View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1777_high_28 (Length: 288)
Name: NF1777_high_28
Description: NF1777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1777_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 34220163 - 34220353
Alignment:
| Q |
19 |
ttgagttccttcatattagaaattttgatcaaatctatgaaacatggatgcttgtaaaactatgaaccacgtgtacatactgttatgaatacttgtccaa |
118 |
Q |
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| T |
34220163 |
ttgagttccttcatattagaaattttgatcaaatctatgaaacatggatgcttgtaaaactatgaaccacgtgtacatactgttatcaatacttgtccaa |
34220262 |
T |
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| Q |
119 |
tttcctcattatttcatttttgagtgaaatttatagttttctcaaatttgagtttctttattattctaaccagacactattcctgactagc |
209 |
Q |
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| T |
34220263 |
tttcctcattatttcatttttgagtgaaatttatagttttctcaagtttgagtttctttattattctaaccagacactatttctgactagc |
34220353 |
T |
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