View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17777_low_48 (Length: 230)

Name: NF17777_low_48
Description: NF17777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17777_low_48
NF17777_low_48
[»] chr3 (46 HSPs)
chr3 (20-215)||(28503814-28504009)
chr3 (47-215)||(22173134-22173301)
chr3 (43-215)||(7167219-7167391)
chr3 (43-211)||(8739017-8739185)
chr3 (43-211)||(9091255-9091423)
chr3 (43-211)||(2671540-2671708)
chr3 (69-215)||(18656436-18656579)
chr3 (43-166)||(40372794-40372917)
chr3 (55-196)||(8512203-8512344)
chr3 (55-196)||(8517083-8517224)
chr3 (43-167)||(8477336-8477461)
chr3 (113-215)||(28501647-28501750)
chr3 (69-196)||(2672889-2673015)
chr3 (69-196)||(2677045-2677171)
chr3 (55-196)||(32475471-32475610)
chr3 (69-196)||(32480344-32480468)
chr3 (69-166)||(26928590-26928687)
chr3 (43-166)||(1305923-1306046)
chr3 (59-189)||(24968097-24968227)
chr3 (43-166)||(32143295-32143419)
chr3 (69-166)||(8370475-8370573)
chr3 (69-166)||(27974941-27975039)
chr3 (69-166)||(18552871-18552970)
chr3 (69-166)||(16264350-16264448)
chr3 (69-166)||(21711223-21711321)
chr3 (69-166)||(27452958-27453056)
chr3 (70-166)||(36029094-36029192)
chr3 (72-166)||(1736293-1736389)
chr3 (69-152)||(27986449-27986533)
chr3 (69-166)||(30709778-30709877)
chr3 (69-152)||(33386669-33386753)
chr3 (69-166)||(3715990-3716089)
chr3 (69-166)||(40592770-40592869)
chr3 (69-166)||(48438214-48438313)
chr3 (69-166)||(6794702-6794800)
chr3 (69-166)||(25795781-25795880)
chr3 (69-166)||(26298988-26299087)
chr3 (69-111)||(10207935-10207977)
chr3 (69-152)||(1417493-1417577)
chr3 (69-166)||(40844652-40844750)
chr3 (69-166)||(47923894-47923993)
chr3 (69-166)||(37466291-37466389)
chr3 (69-152)||(39039995-39040079)
chr3 (69-166)||(3328345-3328443)
chr3 (108-136)||(4386947-4386975)
chr3 (69-166)||(24695152-24695251)
[»] chr8 (29 HSPs)
chr8 (43-215)||(6311272-6311443)
chr8 (47-215)||(7289865-7290032)
chr8 (55-215)||(25328218-25328376)
chr8 (43-215)||(36979352-36979524)
chr8 (43-211)||(33037761-33037928)
chr8 (43-215)||(18853117-18853290)
chr8 (43-215)||(18870511-18870684)
chr8 (44-211)||(10689097-10689264)
chr8 (58-215)||(30655636-30655793)
chr8 (43-211)||(4760029-4760197)
chr8 (55-201)||(39784776-39784921)
chr8 (55-196)||(10684222-10684363)
chr8 (59-201)||(35745381-35745524)
chr8 (45-166)||(1261953-1262075)
chr8 (43-152)||(26287875-26287985)
chr8 (43-152)||(26301132-26301242)
chr8 (43-152)||(26313126-26313236)
chr8 (43-166)||(31071228-31071353)
chr8 (69-155)||(26403240-26403327)
chr8 (69-166)||(4456028-4456126)
chr8 (72-166)||(7412344-7412439)
chr8 (69-166)||(19175753-19175851)
chr8 (69-166)||(23799575-23799674)
chr8 (69-152)||(4696609-4696693)
chr8 (72-166)||(6127224-6127320)
chr8 (69-166)||(5702481-5702580)
chr8 (71-133)||(9765852-9765914)
chr8 (69-166)||(19752393-19752491)
chr8 (73-139)||(33079685-33079753)
[»] chr5 (35 HSPs)
chr5 (44-215)||(31180190-31180360)
chr5 (47-215)||(43592258-43592425)
chr5 (44-215)||(1457101-1457271)
chr5 (47-215)||(27449793-27449960)
chr5 (47-215)||(15044665-15044831)
chr5 (47-215)||(27444949-27445116)
chr5 (47-215)||(43598703-43598870)
chr5 (47-215)||(43604195-43604362)
chr5 (47-215)||(43609687-43609854)
chr5 (44-215)||(30631382-30631553)
chr5 (55-215)||(28807514-28807671)
chr5 (55-201)||(37556575-37556721)
chr5 (55-201)||(37561397-37561543)
chr5 (59-196)||(31396951-31397088)
chr5 (59-196)||(31401808-31401945)
chr5 (43-166)||(38192147-38192271)
chr5 (43-166)||(38219372-38219496)
chr5 (59-201)||(33768169-33768312)
chr5 (43-166)||(35387636-35387760)
chr5 (59-165)||(2785365-2785472)
chr5 (59-201)||(33791306-33791449)
chr5 (47-166)||(24135826-24135946)
chr5 (69-166)||(9353331-9353429)
chr5 (69-166)||(36932349-36932447)
chr5 (69-166)||(10281751-10281850)
chr5 (69-166)||(15464532-15464630)
chr5 (70-166)||(11916970-11917068)
chr5 (69-166)||(14520230-14520328)
chr5 (69-166)||(3880299-3880398)
chr5 (72-166)||(12084174-12084269)
chr5 (69-155)||(17003970-17004057)
chr5 (69-166)||(19588746-19588845)
chr5 (69-166)||(28832259-28832357)
chr5 (69-166)||(42127409-42127507)
chr5 (73-133)||(4410241-4410301)
[»] chr6 (27 HSPs)
chr6 (47-215)||(22010636-22010803)
chr6 (58-215)||(11856964-11857120)
chr6 (55-215)||(14737516-14737674)
chr6 (55-215)||(28184492-28184650)
chr6 (55-215)||(14742376-14742534)
chr6 (55-215)||(28155510-28155668)
chr6 (55-201)||(6438487-6438632)
chr6 (70-215)||(5674719-5674865)
chr6 (69-196)||(33330403-33330529)
chr6 (59-215)||(16838734-16838890)
chr6 (59-201)||(6005407-6005550)
chr6 (69-196)||(33335900-33336026)
chr6 (69-166)||(5757477-5757575)
chr6 (69-166)||(21356036-21356134)
chr6 (69-166)||(5572239-5572338)
chr6 (69-166)||(10077163-10077262)
chr6 (69-166)||(31086471-31086570)
chr6 (69-166)||(22963700-22963798)
chr6 (69-166)||(23824595-23824693)
chr6 (69-166)||(4629954-4630053)
chr6 (69-166)||(31979513-31979612)
chr6 (59-111)||(5343471-5343524)
chr6 (81-166)||(21801342-21801429)
chr6 (43-152)||(22708992-22709102)
chr6 (90-166)||(18232867-18232944)
chr6 (69-152)||(5017482-5017566)
chr6 (69-133)||(31936587-31936651)
[»] chr2 (34 HSPs)
chr2 (47-215)||(44312563-44312730)
chr2 (55-215)||(39811928-39812086)
chr2 (44-215)||(11098877-11099048)
chr2 (47-215)||(32246766-32246933)
chr2 (43-211)||(14291463-14291631)
chr2 (43-211)||(9296355-9296523)
chr2 (43-166)||(3491725-3491848)
chr2 (43-166)||(25398469-25398593)
chr2 (55-201)||(19344407-19344554)
chr2 (55-201)||(19349265-19349412)
chr2 (43-166)||(25403607-25403731)
chr2 (45-152)||(40738820-40738926)
chr2 (69-166)||(21629944-21630042)
chr2 (69-155)||(8040060-8040147)
chr2 (72-166)||(13569331-13569427)
chr2 (69-166)||(28259176-28259274)
chr2 (69-166)||(10445442-10445541)
chr2 (69-166)||(17865203-17865302)
chr2 (69-166)||(20522220-20522319)
chr2 (69-166)||(34682332-34682431)
chr2 (70-166)||(34388859-34388957)
chr2 (69-166)||(14699006-14699104)
chr2 (99-166)||(25407653-25407720)
chr2 (70-166)||(10707250-10707348)
chr2 (72-166)||(8390148-8390244)
chr2 (69-155)||(31056044-31056131)
chr2 (69-166)||(33528619-33528718)
chr2 (69-166)||(39482931-39483030)
chr2 (69-166)||(23078469-23078567)
chr2 (69-166)||(36757761-36757859)
chr2 (69-166)||(42039668-42039766)
chr2 (69-155)||(16940219-16940306)
chr2 (69-155)||(17010884-17010971)
chr2 (69-166)||(33118136-33118235)
[»] chr1 (29 HSPs)
chr1 (20-215)||(41398184-41398381)
chr1 (20-215)||(41390529-41390726)
chr1 (47-215)||(24787314-24787482)
chr1 (55-201)||(25445042-25445188)
chr1 (55-201)||(39445486-39445631)
chr1 (55-201)||(1054965-1055110)
chr1 (55-201)||(44023827-44023972)
chr1 (43-166)||(24202768-24202892)
chr1 (55-196)||(43988422-43988563)
chr1 (69-166)||(19358842-19358939)
chr1 (69-166)||(19361431-19361528)
chr1 (69-166)||(19380071-19380168)
chr1 (69-166)||(26644896-26644994)
chr1 (69-166)||(19072928-19073027)
chr1 (69-166)||(19120818-19120917)
chr1 (69-155)||(47703946-47704033)
chr1 (69-166)||(16124514-16124613)
chr1 (69-166)||(27104370-27104469)
chr1 (69-166)||(3281708-3281806)
chr1 (69-155)||(9476261-9476348)
chr1 (69-155)||(13598398-13598485)
chr1 (69-155)||(29651811-29651898)
chr1 (69-162)||(37069770-37069864)
chr1 (69-155)||(775672-775759)
chr1 (69-166)||(13604622-13604720)
chr1 (69-166)||(21536568-21536666)
chr1 (69-166)||(47098823-47098921)
chr1 (69-166)||(32889439-32889537)
chr1 (72-166)||(47102840-47102935)
[»] chr4 (30 HSPs)
chr4 (47-215)||(51520436-51520603)
chr4 (55-215)||(45357236-45357394)
chr4 (47-215)||(9224346-9224513)
chr4 (47-215)||(9229133-9229300)
chr4 (55-215)||(45347756-45347915)
chr4 (43-215)||(24741915-24742087)
chr4 (47-201)||(56146664-56146817)
chr4 (43-215)||(3813998-3814168)
chr4 (69-215)||(5732666-5732809)
chr4 (43-167)||(29760616-29760740)
chr4 (55-201)||(18855713-18855858)
chr4 (43-152)||(28468542-28468651)
chr4 (43-166)||(31985633-31985756)
chr4 (69-166)||(10047379-10047478)
chr4 (69-166)||(39245994-39246093)
chr4 (69-166)||(36315228-36315326)
chr4 (69-166)||(36329437-36329535)
chr4 (69-166)||(16623291-16623390)
chr4 (69-166)||(5396670-5396768)
chr4 (69-166)||(3796517-3796616)
chr4 (69-155)||(38152449-38152536)
chr4 (70-154)||(5143260-5143345)
chr4 (69-152)||(5269204-5269288)
chr4 (70-166)||(5147678-5147776)
chr4 (70-166)||(3777550-3777647)
chr4 (73-166)||(16630678-16630773)
chr4 (69-155)||(24333809-24333896)
chr4 (74-155)||(6743425-6743507)
chr4 (69-166)||(42599571-42599671)
chr4 (69-154)||(54867184-54867269)
[»] scaffold0355 (1 HSPs)
scaffold0355 (43-215)||(9583-9752)
[»] scaffold0135 (1 HSPs)
scaffold0135 (47-215)||(35001-35168)
[»] chr7 (35 HSPs)
chr7 (55-215)||(12406318-12406477)
chr7 (50-215)||(12396893-12397057)
chr7 (47-215)||(31109523-31109690)
chr7 (47-192)||(20357521-20357665)
chr7 (47-159)||(4866709-4866820)
chr7 (69-215)||(24024266-24024410)
chr7 (47-211)||(2057944-2058108)
chr7 (55-201)||(19992299-19992445)
chr7 (55-196)||(24261281-24261422)
chr7 (55-196)||(24266160-24266301)
chr7 (43-215)||(1533393-1533567)
chr7 (55-196)||(16880059-16880199)
chr7 (55-196)||(16884915-16885055)
chr7 (43-166)||(21639782-21639906)
chr7 (69-166)||(18408764-18408861)
chr7 (69-166)||(18413641-18413737)
chr7 (43-166)||(21645980-21646104)
chr7 (55-164)||(21812229-21812337)
chr7 (69-166)||(29159803-29159902)
chr7 (70-154)||(21983285-21983370)
chr7 (69-166)||(46516308-46516407)
chr7 (69-166)||(49091661-49091760)
chr7 (69-166)||(44848683-44848781)
chr7 (69-166)||(55948-56046)
chr7 (69-166)||(2647694-2647793)
chr7 (69-166)||(33332448-33332547)
chr7 (69-166)||(9190007-9190105)
chr7 (69-166)||(20284089-20284187)
chr7 (69-166)||(2580390-2580488)
chr7 (69-166)||(2479337-2479434)
chr7 (69-149)||(47263678-47263757)
chr7 (69-153)||(35960816-35960901)
chr7 (69-152)||(9185178-9185262)
chr7 (70-154)||(21988909-21988992)
chr7 (72-133)||(28617258-28617319)
[»] scaffold0464 (1 HSPs)
scaffold0464 (55-201)||(349-494)
[»] scaffold0197 (2 HSPs)
scaffold0197 (55-196)||(14267-14408)
scaffold0197 (59-196)||(19123-19260)
[»] scaffold0259 (1 HSPs)
scaffold0259 (59-196)||(2209-2346)
[»] scaffold0188 (2 HSPs)
scaffold0188 (43-166)||(17951-18075)
scaffold0188 (44-166)||(24044-24167)
[»] scaffold0028 (1 HSPs)
scaffold0028 (59-196)||(148914-149051)
[»] scaffold0009 (1 HSPs)
scaffold0009 (55-138)||(181980-182063)
[»] scaffold0140 (1 HSPs)
scaffold0140 (69-166)||(8418-8516)
[»] scaffold0036 (1 HSPs)
scaffold0036 (70-166)||(85684-85781)
[»] scaffold0087 (2 HSPs)
scaffold0087 (69-166)||(43960-44058)
scaffold0087 (69-166)||(36831-36929)
[»] scaffold0148 (1 HSPs)
scaffold0148 (69-166)||(10729-10828)
[»] scaffold0006 (3 HSPs)
scaffold0006 (69-155)||(5683-5770)
scaffold0006 (69-155)||(2492-2579)
scaffold0006 (69-166)||(133279-133377)
[»] scaffold0978 (1 HSPs)
scaffold0978 (45-101)||(300-356)
[»] scaffold0098 (1 HSPs)
scaffold0098 (69-152)||(45253-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (72-166)||(17266-17362)


Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 28504009 - 28503814
Alignment:
Q  20 acaaagagataacaaagcatagacaagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagc 119  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  28504009 acaaagagataacaaagcataaacaagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatct-ggggaagagagc 28503911  T
Q  120 agctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||||||| |||||||||||||    
T  28503910 agctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccctttg 28503814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 22173301 - 22173134
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22173301 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 22173203  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  22173202 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 22173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 7167219 - 7167391
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  7167219 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatga 7167317  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||||||||| |||||||||||||    
T  7167318 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctaccctttg 7167391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 8739185 - 8739017
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  8739185 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatga 8739087  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||| ||||| |||||||||    
T  8739086 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaatccctagattctaccc 8739017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 9091423 - 9091255
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  9091423 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatga 9091325  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||| ||||| |||||||||    
T  9091324 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaatccctagattctaccc 9091255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 2671708 - 2671540
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  2671708 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatga 2671610  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaaga-caaaccctaaattctaccc 211  Q
    |||||||||||| |||||||||||||  ||| |  ||||| |||||||||| ||| ||||| |||||||||    
T  2671609 aagtgttacaaagggttacaagaaacaatagattgcaagc-ttacacaagaccaagccctagattctaccc 2671540  T

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Target: chr3; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 18656436 - 18656579
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaact 168  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  18656436 aagattgttgacccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--act 18656532  T
Q  169 ctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||  |||||||||||||| | |||||||||| | |||||||||||    
T  18656533 ctagcattcaagctttacacatgaacaaaccctaga-tctaccctttg 18656579  T

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Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 40372917 - 40372794
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  40372917 caagataggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatga 40372819  T
Q  142 aagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||| ||||||||||||    
T  40372818 aagtgttacaaagggttacaagaaa 40372794  T

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Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 8512203 - 8512344
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  8512203 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggg-gagagagcagctctccaatccaatatgtgaatgtgttacaaa 8512301  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  8512302 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 8512344  T

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Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 8517083 - 8517224
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  8517083 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggg-gagagagcagctctccaatccaatatgtgaatgtgttacaaa 8517181  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  8517182 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 8517224  T

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Target: chr3; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 8477336 - 8477461
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    |||||||| || |||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  8477336 caagaaagaaagaacaaacacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatg 8477434  T
Q  141 aaagtgttacaaaaggttacaagaaac 167  Q
    ||||||||||||| |||||||||||||    
T  8477435 aaagtgttacaaagggttacaagaaac 8477461  T

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Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 28501750 - 28501647
Alignment:
Q  113 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||||||| |||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccc 28501651  T
Q  212 tttg 215  Q
    ||||    
T  28501650 tttg 28501647  T

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Target: chr3; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 2673015 - 2672889
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagaaac 167  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||      
T  2673015 aagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa-- 2672919  T
Q  168 tctagc-tatcaagctttacacaagacaaa 196  Q
    |||||| |||||||||||||||| ||||||    
T  2672918 tctagcttatcaagctttacacatgacaaa 2672889  T

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Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 2677171 - 2677045
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagaaac 167  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||      
T  2677171 aagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa-- 2677075  T
Q  168 tctagc-tatcaagctttacacaagacaaa 196  Q
    |||||| |||||||||||||||| ||||||    
T  2677074 tctagcttatcaagctttacacatgacaaa 2677045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 32475471 - 32475610
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||    
T  32475471 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatct-gggggagagagcagctctccaatccaatatgtgaatgt-ttacaaa 32475568  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
      ||||||||||  |||||| |||||||||||||||||||||||    
T  32475569 gagttacaagaa--tctagcttatcaagctttacacaagacaaa 32475610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 32480344 - 32480468
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaact 168  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||||  |    
T  32480344 aagattgttgacccagttcagccaatgtggcctaatct-gggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaa--t 32480439  T
Q  169 ctagc-tatcaagctttacacaagacaaa 196  Q
    ||||| |||||||||||||||||||||||    
T  32480440 ctagcttatcaagctttacacaagacaaa 32480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 26928687 - 26928590
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||    
T  26928687 aagattgttgacccagttcagccaatatgacctaatctg-ggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaaa 26928590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 1305923 - 1306046
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| || || |    
T  1305923 caagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatct-aggggagatagcagctctccaatccactacgatg 1306020  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  1306021 aaagtgttacaaagggttacaagaaa 1306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 24968097 - 24968227
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||| | |||| |||||| ||||||||||||||||||| ||| |||||||||||| |    
T  24968097 aaacaccgagcaagattgttgacccagttcagccaatgtggcttaattttgggg-agagagtagctctccaatccaatatgtgaatgtgttacaaaagag 24968195  T
Q  157 ttacaagaaactctagcta-tcaagctttacaca 189  Q
    |||||||||  |||||||| ||||||||||||||    
T  24968196 ttacaagaa--tctagctattcaagctttacaca 24968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 32143295 - 32143419
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga- 139  Q
    ||||||||||| |||||| ||||| | ||||||||||||| ||||| | |||||||| |||||||||||| |||||||||||||||||||||| |||||     
T  32143295 caagaaaggaagaacaaacacaccaa-aagattgttgacctagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccactatgat 32143392  T
Q  140 gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||| ||||||||||||    
T  32143393 gaaagtgttacaaagggttacaagaaa 32143419  T

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Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 8370573 - 8370475
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  8370573 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 8370475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 27975039 - 27974941
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  27975039 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 27974941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 18552970 - 18552871
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  18552970 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 18552872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 16264350 - 16264448
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||| | |||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  16264350 aagattgttgacctagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 16264448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 21711223 - 21711321
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||  |||||||||||    
T  21711223 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagctctcaaatccactatgatgaaagtgttacaaagagttacaagaaa 21711321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 27452958 - 27453056
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||| ||||||| | |||||||| ||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  27452958 aagattgttgatccagttcggtccaatatgacctaatccgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 27453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 36029094 - 36029192
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||||| | |||||||| ||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctggggg-agaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 36029192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 1736389 - 1736293
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 1736293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 27986533 - 27986449
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  27986533 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 30709877 - 30709778
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| |||| ||||||||||| ||||||||||    
T  30709877 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaa 30709779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 33386753 - 33386669
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||| ||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  33386753 aagattgttgatccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 3716089 - 3715990
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||| || | ||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||    
T  3716089 aagattgttgacccagttcggtccaatatgacctaatctaggag-agagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaa 3715991  T

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Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 40592869 - 40592770
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||| | ||||||||| |||||||||||| | ||||| |||||||||||||||| ||||||||||    
T  40592869 aagattgttgacccagttcggtccaatatgacctaatct-gtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaa 40592771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 48438214 - 48438313
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||| |||||| ||||| | |||||||| |||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  48438214 aagattattgacctagttcggtccaatatgacctaatctgggg-gagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 48438312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 6794800 - 6794702
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||| |||  | |||||||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  6794800 aagattgttgacccggttaggtccaatatgacctaatatggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 6794702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 25795781 - 25795880
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||| ||||| | |||||||| |||||||||||| |||||||||||||||||||| | || || ||||||||||| |||| ||||||||||    
T  25795781 aagattgttgacctagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaagaa 25795879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 26298988 - 26299087
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| |  ||||||| | |||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| ||||||||||    
T  26298988 aagattgttgacccagttcggttcaatatgacataatctgggg-gagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaa 26299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 10207935 - 10207977
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggg 111  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  10207935 aagattgttgacccagttcagccaatgtggcctaatctggggg 10207977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 1417577 - 1417493
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatg-agaaagtgttacaa 152  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||||||||||| | |||||||||| || | ||||||||||||||    
T  1417577 aagattgttgacccagttcggtccaatatgacctaatct-gggggagagagcatccctccaatccactaagaagaaagtgttacaa 1417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 40844652 - 40844750
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||||||||  |||||| | |||||||| ||||||||  |||||||||||||| ||| |||||| ||||| |||||||||||||||| ||||||||||    
T  40844652 aagattgttgattcagttcggtccaatatgacctaatct--ggggagagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaa 40844749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 47923993 - 47923894
Alignment:
Q  69 aagattgttgacccagttc-agccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| ||||||||  |||||||||||||| || ||||| | ||||| ||||||| |||||||| ||||||||||    
T  47923993 aagattgttgacccagttcgatccaatatgacctaatct-aggggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaagaa 47923895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 37466291 - 37466389
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||| |||||| | |||||||| |||||||| ||||||||||| ||| |||||||||| || || |||||||||||||   |||||||||||    
T  37466291 aagattgttgacacagttcggtccaatatgacctaatct-gggggagagagtagccctccaatccactaagatgaaagtgttacaatgagttacaagaaa 37466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 39040079 - 39039995
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||||| ||||| | |||||||| |||||||| |||| ||||| || |||||||||||| ||||| |||||||||||||    
T  39040079 aagattgttgacctagttcggtccaatatgacctaatct-ggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 3328443 - 3328345
Alignment:
Q  69 aagattgttgacccagttca-gccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||||  |||||||| ||||||||  | |||||||||||| || ||||||| || || |||||||||||||   |||||||||||    
T  3328443 aagattgttgacccagttcattccaatatgacctaatct-agaggagagagcagcccttcaatccactaagatgaaagtgttacaatgagttacaagaaa 3328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 4386975 - 4386947
Alignment:
Q  108 gggggagagagcagctctccaatccaata 136  Q
    |||||||||||||||||||||||||||||    
T  4386975 gggggagagagcagctctccaatccaata 4386947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 24695251 - 24695152
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||| ||||| | |||||||| ||||||||  ||| |||||||| | ||| |||||  ||||| |||||||||||||||| ||||||||||    
T  24695251 aagattgttgacctagttcggtccaatatgacctaatctacggg-agagagcaaccctctaatccgctatgatgaaagtgttacaaaagagttacaagaa 24695153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 6311272 - 6311443
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaa 142  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6311272 caagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaa 6311370  T
Q  143 agtgttacaaaaggttacaagaaactctagctatcaagctttacacaagacaaaccctaaattctaccctttg 215  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  6311371 agtgttacaaaaggttacaagaaactctagccttcaagctttacacaagacaaaccctagattctaccctttg 6311443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 7290032 - 7289865
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7290032 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 7289934  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  7289933 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctatattctaccctttg 7289865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 25328376 - 25328218
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25328376 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaa 25328278  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||  ||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  25328277 ggttacaag--actctagccttcaagctttacacatgaacaaaccctagattctaccctttg 25328218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 36979352 - 36979524
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  36979352 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatga 36979450  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||||||||| |||||||||||||    
T  36979451 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctaccctttg 36979524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 33037928 - 33037761
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaa 142  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33037928 caagaaaagaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaa 33037830  T
Q  143 agtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    ||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||||||||| |||||||||    
T  33037829 agtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctaccc 33037761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 18853290 - 18853117
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  18853290 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatataatga 18853192  T
Q  142 aagtgttacaaaa-ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||||||||| ||| |||||||||    
T  18853191 aagtgttacaaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaaaccctagattttaccctttg 18853117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 18870684 - 18870511
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  18870684 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcatccaatatggcctaatctg-ggggagagagcagctctccaatccaatataatga 18870586  T
Q  142 aagtgttacaaaa-ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||||||||| |||||||||||||    
T  18870585 aagtgttacaaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaaaccctagattctaccctttg 18870511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 10689264 - 10689097
Alignment:
Q  44 aagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaa 142  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  10689264 aagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatgaa 10689166  T
Q  143 agtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    ||||||||| | |||||||||||||  ||||  |||||| ||||||||| |||| ||||| |||||||||    
T  10689165 agtgttacagagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccc 10689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 58 - 215
Target Start/End: Original strand, 30655636 - 30655793
Alignment:
Q  58 aaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaagg 156  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| ||    
T  30655636 aaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatctaatatgatgaaagtgttacaaaggg 30655734  T
Q  157 ttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||  ||||  |||||| ||||||||| |||||||||| |||||||||||||    
T  30655735 ttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctaccctttg 30655793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 4760197 - 4760029
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  4760197 caagaaaggaagaacaaaacatcaagaagattgttgacccagttcagccaatatggcctaatat-gggggagagagcagctctccaatccaatatgatga 4760099  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||| ||||| |||||||||    
T  4760098 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccc 4760029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 39784921 - 39784776
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  39784921 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 39784824  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  39784823 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 39784776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 10684363 - 10684222
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  10684363 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 10684265  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  10684264 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 10684222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 35745381 - 35745524
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| |    
T  35745381 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggg-gagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 35745479  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    |||||||||  |||||| | |||||||||||||| | ||||||||||    
T  35745480 ttacaagaa--tctagcttttcaagctttacacatgaacaaacccta 35745524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 1262075 - 1261953
Alignment:
Q  45 agaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaa 142  Q
    ||||||||| |||||| ||||| | |||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||| |||    
T  1262075 agaaaggaagaacaaacacaccaaaaagattgttgacccagttcaaccaatatgacctaatctg-ggggagagagcagctctccaatccactatgatgaa 1261977  T
Q  143 agtgttacaaaaggttacaagaaa 166  Q
    ||||||||||| ||||||||||||    
T  1261976 agtgttacaaagggttacaagaaa 1261953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 26287875 - 26287985
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  26287875 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactatgatg 26287973  T
Q  141 aaagtgttacaa 152  Q
    ||||||||||||    
T  26287974 aaagtgttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 26301132 - 26301242
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  26301132 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactatgatg 26301230  T
Q  141 aaagtgttacaa 152  Q
    ||||||||||||    
T  26301231 aaagtgttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 26313126 - 26313236
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  26313126 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactatgatg 26313224  T
Q  141 aaagtgttacaa 152  Q
    ||||||||||||    
T  26313225 aaagtgttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 31071353 - 31071228
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga- 139  Q
    ||||||||||| |||||| ||||| | ||||||||||||| ||||| | |||||||| ||||||||||||| ||||||||||||||||||||| |||||     
T  31071353 caagaaaggaagaacaaacacaccaaaaagattgttgaccgagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgat 31071255  T
Q  140 gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||| ||||||||||||    
T  31071254 gaaagtgttacaaagggttacaagaaa 31071228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 26403327 - 26403240
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  26403327 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 4456028 - 4456126
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||| |||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  4456028 aagattgctgacccggttcggtccaatatggcctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 4456126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 7412344 - 7412439
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||||| | |||||||| |||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  7412344 attgttgacccagttcggtccaatatgacctaatatgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 7412439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 19175851 - 19175753
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||  |||||||||||    
T  19175851 aagattgttgacctagttcggtccaatatgacctaatctggggg-agagagcaactctccaatccactatgatgaaagtgttacaaagagttacaagaaa 19175753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 23799674 - 23799575
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||| ||| || |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  23799674 aagattgttgacccagttcggtccaatatgacctaatttggagg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 23799576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 4696693 - 4696609
Alignment:
Q  69 aagattgttgacccagttc-agccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| ||||| |||||||    
T  4696693 aagattgttgacccagttcgatccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaagagttacaa 4696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 6127224 - 6127320
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    ||||||||| |||||| | |||||||| |||||| |||||  ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  6127224 attgttgactcagttcggtccaatatgacctaatttgggga-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 6127320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 5702580 - 5702481
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||| | ||||||||||||| | |||||||||  ||||| |||||||||||||||| ||||||||||    
T  5702580 aagattgttgacccagttcggtccaatatgacctaatat-gggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaa 5702482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 9765914 - 9765852
Alignment:
Q  71 gattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatcca 133  Q
    ||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 19752491 - 19752393
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||| | |||||||| |||| ||| |||| ||||||||||||||||||||| || || |||||||||||||   |||||||||||    
T  19752491 aagattgttgacctagttcggtccaatatgacctagtctagggg-agagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa 19752393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 33079685 - 33079753
Alignment:
Q  73 ttgttgacccagttc-agccaatatggccta-atctggggggagagagcagctctccaatccaatatga 139  Q
    ||||| ||||||||| | |||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  33079685 ttgttaacccagttcgacccaatatgacctacatctggggggagagatcagctctccaatccactatga 33079753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 44 - 215
Target Start/End: Original strand, 31180190 - 31180360
Alignment:
Q  44 aagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaa 143  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31180190 aagaaagaaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaa 31180288  T
Q  144 gtgttacaaaaggttacaagaaactctagctatcaagctttacacaagacaaaccctaaattctaccctttg 215  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  31180289 gtgttacaaagggttacaagaaactctagccttcaagctttacacaagacaaaccctagattctaccctttg 31180360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 43592258 - 43592425
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43592258 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgagaaagtg 43592356  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  43592357 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 43592425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 1457271 - 1457101
Alignment:
Q  44 aagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaa 143  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  1457271 aagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatgtggcctaatctg-ggggagagagcagctctccaatccaatatgagaaa 1457173  T
Q  144 gtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  1457172 gtgttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 1457101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 27449793 - 27449960
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27449793 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatagcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtg 27449891  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  27449892 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 27449960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 15044665 - 15044831
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  15044665 aaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatatgggg-gagagagcagctctccaatccaatatgagaaagtg 15044763  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||||||||  ||||||||| |||||||||||||| | |||||||||| |||||||||||||    
T  15044764 ttacaaaaggttacaag--actctagctttcaagctttacacatgaacaaaccctagattctaccctttg 15044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 27444949 - 27445116
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27444949 aaaggaagaacaaaacaccgagaagattgttgacccagttcaggcaatatagcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtg 27445047  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  27445048 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 27445116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 43598703 - 43598870
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43598703 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtg 43598801  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  43598802 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 43598870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 43604195 - 43604362
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43604195 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtg 43604293  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  43604294 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 43604362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 43609687 - 43609854
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43609687 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtg 43609785  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  43609786 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 43609854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 44 - 215
Target Start/End: Original strand, 30631382 - 30631553
Alignment:
Q  44 aagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaa 143  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30631382 aagaaaggaagaacaaaacaccaagaagattgttgactcagttcagccaatgtggcctaatctgggg-gagagagcagctctccaatccaatatgagaaa 30631480  T
Q  144 gtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||| |||||||||||||||||||  |||||||||||||| | ||||||| || |||||||||||||    
T  30631481 gtgttacaaagggttacaagaaactctagccttcaagctttacacatgaacaaaccatagattctaccctttg 30631553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 28807671 - 28807514
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  28807671 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctg-ggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 28807574  T
Q  154 aggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||  ||||||| |||||||||||||| | |||||||||| | |||||||||||    
T  28807573 aggttacaagaa--tctagctttcaagctttacacatgaacaaaccctaga-tctaccctttg 28807514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 37556721 - 37556575
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  37556721 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaaagtgttacaaa 37556623  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    |||||||||| |  |||||| |||||||||||||||| | ||||||||||    
T  37556622 aggttacaagta--tctagcttatcaagctttacacatgaacaaacccta 37556575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 37561543 - 37561397
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  37561543 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaaagtgttacaaa 37561445  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    |||||||||| |  |||||| |||||||||||||||| | ||||||||||    
T  37561444 aggttacaagta--tctagcttatcaagctttacacatgaacaaacccta 37561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 31397088 - 31396951
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| |    
T  31397088 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaagag 31396990  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  31396989 ttacaagaa--tctagcttatcaagctttacacaagacaaa 31396951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 31401945 - 31401808
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||||||| |    
T  31401945 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatatggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaagag 31401847  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  31401846 ttacaagaa--tctagcttatcaagctttacacaagacaaa 31401808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 38192147 - 38192271
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  38192147 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactatgatg 38192245  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  38192246 aaagtgttacaaagggttacaagaaa 38192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 38219372 - 38219496
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  38219372 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactatgatg 38219470  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  38219471 aaagtgttacaaagggttacaagaaa 38219496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 33768169 - 33768312
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |    
T  33768169 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggggg-gagagcagctctccaatccaatatgtgaatgtgttacaaaagag 33768267  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    |||||||||  |||||| | |||||||||||||| | ||||||||||    
T  33768268 ttacaagaa--tctagcttttcaagctttacacatgaacaaacccta 33768312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 35387636 - 35387760
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |    
T  35387636 caagaaaggaagaacaaacacaccaaaaagattgttgacccaattcagccaatatggcctaatct-gggggagagagcagctctccaatctactatgatg 35387734  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  35387735 aaagtgttacaaagggttacaagaaa 35387760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 2785365 - 2785472
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| |    
T  2785365 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggg-gagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 2785463  T
Q  157 ttacaagaa 165  Q
    |||||||||    
T  2785464 ttacaagaa 2785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 33791306 - 33791449
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||| |    
T  33791306 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatct-gggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagag 33791404  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    |||||||||  |||||| | |||||||||||||| | ||||||||||    
T  33791405 ttacaagaa--tctagcttttcaagctttacacatgaacaaacccta 33791449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 24135826 - 24135946
Alignment:
Q  47 aaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaag 144  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || || || |||||    
T  24135826 aaaggaagaacaaacacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctatccaatgcactaagatgaaag 24135924  T
Q  145 tgttacaaaaggttacaagaaa 166  Q
    ||||||||| ||||||||||||    
T  24135925 tgttacaaagggttacaagaaa 24135946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 9353429 - 9353331
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  9353429 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 9353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 36932447 - 36932349
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  36932447 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 36932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 10281751 - 10281850
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| ||| |||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  10281751 aagattgttgacccagttcggtccaatatgacctgatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10281849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 15464532 - 15464630
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | ||||||||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  15464532 aagattgttgacccagttcggtccaatatgatctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 15464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 11917068 - 11916970
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||||| | |||||||| |||||| |||||| ||||||||||||||||||||| ||| | |||||||||||||||| |||||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatggggg-agagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaa 11916970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 14520230 - 14520328
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||| ||||| ||||||||||||||  |||||||||||    
T  14520230 aagattgttgacccagttcggtccaatatgacctaatctaggggg-gagagcagctcttcaatccactatgatgaaagtgttacaaagagttacaagaaa 14520328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 3880299 - 3880398
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||||||||  |||||| | |||||||| ||||||||| ||  ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  3880299 aagattgttgattcagttctgtccaatatgacctaatctgaggc-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 3880397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 12084269 - 12084174
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||||| | ||| |||| |||||| |||||  ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  12084269 attgttgacccagttcggtccactatgacctaatatggggc-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 12084174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 17004057 - 17003970
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||| ||||||| ||||| |||||| || ||||||    
T  17004057 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctcttcaatccactatgatgaaagtatttcaaaag 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 19588746 - 19588845
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | ||||||||  |||||||  ||| |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  19588746 aagattgttgacccagttcggtccaatatgaactaatcttaggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 19588844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 28832259 - 28832357
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||| |||| | |||||||| |||||||||||| ||||||||||| |||||||||| || || |||||||||||||   |||||||||||    
T  28832259 aagattgttgacccggttcggtccaatatgacctaatctgggg-gagagagcagccctccaatccactaagatgaaagtgttacaatgagttacaagaaa 28832357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 42127507 - 42127409
Alignment:
Q  69 aagattgttgacccagttc-agccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | | |||||| |||||||| ||||||||||||||| | |||||||| || || |||||||||||||   |||||||||||    
T  42127507 aagattgttgacccagttcgatctaatatgacctaatct-gggggagagagcagccccccaatccactaagatgaaagtgttacaatgagttacaagaaa 42127409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 4410301 - 4410241
Alignment:
Q  73 ttgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatcca 133  Q
    ||||||||||||||| | ||||| || |||| |||||||| |||||||||||||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgacctagtctggggg-agagagcagctctccaatcca 4410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 22010803 - 22010636
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22010803 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 22010705  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  22010704 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 22010636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 58 - 215
Target Start/End: Original strand, 11856964 - 11857120
Alignment:
Q  58 aaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggt 157  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11856964 aaaacaccaagaagattgttgacccagttcagccaatatggcctaatatgggg-gagagagcagctctccaatccaatatgagaaagtgttacaaaaggt 11857062  T
Q  158 tacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  11857063 tacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 11857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 14737674 - 14737516
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14737674 aacaaaacaccgagaagattgttgatccagttcagccaatatggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaa 14737576  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||  ||||||||  |||||||||||| | | |||||||||| |||||||||||||    
T  14737575 ggttacaag--actctagccttcaagctttacatatgaacaaaccctagattctaccctttg 14737516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 28184492 - 28184650
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  28184492 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatctaatatgagaaagtgttacaaaa 28184590  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||  | ||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  28184591 ggttaca--acactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 28184650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 14742534 - 14742376
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14742534 aacaaaacaccgagaagattgttgacccagttcagccaatatgacctaatttggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaa 14742436  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||  ||||||||  |||||||||||| | | |||||||||| |||||||||||||    
T  14742435 ggttacaag--actctagccttcaagctttacatatgaacaaaccctagattctaccctttg 14742376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 28155668 - 28155510
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28155668 aacaaaacaccgaacaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaa 28155570  T
Q  154 aggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||  | ||||| |||||||||||||| | |||||||||| | |||||||||||    
T  28155569 aggttacaagaa--tttagctttcaagctttacacatgaacaaaccctaga-tctaccctttg 28155510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 6438487 - 6438632
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  6438487 aacaaaacaccgagcaagattgttgtcccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 6438584  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| | |||||||||||||| | ||||||||||    
T  6438585 aggttacaag--actctagcttgtcaagctttacacatgaacaaacccta 6438632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 5674865 - 5674719
Alignment:
Q  70 agattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaact 168  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||     
T  5674865 agattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 5674767  T
Q  169 ctagctatcaagctttacacaag--acaaaccctaaattctaccctttg 215  Q
     |||||  ||||| |||||||||  ||||  |||| |||||||||||||    
T  5674766 atagcttgcaagc-ttacacaagaaacaagacctagattctaccctttg 5674719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 33330529 - 33330403
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagaaac 167  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||      
T  33330529 aagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa-- 33330433  T
Q  168 tctagc-tatcaagctttacacaagacaaa 196  Q
    |||||| |||||||||||||||| ||||||    
T  33330432 tctagcttatcaagctttacacatgacaaa 33330403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 215
Target Start/End: Original strand, 16838734 - 16838890
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| |    
T  16838734 aaacaccgagcaagattgttgacccagttcagccaatgtggcttaatctgggg-gagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 16838832  T
Q  157 ttacaagaaactctagcta-tcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||  |||||||| |||||||||||||| | |||||||||| | |||||||||||    
T  16838833 ttacaagaa--tctagctattcaagctttacacatgaacaaaccctaga-tctaccctttg 16838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 6005407 - 6005550
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||| |    
T  6005407 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctgggg-gagagagcagctctccaatccaatatgtgaatgtgttacaaaagag 6005505  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    |||||||||  |||||| | |||||||||||||| | ||||||||||    
T  6005506 ttacaagaa--tctagcttttcaagctttacacatgaacaaacccta 6005550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 33336026 - 33335900
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagaaac 167  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||      
T  33336026 aagattgttgacccagttcagccaatgtgacctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaa-- 33335930  T
Q  168 tctagc-tatcaagctttacacaagacaaa 196  Q
    |||||| |||||||||||||||| ||||||    
T  33335929 tctagcttatcaagctttacacatgacaaa 33335900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 5757575 - 5757477
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  5757575 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 5757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 21356036 - 21356134
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||||||| || ||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  21356036 aagattgttgacccagttcggtccaatatgacctaatctggagg-agagagcagctctccaatccactatgatgaaagtgttactaagagttacaagaaa 21356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 5572338 - 5572239
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||| ||| | |||||||| |||||||| |||| |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  5572338 aagattgttgacccaattcggtccaatatgacctaatctagggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 5572240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 10077262 - 10077163
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttac-aaaaggttacaagaa 165  Q
    ||||||||||||||| ||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| ||||||||||| |||| ||||||||||    
T  10077262 aagattgttgacccaattcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaagtgttacaaaaaagttacaagaa 10077164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 31086570 - 31086471
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||| |||||||| |||||||||||| ||||| |||||||||||||| | ||||||||||    
T  31086570 aagattgttgacccagttcagtccaatatgatctaatctagggg-agagagcaactctccaatccactatgatgaaagtgttacaaaggagttacaagaa 31086472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 22963700 - 22963798
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| |  ||||||| || |||||||||  |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  22963700 aagattgttgacccagttcggtgcaatatgaccaaatctgggg--agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 22963797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 23824693 - 23824595
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| |  ||||||| || |||||||||  |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  23824693 aagattgttgacccagttcggtgcaatatgaccaaatctgggg--agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 23824596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 4629954 - 4630053
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaagaa 165  Q
    |||||||||||| |||||||| |||||||| |||||||| |||  ||||||||||||||||||||| || || |||||||||||||||  ||||||||||    
T  4629954 aagattgttgactcagttcagtccaatatgacctaatctaggga-agagagcagctctccaatccactaagatgaaagtgttacaaaatagttacaagaa 4630052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 31979513 - 31979612
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| | |||||||||| ||||||||||| |||||||||| || || ||||||||| |||||| ||||||||||    
T  31979513 aagattgttgacccagttcggtccaatatgacataatctgggg-gagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaagaa 31979611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 5343471 - 5343524
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggg 111  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  5343471 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctagggg 5343524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 21801429 - 21801342
Alignment:
Q  81 ccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    ||||||||| |||||||| ||||||||||||| || |||||||||||||||||| || ||  ||||||||||||||| |||||||||||    
T  21801429 ccagttcagtccaatatgacctaatctggggg-agcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaa 21801342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 22708992 - 22709102
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga- 139  Q
    ||||||||||| |||||| ||||| | || |||||||||| ||||| |  |||||||  ||||||||||| |||||||||||||||||||||| |||||     
T  22708992 caagaaaggaagaacaaacacaccaaaaa-attgttgacctagttcggttcaatatgatctaatctgggg-gagagagcagctctccaatccactatgat 22709089  T
Q  140 gaaagtgttacaa 152  Q
    |||||||||||||    
T  22709090 gaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 18232867 - 18232944
Alignment:
Q  90 ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||| |||||||| ||||||||||||| | ||||||| || ||||| |||||||||||||||| |||||||||||    
T  18232867 ccaatatgacctaatct-gggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaagaaa 18232944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 5017566 - 5017482
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||||||||||| | | |||||| ||||||||  |||||||||||| | |||||||| | ||||| |||||||||||||    
T  5017566 aagattgttgacccagttcggtcaaatatgacctaatct-aggggagagagcaaccctccaatctactatgatgaaagtgttacaa 5017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 31936587 - 31936651
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatcca 133  Q
    ||||||||||||| ||||| | |||||||| |||| |||||| | |||||||||||||||||||||    
T  31936587 aagattgttgacctagttcggtccaatatgacctagtctgggag-agagagcagctctccaatcca 31936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 44312730 - 44312563
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44312730 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 44312632  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  44312631 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 39812086 - 39811928
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39812086 aacaaaacaccgagaagattgttgaaccagttcagccaatatggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaa 39811988  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||  ||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  39811987 ggttacaag--actctagccttcaagctttacacatgaacaaaccctagattctaccctttg 39811928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 11099048 - 11098877
Alignment:
Q  44 aagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaa 142  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  11099048 aagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgatgaa 11098950  T
Q  143 agtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||| |||||||||||||  |||||  ||||| ||||||||| |||||||||| |||||||||||||    
T  11098949 agtgttacaaagggttacaagaaacaatagcttgcaagc-ttacacaagaacaaaccctagattctaccctttg 11098877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 32246766 - 32246933
Alignment:
Q  47 aaaggaataacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagt 145  Q
    ||||||| |||||||||||||  |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32246766 aaaggaagaacaaaacaccgaacaagattgttgaccttgttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagt 32246864  T
Q  146 gttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| | |||||||||| ||| |||||||||    
T  32246865 gttacaaaaggttacaag--actctagctttcaagctttacacatgaacaaaccctagattataccctttg 32246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 14291463 - 14291631
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  14291463 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatga 14291561  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||| ||||| |||||||||    
T  14291562 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaagccctagattctaccc 14291631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 9296523 - 9296355
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  9296523 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaat-ttgggggagagagcagctctccaatccaatatgatga 9296425  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||| ||||| |||| ||||| |||||||||    
T  9296424 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttatacaagaacaagccctagattctaccc 9296355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 3491725 - 3491848
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  3491725 caagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactatgatg 3491822  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  3491823 aaagtgttacaaagggttacaagaaa 3491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 25398469 - 25398593
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |    
T  25398469 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatgacctaatct-gggggagagagcagctctccaatccactatgatg 25398567  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  25398568 aaagtgttacaaagggttacaagaaa 25398593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 19344407 - 19344554
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||    
T  19344407 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctagggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 19344505  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    || ||||||||||  |||||| | |||||||||||||| | ||||||||||    
T  19344506 agagttacaagaa--tctagcttttcaagctttacacatgaacaaacccta 19344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 19349265 - 19349412
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||    
T  19349265 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctagggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 19349363  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    || ||||||||||  |||||| | |||||||||||||| | ||||||||||    
T  19349364 agagttacaagaa--tctagcttttcaagctttacacatgaacaaacccta 19349412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 25403607 - 25403731
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |    
T  25403607 caagaaaggaagaacaaacacaccaaaaagattgttgactcagttcagccaatatgacctaatct-gggggagagagcagctctccaatccactatgatg 25403705  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  25403706 aaagtgttacaaagggttacaagaaa 25403731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 40738820 - 40738926
Alignment:
Q  45 agaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaa 142  Q
    ||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||| |||    
T  40738820 agaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatctggggg--gagagcagctctccaatccactatgatgaa 40738916  T
Q  143 agtgttacaa 152  Q
    ||||||||||    
T  40738917 agtgttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 21629944 - 21630042
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  21629944 aagattgttgacccagttcagtccaatatgacctaatctgggg--agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 21630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 8040060 - 8040147
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  8040060 aagattgttgacccagttcagtccaatatgacctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 13569331 - 13569427
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 13569427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 28259274 - 28259176
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  28259274 aagattgttgacccagttcggtccaatatgacctaatttggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 28259176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 10445541 - 10445442
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||| ||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||| ||||||||||    
T  10445541 aagattgttgatccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaa 10445443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 17865203 - 17865302
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||||| | |||||| |||||||| ||||||||||||| | |||||||||| ||||| |||||||||||||||| ||||||||||    
T  17865203 aagattgttgacccagttcagtcgaatatgacctaatct-gggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 17865301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 20522220 - 20522319
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||| | |||||||||| ||||| ||||||||||||||| |||||||||||    
T  20522220 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaa 20522318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 34682431 - 34682332
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| | ||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||| ||||||||||    
T  34682431 aagattgttgacccagttcggtccaatatgacataatctggggg-agagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaa 34682333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 34388859 - 34388957
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggg-gagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 34388957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 14699104 - 14699006
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| ||||| |||||||||| ||||||||||    
T  14699104 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaagaa 14699007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 25407653 - 25407720
Alignment:
Q  99 cctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  25407653 cctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 25407720  T

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Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 10707348 - 10707250
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||||| | |||||||| |||||| |||||| ||||| || |||||||||||| ||||| |||||||||||||||| |||||||||||    
T  10707348 agattgttgacccagttcggtccaatatgacctaatatggggg-agagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 10707250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 8390244 - 8390148
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||| | |||| ||| |||||| |||||| ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||    
T  8390244 attgttgacccagttcggtccaaaatgacctaatttggggg-agagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaa 8390148  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 31056044 - 31056131
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||| ||||| |  ||||||| |||||||| |||| ||||||||||||||||||||| || || ||||||||||||||||    
T  31056044 aagattgttgacctagttcggttcaatatgacctaatctagggg-agagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 33528718 - 33528619
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||| | |||  |||||||| | |||||||||| ||||| |||||||||||||||| ||||||||||    
T  33528718 aagattgttgacccagttcggtccaatatgacctaatat-gggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 33528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 39482931 - 39483030
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||| ||||| | |||||||| |||||| ||||| ||||||||||  |||||||||| ||||| |||| ||||||||||| ||||||||||    
T  39482931 aagattgttgacctagttcggtccaatatgacctaatatgggg-gagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaa 39483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 23078567 - 23078469
Alignment:
Q  69 aagattgttgacccagttc-agccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||| |||||||||||||| | |||||||| |||||| |||||| ||||| || |||||||||||| ||||| |||||||||| |||  |||||||||||    
T  23078567 aagaatgttgacccagttcgatccaatatgacctaatatggggg-agagaacaactctccaatccactatgatgaaagtgttagaaagagttacaagaaa 23078469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 36757859 - 36757761
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||| ||| | |||||||| |||||||||||||| || | ||||||||||||||| ||||| ||||||||| ||||  |||| ||||||    
T  36757859 aagattgttgacccaattcggtccaatatgacctaatctgggggg-gataacagctctccaatccagtatgatgaaagtgtttcaaagagttataagaaa 36757761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 42039766 - 42039668
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||| | ||||| | |||||||| ||||||||| ||| |||||||||||||| |||||| ||||| ||||||||||| ||  |||||||||||    
T  42039766 aagattgttgatctagttcggtccaatatgacctaatctgtggg-agagagcagctctctaatccactatgatgaaagtgttacgaagagttacaagaaa 42039668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 16940306 - 16940219
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||| ||| | |||||||| | ||||||||||| | ||| |||| |||||||||| ||||| ||||||||||||||||    
T  16940306 aagattgttgacccaattcggtccaatatgacataatctgggggaa-agatcagccctccaatccactatgatgaaagtgttacaaaag 16940219  T

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Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 17010971 - 17010884
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||| ||| | |||||||| | ||||||||||| | ||| |||| |||||||||| ||||| ||||||||||||||||    
T  17010971 aagattgttgacccaattcggtccaatatgacataatctgggggaa-agatcagccctccaatccactatgatgaaagtgttacaaaag 17010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 33118136 - 33118235
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaagaa 165  Q
    |||||||||| | |||||| | |||||||| |||||| ||||| ||||||||||| |||||||||| ||||| ||||| |||||||||  ||||||||||    
T  33118136 aagattgttggctcagttcggtccaatatgacctaatttgggg-gagagagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaa 33118234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 41398184 - 41398381
Alignment:
Q  20 acaaagagataacaaagcatagacaaga----aaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggaga 115  Q
    ||||||||||| ||||||||| ||||||    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  41398184 acaaagagataccaaagcataaacaagataagaaggaagaacaaaacaccgagaagattgttgacccaggtcagccaatatggcctaatctgggg-gaga 41398282  T
Q  116 gagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctacccttt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||| | |||||||||| ||||||||||||    
T  41398283 gagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaaccctagattctacccttt 41398380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 41390529 - 41390726
Alignment:
Q  20 acaaagagataacaaagcatagacaaga----aaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggaga 115  Q
    ||||||||||| ||||||||| ||||||    |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  41390529 acaaagagatatcaaagcataaacaagataagaaggaagaacaaaacatcgagaagattgttgacccagatcagccaatatggcctaatctgggg-gaga 41390627  T
Q  116 gagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctacccttt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||| | |||||||||| ||||||||||||    
T  41390628 gagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaaccctagattctacccttt 41390725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 24787482 - 24787314
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24787482 aaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatctgggggg-gagagcagctctccaatccaatatgagaaagtg 24787384  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||| |||||||||||||  ||||  |||||| ||||||||| ||||| |||| |||||||||||||    
T  24787383 ttacaaagggttacaagaaacaatagccttcaagcattacacaagaacaaatcctagattctaccctttg 24787314  T

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Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 25445188 - 25445042
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25445188 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaa 25445090  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  25445089 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 25445042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 39445486 - 39445631
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  39445486 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 39445583  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  39445584 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 39445631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 1055110 - 1054965
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||    
T  1055110 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcaactctccaatccaatatgtg-aagtgttacaaa 1055013  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  1055012 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 1054965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 44023972 - 44023827
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||    
T  44023972 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 44023875  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| | |||||||||||||| | ||||||||||    
T  44023874 aggttacaag--actctagcttgtcaagctttacacatgaacaaacccta 44023827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 24202892 - 24202768
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |    
T  24202892 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccactatgatg 24202794  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  24202793 aaagtgttacaaagggttacaagaaa 24202768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 43988563 - 43988422
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  43988563 aacaaaacaccaagcaagattgtttacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 43988465  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  43988464 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 43988422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 19358939 - 19358842
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  19358939 aagattgttgacccagttcagtcaatatgacctaatat-gggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 19358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 19361528 - 19361431
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  19361528 aagattgttgacccagttcagtcaatatgacctaatat-gggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 19361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 19380168 - 19380071
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  19380168 aagattgttgacccagttcagtcaatatgacctaatat-gggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 19380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 26644994 - 26644896
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  26644994 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccattatgatgaaagtgttacaaagagttacaagaaa 26644896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 19072928 - 19073027
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||| || || |||||||||||||||| ||||||||||    
T  19072928 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 19073026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 19120818 - 19120917
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||| || || |||||||||||||||| ||||||||||    
T  19120818 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 19120916  T

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Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 47704033 - 47703946
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  47704033 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

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Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 16124613 - 16124514
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||||||||| |||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  16124613 aagattgttgactcagttcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16124515  T

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Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 27104469 - 27104370
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||||||||| |||||| | |||||||  ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  27104469 aagattgttgacacagttcggtccaatataacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 27104371  T

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Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 3281708 - 3281806
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||| |||||||||||| | |||||||| |||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||  |||||||||||    
T  3281708 aagattattgacccagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaagaaa 3281806  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 9476261 - 9476348
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| ||||| |||||| |||||||||    
T  9476261 aagattgttgacccagttcggtccaatatgacctaatctagggg-agagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 13598398 - 13598485
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| || ||||||| ||||| ||||||||||||||||    
T  13598398 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

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Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 29651811 - 29651898
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    |||||| |||||||||||| | |||||||| |||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||    
T  29651811 aagatttttgacccagttcggtccaatatgacctaatctgggg-gagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 37069770 - 37069864
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaa 162  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||| |||||| ||||| ||||| ||||||||||||||  |||||||    
T  37069770 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcatctctccgatccactatgatgaaagtgttacaaagagttacaa 37069864  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 775672 - 775759
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||| ||| | |||||||| |||||||||||| ||||||| |||||||||||||| || || ||||||||||||||||    
T  775672 aagattgttgacccaattcggtccaatatgacctaatctgggg-gagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

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Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 13604720 - 13604622
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||  |  ||||||| |||||| |||||| ||||||||||||||||||||| ||||| |||| |||||||||  |||||||||||    
T  13604720 aagattgttgacccagttaggttcaatatgacctaatatggggg-agagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaaa 13604622  T

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Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 21536666 - 21536568
Alignment:
Q  69 aagattgttgacccagttcagccaata-tggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| |  || | || ||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||  |||||||||||    
T  21536666 aagattgttgacccagttcggtaaaaaatgacctaatctggggg-agagagcagctctccaatccactataatgaaagtgttacaaagagttacaagaaa 21536568  T

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Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 47098921 - 47098823
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| || |||||||||| |||||||||| |||||||||| || || |||||||||||||   |||||||||||    
T  47098921 aagattgttgacccagttcggtccaatatgaccgaatctggggg-agagagcagccctccaatccactaagatgaaagtgttacaatgagttacaagaaa 47098823  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 32889439 - 32889537
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||| | ||||| | |||||||| |||| |||||||| | ||||||||||||||||||| || || |||||||||||||   |||||||||||    
T  32889439 aagattgttgatctagttcggtccaatatgacctagtctggggg-atagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa 32889537  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 47102935 - 47102840
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||||| | |||||||| |||||||| |||| ||||||||||  ||||||||| || || |||| ||||||||   |||||||||||    
T  47102935 attgttgacccagttcggtccaatatgacctaatctagggg-agagagcagccatccaatccactaagatgaaaatgttacaatgagttacaagaaa 47102840  T

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Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 51520436 - 51520603
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  51520436 aaaggaagaacaaaacaccgagaagattgttgacccagttctgccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtg 51520534  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  51520535 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 51520603  T

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Target: chr4; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 45357394 - 45357236
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45357394 aacaaaacaccgagaagattgttgacccagttcagccaatatggcataatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaa 45357296  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||  ||||||||| |||||||||||||| | |||||||||| |||||||||||||    
T  45357295 ggttacaag--actctagctttcaagctttacacatgaacaaaccctagattctaccctttg 45357236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 9224513 - 9224346
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9224513 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 9224415  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||| ||| |||||||||  |||||||||||||| | |||||||||| | |||||||||||    
T  9224414 ttacaaaaggttagaag-aactctagccttcaagctttacacatgaacaaaccctagactctaccctttg 9224346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 9229300 - 9229133
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9229300 aaaggaagaacaaaacaccgagaagattgttaacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 9229202  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||| ||| |||||||||  |||||||||||||| | |||||||||| | |||||||||||    
T  9229201 ttacaaaaggttagaag-aactctagccttcaagctttacacatgaacaaaccctagactctaccctttg 9229133  T

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Target: chr4; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 45347915 - 45347756
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45347915 aacaaaacaccgagaagattgttgacccagttcagccaatatggcttaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaa 45347817  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||| | |||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  45347816 ggttacaag-acctctagccttcaagctttacacatgaacaaaccctagattctaccctttg 45347756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 24741915 - 24742087
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  24741915 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatga 24742013  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||| |||||||||||||  ||||  |||||| ||||||||| |||||||||| |||||||||||||    
T  24742014 aagtgttacaaagggttacaagaaacaatagccttcaagc-ttacacaagaacaaaccctagattctaccctttg 24742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 56146817 - 56146664
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  56146817 aaaggaagaacaaaacaccgagaagattgttggtccagttcagccaatatggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtg 56146719  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | ||||||||||    
T  56146718 ttacaaaaggttacaag-aactctagccttcaagctttacacatgaacaaacccta 56146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 3813998 - 3814168
Alignment:
Q  43 caagaaaggaataacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgaga 141  Q
    ||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  3813998 caagaaaggaagaacaaaacaccatgcaagattgttgacccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgtga 3814096  T
Q  142 aagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||| | |||||||||| | |||||||||||    
T  3814097 aagtgttacaaaaggttacaag--actctagctttcaagctttacacatgaacaaaccctaga-tctaccctttg 3814168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 5732666 - 5732809
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaact 168  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  5732666 aagattgttgacccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--act 5732762  T
Q  169 ctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||| |||||||||||||| | |||||||||| | |||||||||||    
T  5732763 ctagctttcaagctttacacatgaacaaaccctaga-tctaccctttg 5732809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 29760616 - 29760740
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  29760616 caagaaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatga 29760714  T
Q  142 aagtgttacaaaaggttacaagaaac 167  Q
    |||||||||||| |||||||||||||    
T  29760715 aagtgttacaaagggttacaagaaac 29760740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 18855713 - 18855858
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  18855713 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 18855810  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  18855811 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 18855858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 28468651 - 28468542
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||| |    
T  28468651 caagaaaggaagaacaaacacaccaa-aagattgttgacccagttcagccaatatgacctaatct-ggaggagagagcagctctccaatccactatgatg 28468554  T
Q  141 aaagtgttacaa 152  Q
    ||||||||||||    
T  28468553 aaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 31985756 - 31985633
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga- 139  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||| | |||||||| ||||||||||||  ||||||||||||||||||||| |||||     
T  31985756 caagaaaggaagaacaaacacaccaa-aagattgttgacccagttcggtccaatatgacctaatctgggg--agagagcagctctccaatccactatgat 31985660  T
Q  140 gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||| ||||||||||||    
T  31985659 gaaagtgttacaaagggttacaagaaa 31985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 10047379 - 10047478
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  10047379 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 10047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 39245994 - 39246093
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  39245994 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 39246092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 36315326 - 36315228
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||| |||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  36315326 aagaatgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 36315228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 36329535 - 36329437
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||| |||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  36329535 aagaatgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 36329437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 16623390 - 16623291
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| |  ||||||| |||||||||| || ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  16623390 aagattgttgacccagttcggttcaatatgacctaatctggagg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 16623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 5396768 - 5396670
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||||||| || ||||||||||||||||||||| ||||| ||||||||| ||||  |||||||||||    
T  5396768 aagattgttgacccagttcggtccaatatgacctaatctggagg-agagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaagaaa 5396670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 3796616 - 3796517
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||| |||||| |||||||| ||||| |||||| ||||| |||||||||||||||| ||||||||||    
T  3796616 aagattgttgacccagttccgtccaatatgacctaatatggggg-agagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaa 3796518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 38152536 - 38152449
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatat-gagaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| | ||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||    
T  38152536 aagattgttgacccagttcggtccaatatgacataatctggggg-agagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 5143260 - 5143345
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 154  Q
    |||||||||||| ||||| | |||||||| |||||||||||| |||||||||||||||||| ||| ||||| |||||||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggg-gagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 5269288 - 5269204
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||    
T  5269288 aagattgttgacctagttcggtccaatatgacctaatctggggg-agagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 5147678 - 5147776
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaagaaa 166  Q
    |||||||||||||||||| | |||||||| |||||| |||||| || ||||||||||||| |||| ||||| |||||||||||||||  |||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttggggg-agggagcagctctccagtccattatgatgaaagtgttacaaaatagttacaagaaa 5147776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 3777550 - 3777647
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||||||| | |||||||  |||||||| | || |||||| |||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  3777550 agattgttgacccagttcggtccaatataacctaatctagagg-agagagtagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 3777647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 16630773 - 16630678
Alignment:
Q  73 ttgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    ||||||||| ||||| | |||||||| | |||||||| || ||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  16630773 ttgttgacctagttcggtccaatatgacataatctggagg-agagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaa 16630678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 24333809 - 24333896
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||| || |||||| | |||||||| |||||| ||||| |||||||||||||||||||||| ||||| ||| ||||||||||||    
T  24333809 aagattgttaactcagttcggtccaatatgacctaatttgggg-gagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 6743507 - 6743425
Alignment:
Q  74 tgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    |||||||||||||| | |||||||| ||||||||  ||| |||||||||| |||||||||| ||||| ||||||||||||||||    
T  6743507 tgttgacccagttcggtccaatatgacctaatctacggg-agagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 42599671 - 42599571
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggg-gagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaa 165  Q
    ||||||||||||||| ||||| |||||||| | |||| |||||| ||||||||| | |||||||||| || || |||| ||||||||   ||||||||||    
T  42599671 aagattgttgacccaattcagtccaatatgacataatatgggggagagagagcaaccctccaatccactaagatgaaaatgttacaatgagttacaagaa 42599572  T
Q  166 a 166  Q
    |    
T  42599571 a 42599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 54867184 - 54867269
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 154  Q
    ||||||||||||||||||| | |||||||| |||| |||  |||||||||||||| || ||||| | ||||| |||| ||||||||||    
T  54867184 aagattgttgacccagttcggtccaatatgacctagtct--ggggagagagcagcccttcaatcaactatgatgaaaatgttacaaaa 54867269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 9752 - 9583
Alignment:
Q  43 caagaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaa 142  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9752 caagaaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaa 9654  T
Q  143 agtgttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||| | |||||||||| | |||||||||||    
T  9653 agtgttacaaaaggttacaag--actctagccttcaagctttacacatgaacaaaccctaga-tctaccctttg 9583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 35168 - 35001
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35168 aaaggaagaacaaaacaccgagaagattgttaacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccaatatgagaaagtg 35070  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||| ||| |||||||||  |||||||||||||| | |||||||||| | |||||||||||    
T  35069 ttacaaaaggttagaag-aactctagccttcaagctttacacatgaacaaaccctagactctaccctttg 35001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 12406318 - 12406477
Alignment:
Q  55 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  12406318 aacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatct-gggggagagaatagctctccaatccaatatgagaaagtgttacaaaa 12406416  T
Q  155 ggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||| |||||||||  |||||||||||||| | |||||||||| |||||||||||||    
T  12406417 ggttacaag-aactctagccttcaagctttacacatgaacaaaccctagattctaccctttg 12406477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 12396893 - 12397057
Alignment:
Q  50 ggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgtta 149  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  12396893 ggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatct-gggggagagaacagctctccaatccaatatgagaaagtgtta 12396991  T
Q  150 caaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||||||||||| |||||||||  | || ||||||||| | |||||||||| |||||||||||||    
T  12396992 caaaaggttacaag-aactctagcctttaatctttacacatgaacaaaccctagattctaccctttg 12397057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 31109690 - 31109523
Alignment:
Q  47 aaaggaataacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagt 145  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  31109690 aaaggaagaacaaaacaccgaacaagattgttgacccagttcagccaatatggcctaatctagggg-agagagcagctctccaatccaatatgagaaagt 31109592  T
Q  146 gttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    ||||||||||||||||||  ||||||||  ||||||||| |||| | |||||||||| |||||||||||||    
T  31109591 gttacaaaaggttacaag--actctagccttcaagctttgcacatgaacaaaccctagattctaccctttg 31109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 47 - 192
Target Start/End: Complemental strand, 20357665 - 20357521
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  20357665 aaaggaagaacaaaataccaagaagattgttgacccagttcagccaatatggcctaatttggggg-agagagcagctctccaatccaatatgagaaagtg 20357567  T
Q  147 ttacaaaaggttacaagaaactctagctatcaagctttacacaaga 192  Q
    ||||||| |||||||||||||  ||||  |||||||||||||||||    
T  20357566 ttacaaagggttacaagaaacaatagccttcaagctttacacaaga 20357521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 4866709 - 4866820
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtg 146  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4866709 aaaggaagaacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgagaaagtg 4866807  T
Q  147 ttacaaaaggtta 159  Q
    |||||||||||||    
T  4866808 ttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 69 - 215
Target Start/End: Complemental strand, 24024410 - 24024266
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaact 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||    
T  24024410 aagattgttgacccagttcagccaatatggcctaatctggggg-agagagcagctctccaatccaatatgagaaagtgttacaaaatgttacaag--act 24024314  T
Q  169 ctagctatcaagctttacacaag-acaaaccctaaattctaccctttg 215  Q
    |||||  |||||||||||||| | |||||||||| |||||||||||||    
T  24024313 ctagccttcaagctttacacatgaacaaaccctagattctaccctttg 24024266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 2057944 - 2058108
Alignment:
Q  47 aaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagt 145  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  2057944 aaaggaagaacaaaacaccaagaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgatgaaagt 2058042  T
Q  146 gttacaaaaggttacaagaaactctagctatcaagctttacacaag-acaaaccctaaattctaccc 211  Q
    |||||||| |||||||||||||  ||||  |||||| ||||||||| |||| ||||| |||||||||    
T  2058043 gttacaaagggttacaagaaacaatagcattcaagc-ttacacaagaacaagccctagattctaccc 2058108  T

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Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 19992299 - 19992445
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  19992299 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatctgggg-gagagagcagctctccaatccaatatgtgaaagtgttacaaa 19992397  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  19992398 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 19992445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 24261422 - 24261281
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  24261422 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 24261324  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  24261323 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 24261281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 24266301 - 24266160
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  24266301 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 24266203  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  24266202 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 24266160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 1533567 - 1533393
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    |||||||| || |||||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |    
T  1533567 caagaaagaaagaacaaacacaccaataagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcatctctccaatccaatatgatg 1533469  T
Q  141 aaagtgttacaaaaggttacaagaaactctagctatcaagctttacacaag--acaaaccctaaattctaccctttg 215  Q
    ||||||||||||| |||||||||||||  |||||  ||||| |||||||||  ||||  |||| |||||||||||||    
T  1533468 aaagtgttacaaagggttacaagaaacaatagcttgcaagc-ttacacaagaaacaagacctagattctaccctttg 1533393  T

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Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 16880059 - 16880199
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||    
T  16880059 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatct-gggggagagagcagctctccaatccaatatgtgaatgttttacaaa 16880157  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
      ||||||||||  |||||| |||||||||||||||||||||||    
T  16880158 gagttacaagaa--tctagcttatcaagctttacacaagacaaa 16880199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 16884915 - 16885055
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||    
T  16884915 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatct-gggggagagagcagctctccaatccaatatgtgaatgttttacaaa 16885013  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
      ||||||||||  |||||| |||||||||||||||||||||||    
T  16885014 gagttacaagaa--tctagcttatcaagctttacacaagacaaa 16885055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 21639782 - 21639906
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |    
T  21639782 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccactataatg 21639880  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  21639881 aaagtgttacaaagggttacaagaaa 21639906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 18408764 - 18408861
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  18408764 aagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaaa 18408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 18413641 - 18413737
Alignment:
Q  69 aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  18413641 aagattgttgacccagttcagccaatatggcctaatct--ggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 18413737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 21645980 - 21646104
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||| |    
T  21645980 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatct-agggaagagagcagctctccaatccactatgatg 21646078  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||| ||| ||||||||||||    
T  21646079 aaagtgttaaaaagggttacaagaaa 21646104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 21812337 - 21812229
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| | |||| |||||||    
T  21812337 aacaaaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctg-ggggagagagcagctttccaatccaatatgtg-aagtcttacaaa 21812240  T
Q  154 aggttacaaga 164  Q
    ||||| |||||    
T  21812239 aggttccaaga 21812229  T

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Target: chr7; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 29159803 - 29159902
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  29159803 aagattgttgacccagttcggtccaatatgacctaatctagggg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaa 29159901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 21983285 - 21983370
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 154  Q
    |||||||||||||||||| | |||||||| |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

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Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 46516407 - 46516308
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | |||||||| |||||||| |||| |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  46516407 aagattgttgacccagttcggtccaatatgacctaatctagggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 46516309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 49091661 - 49091760
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||||||||||||||| || |||||||| ||||||||||||  |||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||    
T  49091661 aagattgttgacccagtttagtccaatatgacctaatctgggga-agagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaa 49091759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 44848781 - 44848683
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| |  ||||||| ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  44848781 aagattgttgacccagttcggttcaatatgacctaacctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 44848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 55948 - 56046
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||| |||||||||||| | |||||||| ||||||||||||  |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  55948 aagattattgacccagttcggtccaatatgacctaatctgggg--agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 56045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 2647793 - 2647694
Alignment:
Q  69 aagattgttgacccagttcagcc-aatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||| ||| ||| |||||| |||| |||||||| |||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  2647793 aagattgttgacccaattcggcccaatatgacctattctggggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaa 2647695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 33332547 - 33332448
Alignment:
Q  69 aagattgttgacccagttc-agccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    ||||||||||||||||||| | | |||||| ||||||||||||| |||||||||| |||||||||| || || |||||||||||||||| ||||||||||    
T  33332547 aagattgttgacccagttcgatctaatatgacctaatctggggg-agagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaa 33332449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 9190105 - 9190007
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||| |||||||| ||||||||||||||||||||| || || |||||||||||||   |||||||||||    
T  9190105 aagattgttgacccagttcggtccaatatgacctagtctggggg-agagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa 9190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 20284089 - 20284187
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| |||||||||| || || |||||||||||||   |||||||||||    
T  20284089 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagccctccaatccactaagatgaaagtgttacaatgcgttacaagaaa 20284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 2580390 - 2580488
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||| ||| | |||||||| |||| ||||||| |||||||||||||||||||||| || || |||||||||||||   |||||||||||    
T  2580390 aagattgttgacccaattcggtccaatatgacctagtctgggg-gagagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaa 2580488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 2479337 - 2479434
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| |  ||||||| |||||||| ||||  ||||||||||||| |||||| ||||| ||||||||||||||  |||| ||||||    
T  2479337 aagattgttgacccagttcggttcaatatgacctaatctagggg--gagagcagctctcaaatccactatgatgaaagtgttacaaagagttataagaaa 2479434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 47263678 - 47263757
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgtta 149  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||   ||||||||||||||||||| ||||| ||||||||||    
T  47263678 aagattgttgacccagttcggtccaatatgacctaatatggggg---agagcagctctccaatccactatgatgaaagtgtta 47263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 35960816 - 35960901
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 153  Q
    ||||||||||||| ||||| |  ||||||| |||||||||||| ||||||||||| |||||| ||| ||||| ||||||||||||||    
T  35960816 aagattgttgaccgagttcggttcaatatgacctaatctgggg-gagagagcagccctccaaaccactatgatgaaagtgttacaaa 35960901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 9185262 - 9185178
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    ||||||||||||||||||| | |||||||  |||| |||||||| |||||| |||||||||||||| || || |||||||||||||    
T  9185262 aagattgttgacccagttcggtccaatataacctagtctggggg-agagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 21988909 - 21988992
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 154  Q
    |||||||||||||||||| | |||||||| |||||||||| |   ||||||| |||||||||||| | ||| |||||||||||||||    
T  21988909 agattgttgacccagttcggtccaatatgacctaatctggag---gagagcaactctccaatccactttgatgaaagtgttacaaaa 21988992  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 28617319 - 28617258
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatcca 133  Q
    |||||| ||||||||| | |||||||| |||| |||||||| |||||||||||||||||||||    
T  28617319 attgtttacccagttcggtccaatatgacctactctggggg-agagagcagctctccaatcca 28617258  T

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Target: scaffold0464 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 349 - 494
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  349 aacaaaacaccgagcaagattgttgacccagttcagccaatatggcctaatct-gggggagagagcagctctccaatccaatatgtg-aagtgttacaaa 446  T
Q  154 aggttacaagaaactctagc-tatcaagctttacacaag-acaaacccta 201  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||||    
T  447 aggttacaag--actctagcttatcaagctttacacatgaacaaacccta 494  T

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Target: scaffold0197 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 14408 - 14267
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaa 153  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  14408 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctggggg-agagagcagctctccaatccaatatgtgaatgtgttacaaa 14310  T
Q  154 ag-gttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    || ||||||||||  |||||| |||||||||||||||||||||||    
T  14309 agagttacaagaa--tctagcttatcaagctttacacaagacaaa 14267  T

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Target: scaffold0197; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 19260 - 19123
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||||| ||  |||||||||||| |    
T  19260 aaacaccgagcaagattgttgacccagttcagccattgtggcctaatctg-ggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagag 19162  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  19161 ttacaagaa--tctagcttatcaagctttacacaagacaaa 19123  T

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Target: scaffold0259 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 2346 - 2209
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||| |    
T  2346 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctg-ggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagag 2248  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  2247 ttacaagaa--tctagcttatcaagctttacacaagacaaa 2209  T

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Target: scaffold0188 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 18075 - 17951
Alignment:
Q  43 caagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-g 140  Q
    ||||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |    
T  18075 caagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccactatgatg 17977  T
Q  141 aaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||| ||||||||||||    
T  17976 aaagtgttacaaagggttacaagaaa 17951  T

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Target: scaffold0188; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 24167 - 24044
Alignment:
Q  44 aagaaaggaataacaaa-acaccgagaagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatga-ga 141  Q
    |||||||||| |||||| ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||    
T  24167 aagaaaggaagaacaaacacaccaaaaagattgttgacccagttcagccaatatggcctaatctg-ggggagagagcagctctccaatccactatgatga 24069  T
Q  142 aagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||| ||||||||||||    
T  24068 aagtgttacaaagggttacaagaaa 24044  T

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Target: scaffold0028 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 149051 - 148914
Alignment:
Q  59 aaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-g 156  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||| |    
T  149051 aaacaccgagcaagattgttgacccagttcagccaatgtggcctaatctg-ggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagag 148953  T
Q  157 ttacaagaaactctagc-tatcaagctttacacaagacaaa 196  Q
    |||||||||  |||||| |||||||||||||||||||||||    
T  148952 ttacaagaa--tctagcttatcaagctttacacaagacaaa 148914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 182063 - 181980
Alignment:
Q  55 aacaaaacaccgag-aagattgttgacccagttcagccaatatggcctaatctggggggagagagcagctctccaatccaatatg 138  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  182063 aacaaaacaccaagcaagattgttgacccagttcagccaatgtggcctaatctg-ggggagagagcagctctccaatccaatatg 181980  T

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Target: scaffold0140 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 8516 - 8418
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  8516 aagattgttgacccagttcggtccaatatgacctaatctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 8418  T

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Target: scaffold0036 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 85684 - 85781
Alignment:
Q  70 agattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    |||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||  |||| ||||||||||||||  |||||||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggg-gagagagcggctctccaatccaccatgatgaaagtgttacaaagagttacaagaaa 85781  T

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Target: scaffold0087 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 44058 - 43960
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | ||||||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  44058 aagattgttgacccagttcggtccaatatgatctattctggggg-agagagcagctctccaatccactatgatgaaagtgttacaaagagttacaagaaa 43960  T

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Target: scaffold0087; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 36929 - 36831
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||| | |||||||| |||||||| |||  |||||||||||| |||| ||| ||||| ||||||||||||||  |||||||||||    
T  36929 aagattgttgacccagttcggtccaatatgacctaatctaggga-agagagcagctcgccaacccactatgatgaaagtgttacaaagagttacaagaaa 36831  T

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Target: scaffold0148 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 10729 - 10828
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaa 165  Q
    |||||| |||||||||||| | |||||||| |||||| ||||| |||||||||||||||||||||| || || |||||||||||||||| ||||||||||    
T  10729 aagattattgacccagttcggtccaatatgacctaatttgggg-gagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaa 10827  T

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Target: scaffold0006 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 5683 - 5770
Alignment:
Q  69 aagattgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||| || ||||||| ||||| ||||||||||||||||    
T  5683 aagattgttgacccagttcggtccaatatgacctaatctgggg-gagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 2492 - 2579
Alignment:
Q  69 aagattgttgacccagttc-agccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 155  Q
    |||||||||||||||||||   |||||||| |||||||| |||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  2492 aagattgttgacccagttcgctccaatatgacctaatct-gggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 133377 - 133279
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagaaa 166  Q
    ||||||||||||||||||  |  ||||||| |||||| |||||| ||||||||||||||||||||| ||||| |||| |||||||||  |||||||||||    
T  133377 aagattgttgacccagttaggttcaatatgacctaatatggggg-agagagcagctctccaatccactatgatgaaaatgttacaaagagttacaagaaa 133279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 356 - 300
Alignment:
Q  45 agaaaggaataacaaaacaccgagaagattgttgacccagttcagccaatatggcct 101  Q
    |||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  356 agaaagaaagaacaaaacaccaagaagattgttgacctagttcagccaatatggcct 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 45253 - 45337
Alignment:
Q  69 aagattgttgacccagttcagc-caatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaa 152  Q
    |||||||||||| |||||| |  ||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||| |||||||    
T  45253 aagattgttgactcagttcggttcaatatgacctaatctgggg-gagagagcagctctccaatccactatgatgaaagcgttacaa 45337  T

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Target: scaffold0176 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 17266 - 17362
Alignment:
Q  72 attgttgacccagttcag-ccaatatggcctaatctggggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagaaa 166  Q
    |||||||||||||||| |  ||||||| |||||| | |||  |||||||| | |||||||||| ||||| |||||||||||||||| |||||||||||    
T  17266 attgttgacccagttcggttcaatatgacctaatat-gggaaagagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaaa 17362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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