View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17777_low_47 (Length: 231)
Name: NF17777_low_47
Description: NF17777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17777_low_47 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 6291363 - 6291550
Alignment:
| Q |
11 |
tccaagaatattaattcaaacaagaaaagaaaggaattctaatcctttcaacaatacctctatatctatatctatatattcccttccattttggtatcct |
110 |
Q |
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| T |
6291363 |
tccaaaaatattaattcaaacaagaaaagaaaggaattctaatcctttcaacaatacctctatatctatatctatatattcccttccattttggtatcct |
6291462 |
T |
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| Q |
111 |
agaatcttttgtcttccttcctcacaatgacaatattcatcacaacaatgtttatttttctagcattttctctgcatgcaggtatgct |
198 |
Q |
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| T |
6291463 |
agaatcttttctcttccttcctcacaatgacaatattcatcacaacaatgtttatttttctagcattttctctccatgcaggtatgct |
6291550 |
T |
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