View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17780_low_1 (Length: 261)
Name: NF17780_low_1
Description: NF17780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17780_low_1 |
 | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0485 (1 HSPs) |
| | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0222 (1 HSPs) |
| | |
|
| [»] scaffold0566 (1 HSPs) |
| | |
|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0113 (1 HSPs) |
| | |
|
| [»] scaffold1184 (1 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 9581704 - 9581453
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581704 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatc |
9581605 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9581604 |
ctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctct |
9581505 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581504 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9581453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 9729556 - 9729305
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9729556 |
tacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaataatc |
9729457 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9729456 |
ctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctct |
9729357 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9729356 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9729305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 16327179 - 16327430
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
16327179 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaataatt |
16327278 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
16327279 |
ctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcctct |
16327378 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16327379 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
16327430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 540171 - 540416
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| |
|
|
| T |
540171 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaatgatt |
540270 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
540271 |
ctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcctct |
540364 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
540365 |
tgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
540416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 4311525 - 4311279
Alignment:
| Q |
5 |
tgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctcc |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4311525 |
tgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaataattctcc |
4311426 |
T |
|
| Q |
105 |
attcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctcttgat |
204 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||| || ||||||||||||||||||||||||| | ||||||| || |||||||||||||||| |
|
|
| T |
4311425 |
attcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcctcttgat |
4311326 |
T |
|
| Q |
205 |
cccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
| |||||||||||||| ||| |||| || ||| |||||| |||||||| |
|
|
| T |
4311325 |
ctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgat |
4311279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 8783505 - 8783752
Alignment:
| Q |
5 |
tgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctcc |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| | |||||||||||| |
|
|
| T |
8783505 |
tgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaataattctcc |
8783604 |
T |
|
| Q |
105 |
attcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctcttgat |
204 |
Q |
| |
|
|||||||| ||||||||||||| || |||||||| ||||||| | ||||||||||||||||||||||| | ||||||| || ||||||||| |||||| |
|
|
| T |
8783605 |
tttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatccccttgat |
8783704 |
T |
|
| Q |
205 |
cccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|| ||||||||||||||||| |||| || |||||||||| |||||||| |
|
|
| T |
8783705 |
ccattgattcacactcaccccaaacttcctagcaataaaggtgatgat |
8783752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 14223144 - 14223313
Alignment:
| Q |
83 |
caattagttctaataattctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataat |
182 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
14223144 |
caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat |
14223243 |
T |
|
| Q |
183 |
aattttcctctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
| || |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
14223244 |
agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14223313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23513871 - 23513729
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| || | | | |
|
|
| T |
23513871 |
tacctgtgggttagtgccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattgact |
23513772 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| |||||| |||||||||||| | || ||||| |||||| |
|
|
| T |
23513771 |
ctccactcatataggtaattgtgagaagggccatggattctaa |
23513729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4462119 - 4462244
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||| ||| || ||||||||||||||||||||||| || |||||| ||| |
|
|
| T |
4462119 |
taccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatgatt |
4462218 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagt |
126 |
Q |
| |
|
|| | |||||||||| ||||||||| |
|
|
| T |
4462219 |
ttctaatcatattggtcattgtgagt |
4462244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5395942 - 5395862
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa |
81 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
5395942 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaa |
5395862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13741223 - 13741099
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||| ||||| |||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| || | | | |
|
|
| T |
13741223 |
tacctgtggattagtgccaacataaacatagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattgact |
13741124 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
13741123 |
ctccactcatattggtaattgtgag |
13741099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10439750 - 10439892
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| ||||||| | | |||||||| || |||||||||||||||||||| ||||| || | | | |
|
|
| T |
10439750 |
tacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattgact |
10439849 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| ||||||||||||||||||| | || ||||||||||| |
|
|
| T |
10439850 |
ctccactcatattggtaattgtgagaagggctatgggttctaa |
10439892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 12565805 - 12565684
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| ||||| |||||||||| ||||||||| || ||||||||| ||||||||| |||||| || | | | |
|
|
| T |
12565805 |
taccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattgact |
12565706 |
T |
|
| Q |
101 |
ctccattcatattggtaattgt |
122 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
12565705 |
ctccactcatattggtaattgt |
12565684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 42711187 - 42711434
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42711187 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
42711286 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
42711287 |
ctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctct |
42711386 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtga |
248 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42711387 |
tgatcctttgattcacactcaccctaaacctcttagcaataaaagtga |
42711434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 14687184 - 14687435
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
14687184 |
tacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaataatt |
14687283 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
14687284 |
ctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcctct |
14687383 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
14687384 |
tgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14687435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 15349256 - 15349501
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
15349256 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgatt |
15349355 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
15349356 |
ctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcctct |
15349449 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
15349450 |
tgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
15349501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45240269 - 45240394
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagttctaataat |
99 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| | |||||| |||||||||||||| ||| |||| || | | |
|
|
| T |
45240269 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattgac |
45240368 |
T |
|
| Q |
100 |
tctccattcatattggtaattgtgag |
125 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
45240369 |
tctccactcatattggtaattgtgag |
45240394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 11498025 - 11498233
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| | |||||||||||||||||||| |||||| | | | | |
|
|
| T |
11498025 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattgact |
11498124 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||| |||||||||||||||| || | ||||||| |||||| ||| ||| |||||||| || | ||||| | |||| || ||| |||| ||||| | |
|
|
| T |
11498125 |
ctccactcatattggtaattgttagaagggtcatgaattctaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcctat |
11498224 |
T |
|
| Q |
201 |
tgatccctt |
209 |
Q |
| |
|
| ||||||| |
|
|
| T |
11498225 |
ttatccctt |
11498233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18290822 - 18290742
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa |
81 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
18290822 |
tacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaa |
18290742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
| Q |
16 |
accaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctccattcatattgg |
115 |
Q |
| |
|
||||||||||| ||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||||||| |||||| ||| | | | |||| ||||||||| |
|
|
| T |
11918125 |
accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg |
11918223 |
T |
|
| Q |
116 |
taattgtgag |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
11918224 |
taattgtgag |
11918233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10629549 - 10629410
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||| ||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
10629549 |
tacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
10629453 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| ||||||||| ||||||||| | || ||||| |||||| |
|
|
| T |
10629452 |
ctccactcatattgggaattgtgagaagggccatggattctaa |
10629410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 23712119 - 23712370
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23712119 |
tacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaataatc |
23712218 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
23712219 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcctct |
23712318 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
23712319 |
tgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgat |
23712370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20446257 - 20446381
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
20446257 |
tacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
20446356 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
20446357 |
ctccactcatattggtaattgtgag |
20446381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21282322 - 21282465
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagttctaataat |
99 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| | |||||| |||||||||||||| ||| |||| || | | |
|
|
| T |
21282322 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattgac |
21282421 |
T |
|
| Q |
100 |
tctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
|||||| ||||||||||||||||||| | ||| |||| |||||| |
|
|
| T |
21282422 |
tctccactcatattggtaattgtgagaagggttatggattctaa |
21282465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 18487475 - 18487596
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||| |||||| |||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
18487475 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattgact |
18487574 |
T |
|
| Q |
101 |
ctccattcatattggtaattgt |
122 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
18487575 |
ctccactcatattggtaattgt |
18487596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 23602052 - 23602191
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
23602052 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
23602148 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
| ||| ||||||||| ||||||||| | || ||||| |||||| |
|
|
| T |
23602149 |
cgccactcatattgggaattgtgagaaaggccatggattctaa |
23602191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24939332 - 24939193
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| || ||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
24939332 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
24939236 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
| ||| ||||||||| ||||||||| | || ||||| |||||| |
|
|
| T |
24939235 |
cgccactcatattgggaattgtgagaagggccatggattctaa |
24939193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 24218627 - 24218516
Alignment:
| Q |
5 |
tgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctcc |
104 |
Q |
| |
|
||||||||||| ||||||||| | ||||| |||| ||||||||||||||| || |||||||||||||||||||| |||||| || | | ||||| |
|
|
| T |
24218627 |
tgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattgactctcc |
24218531 |
T |
|
| Q |
105 |
attcatattggtaat |
119 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
24218530 |
actcatattggtaat |
24218516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 12777916 - 12778170
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12777916 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
12778015 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12778016 |
ctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcctct |
12778115 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgatgtc |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12778116 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtc |
12778170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 15024501 - 15024254
Alignment:
| Q |
5 |
tgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctcc |
104 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||| |||| ||||||||| |
|
|
| T |
15024501 |
tgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctattaattctcc |
15024402 |
T |
|
| Q |
105 |
attcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctcttgat |
204 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| | |||||||||||||||| |
|
|
| T |
15024401 |
attcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcctcttgat |
15024302 |
T |
|
| Q |
205 |
cccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||| |||| | ||||||||||||||||||| |
|
|
| T |
15024301 |
cccttgattcacactcaccccaaactttctagcaataaaagtgatgat |
15024254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 6813664 - 6813419
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
6813664 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgatt |
6813565 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||| || ||||||| |||||||| |||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
6813564 |
ctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcctct |
6813471 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||| ||||||| |||| |||||||||||||||||||||| |
|
|
| T |
6813470 |
tgatcccttgattcatactcacctcaaacttcttagcaataaaagtgatgat |
6813419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20562151 - 20562027
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| || |||||||||||||||||||| ||||||| || | | | |
|
|
| T |
20562151 |
tacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattgact |
20562052 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
20562051 |
ctccactcatattggtaattgtgag |
20562027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20564459 - 20564335
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| || |||||||||||||||||||| ||||||| || | | | |
|
|
| T |
20564459 |
tacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattgact |
20564360 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
20564359 |
ctccactcatattggtaattgtgag |
20564335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 20559840 - 20559719
Alignment:
| Q |
4 |
ctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctc |
103 |
Q |
| |
|
|||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| || |||||||||||||||||||| ||||||| || | | |||| |
|
|
| T |
20559840 |
ctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattgactctc |
20559741 |
T |
|
| Q |
104 |
cattcatattggtaattgtgag |
125 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
20559740 |
cactcatattggtaattgtgag |
20559719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13090219 - 13090358
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
13090219 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
13090315 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
| ||| ||||||||| ||||||||| | || ||||| |||||| |
|
|
| T |
13090316 |
caccactcatattgggaattgtgagaagggccatggattctaa |
13090358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 9362369 - 9362508
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| |||||||||||| | |||||||||||||||||||| |||||| || | | | |
|
|
| T |
9362369 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattgact |
9362465 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| ||||||||| |||||||| | || ||||| |||||| |
|
|
| T |
9362466 |
ctccactcatattggggattgtgagaagggccatggattctaa |
9362508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 13096512 - 13096373
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| ||||||||| | ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
13096512 |
tacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattgact |
13096416 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| |||| |||| ||||||||| | || ||||| |||||| |
|
|
| T |
13096415 |
ctccactcatgttgggaattgtgagaagggccatggattctaa |
13096373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3246925 - 3246968
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacct |
44 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
3246925 |
tacctgtgggttagtacaaaaataaaacaaattttccaccacct |
3246968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 51965 - 52216
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
51965 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaataatt |
52064 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
52065 |
ctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcctct |
52164 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52165 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
52216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 29563 - 29312
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |
|
|
| T |
29563 |
tacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatgatt |
29464 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
29463 |
ctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcctct |
29364 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
29363 |
tgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
29312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 20001100 - 20000852
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
20001100 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgatt |
20001001 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
20001000 |
ctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcctct |
20000901 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
20000900 |
tgatcccttgattcacactcaccccaaa---cttagcaataaaagtgatgat |
20000852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20040481 - 20040697
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | | ||||| |||||||| ||||||||||| || |||||||||||||||||||| ||||||| || | | | |
|
|
| T |
20040481 |
tacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattgact |
20040580 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||| ||||||||||||||||||| | || |||| |||||| ||| ||| |||||||| || | ||||| | |||| || ||| |||| ||||| | |
|
|
| T |
20040581 |
ctccactcatattggtaattgtgagaagggccatgaattctaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcctat |
20040680 |
T |
|
| Q |
201 |
tgatcccttgattcaca |
217 |
Q |
| |
|
| ||||||| ||||||| |
|
|
| T |
20040681 |
ttatccctttattcaca |
20040697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21855188 - 21855327
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||| ||||||| |||||||||| | ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
21855188 |
tacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
21855284 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| ||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
21855285 |
ctccactcatattggtaattgtgagaagggttatgggttctaa |
21855327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17619543 - 17619422
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
17619543 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
17619447 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| ||||||||| ||||||||| |
|
|
| T |
17619446 |
ctccactcatattggaaattgtgag |
17619422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 11316 - 11568
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaatttt-ccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataat |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11316 |
tacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaataat |
11415 |
T |
|
| Q |
100 |
tctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctc |
199 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||| || ||||||||||| |
|
|
| T |
11416 |
tctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatcctc |
11515 |
T |
|
| Q |
200 |
ttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||||||||||||| |||| | |||||||||| |||||||| |
|
|
| T |
11516 |
ttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgat |
11568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 27045669 - 27045424
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
27045669 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgatt |
27045570 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
27045569 |
ctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcctct |
27045476 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
27045475 |
tgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
27045424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 22626469 - 22626562
Alignment:
| Q |
32 |
ttttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||| || | | |||||| ||||||||||||||||||| |
|
|
| T |
22626469 |
ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgag |
22626562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21785855 - 21785932
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa |
81 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| |||||||||||| || ||||||||||||| |||||| |
|
|
| T |
21785855 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaa |
21785932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 22062923 - 22063168
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
22062923 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgatt |
22063022 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||||| ||| |||||||||||||||| ||||||| || ||||||| |||||||| |||||| |||||| ||||||| || || |||||||||| |
|
|
| T |
22063023 |
ctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcctct |
22063116 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
22063117 |
tgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
22063168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 19586986 - 19587222
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
19586986 |
tacctgtgggttaataccaacataaatcaaattttccaccacctccagatta---------------ggtagaataatcaaacaattagctctaataatt |
19587070 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
|||| || |||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||| | ||||||| || ||||||||||| |
|
|
| T |
19587071 |
ctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcctctctatcctct |
19587170 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||||||||||||| |||||||| |||| || |||||||||| |||||||| |
|
|
| T |
19587171 |
tgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgat |
19587222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 23519163 - 23519414
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||| ||| | | | |
|
|
| T |
23519163 |
tacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctatttact |
23519262 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||| |||||||||| ||||||| | ||||||||||| |||||||||||| ||| |||| |||| ||||| | ||||||| || |||| ||||| | |
|
|
| T |
23519263 |
ttccgcacatattggtagttgtgagaagggtcatgggttataaggaaagacatggtattgagggtatctaagtctagataatagttcccctcaatcctat |
23519362 |
T |
|
| Q |
201 |
tgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||| ||| | ||| | |||| |||||| || ||||||| || |||||||| |
|
|
| T |
23519363 |
tgacccccttgctcatattcactctaaacttcctagcaatgaaggtgatgat |
23519414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 18188981 - 18189123
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||| || | | | |
|
|
| T |
18188981 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattgact |
18189080 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||| ||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
18189081 |
ctccactcatattggtaattgtgagaagggtcatggattctaa |
18189123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17818318 - 17818194
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
17818318 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
17818219 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgag |
125 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
17818218 |
ctccactcatattggtaattgtgag |
17818194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18852819 - 18852742
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa |
81 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
18852819 |
tacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatcaa |
18852742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29685335 - 29685293
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacc |
43 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29685335 |
tacctgtgggttagtactaacataaagcaaattttccaccacc |
29685293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 24501132 - 24500924
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| || | | | |
|
|
| T |
24501132 |
tacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattgact |
24501033 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctct |
200 |
Q |
| |
|
||||| | ||||||||||||||||| | || ||||| ||||||| ||| ||| |||||||| || | ||||| | |||| || ||| |||| ||||| | |
|
|
| T |
24501032 |
ctccactaatattggtaattgtgagaagggccatggattctaagaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcctat |
24500933 |
T |
|
| Q |
201 |
tgatccctt |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
24500932 |
tgatccctt |
24500924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 25339522 - 25339769
Alignment:
| Q |
5 |
tgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctcc |
104 |
Q |
| |
|
|||| |||||| ||||||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| ||| | | ||| |
|
|
| T |
25339522 |
tgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattgaccttcc |
25339621 |
T |
|
| Q |
105 |
attcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcctctatcctcttgat |
204 |
Q |
| |
|
| |||||||||||||||||||| || |||| |||||||| || |||| ||| ||||| |||| ||||| | | || || |||||||||| ||||| |
|
|
| T |
25339622 |
actcatattggtaattgtgagttgggccatgagttctaagaaaggacatagtggtgagggtatctaagtctaaactattgttcccctctatcctattgat |
25339721 |
T |
|
| Q |
205 |
cccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
252 |
Q |
| |
|
||||| | ||||||| || | |||| || ||||||| || |||||||| |
|
|
| T |
25339722 |
ccctttactcacacttactccaaacttcctagcaatgaaggtgatgat |
25339769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 11741 - 11867
Alignment:
| Q |
17 |
ccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctccattcatattggt |
116 |
Q |
| |
|
|||||||||| ||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| || | | |||||| |||||||||| |
|
|
| T |
11741 |
ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt |
11840 |
T |
|
| Q |
117 |
aattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
||||||||| | |||||||| |||||| |
|
|
| T |
11841 |
aattgtgagaagggtcatggattctaa |
11867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 18630 - 18509
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
18630 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
18531 |
T |
|
| Q |
101 |
ctccattcatattggtaattgt |
122 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
18530 |
ctccactcatattggtaattgt |
18509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0566 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0566
Description:
Target: scaffold0566; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1409 - 1275
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||| || |||||||||||||||||||| |||||| | | | | |
|
|
| T |
1409 |
tacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattgact |
1310 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatg |
135 |
Q |
| |
|
||||| |||||||||||||||| || | ||||||| |
|
|
| T |
1309 |
ctccactcatattggtaattgttagaagggtcatg |
1275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 17138 - 17029
Alignment:
| Q |
32 |
ttttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataattctccattcatattggtaattgtgagtatggt |
131 |
Q |
| |
|
||||| |||||||| | ||||||||| ||||||||||||||||||||||| ||||||| || | | |||||| ||||||||||||||||||| | ||| |
|
|
| T |
17138 |
ttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggt |
17039 |
T |
|
| Q |
132 |
catgggttct |
141 |
Q |
| |
|
||||| |||| |
|
|
| T |
17038 |
catggattct |
17029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 38045 - 38184
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaataatt |
100 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||| | ||||||||| || |||||||||||||||||||| |||||| || | | | |
|
|
| T |
38045 |
tacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagcattattgact |
38141 |
T |
|
| Q |
101 |
ctccattcatattggtaattgtgagtatggtcatgggttctaa |
143 |
Q |
| |
|
| ||| ||||||||| ||||||||| | || ||||| |||||| |
|
|
| T |
38142 |
cgccactcatattggaaattgtgagaagggccatggattctaa |
38184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1184 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1184
Description:
Target: scaffold1184; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 537 - 571
Alignment:
| Q |
6 |
gtgggttagtaccaacataaagcaaattttccacc |
40 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
537 |
gtgggttagtaccaacataaagcaaattttccacc |
571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12856 - 12930
Alignment:
| Q |
1 |
tacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataat |
78 |
Q |
| |
|
||||||||||||||| |||||||||| | ||||| ||||||||| |||||||||| || | |||||||||||||| |
|
|
| T |
12856 |
tacctgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataat |
12930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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