View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17781_low_22 (Length: 222)
Name: NF17781_low_22
Description: NF17781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17781_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 34901001 - 34900814
Alignment:
| Q |
15 |
caaaggtacaccattttttaataagacatacatgaatgaaataagaaactaatatcaacaaatctagacaacaaaaactcattcattcggaggagaaact |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
34901001 |
caaaggtacaccattttttaataagacatacatgaatgaaataagaa-ctaatatcaacaaatctagacaacaaaaactaattcattcggaggagaaact |
34900903 |
T |
|
| Q |
115 |
atctcgtgaaggggaaaagaagaatcataaaatggaattagggtttccttcctaaagtttccattagcctcattagaagttgaagcaac |
203 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34900902 |
atctcgtgaagaggaaaagaagaatcataaaatggaattagggtttccttcctaaagtttccattagcctcattagaagttgaagcaac |
34900814 |
T |
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