31407766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 14600866 - 14600719
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||| || || || |||||||||||| | |||||||||||| || |||||| || ||||| ||||||||  ||||||| ||||||||||| |||||    
T  14600866 ttcttctttttcttgttagagaggtgatttagggtcaattttgacccaaaaatcatccatccgagttgttttttcttctatcctaattgaataactgatt 14600767  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14600766 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 14600719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 39067857 - 39067710
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| ||||||||   |||||||||||| || |||||||  |||| ||||||||||| ||||||| ||||| |||||||||||    
T  39067857 ttcttcttcttcttttaagaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattgtttttccttctatcctaatttaataagtgatt 39067758  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39067757 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 39067710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 254 - 368
Target Start/End: Complemental strand, 10338957 - 10338843
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10338957 gtcaattttgacgcaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttttgttttctttcgtttgttttt 10338858  T
Q  354 gtgatttcgtcgtct 368  Q
    |||||||||||||||    
T  10338857 gtgatttcgtcgtct 10338843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 12329609 - 12329738
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| |||||||||||||  || |||||||| || ||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  12329609 ggtgatttagagtcaattttgatccaaaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttcttt 12329708  T
Q  343 cg-tttgtttttgtgatttcgtcgtctctg 371  Q
    || |||||||||||||||||||||||||||    
T  12329709 cgttttgtttttgtgatttcgtcgtctctg 12329738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 370
Target Start/End: Original strand, 41361726 - 41361842
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||||| ||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41361726 gtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttcacatattttctgttttctttcgtttgttttt 41361825  T
Q  354 gtgatttcgtcgtctct 370  Q
    ||||||| |||||||||    
T  41361826 gtgatttggtcgtctct 41361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 371
Target Start/End: Complemental strand, 1810405 - 1810238
Alignment:
Q  200 caaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattct 299  Q
    ||||||||||| |||||| |||||||||||||   ||| ||| |||||||| | |||||||||||| || ||||||||| ||||| || |||||| ||||    
T  1810405 caaaccctagtcgtcacccttttcttcttctt---tttagaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttttttttc-ttct 1810310  T
Q  300 atcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||||    
T  1810309 atcctaattcaataagtgatttcacattttttctgatttctttcgtttgtttttgtgatttcctcgtatctg 1810238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 2234602 - 2234488
Alignment:
Q  257 aattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtg 356  Q
    ||||||||  || ||||||||| | ||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2234602 aattttgatccaaaaatcaccccttcgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtg 2234503  T
Q  357 atttcgtcgtctctg 371  Q
    |||||||||||||||    
T  2234502 atttcgtcgtctctg 2234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 2025378 - 2025227
Alignment:
Q  220 tttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    |||||||||||| || || ||| ||||||||   ||||||||||||  | ||||||||||||| | ||||||||| || |||  ||||||||||||||||    
T  2025378 tttcttcttcttcttgttagaggggtgatttatggtcaattttgaccaaaaaatcacccttccaagttgtttttccttttattctaattgaataagtgat 2025279  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  2025278 ttcacatgttttctgttttatttcgtttatttttgtgatttcgtcgtctctg 2025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 245 - 371
Target Start/End: Complemental strand, 3204899 - 3204774
Alignment:
Q  245 tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcg 344  Q
    |||||| |||||||||||||| || |||| ||||| ||||||||||||||  |||||  ||||| ||| |||||||||||||||||||||||||||||||    
T  3204899 tgatttagagtcaattttgacccaaaaattaccct-ccgaattgtttttccatctattctaatttaatgagtgatttcacatattttctgttttctttcg 3204801  T
Q  345 tttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| |||||||||||||||||||    
T  3204800 tttgtttatgtgatttcgtcgtctctg 3204774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 280 - 370
Target Start/End: Original strand, 31308168 - 31308258
Alignment:
Q  280 tccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31308168 tccgagttgtttttccttctatcctaattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctct 31308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 11161843 - 11161991
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || || ||| ||| |||| | |||||||||||| || ||||||||| | | | ||||||||| || |||| ||||||||||||| |||    
T  11161843 ttcttcttcttcttgttagaggggtaatttagggtcaattttgacccaaaaatcaccccttcaagttgtttttctttatatcctaattgaataagtcatt 11161942  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  11161943 tcacatcttttcagttttctttcgtttgtttttgtgatttcgtcgtctc 11161991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 37128600 - 37128505
Alignment:
Q  275 acccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  37128600 acccatccgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtaatttcgtcgtctct 37128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 7579945 - 7579873
Alignment:
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7579945 tatcttaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 7579873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 243 - 362
Target Start/End: Complemental strand, 13570872 - 13570753
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| |||||||||||||   | ||||||  | ||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |||    
T  13570872 ggtgatttagagtcaattttgatctaaaaatcattcatcccaattgtttttcattctatcctaattaaataagtgatttcacatattttctatttttttt 13570773  T
Q  343 cgtttgtttttgtgatttcg 362  Q
    ||||||||||||||||||||    
T  13570772 cgtttgtttttgtgatttcg 13570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 23971262 - 23971114
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||| || || || ||||||||||||  ||| |||||||||  | ||||||| | ||||| ||||||||| ||||||  |||||||||||||||||    
T  23971262 ttcttctttttcttgttagagaggtgatttaaagtaaattttgaccaaaaaatcactcatccgagttgtttttccttctattctaattgaataagtgatt 23971163  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  23971162 tcacatattttatgttttctttcgtttg--tttgtgattttgtcgtctctg 23971114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 221 - 370
Target Start/End: Original strand, 10147907 - 10148057
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttca-ttctatcataattgaataagtgat 319  Q
    |||||||||||  | || ||| |||||||| | |||||||||||| ||  |||||||| ||||| ||||||||   ||||||| ||||||||||||||||    
T  10147907 ttcttcttcttcatgttagaggggtgatttagggtcaattttgacccaataatcacccctccgagttgtttttttcttctatcctaattgaataagtgat 10148006  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  10148007 ttcacatattttctgtttcctttcgtttgtttttgagattatgtcgtctct 10148057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 371
Target Start/End: Complemental strand, 1040062 - 1039912
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga 318  Q
    ||||||||||||| ||||| ||| | ||||||   |||||||||||  || ||||||||| ||||||||| ||||| ||||||  ||||| |||||||||    
T  1040062 ttttcttcttcttctttttagag-gatgatttaaggtcaattttgatccaaaaatcacccatccgaattggttttccttctattctaattcaataagtga 1039964  T
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  1039963 tttcacatattttctgctttctttcatttg-ttttgtgattttgtcgtctctg 1039912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 15288926 - 15288823
Alignment:
Q  261 ttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 360  Q
    ||||| || |||||| || | ||||||||||||| ||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  15288926 ttgactcaaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcacttattttctgttttctttcgtttgtttttgtgattt 15288827  T
Q  361 cgtc 364  Q
    ||||    
T  15288826 cgtc 15288823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 15469295 - 15469192
Alignment:
Q  261 ttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattt 360  Q
    ||||| || |||||| || | ||||||||||||| ||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  15469295 ttgactcaaaaatcatcccttcgaattgtttttctttctatcctaattaaatacgtgatttcacttattttctgttttctttcgtttgtttttgtgattt 15469196  T
Q  361 cgtc 364  Q
    ||||    
T  15469195 cgtc 15469192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 24699813 - 24699943
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcat--tctatcataattgaataagtgatttcacatattttctgttttct 340  Q
    |||||||| | |||||||||||| || ||||||||| |||||  |||||||  |  | |||| ||||| |||||||||||||||||||||||||||||||    
T  24699813 ggtgatttagggtcaattttgacccaaaaatcacccatccgagatgttttttttcttatatcctaattaaataagtgatttcacatattttctgttttct 24699912  T
Q  341 ttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||| |||| |||||| |||||||||||||||    
T  24699913 ttcatttgcttttgtaatttcgtcgtctctg 24699943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 4757191 - 4757276
Alignment:
Q  286 ttgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||    
T  4757191 ttgtttttccttctatcataattaaataaatgatttcacatattttctgttttctttcatttctttttaagatttcgtcgtctctg 4757276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 296 - 371
Target Start/End: Original strand, 22787528 - 22787603
Alignment:
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22787528 ttctatcctagttgaataagtgatttaacatattttctgttttctttcgtttgtttttgtgattccgtcgtttctg 22787603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 32779069 - 32778973
Alignment:
Q  271 aatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    |||||||| | ||| ||||||||| || |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  32779069 aatcaccccttcgagttgtttttccttatatcataattaaataagagatttccacatattttcagttttctttcgtttatttttgtgatttcgtcgt 32778973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 2968551 - 2968644
Alignment:
Q  280 tccgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||| ||||||||| || |||  ||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  2968551 tccgagttgtttttctttatattctaattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtgattttgtcgtctctgc 2968644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 372
Target Start/End: Complemental strand, 30039466 - 30039354
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttt 352  Q
    |||||||||||| || ||||||| | ||||||||||||||| |||| |  |||||||||| |||||||| |||||||||      |||||||||||||||    
T  30039466 gtcaattttgaccca-aaatcactcatccgaattgtttttccttcttttctaattgaatatgtgatttccacatatttt------tctttcgtttgtttt 30039374  T
Q  353 tgtgatttcgtcgtctctgc 372  Q
    ||||||||||||||||||||    
T  30039373 tgtgatttcgtcgtctctgc 30039354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 28297227 - 28297124
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatatttt--ctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    ||||||||  ||||| ||||||||| |||| |  ||||||||| |||||||||| |||| ||  |  ||||||||||| |||||||||||||||||||||    
T  28297227 aaatcaccgctccgagttgtttttccttcttttctaattgaattagtgatttcatatatatttaccattttctttcgtctgtttttgtgatttcgtcgtc 28297128  T
Q  368 tctg 371  Q
    ||||    
T  28297127 tctg 28297124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 368
Target Start/End: Original strand, 7281655 - 7281756
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgattt-cacatattttct--gttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    ||||||||| ||||||||||||||| |||| |  || ||||||||||||||| || ||||||| |   | ||||||||||||||||||||||||| ||||    
T  7281655 aaatcacccatccgaattgtttttctttcttttctagttgaataagtgatttccatatatttttttattgttctttcgtttgtttttgtgatttcatcgt 7281754  T
Q  367 ct 368  Q
    ||    
T  7281755 ct 7281756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 364
Target Start/End: Original strand, 10334153 - 10334279
Alignment:
Q  239 gagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacata-ttttctgttt 337  Q
    ||||| |||||| | |||||||||||  || ||||||| | |  || ||||||||| ||||||| ||||| ||||||||| |||| ||| |||||  |||    
T  10334153 gagagatgatttagggtcaattttgatccaaaaatcactcatatgagttgtttttccttctatcctaattaaataagtgagttcatatatttttcaattt 10334252  T
Q  338 tctttcgtttgtttttgtgatttcgtc 364  Q
    ||||| ||||||||| |||||||||||    
T  10334253 tcttttgtttgttttagtgatttcgtc 10334279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 322 - 369
Target Start/End: Complemental strand, 13576254 - 13576207
Alignment:
Q  322 cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  13576254 cacatattttcagttttctttcgtttattttggtgattttgtcgtctc 13576207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 42260984 - 42261043
Alignment:
Q  310 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| ||||||||||   |||||||||||||||||| |||||||| ||||||    
T  42260984 aataagtgattttcacatatttttgattttctttcgtttgttttggtgatttcatcgtct 42261043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 188 - 368
Target Start/End: Original strand, 22757022 - 22757202
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||  |||||| ||||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||||  ||||||||    
T  22757022 ttctctccttctcaaaccctagccgtcacccttttcttcttcttcttttcagaggggtgatttagggtcaattttgactcaaaaatcaccactccgaatt 22757121  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  22757122 gtttttccttctatcctaattgaataagtgatttcacatattttatgttttttttcgtttgtttttgtgatttcgtcgtct 22757202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 43244563 - 43244391
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||  |||| | ||||||||||||| ||||| ||| |||||||| | |||||||||||| || ||||||||| || |||||||||||| |||    
T  43244563 tcaaaccctagccgtcatccttttcttcttcttttttttagaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttccttc 43244464  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  43244463 tatcctaattgaataagtgatttcacatattttcgattttctttcgtttgtttttgtgattttgtcgtctctg 43244391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 188 - 371
Target Start/End: Complemental strand, 20400099 - 20399913
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccatttt---cttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| ||||||||||||||||||| ||||   ||||||||| ||||| ||  || ||||| | |||||||||||| || |||||||||  ||||    
T  20400099 ttctctccttctcaaaccctagttgtcaccttttttttcttcttcttctttttagaagggcgatttagggtcaattttgacccaaaaatcacccacccga 20400000  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||  ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20399999 attgctttttcttctatcctaattgaataagtgatttcatatattttctgttttctttcgtttatttttgtgatttcgtcgtctctg 20399913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 394450 - 394284
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    ||||||||||||||||||| |||||||||| |||      ||| |||||||| | |||||||||||| || ||||||||| ||||||||||||||| |||    
T  394450 tcaaaccctagttgtcacccttttcttctttttg------gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttc 394357  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||| ||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||    
T  394356 tatcctaattcaataagtgatttcacatcttttctgctttctttcgtttgtttctatgatttcgtcgtctctg 394284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 199 - 371
Target Start/End: Complemental strand, 7083997 - 7083826
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||| |||||| ||| ||||||||| ||||  ||  | | |||| | |||||||||||  || ||||||||| |  |||||||||||| |||    
T  7083997 tcaaaccctagtcgtcacccttt-cttcttcttcttttcagatggataatttagggtcaattttgatccaaaaatcacccctatgaattgtttttccttc 7083899  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7083898 tatcataattgaataagtgatttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctctg 7083826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 25658092 - 25658278
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttct---tcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| |||||||||||  |||||| ||||||   ||||||| ||||| ||| |||||||| | || ||||||||| || ||||||||  ||| |    
T  25658092 ttctctccttctcaaaccctagccgtcacccttttcttcttcttcttctttttagaggggtgatttagggttaattttgactcaaaaatcacctctccaa 25658191  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25658192 attgtttttccttctttcctaatttaataagtgatttcacatattttctgttttctttcgtatgtttttgtgatttcgtcgtctctg 25658278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 26742623 - 26742476
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||| ||||| ||||| ||  |||||||| |  ||||||||||| || ||||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  26742623 ttctttttcttctttttagatgggtgatttaggatcaattttgacccaaaaatcacccatccgaattgtttttctttctatcttaattgaataagtgatt 26742524  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  26742523 tcacatattttctgttttctttcgtttgttttcgtgattttgtcgtct 26742476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 220 - 370
Target Start/End: Original strand, 6911640 - 6911790
Alignment:
Q  220 tttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    |||||||||||| || || ||| |||||||| | |||||||||||  || ||||||||  ||||| ||||||||| ||||| | ||||||||||||||||    
T  6911640 tttcttcttcttcttgttagaggggtgatttagggtcaattttgatccaaaaatcacctctccgatttgtttttccttctaccttaattgaataagtgat 6911739  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6911740 ttcacatattttctgttttctttcgtttgtttttgtgatttcttcgtctct 6911790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 7060318 - 7060432
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    ||||||||| || || ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7060318 gtcaattttaacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttcacatattttatgttttctttcgtttgttttt 7060417  T
Q  354 gtgatttcgtcgtct 368  Q
    |||||||||||||||    
T  7060418 gtgatttcgtcgtct 7060432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 245 - 371
Target Start/End: Original strand, 13965545 - 13965671
Alignment:
Q  245 tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcg 344  Q
    |||||| | |||||||||||| || ||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  13965545 tgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcctaattgaataagtgatttcacatattctatgttttctttcg 13965644  T
Q  345 tttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||    
T  13965645 tttgtttttgtgatttcgtcgtctctg 13965671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 24568873 - 24568723
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| |||||||| | || ||||||||| || |||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  24568873 ttcttcttcttcttttcagaggggtgatttagggtgaattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgatt 24568774  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  24568773 ttacatattatctgttttatttcgtttgtttttgtgatttcgtcgtatctg 24568723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 29268904 - 29268787
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| |  ||||||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29268904 gtcaattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgttttt 29268805  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||    
T  29268804 gtgatttcgtcgtctctg 29268787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 188 - 364
Target Start/End: Original strand, 39837522 - 39837699
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||| ||||| |||||| ||||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||||| | ||| ||    
T  39837522 ttctctccttctcaaacactagtcgtcacccttttcttcttcttcttttcagaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgattt 39837621  T
Q  288 gtttttca-ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtc 364  Q
     ||||||  || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39837622 ttttttcccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttttgatttcgtc 39837699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 221 - 368
Target Start/End: Original strand, 24825610 - 24825757
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || || ||| |||||||| |  |||||||||||  | ||||||| | ||||| ||||||||| ||||||| |||||||||||||||||    
T  24825610 ttcttcttcttcttgttagaggggtgatttaggatcaattttgacctaaaaatcactcctccgagttgtttttccttctatcctaattgaataagtgatt 24825709  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24825710 tcacatattttctattttctttcgtttgtttttgtgatttcgtcgtct 24825757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 200 - 371
Target Start/End: Original strand, 26674309 - 26674483
Alignment:
Q  200 caaaccctagttgtcaccattttcttcttcttgtt-ttttgaga--ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcat 296  Q
    ||||| |||| |||||||  |||||||||||| || |||| |||  |||||||| |  |||||||||||  | ||||||||| ||| ||||| ||||| |    
T  26674309 caaactctagatgtcacccctttcttcttcttcttcttttcagatgggtgatttaggatcaattttgacctaaaaatcacccctccaaattgcttttcct 26674408  T
Q  297 tctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26674409 tctatcataattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcatctctg 26674483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 8712491 - 8712641
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| |||||  || |||||||| | |||||||||||| || ||||||||| ||  ||||||||||| ||||||| || |||| |||||||||    
T  8712491 ttcttcttcttctttttacaggggtgatttagggtcaattttgacccaaaaatcacccctcataattgtttttccttctatcctagttgagtaagtgatt 8712590  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  8712591 tcacatattttttgttttctttcgtttgtttttgtgatttcgtcatctctg 8712641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 11210473 - 11210323
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||| | ||| |||||||| | |||||||||| |  | ||||||||| |||||||| |||||| | | |||||||||||||||||||||    
T  11210473 ttcttcttcttctttgtagaggggtgatttagggtcaattttgccctaaaaatcacccctccgaattatttttcctcccatcataattgaataagtgatt 11210374  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  11210373 tcacatatttactcttttctttcgtttgtttttgtgatttcgtcgtctctg 11210323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 27394791 - 27394941
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||   || |||||||| | |||||||||||| || |||||||||||||| ||| |||||| ||||||| ||||||||||||| |||    
T  27394791 ttcttcttcttcttttcacaggggtgatttagggtcaattttgacccaaaaatcacccttccggattatttttccttctatcctaattgaataagtaatt 27394890  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    | | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  27394891 taaaatattttatgttttctttcgtttgtttttgtgatttcgtcgtctctg 27394941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 254 - 372
Target Start/End: Complemental strand, 44757169 - 44757051
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||||| | ||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44757169 gtcaattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttcacatattttatgttttctttcgtttgttttt 44757070  T
Q  354 gtgatttcgtcgtctctgc 372  Q
     ||||||||||||||||||    
T  44757069 atgatttcgtcgtctctgc 44757051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 30201999 - 30202149
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| ||||||||   |||||||||||  || ||||||||| | | | ||||||||| || |||| |||||||||||||||||    
T  30201999 ttcttcttcttcttgtcagaggggtgatttaaggtcaattttgatccaaaaatcaccccttctagttgtttttccttttatcttaattgaataagtgatt 30202098  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30202099 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 30202149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 371
Target Start/End: Original strand, 29922761 - 29922948
Alignment:
Q  187 tttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaat 286  Q
    ||||||||||| |||||||||||  ||||||  |||||||||||| || |  |||||||||||| | ||||||||||||  |  |||||||| ||| | |    
T  29922761 tttctcttcttctcaaaccctagccgtcacccctttcttcttcttcttgtcagagaggtgatttagggtcaattttgacctaataatcacccctccaagt 29922860  T
Q  287 tg---tttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||   |||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||    
T  29922861 tgttttttttctttctatcctaattgaataagtgatttcacatattttctatttcctttcgtctgtttttgtgattttgtcgtctctg 29922948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 38944274 - 38944158
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||| | || ||||||||| ||| ||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  38944274 gtcaattttggcccaaaaatcacccctccaaattgtttttccttctatcgtagttgaataagtgatttcacatatttt-tgttttctttcgtttgttttt 38944176  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||    
T  38944175 gtgatttcgtcgtctctg 38944158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 221 - 368
Target Start/End: Original strand, 24100099 - 24100249
Alignment:
Q  221 ttcttcttcttgtttttt-gagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    ||||||||||| |||||| ||| |||||||| |  ||||||||||  || |||| |||| ||||||||||||||| ||||||| ||||||||||||||||    
T  24100099 ttcttcttctttttttttagaggggtgatttaggatcaattttgaaccaaaaattacccatccgaattgtttttccttctatcgtaattgaataagtgat 24100198  T
Q  320 ttcacatattt--tctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||  ||||||||||||||||||||||||  ||||||||||||    
T  24100199 ttcacatattttctctgttttctttcgtttgtttttgcaatttcgtcgtct 24100249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 12717281 - 12717129
Alignment:
Q  219 ttttcttcttcttgttttttga--gaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagt 316  Q
    ||||||||||||||| | ||||  |||||||||| |||||||||||||| || |||||| || ||||| ||||||||  ||||||| ||||| |||||||    
T  12717281 ttttcttcttcttgtctattgaaagaggtgatttagagtcaattttgaccca-aaatcatccgtccgacttgttttttcttctatcctaattaaataagt 12717183  T
Q  317 gatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    |||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  12717182 gatttccacatattttcagttttctttcgtttgtttttgtgatttcttcgtctc 12717129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 188 - 363
Target Start/End: Complemental strand, 478201 - 478030
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||  ||||||  ||||||||||||   ||| ||| ||||||||   |||||||||||| || |||||||| | |||||||    
T  478201 ttctctccttctcaaaccctagccgtcacccctttcttcttctt---tttagaggggtgatttatggtcaattttgacccaaaaatcaccat-ccgaatt 478106  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgt 363  Q
    ||||||| || |||| |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  478105 gtttttccttatatcctaattgaataagtgattttacatattttctgtttcctttcgtttatttttgtgatttcgt 478030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 5814310 - 5814459
Alignment:
Q  223 cttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc 322  Q
    ||||||||| || || | |||||||||| | |||||||||||  || |||||| || ||| | ||||||| | ||||||| ||||||||||||| |||||    
T  5814310 cttcttcttcttgttagggaggtgatttagggtcaattttgatccaaaaatcatccctccaagttgttttcccttctatcttaattgaataagttatttc 5814409  T
Q  323 acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||    
T  5814410 acatatttttagttttctttcgtttgtttttgtgatttcgtcgtctctgc 5814459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 6881966 - 6882067
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||| | ||| || |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6881966 aaatcaccccttcgagttatttttccttctatcctaattaaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 6882065  T
Q  370 tg 371  Q
    ||    
T  6882066 tg 6882067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 43493394 - 43493297
Alignment:
Q  274 cacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  43493394 cacccctccgaattgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttcgtcgtctctg 43493297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 51152119 - 51152235
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||| ||||| || ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  51152119 gtcaatattgacccaaaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttcacatattttctgctttctttcgtttg-tttt 51152217  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||| ||||||    
T  51152218 gtgatttcgtcatctctg 51152235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 7861343 - 7861216
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| || ||||||||||| || ||||||||  || ||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||    
T  7861343 ggtgatttagaatcaattttgacccaaaaatcaccactctgaattatttttccttctatcctaattaaataagtgatttcacatattttctgtttt-ttt 7861245  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    | |||||||||||||||||||||||||||    
T  7861244 catttgtttttgtgatttcgtcgtctctg 7861216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 352
Target Start/End: Original strand, 31521910 - 31522074
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaatt 287  Q
    |||||| ||| |||||||||||| ||  || ||||||| ||||| ||||   || |||||||| | ||||||||||||  | ||||||||| ||||||||    
T  31521910 ttctctccttctcaaaccctagtcgtggcccttttcttgttcttcttttcaaaggggtgatttagggtcaattttgacctaaaaatcacccctccgaatt 31522009  T
Q  288 gtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttt 352  Q
    ||||||| ||||||| |||||||||||||||||||||||||| | |||||||||| |||||||||    
T  31522010 gtttttccttctatcctaattgaataagtgatttcacatattctttgttttctttagtttgtttt 31522074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 626671 - 626566
Alignment:
Q  257 aattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtg 356  Q
    ||||||||| || ||||||||| || ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  626671 aattttgacccaaaaatcacccatctgaattatttttc-ttctatcataattgaataagtgatt-cacatattttctgttttctttcgtttgtttttgtg 626574  T
Q  357 atttcgtc 364  Q
    ||||||||    
T  626573 atttcgtc 626566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 280 - 371
Target Start/End: Original strand, 50801237 - 50801328
Alignment:
Q  280 tccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||| |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50801237 tccgaattatttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctg 50801328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 20887882 - 20887766
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||||| |||||||| || ||  ||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  20887882 gtcaattttgacccaaaaatcacccatccgaattattattttttctatcttaattcaataagtgatttcacat-ttttctgctttctttcgtttgttttt 20887784  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||    
T  20887783 gtgatttcgtcgtctctg 20887766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 45351199 - 45351080
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgttttt-cattctatcataatt-gaataagtgatttcacatattttctgttttctttcgtttgttt 351  Q
    |||||||||||  || ||||||||| |||||||||||||| | || |||  ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  45351199 gtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacatattttctgttttgtttcgtttgttt 45351100  T
Q  352 ttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||    
T  45351099 ttgtgatttcgtcgtctctg 45351080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 45360678 - 45360559
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgttttt-cattctatcataatt-gaataagtgatttcacatattttctgttttctttcgtttgttt 351  Q
    |||||||||||  || ||||||||| |||||||||||||| | || |||  ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  45360678 gtcaattttgatccaaaaatcacccctccgaattgttttttccttttattctaatttgaataagtgatttcacatattttctgttttgtttcgtttgttt 45360579  T
Q  352 ttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||    
T  45360578 ttgtgatttcgtcgtctctg 45360559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 19745384 - 19745501
Alignment:
Q  255 tcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttg-ttttt 353  Q
    ||||||||||| || ||||||  | ||||||||||||||  || |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  19745384 tcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacatattttctgttttctttcgtttgtttttt 19745483  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||| ||||||||||    
T  19745484 gtgatttagtcgtctctg 19745501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 19794422 - 19794305
Alignment:
Q  255 tcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgt-tttt 353  Q
    ||||||||||| || ||||||  | ||||||||||||||  || |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  19794422 tcaattttgacccaaaaatcattcatccgaattgtttttgcttttatcctaattgaataattgatttcacatattttctgttttctttcgtttgtttttt 19794323  T
Q  354 gtgatttcgtcgtctctg 371  Q
    ||||||| ||||||||||    
T  19794322 gtgatttagtcgtctctg 19794305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 284 - 371
Target Start/End: Original strand, 39523433 - 39523520
Alignment:
Q  284 aattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  39523433 aattgtttttccttttatcctaattgaataagtgatttcacatgttttctgttttctttcgtttgtttttatgatttcgtcatctctg 39523520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 243 - 372
Target Start/End: Complemental strand, 22049542 - 22049413
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttctt 341  Q
    |||||||| | || ||||||||| || ||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  22049542 ggtgatttagggttaattttgaccca-aaatcaccctttcgaattgtttttccttctatcctaattgaataagtgatttccacatattttcagttttctt 22049444  T
Q  342 tcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    || ||| ||||| || |||||| ||||||||    
T  22049443 tcatttatttttatggtttcgttgtctctgc 22049413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 8517533 - 8517466
Alignment:
Q  304 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8517533 taattgaataagtgattttacatattttctgttttctttcgtttgtttttgtgatttcgccgtctctg 8517466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 36124471 - 36124359
Alignment:
Q  257 aattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtg 356  Q
    ||||||||  || ||||||| | ||| ||||||||||| | ||||| ||||||||| | ||||||||||||||||  |||||||||||||||||||||||    
T  36124471 aattttgatccaaaaatcactcatcccaattgtttttcctcctatcttaattgaatgattgatttcacatatttt--gttttctttcgtttgtttttgtg 36124374  T
Q  357 atttcgtcgtctctg 371  Q
    |||||||||||||||    
T  36124373 atttcgtcgtctctg 36124359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 371
Target Start/End: Complemental strand, 13586343 - 13586250
Alignment:
Q  279 ttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctg-ttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||||||||  || |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  13586343 ttccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtttttttttcgtttgtttttgtgatttcgtcatctctg 13586250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 24611884 - 24611809
Alignment:
Q  296 ttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||||||    
T  24611884 ttctatcctaattgaataagtgatttcacatattttctattttttttcgtttgcttttgtgatttcgacgtctctg 24611809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 368
Target Start/End: Original strand, 2447810 - 2447908
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||| | |||||| |||||  ||||||| |||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||| ||||||    
T  2447810 aaatcaccccttcgaattatttttttttctatcctaattgaataagtgatttcacataatttatgttttcattagtttgtttttgtgatttcttcgtct 2447908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 42197536 - 42197665
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | || |||||||||| | |||||||  ||||||||| |||||| ||||||| ||||| ||||||||| ||||| |||||| |||||| |||    
T  42197536 ggtgatttagggttaattttgacaaaaaaatcact-ttccgaattatttttccttctatcctaatttaataagtgacttcacgtattttttgtttttttt 42197634  T
Q  343 --cgtttgtttttgtgatttcgtcgtctctg 371  Q
      | |||||||||||||||||||||||||||    
T  42197635 ttcatttgtttttgtgatttcgtcgtctctg 42197665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 270 - 353
Target Start/End: Original strand, 3159052 - 3159136
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtga-tttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||  |||||| ||||||||| ||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  3159052 aaatcactattccgagttgtttttccttctatcataattaaataagtgattttcacatattttcagctttctttcgtttgttttt 3159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 28837128 - 28837177
Alignment:
Q  323 acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28837128 acatattttctgttttttttcgtttgtttttgtgatttcgtcgtctctgc 28837177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 32616895 - 32616836
Alignment:
Q  311 ataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  32616895 ataagagatttcacatattttctgttttatttcgtttatttttgtgatttcgtcatctct 32616836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 7084167 - 7084276
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||||||||| |  ||| |||||||| |  ||||||||||| || |||| |  ||||||| ||||||||| ||||| | |||||||||||||||||    
T  7084167 ttcttcttcttgttgtcagaggggtgatttaggttcaattttgacccaaaaattatgcttccgatttgtttttccttctaccttaattgaataagtgatt 7084266  T
Q  321 tcacatattt 330  Q
     |||||||||    
T  7084267 gcacatattt 7084276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 27090755 - 27090836
Alignment:
Q  291 tttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||| ||||||| |||| ||||||||||||| ||| |||||||  |||||||||||||| |||||| ||||||| ||||||||    
T  27090755 tttccttctatcctaatcgaataagtgatttccacgtattttcatttttctttcgtttg-ttttgtaatttcgttgtctctgc 27090836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 1551568 - 1551608
Alignment:
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgattt 360  Q
    ||||||||||||| || ||||||| ||||||||||||||||    
T  1551568 ttcacatattttcggtattctttcatttgtttttgtgattt 1551608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 22621513 - 22621541
Alignment:
Q  340 tttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||||||||||||||||||||    
T  22621513 tttcgtttgtttttgtgatttcgtcgtct 22621541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 6098 - 6248
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| |||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||    
T  6098 ttcttcttcttcttgtcagaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatt 6197  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6198 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 6248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 424451 - 424301
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| |||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||    
T  424451 ttcttcttcttcttgtcagaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatt 424352  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  424351 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 221 - 366
Target Start/End: Complemental strand, 28678290 - 28678145
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||| ||| |||||||| | |||||||||||| || ||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  28678290 ttcttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattgtttttcgttctatcataattgaataagtgatt 28678191  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||    
T  28678190 tcacatattttatattttctttcgtttgtttttgtgatttcgtcgt 28678145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 221 - 370
Target Start/End: Complemental strand, 4882519 - 4882370
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||  || ||||| |||||||||| ||| || ||||||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  4882519 ttcttcttcttcttttcagatgggcgatttagagtcaatttcgacccaaaaatcacccctccgatttgtttttcattatatcctaattgaataagtgatt 4882420  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882419 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 4882370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 188 - 371
Target Start/End: Original strand, 29205210 - 29205396
Alignment:
Q  188 ttctcttcttttcaaaccctagttgtcaccattttcttc---ttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccga 284  Q
    |||||| ||| |||||||||||  ||| || ||||||||   ||||| ||||| ||  |||||||| | |||||||||||| || ||||||||| |  ||    
T  29205210 ttctctccttctcaaaccctagccgtcgcccttttcttcgtcttcttctttttagacgggtgatttagggtcaattttgacccaaaaatcaccccttgga 29205309  T
Q  285 attgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29205310 attgtttttccttctatcataattgaataagtgatttcatatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctg 29205396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 32784091 - 32784219
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  32784091 ggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgatttcacatattttctgttttcttt 32784190  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
     ||||||||||||||||||||||||||||    
T  32784191 tgtttgtttttgtgatttcgtcgtctctg 32784219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 42490854 - 42491004
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  |||||||||||| | ||||| ||||||  | ||||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  42490854 ttcttcttcttcttgtcagagaggtgatttagggtcaagtttgacctaaaaatcacccctccgaattgtttttcgttctatcttaattgaataagtgatt 42490953  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  42490954 tcacatatcttcagttttctttcgtttgtttttgtgatttcgtcgtctctg 42491004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 33487190 - 33487043
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| |||||||| | |||||||||||| || ||||||||| ||||||||||||||| ||||||| |||||||||| ||||||    
T  33487190 ttcttcttcttcttttcagaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgatt 33487091  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    ||| ||||||| || |||||||||||||||||||||||||||||||||    
T  33487090 tcatatattttatgctttctttcgtttgtttttgtgatttcgtcgtct 33487043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 3232749 - 3232899
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||  |||||||| | |||||||||||   | ||||||||| ||||||||||||||| ||||||| ||||||||||| |||||    
T  3232749 ttcttcttcttcttttcagatgggtgatttagggtcaattttgatcaaaaaatcacccctccgaattgtttttccttctatcctaattgaataaatgatt 3232848  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3232849 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtttctg 3232899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 27534660 - 27534810
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| || |  ||| | |||||| | |||||||||||| || |||||| || ||||| ||||||||| ||||| | |||||||||||||||||    
T  27534660 ttcttcttcttcttgtcagagggatgatttagggtcaattttgacccaaaaatcatccctccgatttgtttttccttctaccttaattgaataagtgatt 27534759  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27534760 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 27534810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 243 - 368
Target Start/End: Original strand, 12871604 - 12871729
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | |||||||||||| || ||||||||| ||||| |||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||    
T  12871604 ggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttcacatattttcagttttcttt 12871703  T
Q  343 cgtttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||||||||||    
T  12871704 cgtttgtttttgtgatttcgtcgtct 12871729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 44517157 - 44517258
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44517157 aaatcacccttccgaattgtttttccttctatcctaattcaataagtgatttcacatattttctgctttctttcgtttgtttttgtgatttcgtcgtctc 44517256  T
Q  370 tg 371  Q
    ||    
T  44517257 tg 44517258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 37822471 - 37822355
Alignment:
Q  255 tcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttg 354  Q
    ||||||||||| || |||| ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  37822471 tcaattttgacccaaaaattacccttctgaattgtttttccttctatcctaattgaataagtgatttcacatattttctattttctttcatttgtttttg 37822372  T
Q  355 tgatttcgtcgtctctg 371  Q
    |||||||||||||||||    
T  37822371 tgatttcgtcgtctctg 37822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 7995721 - 7995570
Alignment:
Q  221 ttcttcttcttgtttttt-gagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgat 319  Q
    ||||||||||| |||||  ||| |||||||| | |||||||||||| || ||||||||  ||||||||||||||| ||||||| ||||||||||||||||    
T  7995721 ttcttcttcttctttttcagaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgat 7995622  T
Q  320 ttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||||||||||||| | ||| |||||||||| ||||||||||||    
T  7995621 ttcacatattttctgttttcttccttttttttttgtgatatcgtcgtctctg 7995570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 20411532 - 20411683
Alignment:
Q  219 ttttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtga 318  Q
    ||||||||||||| ||||| ||  ||||||||   |||||||||||| || ||||||||| ||||||||||||||| || |||   ||||||||||||||    
T  20411532 ttttcttcttcttctttttagatgggtgatttatggtcaattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtga 20411631  T
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  20411632 tttcacatattttctgttttctttcgtttgtttttgggatttcatcgtctct 20411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 14265267 - 14265395
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | ||||||||||||| | ||||||||| |||||  |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||     
T  14265267 ggtgatttagggtcaattttgacaaaaaaatcacccctccgagctgtttttccttctatcctaattaaataagtgatttcacatattttctgttttctta 14265366  T
Q  343 cgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||| |||||||||||||||||||||||||    
T  14265367 cgtatgtttttgtgatttcgtcgtctctg 14265395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 371
Target Start/End: Original strand, 42276299 - 42276466
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattc 298  Q
    |||||||||||| |||||| |||||||||||||   ||  ||| |||||||| | || | |||||||||| ||||||||| ||||||||||||||  |||    
T  42276299 tcaaaccctagtcgtcacccttttcttcttctt---ttcagaggggtgatttagggttatttttgacaca-aaatcacccctccgaattgttttttcttc 42276394  T
Q  299 tatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||    
T  42276395 tatcataattaaataactgatttcacatattttcagttttctttcgtttg-atttgtgattacgtcgtctctg 42276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 10627010 - 10627111
Alignment:
Q  270 aaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    |||||| || ||||| ||||||||| || |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10627010 aaatcatccctccgagttgtttttctttatatcctaattgaataagtaatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 10627109  T
Q  370 tg 371  Q
    ||    
T  10627110 tg 10627111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 13488699 - 13488546
Alignment:
Q  220 tttcttcttcttgttttt-tgagagg-tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtg 317  Q
    ||||||||||||||| || | ||||| |||||| | ||| |||||||| || ||||||||| ||||| ||||||||| ||| | | ||||||||||||||    
T  13488699 tttcttcttcttgttgttgtcagagggtgatttagggtcgattttgacccaaaaatcacccatccgatttgtttttccttccaccttaattgaataagtg 13488600  T
Q  318 atttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13488599 attttacatattttctattttctttcgtttgtttttgtgatttcgccgtctctg 13488546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 245 - 372
Target Start/End: Original strand, 17347584 - 17347709
Alignment:
Q  245 tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcg 344  Q
    |||||| | |||||||||||| || ||||||||| ||||| ||||||||  |||||||||||  |||||||||||||||||| ||||||||||||||||     
T  17347584 tgatttagggtcaattttgac-caaaaatcacccatccgagttgttttttcttctatcataaaggaataagtgatttcacatcttttctgttttctttc- 17347681  T
Q  345 tttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||||||||||||||||||||||||||    
T  17347682 tttgtttttgtgatttcgtcgtctctgc 17347709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 221 - 363
Target Start/End: Original strand, 18343575 - 18343717
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    |||||||| ||||| |  ||| |||||||| |  ||||||||||| || ||||||||| | ||| ||||||||| ||||| | ||||| ||| |||||||    
T  18343575 ttcttcttgttgttgtcagaggggtgatttaggatcaattttgacccaaaaatcaccccttcgatttgtttttccttctaccttaattaaatgagtgatt 18343674  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgt 363  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18343675 tcacatattttctgttttctttcgtttgtttttgtgatttcgt 18343717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 369
Target Start/End: Complemental strand, 29726690 - 29726608
Alignment:
Q  287 tgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    |||||||| || |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctc 29726608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 51418040 - 51418124
Alignment:
Q  286 ttgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51418040 ttgtttttccttctatcctaattgaa-aagtgatttcacatattttctgttttctttcgtttgtttttgtaatttcgtcgtctctg 51418124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 221 - 361
Target Start/End: Complemental strand, 4871186 - 4871046
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||||||  ||||||||    ||||||||||| || ||||||||  ||||||||||||||| || |||  ||||||||||||| |||    
T  4871186 ttcttcttcttcttttttgacgggtgatttaagatcaattttgactcataaatcaccactccgaattgtttttccttttattctaattgaataagttatt 4871087  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttc 361  Q
    ||||||||||||| |||| || |||||||||||||||||||    
T  4871086 tcacatattttctatttttttccgtttgtttttgtgatttc 4871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 15391329 - 15391262
Alignment:
Q  304 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15391329 taattgaataagtgatttcacatgttttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 15391262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 368
Target Start/End: Original strand, 45750439 - 45750586
Alignment:
Q  221 ttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatt 320  Q
    ||||||||||| ||||  ||| ||||||||   |||||||||||| || |||||| |  ||||| |  |||||| || |||| ||||||||||||| |||    
T  45750439 ttcttcttcttcttttcagaggggtgatttaaggtcaattttgacccaaaaatcatcaatccgattgttttttccttttatcctaattgaataagttatt 45750538  T
Q  321 tcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||    
T  45750539 tcacatatttttggttttctttcgtttgtttttgtgatttcgtcgtct 45750586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 368
Target Start/End: Complemental strand, 45193718 - 45193639
Alignment:
Q  289 tttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  45193718 tttttccttctatcctaattgaataagtgatttcacatattttccgtttcctttcgtttgtttttgtgattttgtcgtct 45193639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 15791344 - 15791285
Alignment:
Q  312 taagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15791344 taagtgatttaacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctg 15791285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 28399414 - 28399336
Alignment:
Q  289 tttttcattctatcataattgaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgt 366  Q
    |||||| || |||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  28399414 tttttccttatatcataattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtgatttcgtcgt 28399336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 372
Target Start/End: Complemental strand, 33125946 - 33125814
Alignment:
Q  240 agaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgtttt 338  Q
    ||||||||||| | |||||||||||| || ||||||| | ||  ||||||||||| |||| | ||||||||||||||||||| |||||| |||  || ||    
T  33125946 agaggtgatttagggtcaattttgaccca-aaatcactcatctaaattgtttttccttcttttataattgaataagtgatttccacataattttagtatt 33125848  T
Q  339 ctttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    ||||  ||||||||||||||||||| ||||||||    
T  33125847 cttttctttgtttttgtgatttcgttgtctctgc 33125814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 371
Target Start/End: Complemental strand, 33939180 - 33939023
Alignment:
Q  203 accctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatc 302  Q
    |||||| ||||||||  ||| || | ||| ||||| ||| |||||||| | |||||||||||| || ||||||||| || |||||||||||| ||||||     
T  33939180 accctaattgtcaccccttttttttccttctttttagaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttctttctat- 33939082  T
Q  303 ataattgaataagtgatttcacata--ttttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
                |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  33939081 ------------gtgatttcacataaattttctgttttctttcgtttgtttttgtgatttcgtcatctctg 33939023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 361
Target Start/End: Complemental strand, 9298551 - 9298434
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctt 341  Q
    |||||||| | |||||||||||  || || ||||||| |||| ||||||||| ||||||| || || ||||| ||||||| || ||||||  ||||||||    
T  9298551 ggtgatttagggtcaattttgaacca-aagtcaccct-ccgagttgtttttccttctatcctagttaaataattgatttccacgtattttaagttttctt 9298454  T
Q  342 tcgtttgtttttgtgatttc 361  Q
    ||||||||||||||||||||    
T  9298453 tcgtttgtttttgtgatttc 9298434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 353
Target Start/End: Original strand, 32878691 - 32878798
Alignment:
Q  243 ggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcttt 342  Q
    |||||||| | || ||||||||| || |||||| |||||||| |||||||||  |||||| ||||| |||||||| |||||||||||| |  ||||||||    
T  32878691 ggtgatttagggttaattttgaccca-aaatcatccttccgagttgtttttccctctatcctaattaaataagtg-tttcacatattt-caattttcttt 32878787  T
Q  343 cgtttgttttt 353  Q
    |||||||||||    
T  32878788 cgtttgttttt 32878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 38783090 - 38783175
Alignment:
Q  283 gaattgtttttcattctatcataattgaataagtgatttca-catattttctgttttctttcgtttgtttttgtgatttcgtcgtc 367  Q
    |||||||||||| |||| |  || || |||||||||||| | ||||||||| |||||| |||||| ||||||||||||||||||||    
T  38783090 gaattgtttttctttctcttttagttaaataagtgattttaacatattttcagttttccttcgttcgtttttgtgatttcgtcgtc 38783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 369
Target Start/End: Complemental strand, 50107967 - 50107926
Alignment:
Q  328 ttttctgttttctttcgtttgtttttgtgatttcgtcgtctc 369  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  50107967 ttttcagttttctttcgtttgtttttgtgatttcgtcgtctc 50107926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 30678315 - 30678359
Alignment:
Q  319 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtc 364  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||    
T  30678315 tttcacatattttcagttttctttcgtttg-ttttgtgatttcgtc 30678359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 15791614 - 15791554
Alignment:
Q  255 tcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataag 315  Q
    |||||||||||||| ||||||| | ||||| ||||||||| || |||| ||||||||||||    
T  15791614 tcaattttgacacaaaaatcactcatccgagttgtttttccttatatcttaattgaataag 15791554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 372
Target Start/End: Original strand, 47551177 - 47551209
Alignment:
Q  340 tttcgtttgtttttgtgatttcgtcgtctctgc 372  Q
    |||||||||||||||||||||||||||||||||    
T  47551177 tttcgtttgtttttgtgatttcgtcgtctctgc 47551209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 32301388 - 32301447
Alignment:
Q  310 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||||| ||||||| ||  || ||||||||||||||||||||||||| ||||||    
T  32301388 aataagtgattttcacatatctttagtattctttcgtttgtttttgtgatttcatcgtct 32301447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 45425544 - 45425485
Alignment:
Q  310 aataagtgatttc-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||||| || || |||||||  |||||||||||| |||||||||||||||||||||    
T  45425544 aataagtgatatccacgtattttcaattttctttcgttagtttttgtgatttcgtcgtct 45425485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 2830 - 3010
Alignment:
Q  187 tttctcttcttttcaaaccctagttgtcaccattttcttcttcttgttttttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaat 286  Q
    ||||||||||| |||||||||||| ||||||  |||||||||||||||    ||| |||||||| | |||||||||||| ||  |||||||| ||||| |    
T  2830 tttctcttcttctcaaaccctagtcgtcacccctttcttcttcttgtta---gaggggtgatttagggtcaattttgacccaataatcacccctccgagt 2926  T
Q  287 tgttttt--cattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 368  Q
    |||||||  | ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  2927 tgtttttttccttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgattttgtcgtct 3010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 74148 - 74264
Alignment:
Q  244 gtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttc 343  Q
    ||||||| || ||||||||||| || ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  74148 gtgatttagaatcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgttttctttc 74247  T
Q  344 gtttgtttttgtgattt 360  Q
    |||||||||||||||||    
T  74248 gtttgtttttgtgattt 74264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 254 - 372
Target Start/End: Complemental strand, 1213 - 1095
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||| || ||||||||| | ||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1213 gtcaattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttcacatattttcagttttctttcgtttgttttt 1114  T
Q  354 gtgatttcgtcgtctctgc 372  Q
    |||||||||||||||||||    
T  1113 gtgatttcgtcgtctctgc 1095  T

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Target: scaffold1379; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 1 - 86
Alignment:
Q  286 ttgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttcgtcgtctctg 86  T

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Target: scaffold0321 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 7245 - 7137
Alignment:
Q  260 tttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatt 359  Q
    |||||| || ||||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7245 tttgacccaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatt 7146  T
Q  360 tcgtcgtct 368  Q
    |||||||||    
T  7145 tcgtcgtct 7137  T

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Target: scaffold0001 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 254 - 370
Target Start/End: Complemental strand, 404385 - 404269
Alignment:
Q  254 gtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgttttt 353  Q
    |||||||||||  || ||||||||| ||||||| ||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  404385 gtcaattttgatccaaaaatcacccatccgaatagtttttcttgctatcctaattgaataagtgatttcacatattttctgttttcttccgtttgttttt 404286  T
Q  354 gtgatttcgtcgtctct 370  Q
    |||||||||||||||||    
T  404285 gtgatttcgtcgtctct 404269  T

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Target: scaffold0155 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 240 - 370
Target Start/End: Original strand, 35062 - 35194
Alignment:
Q  240 agaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcac--atattttctgttt 337  Q
    ||||||||||| | |||||||||||| || ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||  |||||||||||||    
T  35062 agaggtgatttagggtcaattttgacccaaaaatcacccatccgagttgtttttccttctatcctaattgaataagtgatttcacatatattttctgttt 35161  T
Q  338 tctttcgtttgtttttgtgatttcgtcgtctct 370  Q
    ||||||||||||||||| |||||| || |||||    
T  35162 tctttcgtttgtttttgcgatttcatcatctct 35194  T

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Target: scaffold0432 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 361
Target Start/End: Complemental strand, 2600 - 2438
Alignment:
Q  199 tcaaaccctagttgtcaccattttcttcttcttgtttt--ttgagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcat 296  Q
    |||||||||||| |||||| ||||||||||||| || |  |  || |||||||| | |||| ||||||| || |||||||||| | || ||||||||| |    
T  2600 tcaaaccctagtcgtcacccttttcttcttctttttatcctctaggggtgatttagggtcatttttgacccaaaaatcaccct-ctgagttgtttttcct 2502  T
Q  297 tctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttc 361  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2501 tctatcataatcgaataagtgatttcacatattttctgttttctttcgtttg-ttttgtgatttc 2438  T

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Target: scaffold0121 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 371
Target Start/End: Complemental strand, 13411 - 13255
Alignment:
Q  221 ttcttcttcttgtttttt--gagaggtgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattct----atcataattgaataa 314  Q
    ||||||||||| | ||||  |||||||||||| | |||||||||||  || ||||||||| ||||||||||||||  || |    ||| |||||||||||    
T  13411 ttcttcttcttttcttttcagagaggtgatttagggtcaattttgatccaaaaatcacccctccgaattgtttttttttttttttatcctaattgaataa 13312  T
Q  315 gtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  13311 gtgatttcacatcttttctgttttcttttgtttgtttttgtgatttcgtcgtctctg 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 291 - 371
Target Start/End: Original strand, 1605 - 1685
Alignment:
Q  291 tttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctg 371  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1605 tttccttctaccataattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctctg 1685  T

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Target: scaffold0294 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 245 - 368
Target Start/End: Complemental strand, 4202 - 4080
Alignment:
Q  245 tgatttggagtcaattttgacacacaaatcacccttccgaattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcg 344  Q
    |||||| | ||||||||||||||| ||||||| | |  || |||| || | ||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  4202 tgatttagggtcaattttgacacaaaaatcactcctttgagttgtcttcc-ttctatcctaattaaataagtgatttcacatattttatgttttctttcg 4104  T
Q  345 tttgtttttgtgatttcgtcgtct 368  Q
    ||||||||||||||||||||||||    
T  4103 tttgtttttgtgatttcgtcgtct 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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