View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17781_high_17 (Length: 239)

Name: NF17781_high_17
Description: NF17781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17781_high_17
NF17781_high_17
[»] chr5 (21 HSPs)
chr5 (17-239)||(41565928-41566149)
chr5 (185-235)||(19535938-19535988)
chr5 (186-238)||(21910974-21911026)
chr5 (185-235)||(23412644-23412694)
chr5 (186-235)||(12352474-12352523)
chr5 (186-235)||(26784790-26784839)
chr5 (186-235)||(33023098-33023147)
chr5 (186-238)||(21198691-21198743)
chr5 (185-235)||(89090-89140)
chr5 (185-235)||(5430311-5430361)
chr5 (186-235)||(4887456-4887505)
chr5 (186-235)||(6512103-6512152)
chr5 (186-235)||(7745301-7745350)
chr5 (186-235)||(17815417-17815466)
chr5 (184-235)||(42244147-42244197)
chr5 (185-235)||(20551312-20551362)
chr5 (184-238)||(21071893-21071947)
chr5 (185-235)||(21099345-21099394)
chr5 (186-235)||(6499672-6499721)
chr5 (186-238)||(642348-642400)
chr5 (186-238)||(9398399-9398451)
[»] chr7 (36 HSPs)
chr7 (185-238)||(13649146-13649199)
chr7 (186-238)||(13303267-13303319)
chr7 (185-235)||(21695820-21695870)
chr7 (185-235)||(22577678-22577728)
chr7 (185-235)||(28409484-28409534)
chr7 (186-235)||(13692790-13692839)
chr7 (186-235)||(13730369-13730418)
chr7 (185-235)||(13137582-13137632)
chr7 (185-235)||(39284269-39284319)
chr7 (186-235)||(2500475-2500524)
chr7 (186-235)||(10882833-10882882)
chr7 (186-235)||(24788502-24788551)
chr7 (186-235)||(30026341-30026390)
chr7 (186-235)||(44467500-44467549)
chr7 (186-238)||(15469914-15469966)
chr7 (185-235)||(9070023-9070073)
chr7 (185-235)||(13260282-13260332)
chr7 (185-235)||(23279698-23279748)
chr7 (186-235)||(2913280-2913329)
chr7 (186-235)||(5000513-5000562)
chr7 (186-235)||(11319854-11319903)
chr7 (186-235)||(13880554-13880603)
chr7 (186-235)||(14193529-14193578)
chr7 (186-235)||(15088939-15088988)
chr7 (186-235)||(23390688-23390737)
chr7 (188-235)||(4494923-4494970)
chr7 (188-235)||(13031748-13031795)
chr7 (184-235)||(16111539-16111590)
chr7 (185-235)||(2265189-2265239)
chr7 (185-235)||(12173982-12174032)
chr7 (185-235)||(15700948-15700998)
chr7 (185-235)||(16316234-16316284)
chr7 (186-235)||(9097899-9097947)
chr7 (186-235)||(33606136-33606185)
chr7 (186-235)||(35952329-35952378)
chr7 (184-235)||(33691382-33691434)
[»] scaffold0146 (1 HSPs)
scaffold0146 (186-238)||(15536-15588)
[»] chr3 (37 HSPs)
chr3 (186-238)||(17238611-17238663)
chr3 (186-235)||(21233266-21233315)
chr3 (184-238)||(25397917-25397971)
chr3 (186-235)||(12723910-12723959)
chr3 (186-235)||(38177346-38177395)
chr3 (186-235)||(49553145-49553194)
chr3 (184-235)||(24775154-24775205)
chr3 (185-235)||(3522717-3522767)
chr3 (185-235)||(18142509-18142559)
chr3 (185-235)||(22141197-22141247)
chr3 (185-235)||(52920858-52920908)
chr3 (186-235)||(13824485-13824534)
chr3 (186-235)||(14392663-14392712)
chr3 (186-235)||(14955911-14955960)
chr3 (186-235)||(15903653-15903702)
chr3 (186-235)||(16032933-16032981)
chr3 (186-235)||(20646607-20646656)
chr3 (186-235)||(20725551-20725599)
chr3 (186-235)||(22803758-22803807)
chr3 (186-235)||(33583715-33583764)
chr3 (186-235)||(33591204-33591253)
chr3 (186-235)||(33598335-33598384)
chr3 (183-238)||(6091182-6091237)
chr3 (184-227)||(14969776-14969819)
chr3 (188-235)||(18118323-18118370)
chr3 (188-235)||(53056387-53056434)
chr3 (186-235)||(9510562-9510609)
chr3 (186-235)||(9518537-9518584)
chr3 (186-235)||(12968799-12968846)
chr3 (185-235)||(16658299-16658348)
chr3 (186-235)||(19197519-19197566)
chr3 (185-235)||(19249064-19249113)
chr3 (185-235)||(28582560-28582610)
chr3 (185-235)||(49990725-49990775)
chr3 (185-238)||(12962757-12962810)
chr3 (186-235)||(46349485-46349534)
chr3 (186-235)||(46828523-46828572)
[»] chr2 (35 HSPs)
chr2 (180-235)||(25829552-25829607)
chr2 (184-235)||(38781828-38781879)
chr2 (184-235)||(6573739-6573790)
chr2 (185-235)||(18376546-18376596)
chr2 (185-235)||(22454592-22454642)
chr2 (186-235)||(9014971-9015020)
chr2 (186-235)||(10009371-10009420)
chr2 (186-235)||(38631402-38631451)
chr2 (186-235)||(40782919-40782968)
chr2 (186-238)||(31800485-31800537)
chr2 (184-235)||(23183982-23184033)
chr2 (184-235)||(23595239-23595290)
chr2 (185-235)||(22318060-22318110)
chr2 (185-235)||(28140236-28140286)
chr2 (185-235)||(28711315-28711365)
chr2 (186-235)||(17966752-17966801)
chr2 (186-235)||(21536852-21536901)
chr2 (185-233)||(24377519-24377567)
chr2 (186-238)||(24964134-24964186)
chr2 (184-235)||(20151652-20151702)
chr2 (186-235)||(19115578-19115625)
chr2 (185-235)||(22272582-22272631)
chr2 (185-235)||(24850268-24850318)
chr2 (185-235)||(34321504-34321554)
chr2 (185-235)||(41121351-41121400)
chr2 (184-238)||(45086736-45086790)
chr2 (186-235)||(19540846-19540895)
chr2 (186-235)||(22260853-22260902)
chr2 (186-235)||(22802922-22802971)
chr2 (186-235)||(24576496-24576545)
chr2 (186-235)||(25189801-25189850)
chr2 (186-235)||(28700815-28700864)
chr2 (186-238)||(13963613-13963665)
chr2 (184-235)||(24302549-24302598)
chr2 (186-218)||(26618705-26618737)
[»] chr8 (31 HSPs)
chr8 (185-235)||(18685067-18685117)
chr8 (185-235)||(18730632-18730682)
chr8 (185-238)||(22745913-22745966)
chr8 (186-235)||(23263259-23263308)
chr8 (185-235)||(18120779-18120829)
chr8 (183-235)||(24551743-24551795)
chr8 (184-235)||(29693763-29693814)
chr8 (184-235)||(39696631-39696682)
chr8 (185-235)||(15335697-15335747)
chr8 (185-235)||(15424762-15424812)
chr8 (185-235)||(15516066-15516116)
chr8 (185-235)||(16680961-16681011)
chr8 (185-235)||(20382051-20382101)
chr8 (185-235)||(23184897-23184947)
chr8 (185-235)||(24646783-24646833)
chr8 (185-235)||(24832709-24832759)
chr8 (186-235)||(19156627-19156676)
chr8 (186-235)||(20255225-20255274)
chr8 (186-235)||(43645234-43645282)
chr8 (195-235)||(17702172-17702212)
chr8 (186-238)||(19956004-19956055)
chr8 (188-235)||(18320849-18320896)
chr8 (188-235)||(45538113-45538160)
chr8 (184-230)||(17441477-17441523)
chr8 (185-235)||(21933345-21933395)
chr8 (185-218)||(16189462-16189495)
chr8 (186-235)||(17267917-17267966)
chr8 (186-235)||(19707954-19708002)
chr8 (186-235)||(30421097-30421146)
chr8 (188-235)||(602395-602440)
chr8 (184-235)||(30314272-30314324)
[»] chr6 (29 HSPs)
chr6 (185-235)||(34451329-34451379)
chr6 (184-235)||(19689170-19689221)
chr6 (184-235)||(26971854-26971905)
chr6 (185-235)||(24117282-24117332)
chr6 (186-235)||(14100119-14100168)
chr6 (186-235)||(19086604-19086653)
chr6 (186-238)||(16528974-16529026)
chr6 (179-231)||(32544718-32544770)
chr6 (184-235)||(19624416-19624467)
chr6 (185-235)||(13602608-13602658)
chr6 (185-235)||(26944005-26944054)
chr6 (185-235)||(29918457-29918507)
chr6 (186-235)||(7618057-7618106)
chr6 (186-235)||(9718297-9718346)
chr6 (186-235)||(15955141-15955190)
chr6 (186-235)||(17381884-17381933)
chr6 (195-235)||(20112369-20112409)
chr6 (195-238)||(139023-139066)
chr6 (195-238)||(147044-147087)
chr6 (185-235)||(16877669-16877719)
chr6 (185-235)||(18378708-18378758)
chr6 (186-235)||(19626279-19626326)
chr6 (185-235)||(21625554-21625603)
chr6 (186-235)||(13435986-13436035)
chr6 (185-218)||(17928272-17928305)
chr6 (186-235)||(19473259-19473307)
chr6 (186-218)||(7812472-7812504)
chr6 (195-235)||(15987648-15987688)
chr6 (190-238)||(24508005-24508053)
[»] scaffold0018 (2 HSPs)
scaffold0018 (186-235)||(52959-53008)
scaffold0018 (186-235)||(56911-56960)
[»] scaffold0004 (4 HSPs)
scaffold0004 (186-235)||(377183-377232)
scaffold0004 (185-235)||(30479-30529)
scaffold0004 (185-235)||(220688-220738)
scaffold0004 (186-235)||(243864-243912)
[»] chr1 (29 HSPs)
chr1 (186-235)||(2268981-2269030)
chr1 (186-238)||(12284890-12284942)
chr1 (188-235)||(16234891-16234938)
chr1 (184-235)||(22599756-22599807)
chr1 (186-232)||(1900789-1900835)
chr1 (185-235)||(26701722-26701772)
chr1 (186-235)||(10757857-10757906)
chr1 (186-235)||(22201412-22201461)
chr1 (186-235)||(23036095-23036144)
chr1 (186-235)||(32785530-32785579)
chr1 (186-235)||(38283036-38283085)
chr1 (185-235)||(36134627-36134677)
chr1 (186-235)||(1578286-1578335)
chr1 (186-235)||(12613374-12613423)
chr1 (186-235)||(25448111-25448160)
chr1 (186-235)||(30893515-30893564)
chr1 (186-235)||(33255930-33255979)
chr1 (186-235)||(33276102-33276151)
chr1 (186-235)||(48704652-48704701)
chr1 (187-235)||(29216236-29216284)
chr1 (183-235)||(35402272-35402324)
chr1 (185-235)||(20909884-20909932)
chr1 (185-235)||(21191453-21191502)
chr1 (185-235)||(22464369-22464419)
chr1 (185-235)||(25447947-25447997)
chr1 (186-235)||(22154327-22154376)
chr1 (186-235)||(22426936-22426985)
chr1 (186-234)||(17400992-17401040)
chr1 (195-235)||(19717958-19717998)
[»] scaffold0113 (1 HSPs)
scaffold0113 (184-235)||(3200-3251)
[»] scaffold0026 (4 HSPs)
scaffold0026 (184-235)||(115973-116024)
scaffold0026 (185-235)||(8350-8400)
scaffold0026 (186-235)||(60464-60513)
scaffold0026 (186-235)||(151511-151560)
[»] chr4 (29 HSPs)
chr4 (184-235)||(37985408-37985459)
chr4 (186-235)||(40846533-40846582)
chr4 (183-239)||(12601539-12601595)
chr4 (184-235)||(14903932-14903983)
chr4 (185-235)||(6642131-6642180)
chr4 (186-235)||(10250278-10250325)
chr4 (189-235)||(12810812-12810858)
chr4 (185-235)||(19620706-19620756)
chr4 (186-235)||(3398306-3398355)
chr4 (186-235)||(3498080-3498129)
chr4 (186-235)||(9141309-9141358)
chr4 (183-235)||(11901670-11901720)
chr4 (186-235)||(16632886-16632935)
chr4 (186-235)||(19885138-19885187)
chr4 (186-235)||(22089982-22090031)
chr4 (186-235)||(23750887-23750936)
chr4 (186-235)||(29121821-29121870)
chr4 (186-235)||(37435136-37435185)
chr4 (186-235)||(41114363-41114411)
chr4 (186-235)||(55380689-55380738)
chr4 (186-235)||(55732241-55732290)
chr4 (184-218)||(10660795-10660829)
chr4 (184-218)||(10874940-10874974)
chr4 (186-235)||(12417223-12417270)
chr4 (184-218)||(17540887-17540921)
chr4 (186-235)||(17787648-17787695)
chr4 (186-235)||(8106113-8106162)
chr4 (183-235)||(413455-413507)
chr4 (191-235)||(15139676-15139720)
[»] scaffold0290 (1 HSPs)
scaffold0290 (185-235)||(18228-18278)
[»] scaffold0120 (2 HSPs)
scaffold0120 (185-235)||(36383-36433)
scaffold0120 (185-235)||(42572-42622)
[»] scaffold1782 (2 HSPs)
scaffold1782 (186-235)||(633-682)
scaffold1782 (186-235)||(795-843)
[»] scaffold0479 (1 HSPs)
scaffold0479 (186-235)||(10391-10440)
[»] scaffold0359 (1 HSPs)
scaffold0359 (186-235)||(5299-5348)
[»] scaffold0337 (2 HSPs)
scaffold0337 (186-235)||(15115-15164)
scaffold0337 (190-238)||(1312-1360)
[»] scaffold0324 (1 HSPs)
scaffold0324 (186-235)||(10391-10440)
[»] scaffold0251 (1 HSPs)
scaffold0251 (186-235)||(8143-8192)
[»] scaffold0065 (1 HSPs)
scaffold0065 (186-235)||(2157-2206)
[»] scaffold0411 (1 HSPs)
scaffold0411 (184-235)||(12663-12714)
[»] scaffold0161 (1 HSPs)
scaffold0161 (186-233)||(9747-9794)
[»] scaffold0035 (1 HSPs)
scaffold0035 (184-235)||(19080-19131)
[»] scaffold0426 (1 HSPs)
scaffold0426 (185-235)||(14065-14115)
[»] scaffold0395 (1 HSPs)
scaffold0395 (185-235)||(13141-13191)
[»] scaffold0334 (1 HSPs)
scaffold0334 (185-235)||(10247-10297)
[»] scaffold0227 (1 HSPs)
scaffold0227 (185-235)||(23114-23164)
[»] scaffold0084 (2 HSPs)
scaffold0084 (185-235)||(32872-32922)
scaffold0084 (186-235)||(49771-49820)
[»] scaffold0066 (1 HSPs)
scaffold0066 (185-235)||(60492-60542)
[»] scaffold0023 (1 HSPs)
scaffold0023 (185-235)||(104010-104060)
[»] scaffold0485 (1 HSPs)
scaffold0485 (186-235)||(8985-9034)
[»] scaffold0217 (1 HSPs)
scaffold0217 (186-235)||(19488-19537)
[»] scaffold0009 (1 HSPs)
scaffold0009 (185-230)||(9167-9212)
[»] scaffold0861 (1 HSPs)
scaffold0861 (184-235)||(4553-4604)
[»] scaffold0439 (1 HSPs)
scaffold0439 (185-235)||(6315-6365)
[»] scaffold0059 (1 HSPs)
scaffold0059 (185-235)||(13867-13917)
[»] scaffold0028 (1 HSPs)
scaffold0028 (185-235)||(5217-5267)
[»] scaffold0007 (1 HSPs)
scaffold0007 (185-235)||(143544-143594)
[»] scaffold0003 (1 HSPs)
scaffold0003 (185-235)||(89679-89729)
[»] scaffold0193 (1 HSPs)
scaffold0193 (186-235)||(16236-16285)
[»] scaffold0081 (1 HSPs)
scaffold0081 (185-234)||(41105-41153)
[»] scaffold0040 (1 HSPs)
scaffold0040 (185-218)||(1109-1142)
[»] scaffold0022 (2 HSPs)
scaffold0022 (186-235)||(39865-39913)
scaffold0022 (186-235)||(137925-137973)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-235)||(145323-145373)
[»] scaffold0488 (1 HSPs)
scaffold0488 (186-234)||(11212-11260)
[»] scaffold0210 (1 HSPs)
scaffold0210 (195-235)||(2084-2124)


Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 41565928 - 41566149
Alignment:
Q  17 gaatgtccttgtcgtttgataaaagtttattagacacaaattaattttcattgacatatcaaataatttcatattaatatccactagtggttgcctaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41565928 gaatgtccttgtcgtttgataaaagtttattagacacaaattaattttcattgacatatcaaataatttcatattaatatccactagtggttgcctaaaa 41566027  T
Q  117 caaatacgcctgggtcaccacctattggcaatctaagatacacaaaagaaacatggccaattttacatttgttggaacaaaatgtgtttgacattaccct 216  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  41566028 caaatacgcctgggttaccacctattggcaatctaagatacacaaaagaaacatggccaattttaca-ctgttggaacaaaatgtgtttgacattaccct 41566126  T
Q  217 ttaaaagttttgatgataataaa 239  Q
    || ||||||||||||||||||||    
T  41566127 ttgaaagttttgatgataataaa 41566149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19535938 - 19535988
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  19535938 ttgttggaacaaaatgtgtttaacattaccctttgaaagttttgatgataa 19535988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 21911026 - 21910974
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  21911026 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataataa 21910974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23412644 - 23412694
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  23412644 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 23412694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12352474 - 12352523
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  12352474 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 12352523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 26784839 - 26784790
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  26784839 tgttggaacaaaatgtgtttaacattatcctttaagagttttgatgataa 26784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33023147 - 33023098
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||    
T  33023147 tgttggaacaaaatgtgtttaacattaccctttgaaggttttgatgataa 33023098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 21198691 - 21198743
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||| ||||||||||| |||||||||||||  |||||||||||||||||    
T  21198691 tgttggaataaaatgtgtttaacattaccctttatgagttttgatgataataa 21198743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 89090 - 89140
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||||||| |||| | ||||||||||||||    
T  89090 ttgttggaacaaaatgtgtttaacattactctttgagagttttgatgataa 89140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 5430361 - 5430311
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  5430361 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 5430311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4887505 - 4887456
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  4887505 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 4887456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 6512103 - 6512152
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||||||| || |||||||||||||    
T  6512103 tgttggaacaaaatctgtttaacattaccctttgaaggttttgatgataa 6512152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7745301 - 7745350
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||| ||||||||| | ||||||||||||    
T  7745301 tgttggaacaaaatgtgtttaacatcaccctttaagatttttgatgataa 7745350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17815466 - 17815417
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  17815466 tgttggaacaaaatgtgtttaacattatcctttgaaggttttgatgataa 17815417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 42244197 - 42244147
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||| |||| |||| ||||||||||||||    
T  42244197 tttgttggaacaaaatgtgtttaacataaccc-ttaagagttttgatgataa 42244147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 20551362 - 20551312
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||| |||||||| |||||||||||| | ||||||||| ||||    
T  20551362 ttgttggaacaagatgtgtttaacattaccctttgagagttttgatcataa 20551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 21071893 - 21071947
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||| ||||||||||| |  |||| |||||| |||||||||||||||||    
T  21071893 tttgttggaataaaatgtgtttaatgttactctttaagagttttgatgataataa 21071947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 21099345 - 21099394
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | || |||||||||||    
T  21099345 ttgttggaacaaaatgtgtttaacattaccctttgagag-tttgatgataa 21099394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 6499721 - 6499672
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| | |||||||||| || |||||||||||||    
T  6499721 tgttggaacaaaatatgtttaatattaccctttgaatgttttgatgataa 6499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 642348 - 642400
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||| |||||| |||| |||||||||||| | ||||||||| |||||||    
T  642348 tgttggaataaaatgggtttaacattaccctttgagagttttgataataataa 642400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 9398399 - 9398451
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||| ||||| |||| ||| ||| | |||||||||||||||||    
T  9398399 tgttggaacaaaatatgtttaacatgaccttttgagagttttgatgataataa 9398451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 13649199 - 13649146
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13649199 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataataa 13649146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 13303319 - 13303267
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  13303319 tgttggaacaaaatgtgtttaacattaccctttgaaagttttgatgataataa 13303267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 21695870 - 21695820
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  21695870 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 21695820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 22577678 - 22577728
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22577678 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 22577728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 28409534 - 28409484
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  28409534 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 28409484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 13692839 - 13692790
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  13692839 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 13692790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 13730369 - 13730418
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  13730369 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 13730418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 13137582 - 13137632
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  13137582 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 13137632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 39284269 - 39284319
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  39284269 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 39284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 2500524 - 2500475
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  2500524 tgttggaacaaaatgtatttaacattaccctttaagagttttgatgataa 2500475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 10882833 - 10882882
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  10882833 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 10882882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24788551 - 24788502
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  24788551 tgttggaacaaaatgtgtttaacattaccctttaagagttttgttgataa 24788502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 30026390 - 30026341
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  30026390 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 30026341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 44467549 - 44467500
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  44467549 tgttggaacaaaatgtgtttaacattactctttaagagttttgatgataa 44467500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 15469966 - 15469914
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    ||||||||||||| |||||| |||||||||||| | |||||||||||||||||    
T  15469966 tgttggaacaaaaggtgtttaacattaccctttgagagttttgatgataataa 15469914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 9070073 - 9070023
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||||||||    
T  9070073 ttgttggaacaaaatgtgtttaacattaccctctgagagttttgatgataa 9070023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 13260282 - 13260332
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  13260282 ttgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 13260332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23279698 - 23279748
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  23279698 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgataataa 23279748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 2913280 - 2913329
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  2913280 tgttggaaaaaaatgtgtttaacattaccctttgagagttttgatgataa 2913329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 5000513 - 5000562
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||| ||| | ||||||||||||||    
T  5000513 tgttggaacaaaatgtgtttaacattaccatttgagagttttgatgataa 5000562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 11319903 - 11319854
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  11319903 tgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 11319854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 13880603 - 13880554
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  13880603 tgttggaacaaaatgtgtttaacattaccctttgagagttttgattataa 13880554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 14193578 - 14193529
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  14193578 tgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 14193529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15088988 - 15088939
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||| ||| |||||||||||| | ||||||||||||||    
T  15088988 tgttggaacaaaatgtttttaacattaccctttgagagttttgatgataa 15088939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23390688 - 23390737
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  23390688 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 23390737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 4494970 - 4494923
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||| | |||||||||| | ||||||||||||||    
T  4494970 ttggaacaaaatgtgtttaatattaccctttgagagttttgatgataa 4494923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 13031748 - 13031795
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||| ||||| |||||||||||| || |||||||||||||    
T  13031748 ttggaacaaaatatgtttaacattaccctttgaatgttttgatgataa 13031795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 16111539 - 16111590
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| || |||| | ||||||||||||    
T  16111539 tttgttggaacaaaatgtgtttaacattaacccttaagaattttgatgataa 16111590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 2265189 - 2265239
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||  || || |||||||||||||||||||    
T  2265189 ttgttggaacaaaatgtgtttaacgataacccttaaaagttttgatgataa 2265239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 12173982 - 12174032
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| || ||| || |||| ||||||||||||||    
T  12173982 ttgttggaacaaaatgtgtttaacgttaacccttaagagttttgatgataa 12174032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 15700948 - 15700998
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| || ||| || |||| ||||||||||||||    
T  15700948 ttgttggaacaaaatgtgtttaacgttaacccttaagagttttgatgataa 15700998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16316234 - 16316284
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||| |||||||||||||| |||||| ||||| | ||||||||||||||    
T  16316234 ttgttgaaacaaaatgtgtttaacattatcctttgagagttttgatgataa 16316284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9097899 - 9097947
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||| |||||||| | ||||||||||||||    
T  9097899 tgttggaacaaaatgtgtttaacactacccttt-agagttttgatgataa 9097947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33606185 - 33606136
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || || | ||||||||||||||    
T  33606185 tgttggaacaaaatgtgtttaacattaacccttgagagttttgatgataa 33606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 35952329 - 35952378
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| |||||||||||||| |||||| || |||| ||||||||||||||    
T  35952329 tgttgtaacaaaatgtgtttaacattaacccttaagagttttgatgataa 35952378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 33691382 - 33691434
Alignment:
Q  184 tttgttggaacaaaatgtg-tttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||| ||| |||||| ||||| | ||||||||||||||    
T  33691382 tttgttggaacaaaatgtgttttaacattatcctttgagagttttgatgataa 33691434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 15588 - 15536
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  15588 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataataa 15536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 17238611 - 17238663
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  17238611 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataataa 17238663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21233315 - 21233266
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  21233315 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 21233266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 25397917 - 25397971
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||||| | |||||| ||||| |||||||||||||||||    
T  25397917 tttgttggaacaaaatgtgtttaaaattaccttttaagagttttgatgataataa 25397971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12723910 - 12723959
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  12723910 tgttggaacaaaatctgtttaacattaccctttaagagttttgatgataa 12723959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38177346 - 38177395
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  38177346 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 38177395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 49553145 - 49553194
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  49553145 tgttggaacaaaatgtgtttaacattatcctttaagagttttgatgataa 49553194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 24775154 - 24775205
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  24775154 tttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 24775205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 3522767 - 3522717
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  3522767 ttgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 3522717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18142509 - 18142559
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||||| | |||| ||||||||||||||||    
T  18142509 ttgttggaacaaaatgtgtttaacattcctctttgaaagttttgatgataa 18142559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 22141247 - 22141197
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  22141247 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 22141197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 52920908 - 52920858
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  52920908 ttgttggaacaaaatgtgtttaacattatcctttgagagttttgatgataa 52920858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 13824534 - 13824485
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||| ||||| |||||||||||||| ||||||||||||||    
T  13824534 tgttggaataaaatatgtttaacattaccctttaagagttttgatgataa 13824485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14392663 - 14392712
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | | ||||||||||||    
T  14392663 tgttggaacaaaatgtgtttaacattaccctttgagatttttgatgataa 14392712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 14955960 - 14955911
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || ||||||||||| |||||||    
T  14955960 tgttggaacaaaatgtgtttaacattaacccttaaaagttttaatgataa 14955911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15903702 - 15903653
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| ||||||||| |||| ||||||||||||||    
T  15903702 tgttggaaaaaaatgtgtttaacattaccccttaagagttttgatgataa 15903653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 16032981 - 16032933
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  16032981 tgttggaacaaaatgtgttttacattacccttt-agagttttgatgataa 16032933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 20646656 - 20646607
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | |||||| |||||||    
T  20646656 tgttggaacaaaatgtgtttaacattaccctttgagagttttcatgataa 20646607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 20725599 - 20725551
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  20725599 tgttggaacaaaatgtgtttaacattacccttt-agagttttgatgataa 20725551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22803758 - 22803807
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||| | | ||||||||||||||    
T  22803758 tgttggaacaaaatgtgtttaacattaccctatgagagttttgatgataa 22803807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33583764 - 33583715
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  33583764 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 33583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33591253 - 33591204
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  33591253 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 33591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33598384 - 33598335
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  33598384 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 33598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 6091237 - 6091182
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    ||||||||||||||||||||||| |||||| ||||| | | ||||||| |||||||    
T  6091237 atttgttggaacaaaatgtgtttaacattatcctttgagaattttgatcataataa 6091182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 14969819 - 14969776
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagtttt 227  Q
    |||||||||||||||||||||| |||||||||||| | ||||||    
T  14969819 tttgttggaacaaaatgtgtttaacattaccctttgagagtttt 14969776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 18118323 - 18118370
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| | |||| |||||||||||| ||||||||||||||||    
T  18118323 ttggaacaaaacgcgtttaacattaccctttgaaagttttgatgataa 18118370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 53056387 - 53056434
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||| |||||| || |||| ||||||||||||||    
T  53056387 ttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 53056434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9510562 - 9510609
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  9510562 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 9510609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9518537 - 9518584
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  9518537 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 9518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 12968846 - 12968799
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  12968846 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 12968799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16658299 - 16658348
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||    
T  16658299 ttgttggaacaaaatatgtttaacat-accctttaagagttttgatgataa 16658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 19197519 - 19197566
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| |||| ||||||||||||  |||||||||||||||    
T  19197519 tgttggaacaaaatgcgtttaacattacccttt--aagttttgatgataa 19197566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19249064 - 19249113
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| | |||||||||| | ||||||||||||||    
T  19249064 ttgttggaacaaaatgtgtttaatattacccttt-agagttttgatgataa 19249113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 28582610 - 28582560
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||| ||||||| ||| |||||||| | ||||||||||||||    
T  28582610 ttgttggaacaaagtgtgtttaacactaccctttgagagttttgatgataa 28582560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 49990775 - 49990725
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||| ||   ||||||||||||||||||||    
T  49990775 ttgttggaacaaaatgtgttttacaataaattttaaaagttttgatgataa 49990725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 12962757 - 12962810
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    ||||| ||||||| ||||||| |||||| ||||| | |||||||||||||||||    
T  12962757 ttgtttgaacaaattgtgtttaacattaacctttgagagttttgatgataataa 12962810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 46349485 - 46349534
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || || | ||||||||||||||    
T  46349485 tgttggaacaaaatgtgtttaacattaacccttgagagttttgatgataa 46349534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 46828572 - 46828523
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||  || || || |||||||||||||||||||    
T  46828572 tgttggaacaaaatgtgtttagcaataacccttaaaagttttgatgataa 46828523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 25829607 - 25829552
Alignment:
Q  180 tacatttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  25829607 tacatttgttggaacaaaatgtgtttaacattaccctttgaaggttttgatgataa 25829552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 38781879 - 38781828
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  38781879 tttgttggaacaaaatgtgtttaacattatcctttaaaagttttgatgataa 38781828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 6573739 - 6573790
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  6573739 tttgttggaacaaaatgtgtataacattaccctttaaaggttttgatgataa 6573790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18376546 - 18376596
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  18376546 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 18376596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 22454592 - 22454642
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  22454592 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 22454642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9014971 - 9015020
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  9014971 tgttggaacaaaatgtgtttaactttaccctttaagagttttgatgataa 9015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 10009371 - 10009420
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  10009371 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 10009420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 38631451 - 38631402
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  38631451 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 38631402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 40782968 - 40782919
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  40782968 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 40782919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 31800485 - 31800537
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| |||||| || |||| |||||||||||||||||    
T  31800485 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataataa 31800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 23183982 - 23184033
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  23183982 tttgttggaacaaaatgtgtttaacattatcctttgagagttttgatgataa 23184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 23595239 - 23595290
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  23595239 tttgttggaacaaaatgtgtttaacattatcctttgagagttttgatgataa 23595290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 22318110 - 22318060
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| | |||||||||| | ||||||||||||||    
T  22318110 ttgttggaacaaaatgtgtttaaaattaccctttgagagttttgatgataa 22318060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 28140236 - 28140286
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  28140236 ttgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 28140286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 28711315 - 28711365
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  28711315 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 28711365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 17966752 - 17966801
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  17966752 tgttggaataaaatgtgtttaacattaccctttgagagttttgatgataa 17966801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 21536852 - 21536901
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| |||||||| |||||||||||| | ||||||||||||||    
T  21536852 tgttggaacaacatgtgtttaacattaccctttgagagttttgatgataa 21536901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 24377567 - 24377519
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgat 233  Q
    ||||||||||||||||||||| |||||| ||||| || |||||||||||    
T  24377567 ttgttggaacaaaatgtgtttaacattatcctttgaatgttttgatgat 24377519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 24964186 - 24964134
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||| ||||||||||||||| |||||| ||||| || ||||||||||||||||    
T  24964186 tgtttgaacaaaatgtgtttaacattatcctttgaaggttttgatgataataa 24964134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 20151652 - 20151702
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| ||||||||||||  | |||||||||||||    
T  20151652 tttgttggaacaaaatgtgtttaacattacccttt-gaggttttgatgataa 20151702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19115625 - 19115578
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  19115625 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 19115578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 22272631 - 22272582
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||| ||| |||||||||||| | ||||||||||||||    
T  22272631 ttgttggaacaaaatgtatttaacattacccttt-agagttttgatgataa 22272582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 24850268 - 24850318
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||| ||||    
T  24850268 ttgttagaacaaaatgtgtttaacattaccctttgagagttttgattataa 24850318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 34321504 - 34321554
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||| || || |||| ||||||||||||||    
T  34321504 ttgttggaacaaaatgtgtttaacaataacccttaagagttttgatgataa 34321554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 41121351 - 41121400
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  41121351 ttgttggaataaaatgtgtttaacattacccttt-agagttttgatgataa 41121400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 45086736 - 45086790
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||| ||||||||| | |||||| |||| || |||||||||||||||||    
T  45086736 tttgttggaataaaatgtgtctaacattaaccttaaagagttttgatgataataa 45086790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19540895 - 19540846
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| | |||||||| |||||    
T  19540895 tgttggaacaaaatgtgtttaacattatcctttgagagttttgaggataa 19540846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22260902 - 22260853
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | |||| || ||||||    
T  22260902 tgttggaacaaaatgtgtttaacattaccctttgagagttgtggtgataa 22260853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22802971 - 22802922
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||| |||||||||||| |||||| || |||| ||||||||||||||    
T  22802971 tgttggatcaaaatgtgtttaacattaaccgttaagagttttgatgataa 22802922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24576545 - 24576496
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||| ||| | ||||||||||||||    
T  24576545 tgttggaacaaaatatgtttaacattaccttttgagagttttgatgataa 24576496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 25189850 - 25189801
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| ||| |||||||| | ||||||||||||||    
T  25189850 tgttggaataaaatgtgtttaacaataccctttgagagttttgatgataa 25189801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 28700815 - 28700864
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||| || |||| ||||||||||||||    
T  28700815 tgttggaataaaatgtgtttaacattaacccttaagagttttgatgataa 28700864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 13963613 - 13963665
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||| ||||||| ||| | |||||||||| | |||||||||||||||||    
T  13963613 tgttggaataaaatgtctttaatattaccctttgagagttttgatgataataa 13963665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 24302549 - 24302598
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| ||| ||||||||   ||||||||||||||    
T  24302549 tttgttggaacaaaatgtgtttaacaatacccttt--gagttttgatgataa 24302598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 26618705 - 26618737
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattacccttt 218  Q
    |||||||||||||||||||| ||||||||||||    
T  26618705 tgttggaacaaaatgtgtttaacattacccttt 26618737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18685067 - 18685117
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18685067 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 18685117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18730632 - 18730682
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18730632 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 18730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 22745966 - 22745913
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  22745966 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataataa 22745913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23263259 - 23263308
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  23263259 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 23263308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18120779 - 18120829
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  18120779 ttgttggaacaaaatgtatttgacattaccctttgagagttttgatgataa 18120829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 24551795 - 24551743
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  24551795 atttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 24551743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 29693814 - 29693763
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  29693814 tttgttggaacaaaatgtgtttaacattatcctttgagagttttgatgataa 29693763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 39696682 - 39696631
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  39696682 tttgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 39696631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 15335697 - 15335747
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  15335697 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 15335747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 15424762 - 15424812
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  15424762 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 15424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 15516066 - 15516116
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  15516066 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 15516116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 16680961 - 16681011
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| || ||| |||||||||    
T  16680961 ttgttggaacaaaatgtgtttaacattaccctttgaaggttctgatgataa 16681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20382051 - 20382101
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  20382051 ttgttggaacaaaatgtgtttaacattaacctttgagagttttgatgataa 20382101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23184897 - 23184947
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||||||||| || |||||||||||||    
T  23184897 ttgttggaacaaaatatgtttaacattaccctttgaaggttttgatgataa 23184947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 24646833 - 24646783
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||| |||||||| |||||| ||||||| ||||||||||||||    
T  24646833 ttgttggaacaatatgtgtttaacattaacctttaagagttttgatgataa 24646783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 24832709 - 24832759
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  24832709 ttgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 24832759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19156676 - 19156627
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||| |||||||| | ||||||||||||||    
T  19156676 tgttggaacaaaatgtgtttaacactaccctttgagagttttgatgataa 19156627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 20255225 - 20255274
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  20255225 tgttggaacaaaatgtgttgaacattaccctttgagagttttgatgataa 20255274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 43645282 - 43645234
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  43645282 tgttggaacaaaatgtgtttaacattacccttt-agagttttgatgataa 43645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 17702212 - 17702172
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  17702212 aaaatgtgtttaacattaccctttaagagttttgatgataa 17702172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 19956004 - 19956055
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||| ||||||||||| |||||||||||| | |||||||||||||||||    
T  19956004 tgttggaataaaatgtgtttaacattacccttt-agagttttgatgataataa 19956055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 18320849 - 18320896
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||||||    
T  18320849 ttggaacaaaatgtgtttaacattactctttgagagttttgatgataa 18320896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 45538113 - 45538160
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||| |||||| || |||| ||||||||||||||    
T  45538113 ttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 45538160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 17441477 - 17441523
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgat 230  Q
    ||||||||||| |||||||||| |||||||||||| | |||||||||    
T  17441477 tttgttggaaccaaatgtgtttaacattaccctttgagagttttgat 17441523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 21933395 - 21933345
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||| |||| |||||||||||| | |||||| |||||||    
T  21933395 ttgttggaacaaaatgcgtttaacattaccctttgagagtttttatgataa 21933345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 16189495 - 16189462
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattacccttt 218  Q
    ||||||||||||||||||||| ||||||||||||    
T  16189495 ttgttggaacaaaatgtgtttaacattacccttt 16189462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17267966 - 17267917
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||  |||||||||| |||||||||||| | ||||||||||||||    
T  17267966 tgttggaaataaatgtgtttaacattaccctttgagagttttgatgataa 17267917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19708002 - 19707954
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  19708002 tgttggaacaaaatgtgtttaacattaaccttt-agagttttgatgataa 19707954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 30421097 - 30421146
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  30421097 tgttggaacaaaatatgtttaacattatcctttgaaggttttgatgataa 30421146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 602395 - 602440
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||    
T  602395 ttggaacaaaatgtgta--acattaccctttaagagttttgatgataa 602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 30314272 - 30314324
Alignment:
Q  184 tttgttggaacaaaatgtgtttgac-attaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| || |||| |||| | |||||||||||||||    
T  30314272 tttgttggaacaaaatgtgtttcacaattaaccttaataagttttgatgataa 30314324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 34451329 - 34451379
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  34451329 ttgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 34451379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 19689221 - 19689170
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  19689221 tttgttggaacaaaatgtgtttaacattacccttttagagttttgatgataa 19689170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 26971854 - 26971905
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  26971854 tttgttggaacaaaatgtgtttaacattagcctttaagagttttgatgataa 26971905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 24117332 - 24117282
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  24117332 ttgttggaacaaaatgtgtttaacattaccttttgaaagttttgatgataa 24117282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 14100119 - 14100168
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  14100119 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 14100168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19086653 - 19086604
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  19086653 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 19086604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 16529026 - 16528974
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| ||||||||||||   |||||||||||||||||    
T  16529026 tgttggaacaaaatgtgtttaacattaccctttgcgagttttgatgataataa 16528974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 32544770 - 32544718
Alignment:
Q  179 ttacatttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatg 231  Q
    |||||| |||||||||||||||||||| |||||||||||| | ||||||||||    
T  32544770 ttacatatgttggaacaaaatgtgtttaacattaccctttgagagttttgatg 32544718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 19624467 - 19624416
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||| |||||||||||| |||||||||||| | ||||||||||||||    
T  19624467 tttgttggagcaaaatgtgtttaacattaccctttgagagttttgatgataa 19624416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 13602658 - 13602608
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||| ||| |||||||||||| | ||||||||||||||    
T  13602658 ttgttggaacaaaatgtttttaacattaccctttgagagttttgatgataa 13602608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 26944054 - 26944005
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  26944054 ttgttggaacaaaatgtgtttaacattacccttt-agagttttgatgataa 26944005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 29918507 - 29918457
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||| ||||||| | ||||||||||||||    
T  29918507 ttgttggaacaaaatgtgtttaacatcaccctttgagagttttgatgataa 29918457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7618057 - 7618106
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  7618057 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 7618106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9718346 - 9718297
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  9718346 tgttggaataaaatgtgtttaacattaccctttgagagttttgatgataa 9718297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15955190 - 15955141
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  15955190 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 15955141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 17381933 - 17381884
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  17381933 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 17381884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 20112369 - 20112409
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  20112369 aaaatgtgtttaacattaccctttaagagttttgatgataa 20112409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 139023 - 139066
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  139023 aaaatgtgtttgacattaacccttaagagttttgatgataataa 139066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 147044 - 147087
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  147044 aaaatgtgtttgacattaacccttaagagttttgatgataataa 147087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16877719 - 16877669
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||| || |||| | ||||||||||||    
T  16877719 ttgttggaacaaaatgtgtttaacattaacccttaagaattttgatgataa 16877669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 18378758 - 18378708
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||| ||||||||||| |||||| ||||| | ||||||||||||||    
T  18378758 ttgttggaaaaaaatgtgtttaacattaaccttttagagttttgatgataa 18378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19626326 - 19626279
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  19626326 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 19626279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 21625603 - 21625554
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  21625603 ttgttggaa-aaaatgtgtttaacattaccctttgagagttttgatgataa 21625554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 13436035 - 13435986
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||| | |||||| ||||| | ||||||||||||||    
T  13436035 tgttggaacaaaatgtgtctaacattatcctttgagagttttgatgataa 13435986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 17928305 - 17928272
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattacccttt 218  Q
    ||||||||||||||||||||| ||||||||||||    
T  17928305 ttgttggaacaaaatgtgtttaacattacccttt 17928272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19473307 - 19473259
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  19473307 tgttggaacaaaatgtgtttaacattatccttt-agagttttgatgataa 19473259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 7812504 - 7812472
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattacccttt 218  Q
    |||||||||||||||||||| ||||||||||||    
T  7812504 tgttggaacaaaatgtgtttaacattacccttt 7812472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 15987688 - 15987648
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| |||||||||||| | ||||||||||||||    
T  15987688 aaaatgtgtttaacattaccctttgagagttttgatgataa 15987648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 24508005 - 24508053
Alignment:
Q  190 ggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||| |||||| | ||| | |||||||||||||||||    
T  24508005 ggaacaaaatgtgtttaacattaacttttgagagttttgatgataataa 24508053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 53008 - 52959
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  53008 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 52959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 56960 - 56911
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  56960 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 56911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 377183 - 377232
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  377183 tgttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 30479 - 30529
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  30479 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 30529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 220738 - 220688
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||||||||    
T  220738 ttgttcgaacaaaatgtgtttaacattaccctttgagagttttgatgataa 220688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 243864 - 243912
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  243864 tgttggaacaaaatgtgtttaacattacccttt-agagttttgatgataa 243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 2269030 - 2268981
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  2269030 tgttggaacaaaatgtgtttaacattatcctttaaaagttttgatgataa 2268981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 12284942 - 12284890
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  12284942 tgttggaacaaaatgtgtttaacattaccttttaagagttttgatgataataa 12284890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 16234891 - 16234938
Alignment:
Q  188 ttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  16234891 ttggaacaaaatgtgtttaacattaccctttaagagttttgatgataa 16234938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 22599756 - 22599807
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  22599756 tttgttgaaacaaaatgtgtttaacattaccctttgaaagttttgatgataa 22599807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 1900835 - 1900789
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatga 232  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  1900835 tgttggaacaaaatgtgtttgacattaccctttgagagttttgatga 1900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 26701722 - 26701772
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  26701722 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 26701772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10757906 - 10757857
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||||||    
T  10757906 tgttgaaacaaaatgtgtttaacattaccctttaagagttttgatgataa 10757857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22201412 - 22201461
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  22201412 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 22201461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23036095 - 23036144
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  23036095 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 23036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 32785530 - 32785579
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  32785530 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 32785579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 38283085 - 38283036
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  38283085 tgtttgaacaaaatgtgtttgacattaccctttgagagttttgatgataa 38283036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 36134677 - 36134627
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||||||||    
T  36134677 ttgttggaacaaaatgtgtttaacattaccctctgatagttttgatgataa 36134627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 1578335 - 1578286
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| || ||||||||| | ||||||||||||||    
T  1578335 tgttggaacaaaatgtgtttaacgttaccctttgagagttttgatgataa 1578286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12613374 - 12613423
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  12613374 tgttggaacaaaatgtgtttaacattaccctttgagagttttgataataa 12613423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 25448111 - 25448160
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  25448111 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 25448160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 30893564 - 30893515
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  30893564 tgttggaataaaatgtgtttaacattaccctttgagagttttgatgataa 30893515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 33255930 - 33255979
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||||   ||||||||||||    
T  33255930 tgttggaacaaaatgtgtttaacattaccctttaaggattttgatgataa 33255979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 33276102 - 33276151
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||||   ||||||||||||    
T  33276102 tgttggaacaaaatgtgtttaacattaccctttaaggattttgatgataa 33276151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 48704701 - 48704652
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  48704701 tgttggaacaaaatgtgtttaacattatcctttgagagttttgatgataa 48704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 29216284 - 29216236
Alignment:
Q  187 gttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  29216284 gttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 29216236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 35402324 - 35402272
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||||| ||||||| |||| | || |||||||||||    
T  35402324 atttgttggaacaaaatgtgtttaacattactctttgagagatttgatgataa 35402272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 20909932 - 20909884
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  20909932 ttgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 20909884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 21191453 - 21191502
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||| | |||||||||||| |||||||||| |||||    
T  21191453 ttgttggaacaaaatgtgtctaacattacccttt-aaagttttgaggataa 21191502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 22464369 - 22464419
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||| ||||| | ||||||||||||||    
T  22464369 ttgttggaacaaaatatgtttaacattaacctttgagagttttgatgataa 22464419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 25447947 - 25447997
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||| ||||| | ||||||||||||||    
T  25447947 ttgttggaacaaaatatgtttaacattaacctttgagagttttgatgataa 25447997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22154376 - 22154327
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| |||||||||||||  | |||||||||||| ||||||||||||||    
T  22154376 tgttgaaacaaaatgtgttaaaaattaccctttaagagttttgatgataa 22154327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22426936 - 22426985
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||| ||||||| |||||| |||||||    
T  22426936 tgttggaacaaaatatgtttaacattatcctttaagagttttaatgataa 22426985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 17401040 - 17400992
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgata 234  Q
    |||||||||||||| |||||  ||||||||||| | |||||||||||||    
T  17401040 tgttggaacaaaatatgtttaccattaccctttgagagttttgatgata 17400992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 19717998 - 19717958
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| |||||||||||| || |||||||||||||    
T  19717998 aaaatgtgtttaacattaccctttgaaggttttgatgataa 19717958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 3251 - 3200
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  3251 tttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 3200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 116024 - 115973
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  116024 tttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 115973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8400 - 8350
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  8400 ttgttggaacaaaatgtgtttaacattacactttaagagttttgatgataa 8350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 60513 - 60464
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  60513 tgttggaacaaaatgtgtttaacattaccctttaagagtttagatgataa 60464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 151511 - 151560
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||  || |||||||| | ||||||||||||||    
T  151511 tgttggaacaaaatgtgtttagcactaccctttgagagttttgatgataa 151560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 37985408 - 37985459
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  37985408 tttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 37985459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 40846582 - 40846533
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||    
T  40846582 tgttggaacaaaatgtgtttaacattaccctttgaatgttttgatgataa 40846533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 12601595 - 12601539
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataaa 239  Q
    |||||||| || ||||||||||| |||||||||||| | ||||||||||||||||||    
T  12601595 atttgttgtaataaaatgtgtttaacattaccctttgagagttttgatgataataaa 12601539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 14903932 - 14903983
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||||||||||||||||| | |||| | |||||||    
T  14903932 tttgttggaacaaaatgtgtttgacattaccctttgagagttgtaatgataa 14903983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 6642180 - 6642131
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  6642180 ttgttggaacaaaatgtgtttaacattaccctttagaa-ttttgatgataa 6642131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10250325 - 10250278
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  10250325 tgttggaacaaaatgtgtttaacattacccttt--aagttttgatgataa 10250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 12810812 - 12810858
Alignment:
Q  189 tggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||| |||||||||||| | ||||||||||||||    
T  12810812 tggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 12810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 19620706 - 19620756
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  19620706 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgataataa 19620756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3398355 - 3398306
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||||| | ||||||| ||||    
T  3398355 tgttggaacaaaatgtgtttaacattaccctttaagaattttgatcataa 3398306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3498129 - 3498080
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  3498129 tgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 3498080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9141358 - 9141309
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||| |||||| | ||||||||||||    
T  9141358 tgttggaacaaaatgtgtttaacattactctttaagacttttgatgataa 9141309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 11901720 - 11901670
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  11901720 atttgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 11901670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 16632935 - 16632886
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  16632935 tgttggaacaaaatgtgtttaacattaacctttgagagttttgatgataa 16632886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19885187 - 19885138
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||| |||||||||| |||||||||||| | ||||||||||||||    
T  19885187 tgttggaactaaatgtgtttaacattaccctttgagagttttgatgataa 19885138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 22090031 - 22089982
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||| ||||||||||||||| |||||||||||| | ||||||||||||||    
T  22090031 tgttagaacaaaatgtgtttaacattaccctttgagagttttgatgataa 22089982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 23750936 - 23750887
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| | |||||||||| | ||||||||||||||    
T  23750936 tgttggaacaaaatgtgtttaatattaccctttgagagttttgatgataa 23750887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 29121870 - 29121821
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  29121870 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 29121821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 37435136 - 37435185
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  37435136 tgttggaacaaaatgtgtttaacattaccctttcagagttttgattataa 37435185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 41114363 - 41114411
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  41114363 tgttggaacaaaatgtgtttaacattacccttt-agagttttgatgataa 41114411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 55380738 - 55380689
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| ||| ||||||||||||    
T  55380738 tgttggaacaaaatgtgtttaacattatcctttgaaaattttgatgataa 55380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 55732290 - 55732241
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||||    
T  55732290 tgttggaacaaaatgtgtttaacattaacccttaagagttttgatgataa 55732241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 10660795 - 10660829
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattacccttt 218  Q
    |||||||||||||||||||||| ||||||||||||    
T  10660795 tttgttggaacaaaatgtgtttaacattacccttt 10660829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 10874940 - 10874974
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattacccttt 218  Q
    |||||||||||||||||||||| ||||||||||||    
T  10874940 tttgttggaacaaaatgtgtttaacattacccttt 10874974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12417223 - 12417270
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  12417223 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 12417270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 17540921 - 17540887
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattacccttt 218  Q
    |||||||||||||||||||||| ||||||||||||    
T  17540921 tttgttggaacaaaatgtgtttaacattacccttt 17540887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 17787648 - 17787695
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  17787648 tgttggaacaaaatgtgtttaacattacccttt--gagttttgatgataa 17787695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8106162 - 8106113
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||  ||||| || |||| ||||||||||||||    
T  8106162 tgttggaacaaaatgtgtttatcattaacccttaagagttttgatgataa 8106113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 413507 - 413455
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||||| |||||| |  || | ||||||||||||||    
T  413507 atttgttggaacaaaatgtgtttaacattaactcttgagagttttgatgataa 413455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 15139720 - 15139676
Alignment:
Q  191 gaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| |||||||||||| |  |||||||||||||    
T  15139720 gaacaaaatgtgtttaacattaccctttgagtgttttgatgataa 15139676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 18228 - 18278
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  18228 ttgttagaacaaaatgtgtttgacattaccctttgagagttttgatgataa 18278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 36383 - 36433
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  36383 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 36433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 42622 - 42572
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  42622 ttgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 42572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold1782
Description:

Target: scaffold1782; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 633 - 682
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  633 tgttggaacaaaatgtgtttaacattacccttcaagagttttgatgataa 682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1782; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 843 - 795
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  843 tgttggaataaaatgtgtttaacattacccttt-agagttttgatgataa 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10440 - 10391
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  10440 tgttggaacaaaatctgtttaacattaccctttaagagttttgatgataa 10391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 5299 - 5348
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  5299 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 5348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15164 - 15115
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  15164 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 15115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 1360 - 1312
Alignment:
Q  190 ggaacaaaatgtgtttgacattaccctttaaaagttttgatgataataa 238  Q
    |||||||||||||||| |||||| | ||| | |||||||||||||||||    
T  1360 ggaacaaaatgtgtttaacattaacttttgagagttttgatgataataa 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10440 - 10391
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  10440 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 10391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8192 - 8143
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  8192 tgttggaagaaaatgtgtttaacattaccctttgaaagttttgatgataa 8143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 2206 - 2157
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  2206 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 2157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 12714 - 12663
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||||||||    
T  12714 tttggtggaacaaaatgtgtttaacattaccctttgagagttttgatgataa 12663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 9747 - 9794
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgat 233  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||    
T  9747 tgttggaacaaaatgtgtttaacattaccctttgagagttttgatgat 9794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 19080 - 19131
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||| |||| ||||||| | ||||||||||||||    
T  19080 tttgttggaacaaaatgtgtttaacataaccctttgagagttttgatgataa 19131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14115 - 14065
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| || ||||||||| | ||||||||||||||    
T  14115 ttgttggaacaaaatgtgtttaactttaccctttgagagttttgatgataa 14065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 13141 - 13191
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||| ||| |||||||||||| | ||||||||||||||    
T  13141 ttgttggaacaaaatgtatttaacattaccctttgagagttttgatgataa 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 10297 - 10247
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| ||||||||| || | ||||||||||||||    
T  10297 ttgttggaacaaaatgtgtttaacattacccattgagagttttgatgataa 10247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 23164 - 23114
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  23164 ttgttggaacaaaatatgtttaacattaccctttgagagttttgatgataa 23114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 32922 - 32872
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||| ||||||||||||||| |||||||||||| || |||||||||||||    
T  32922 ttgttagaacaaaatgtgtttaacattaccctttgaaggttttgatgataa 32872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 49820 - 49771
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||  |||| |||||||||||| || |||||||||||||    
T  49820 tgttggaacaaaataagtttaacattaccctttgaaggttttgatgataa 49771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 60492 - 60542
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||| |||||||||||| | |||||| |||||||    
T  60492 ttgttggaacaaaatgtgtttaacattaccctttgagagttttcatgataa 60542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 104060 - 104010
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||| |||||||||| |||||| ||||||||||||||||| ||||    
T  104060 ttgttggaaccaaatgtgtttaacattatcctttaaaagttttgataataa 104010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 8985 - 9034
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||||||||| | ||||||| ||||||    
T  8985 tgttggaacaaaatgtgtttaacattaccctttcagagttttggtgataa 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19537 - 19488
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||| |||||| ||||| | ||||||||||||||    
T  19537 tgttggaacaaaatgtgtttaacattatcctttgagagttttgatgataa 19488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 9167 - 9212
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgat 230  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||    
T  9167 ttgttggaacaaaatgtgtttaacaataccctttaagagttttgat 9212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 4553 - 4604
Alignment:
Q  184 tttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||| |||| |||||||||| |||||||||||| | ||||||||||||||    
T  4553 tttgttagaactaaatgtgtttaacattaccctttgagagttttgatgataa 4604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 6315 - 6365
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||  |||||| || |||| ||||||||||||||    
T  6315 ttgttggaacaaaatgtgttgaacattaacccttaagagttttgatgataa 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 13917 - 13867
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||| |||| |||||| ||||| | ||||||||||||||    
T  13917 ttgttggaacaaaatgcgtttaacattatcctttgagagttttgatgataa 13867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 5217 - 5267
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||||  ||||| || |||| ||||||||||||||    
T  5217 ttgttggaacaaaatgtgtttatcattaacccttaagagttttgatgataa 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 143594 - 143544
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||| ||| |||||||||||||| | | ||||||||||    
T  143594 ttgttggaacaaaatgtatttaacattaccctttaagattcttgatgataa 143544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 89679 - 89729
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||| ||||| |||||| ||||| | ||||||||||||||    
T  89679 ttgttggaacaaaatatgtttaacattaacctttgagagttttgatgataa 89729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 16285 - 16236
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||| ||||| ||||||| |||| | ||||||||||||||    
T  16285 tgttggaacaaaatttgtttaacattacactttcagagttttgatgataa 16236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 41153 - 41105
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgata 234  Q
    ||||||||||||||||||||| |||||| ||||| | |||||||||||||    
T  41153 ttgttggaacaaaatgtgtttaacattagccttt-agagttttgatgata 41105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 1109 - 1142
Alignment:
Q  185 ttgttggaacaaaatgtgtttgacattacccttt 218  Q
    ||||||||||||||||||||| ||||||||||||    
T  1109 ttgttggaacaaaatgtgtttaacattacccttt 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 39913 - 39865
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||||    
T  39913 tgttggaacaaaatgtgtta-acattaccctttaagagttttggtgataa 39865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 137973 - 137925
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||||    
T  137973 tgttggaacaaaatgtgtta-acattaccctttaagagttttggtgataa 137925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 145373 - 145323
Alignment:
Q  183 atttgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||||||||||||||| |||| |||||||   ||||||||||||||    
T  145373 atttgttggaacaaaatgtgtttaacatcacccttt--gagttttgatgataa 145323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 11212 - 11260
Alignment:
Q  186 tgttggaacaaaatgtgtttgacattaccctttaaaagttttgatgata 234  Q
    ||||| |||||||||||||| |||||| || |||| |||||||||||||    
T  11212 tgttgaaacaaaatgtgtttaacattaacccttaagagttttgatgata 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 2124 - 2084
Alignment:
Q  195 aaaatgtgtttgacattaccctttaaaagttttgatgataa 235  Q
    ||||||||||| |||||||| ||||| ||||||||||||||    
T  2124 aaaatgtgtttaacattaccttttaagagttttgatgataa 2084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University