View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1777_high_36 (Length: 242)
Name: NF1777_high_36
Description: NF1777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1777_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6258609 - 6258384
Alignment:
| Q |
1 |
aaaataaatttatggagcaaaataccttacgacccacaaatggacgtggaaagacaagatcctcatacacacaattttcagagataagatattgtacaga |
100 |
Q |
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| T |
6258609 |
aaaataaatttatggagcaaaataccttacgacccacaaatggacgtggaaagacaagatcctcatacacacaattttcagagataagatattgtacaga |
6258510 |
T |
|
| Q |
101 |
atcaacatcatgtgcattgattccctcatagaaatttctcacaacttttgaagctgaatctacaaccttgttatcatcaaagtgtgtggtagttgttgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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|
| T |
6258509 |
atcaacatcatgtgcattgattccctcatagaaatttctcacaacttttgaagctgaatctacaaccttgttatcatcaaagtgtgtggtagttgtagta |
6258410 |
T |
|
| Q |
201 |
attgaattattttcaccactgttatt |
226 |
Q |
| |
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|||||||||||||||||| ||||||| |
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|
| T |
6258409 |
attgaattattttcaccattgttatt |
6258384 |
T |
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