View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17778_low_11 (Length: 278)
Name: NF17778_low_11
Description: NF17778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17778_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 1784692 - 1784957
Alignment:
| Q |
1 |
agaatcaaaagggactgatttgttcatgtttcaatttggacggtctaatctaaacctcttgaaatatttttatatgcatatgaatactctattaacaaac |
100 |
Q |
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| T |
1784692 |
agaatcaaaagggactgatttgttcatgtttcaatttggacggtctaacctaaacctcttgaaatatttttatatgcatatgaatactctattaacaaac |
1784791 |
T |
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| Q |
101 |
atgaaattaaataacaaatattctattaactctaaaaaacaccatgttggaattcaagtgtgagtgcctaatttcgcattaattataacttagctaaatg |
200 |
Q |
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| T |
1784792 |
atgaaattaaataacaaatattctattaactctaaaaaa-accatgttggaattcaagtgcgagtgcctagtttcgcattaattataacttagttaaatg |
1784890 |
T |
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| Q |
201 |
aaaaatatataagagacttgacgcatatatcttatatcataagatttttggtgtggagatatgatgt |
267 |
Q |
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| T |
1784891 |
aaagttatataagagacttgacacatatatctatcatcttaagattttgggtgtggagatgtgatgt |
1784957 |
T |
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