View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17781_low_9 (Length: 297)

Name: NF17781_low_9
Description: NF17781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17781_low_9
NF17781_low_9
[»] chr5 (47 HSPs)
chr5 (13-232)||(43308702-43308921)
chr5 (13-129)||(5112363-5112480)
chr5 (13-128)||(14919578-14919695)
chr5 (13-129)||(24886110-24886229)
chr5 (13-128)||(35826533-35826649)
chr5 (24-125)||(22255193-22255296)
chr5 (26-128)||(22974145-22974248)
chr5 (13-128)||(8741936-8742053)
chr5 (13-128)||(27330315-27330429)
chr5 (13-128)||(1429195-1429311)
chr5 (13-128)||(39572828-39572944)
chr5 (28-125)||(27318552-27318650)
chr5 (17-129)||(699158-699271)
chr5 (13-128)||(7693239-7693355)
chr5 (13-128)||(23116272-23116388)
chr5 (27-128)||(17158094-17158199)
chr5 (23-128)||(31705671-31705777)
chr5 (23-128)||(40133394-40133500)
chr5 (13-125)||(5829909-5830026)
chr5 (13-128)||(14409377-14409492)
chr5 (17-128)||(35511531-35511643)
chr5 (13-128)||(36860432-36860548)
chr5 (73-128)||(15724499-15724554)
chr5 (13-123)||(30969374-30969485)
chr5 (23-128)||(25500986-25501092)
chr5 (58-128)||(26317780-26317850)
chr5 (23-128)||(36866771-36866877)
chr5 (71-128)||(12910359-12910416)
chr5 (88-129)||(13380503-13380544)
chr5 (13-125)||(33908245-33908358)
chr5 (23-125)||(7208923-7209027)
chr5 (13-128)||(38528287-38528402)
chr5 (13-128)||(8466754-8466869)
chr5 (73-128)||(19119868-19119923)
chr5 (13-125)||(5837567-5837680)
chr5 (69-128)||(16004483-16004543)
chr5 (68-124)||(31786752-31786808)
chr5 (18-124)||(8436979-8437086)
chr5 (58-125)||(13956441-13956508)
chr5 (87-129)||(5748436-5748478)
chr5 (23-128)||(32563158-32563264)
chr5 (67-128)||(35504176-35504240)
chr5 (82-128)||(35933911-35933957)
chr5 (13-129)||(9200241-9200358)
chr5 (147-180)||(43291863-43291896)
chr5 (13-124)||(26268087-26268199)
chr5 (89-129)||(36055874-36055914)
[»] chr8 (35 HSPs)
chr8 (13-125)||(10555268-10555381)
chr8 (13-125)||(23854497-23854610)
chr8 (13-128)||(37970585-37970701)
chr8 (13-128)||(1150171-1150287)
chr8 (13-128)||(43643661-43643777)
chr8 (13-125)||(1204938-1205051)
chr8 (13-129)||(30654649-30654766)
chr8 (71-128)||(7891073-7891130)
chr8 (13-128)||(5300012-5300128)
chr8 (13-128)||(12876117-12876233)
chr8 (17-128)||(34894975-34895087)
chr8 (13-128)||(38643986-38644102)
chr8 (25-128)||(8803888-8803988)
chr8 (13-128)||(6098584-6098700)
chr8 (13-128)||(13307631-13307747)
chr8 (72-128)||(15009250-15009306)
chr8 (13-128)||(27082904-27083020)
chr8 (13-124)||(31933952-31934064)
chr8 (13-128)||(36695032-36695148)
chr8 (23-128)||(16446951-16447057)
chr8 (13-125)||(16222874-16222987)
chr8 (71-128)||(35459823-35459880)
chr8 (22-124)||(40862431-40862535)
chr8 (23-129)||(465849-465956)
chr8 (89-128)||(5018019-5018058)
chr8 (14-129)||(4133077-4133191)
chr8 (23-123)||(9864161-9864262)
chr8 (17-123)||(11727037-11727144)
chr8 (89-128)||(23176763-23176802)
chr8 (81-128)||(24823407-24823454)
chr8 (89-128)||(35735984-35736023)
chr8 (88-129)||(41191018-41191059)
chr8 (87-128)||(41362526-41362567)
chr8 (13-76)||(1149698-1149762)
chr8 (89-129)||(4108912-4108952)
[»] chr1 (48 HSPs)
chr1 (13-128)||(15752034-15752150)
chr1 (3-129)||(32267038-32267165)
chr1 (13-129)||(10922731-10922848)
chr1 (13-128)||(1547292-1547408)
chr1 (13-108)||(51128884-51128980)
chr1 (13-128)||(28769658-28769773)
chr1 (13-128)||(30254429-30254544)
chr1 (13-128)||(10182063-10182179)
chr1 (13-128)||(15382938-15383054)
chr1 (13-128)||(3309153-3309268)
chr1 (13-125)||(8222139-8222249)
chr1 (13-127)||(28564836-28564951)
chr1 (17-128)||(18422656-18422768)
chr1 (13-128)||(19899824-19899940)
chr1 (40-128)||(30254863-30254951)
chr1 (13-124)||(30327007-30327119)
chr1 (13-124)||(238568-238679)
chr1 (15-128)||(2959753-2959867)
chr1 (13-126)||(47279196-47279310)
chr1 (13-129)||(23999351-23999468)
chr1 (23-127)||(37451292-37451397)
chr1 (12-128)||(37618948-37619067)
chr1 (13-125)||(16415653-16415767)
chr1 (13-124)||(27267254-27267364)
chr1 (13-129)||(27763366-27763481)
chr1 (17-128)||(34012436-34012548)
chr1 (13-98)||(32216090-32216176)
chr1 (13-129)||(47682549-47682665)
chr1 (23-125)||(14758049-14758152)
chr1 (23-124)||(21289674-21289783)
chr1 (13-128)||(27227540-27227648)
chr1 (78-125)||(31621674-31621721)
chr1 (89-128)||(42663785-42663824)
chr1 (89-128)||(43579251-43579290)
chr1 (23-128)||(41926168-41926274)
chr1 (81-129)||(7079198-7079246)
chr1 (13-128)||(42721044-42721160)
chr1 (92-128)||(47279168-47279204)
chr1 (73-128)||(22170759-22170814)
chr1 (24-125)||(27563971-27564074)
chr1 (73-128)||(38823219-38823274)
chr1 (23-128)||(48620642-48620748)
chr1 (26-118)||(9903122-9903215)
chr1 (13-46)||(25160720-25160753)
chr1 (88-129)||(26970269-26970310)
chr1 (64-105)||(46931439-46931480)
chr1 (89-121)||(3120890-3120922)
chr1 (73-125)||(39393391-39393443)
[»] chr2 (32 HSPs)
chr2 (13-125)||(33551064-33551177)
chr2 (13-128)||(11366459-11366575)
chr2 (13-128)||(2325448-2325564)
chr2 (13-128)||(17071815-17071931)
chr2 (13-128)||(29242216-29242332)
chr2 (13-128)||(37905718-37905833)
chr2 (24-129)||(26357585-26357691)
chr2 (17-128)||(17054178-17054290)
chr2 (13-128)||(4166931-4167047)
chr2 (13-128)||(33660446-33660562)
chr2 (13-104)||(43648323-43648415)
chr2 (23-128)||(43770927-43771032)
chr2 (13-129)||(19424706-19424823)
chr2 (13-128)||(4264155-4264271)
chr2 (25-128)||(35958918-35959022)
chr2 (13-128)||(41463928-41464044)
chr2 (13-128)||(36641995-36642111)
chr2 (73-128)||(13711473-13711528)
chr2 (73-128)||(19313861-19313916)
chr2 (82-128)||(41465518-41465564)
chr2 (13-124)||(4478381-4478494)
chr2 (83-128)||(31861904-31861949)
chr2 (13-128)||(33902077-33902191)
chr2 (13-128)||(3176948-3177064)
chr2 (28-111)||(19289416-19289500)
chr2 (89-128)||(41643881-41643920)
chr2 (90-128)||(43446463-43446501)
chr2 (73-126)||(18494407-18494460)
chr2 (92-129)||(39788580-39788617)
chr2 (89-129)||(18514771-18514811)
chr2 (89-129)||(19093421-19093461)
chr2 (23-129)||(27350026-27350134)
[»] chr3 (39 HSPs)
chr3 (13-128)||(51213041-51213157)
chr3 (17-128)||(40552323-40552435)
chr3 (13-129)||(3655262-3655379)
chr3 (13-128)||(48354941-48355057)
chr3 (23-128)||(46297832-46297938)
chr3 (13-128)||(37157708-37157823)
chr3 (13-128)||(37203067-37203183)
chr3 (13-128)||(4761709-4761827)
chr3 (24-129)||(20373367-20373473)
chr3 (23-127)||(29099356-29099461)
chr3 (13-129)||(47481521-47481638)
chr3 (13-128)||(26941320-26941436)
chr3 (13-128)||(7327542-7327659)
chr3 (13-128)||(4015460-4015576)
chr3 (13-122)||(11357424-11357535)
chr3 (13-128)||(35844326-35844442)
chr3 (13-125)||(52040982-52041096)
chr3 (89-128)||(38392628-38392667)
chr3 (58-113)||(54505823-54505878)
chr3 (87-128)||(11835741-11835782)
chr3 (26-125)||(22446138-22446238)
chr3 (27-128)||(32373472-32373572)
chr3 (23-123)||(34132940-34133041)
chr3 (13-128)||(22450968-22451084)
chr3 (73-129)||(45174502-45174558)
chr3 (13-97)||(53176086-53176170)
chr3 (89-128)||(23165838-23165877)
chr3 (23-125)||(24489032-24489135)
chr3 (89-128)||(40640634-40640673)
chr3 (13-91)||(42506135-42506214)
chr3 (89-128)||(49359628-49359667)
chr3 (58-129)||(54828807-54828877)
chr3 (55-125)||(44891510-44891579)
chr3 (87-128)||(21193606-21193647)
chr3 (100-129)||(43976033-43976062)
chr3 (13-128)||(27480439-27480555)
chr3 (89-125)||(32180747-32180783)
chr3 (13-128)||(44186561-44186677)
chr3 (89-129)||(53818509-53818549)
[»] chr7 (37 HSPs)
chr7 (13-128)||(5657542-5657658)
chr7 (13-128)||(24211725-24211841)
chr7 (13-128)||(18797313-18797427)
chr7 (13-128)||(32821114-32821230)
chr7 (23-128)||(37109856-37109962)
chr7 (13-125)||(7334781-7334894)
chr7 (23-128)||(17842657-17842763)
chr7 (13-128)||(30055510-30055627)
chr7 (13-125)||(38258532-38258645)
chr7 (23-128)||(43686025-43686130)
chr7 (13-128)||(31579125-31579246)
chr7 (13-128)||(8861269-8861385)
chr7 (13-128)||(26524388-26524504)
chr7 (13-128)||(27283728-27283844)
chr7 (13-128)||(10481587-10481705)
chr7 (23-128)||(27421450-27421556)
chr7 (13-129)||(37347005-37347122)
chr7 (13-128)||(33688323-33688438)
chr7 (13-123)||(22687228-22687339)
chr7 (55-128)||(12390734-12390807)
chr7 (73-129)||(25691667-25691723)
chr7 (23-129)||(31520794-31520901)
chr7 (15-105)||(38053493-38053584)
chr7 (68-129)||(9355943-9356004)
chr7 (26-126)||(23111176-23111277)
chr7 (68-129)||(48928680-48928741)
chr7 (13-125)||(21991623-21991736)
chr7 (13-128)||(44413440-44413557)
chr7 (13-128)||(4582903-4583019)
chr7 (13-112)||(29173540-29173640)
chr7 (73-128)||(6546503-6546558)
chr7 (22-128)||(10359284-10359391)
chr7 (78-128)||(15612885-15612935)
chr7 (68-121)||(48928413-48928466)
chr7 (92-128)||(241024-241060)
chr7 (23-110)||(26980325-26980413)
chr7 (13-128)||(34362210-34362325)
[»] chr4 (47 HSPs)
chr4 (13-128)||(25184122-25184238)
chr4 (17-121)||(19440738-19440843)
chr4 (13-128)||(6864044-6864160)
chr4 (13-129)||(25701143-25701260)
chr4 (25-128)||(34361589-34361693)
chr4 (13-128)||(47253758-47253873)
chr4 (13-128)||(55477977-55478097)
chr4 (13-128)||(29584286-29584400)
chr4 (13-128)||(27396625-27396741)
chr4 (58-124)||(4396339-4396405)
chr4 (58-128)||(32912712-32912782)
chr4 (13-125)||(49375978-49376092)
chr4 (13-125)||(879634-879747)
chr4 (28-128)||(35021136-35021237)
chr4 (13-128)||(37663827-37663941)
chr4 (13-128)||(19089539-19089655)
chr4 (17-129)||(34948187-34948300)
chr4 (20-128)||(39397927-39398036)
chr4 (13-128)||(17167722-17167838)
chr4 (13-128)||(17173299-17173415)
chr4 (13-128)||(28003072-28003188)
chr4 (26-125)||(50697254-50697354)
chr4 (13-128)||(55241190-55241306)
chr4 (23-129)||(4598001-4598107)
chr4 (23-128)||(3042620-3042726)
chr4 (23-128)||(38011863-38011969)
chr4 (79-129)||(52516605-52516655)
chr4 (71-128)||(9139256-9139313)
chr4 (17-128)||(37287742-37287855)
chr4 (13-128)||(36493774-36493890)
chr4 (64-128)||(42199738-42199802)
chr4 (58-128)||(53124296-53124366)
chr4 (13-121)||(7703533-7703642)
chr4 (33-128)||(4205125-4205221)
chr4 (88-128)||(20097490-20097530)
chr4 (13-128)||(30002710-30002826)
chr4 (73-129)||(32579452-32579508)
chr4 (89-128)||(2266856-2266895)
chr4 (73-128)||(7152253-7152308)
chr4 (73-128)||(17272020-17272075)
chr4 (89-128)||(17612344-17612383)
chr4 (27-125)||(37775681-37775780)
chr4 (89-128)||(38812260-38812299)
chr4 (67-124)||(46884175-46884232)
chr4 (89-129)||(2704520-2704560)
chr4 (13-120)||(23761089-23761197)
chr4 (88-128)||(47073656-47073696)
[»] scaffold0291 (1 HSPs)
scaffold0291 (13-128)||(7896-8012)
[»] scaffold0022 (1 HSPs)
scaffold0022 (13-125)||(146076-146189)
[»] chr6 (17 HSPs)
chr6 (13-125)||(5627403-5627516)
chr6 (26-128)||(4318895-4318998)
chr6 (13-125)||(1945845-1945959)
chr6 (13-129)||(7055274-7055391)
chr6 (13-128)||(30353417-30353533)
chr6 (13-128)||(20768095-20768209)
chr6 (23-128)||(8513242-8513348)
chr6 (13-124)||(18498446-18498559)
chr6 (13-125)||(21017171-21017284)
chr6 (17-129)||(29182171-29182284)
chr6 (13-128)||(3879998-3880114)
chr6 (13-121)||(15491631-15491740)
chr6 (24-124)||(6091253-6091353)
chr6 (13-128)||(6088917-6089033)
chr6 (13-128)||(7235094-7235209)
chr6 (73-128)||(33893122-33893177)
chr6 (88-128)||(24662189-24662229)
[»] scaffold0002 (2 HSPs)
scaffold0002 (13-128)||(143-259)
scaffold0002 (28-116)||(94458-94547)
[»] scaffold0061 (1 HSPs)
scaffold0061 (13-128)||(43966-44082)
[»] scaffold0017 (1 HSPs)
scaffold0017 (13-128)||(154705-154821)
[»] scaffold0009 (2 HSPs)
scaffold0009 (72-128)||(100830-100886)
scaffold0009 (73-129)||(42356-42412)


Alignment Details
Target: chr5 (Bit Score: 121; Significance: 5e-62; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 43308702 - 43308921
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcact-aaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  43308702 atactatgaggactgaacttttgatgccattgtacgaacagtgggtgttattcattacatttttgatgttataatgttaactttactaaaaaaagtcatt 43308801  T
Q  112 ctcatgacttcaccataacnnnnnnnnnnnnnnngggattctgatgaatgaattgaataattatcacaattttttatcagatgaatttactatgg-gtgg 210  Q
    ||||||||||||||||||                 ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  43308802 ctcatgacttcaccataa--tttttttttttttttggattctgatgaatgaattgaataattatcacaattttttatcagaaaaatttactatggagtgg 43308899  T
Q  211 tagttctcatgaaagtaagtga 232  Q
    ||||||||||||||||||||||    
T  43308900 tagttctcatgaaagtaagtga 43308921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 5112363 - 5112480
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  ||||||||||||||||||| ||||  ||||||||  ||||| ||| || ||||||||||||||| | |||||||||| ||||||||||||    
T  5112363 atactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcatt 5112462  T
Q  112 ctcatgacttcaccataa 129  Q
     |||||||||||||||||    
T  5112463 ttcatgacttcaccataa 5112480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 14919578 - 14919695
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttca-ctaaaaaagtcat 110  Q
    ||||||||| |||||||||||||||| |||| ||  ||||||| | ||||| ||||||||||||| |||||||||||||||||||| | |||||| | ||    
T  14919578 atactatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaacttcatcaaaaaaaataat 14919677  T
Q  111 tctcatgacttcaccata 128  Q
    ||||||||||||||||||    
T  14919678 tctcatgacttcaccata 14919695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 24886229 - 24886110
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcac--taaaaaagtca 109  Q
    ||||||||| |||||||||||||||| |||||||  ||||||||  ||||| ||||||||||||| |||||||| | ||||||||||   ||||||||||    
T  24886229 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaacttcaccaaaaaaaagtca 24886130  T
Q  110 ttctcatgacttcaccataa 129  Q
    ||||||||| ||||||||||    
T  24886129 ttctcatgatttcaccataa 24886110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 35826533 - 35826649
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || ||||  |||| || | ||||| ||| ||||||||| |||||||| | |||||||||| ||||||||||||    
T  35826533 atactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtcatt 35826632  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  35826633 atcatgacttcaccata 35826649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 22255296 - 22255193
Alignment:
Q  24 actgaacttttgatgccattgtaagaacagtgga-tgttattcattacatttttt-atgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||||||||||  ||| ||||  ||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||| | |||||||    
T  22255296 actgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgttaacttcaccaaaaaagttatttttatgactt 22255197  T
Q  122 cacc 125  Q
    ||||    
T  22255196 cacc 22255193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 22974145 - 22974248
Alignment:
Q  26 tgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    |||||||||||||  ||||||  |||||||| |||||| ||||||| ||||| |||||||| |||||||||||| |||||| |||||||||| |||||||    
T  22974145 tgaacttttgatgttattgtacaaacagtgggatgttactcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcac 22974244  T
Q  125 cata 128  Q
    ||||    
T  22974245 cata 22974248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 8741936 - 8742053
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga--tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    |||||||| |||||||||||||||||||||||||  |||| |||   ||||| |||  ||| |||| ||| |||| |||||||||||| | |||||||||    
T  8741936 atactatggagactgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcat 8742035  T
Q  111 tctcatgacttcaccata 128  Q
    ||||||||||||||||||    
T  8742036 tctcatgacttcaccata 8742053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 27330429 - 27330315
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||||||||||||||||||||||||||  ||||||  | ||||| |||  ||| |||| |||||||| |||||||||||| | ||||||||||    
T  27330429 atactatgaagactgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcatt 27330332  T
Q  112 ctcatgacttcaccata 128  Q
    | || ||||||||||||    
T  27330331 cccacgacttcaccata 27330315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 1429195 - 1429311
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| |||||||| ||||||||||| ||||  ||||||||  ||||| ||| || |||||| ||| |||| |||||||||||| |||| |||||||    
T  1429195 atactatggagactgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcatt 1429294  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  1429295 ttcatgacttcaccata 1429311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 39572944 - 39572828
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||  ||||||||||||||| || || |  ||||||||| ||||| |||  ||||||||||| ||||| | ||||||| |||| ||||||||||    
T  39572944 atactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaacttaactagaaaagtcatt 39572845  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  39572844 ctcatgacttcaccata 39572828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 27318552 - 27318650
Alignment:
Q  28 aacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    ||||||||||| |||||||  ||||||||  ||||| ||| ||||||||||||||| || |||||||||||| | |||| |||||||||||||||||||    
T  27318552 aacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcacc 27318650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 699271 - 699158
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| |||||||||||||||| || ||||  ||||||||  ||||| ||| || |||||||||| |||| |||||||||||  | ||||||||||||||    
T  699271 tatgatgactgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctca 699172  T
Q  116 tgacttcaccataa 129  Q
    | ||||||||||||    
T  699171 taacttcaccataa 699158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 7693355 - 7693239
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||| || || |||||||||||||||| ||||  |||||||| |||||| |||  ||| |||| |||||||| |||||||||||| | ||||||||||    
T  7693355 atactaagaggattgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcatt 7693256  T
Q  112 ctcatgacttcaccata 128  Q
     | ||||||||||||||    
T  7693255 ttaatgacttcaccata 7693239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 23116272 - 23116388
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| | |||||||||||||| ||| ||||  ||||||||  || || ||| |||| |||| ||||||||||||||||||||  ||||||||||||    
T  23116272 atactatgtaaactgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaacttcataaaaaaagtcatt 23116371  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||| ||||||||    
T  23116372 ttcatgacgtcaccata 23116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 17158094 - 17158199
Alignment:
Q  27 gaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaag---tcattctcatgacttc 122  Q
    |||||||||||| |||||||  ||| ||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||    ||||| | ||||||||    
T  17158094 gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaacttcacaaaaaaaaaaatcatttttatgacttc 17158193  T
Q  123 accata 128  Q
    ||||||    
T  17158194 accata 17158199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 31705671 - 31705777
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||| |||||||||| |||||||  ||| || || ||||| || |||||||||| |||||||| |||||||||||| |||||| ||||| | |||||||    
T  31705671 gactggacttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgactt 31705770  T
Q  122 caccata 128  Q
    |||||||    
T  31705771 caccata 31705777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 40133500 - 40133394
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||||||||||||||||||||  || |||||  ||||| |||  |||||||| ||  ||||||||||||||||| | |||||||||| || ||||||    
T  40133500 gactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcgtgactt 40133401  T
Q  122 caccata 128  Q
    |||||||    
T  40133400 caccata 40133394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 5830026 - 5829909
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgtta----taatgttaacttcactaaaaaagt 107  Q
    ||||||||| |||| ||||||||||| |||||||  ||| || || ||||| ||||||||||||||||||||    ||||||||||||||| |||||| |    
T  5830026 atactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgttaattataatgttaacttcaccaaaaaaat 5829927  T
Q  108 cattctcatgacttcacc 125  Q
    |||| | | |||||||||    
T  5829926 catttttacgacttcacc 5829909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 14409377 - 14409492
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||||||  |||  || |||||  || || ||| ||||||||| |||||||| |||| ||||||| | |||| |||||    
T  14409377 atactatga-gactgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttatagtgttgacttcaccagaaaaatcatt 14409475  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  14409476 ctcatgacttcaccata 14409492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 35511531 - 35511643
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| |||||||||||||||| || | ||  ||||||||| ||||| ||| |||| | || ||||||||||||||||||||  | ||| |||||| |||    
T  35511531 tatgatgactgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttca 35511630  T
Q  116 tgacttcaccata 128  Q
    |||||||||||||    
T  35511631 tgacttcaccata 35511643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 36860548 - 36860432
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| |||||||  ||||||||  ||||| |||  |||||||||||  |||| |||||||||||| | |||| |||||    
T  36860548 atactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcatt 36860449  T
Q  112 ctcatgacttcaccata 128  Q
     || |||||||||||||    
T  36860448 ttcgtgacttcaccata 36860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 15724554 - 15724499
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  15724554 ttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccata 15724499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 30969374 - 30969485
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  || |||||  ||||| |||  ||| |||| |||||||| |||||||||||| | | || |||||    
T  30969374 atactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatcatt 30969473  T
Q  112 ctcatgacttca 123  Q
    ||||||||||||    
T  30969474 ctcatgacttca 30969485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 25500986 - 25501092
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||| ||||||||||| || ||||  ||||||| | |||||||||  ||| |||| ||| |||| ||||||||| || | ||||||||||||||||||||    
T  25500986 gacttaacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgactt 25501085  T
Q  122 caccata 128  Q
    |||||||    
T  25501086 caccata 25501092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 26317780 - 26317850
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| || ||| |||||| |||||||| |||||||||||| |||||||||||| ||||||||||| ||||    
T  26317780 tgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcata 26317850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 36866877 - 36866771
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||||||||||||||||||||  ||||||||  ||||| |||  | |||||| || ||||| |||||||||||| | |||| ||||| || ||||||    
T  36866877 gactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgactt 36866778  T
Q  122 caccata 128  Q
    |||||||    
T  36866777 caccata 36866771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 12910416 - 12910359
Alignment:
Q  71 attttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||| |||||||| | |||||||||| |||||||||||| ||||||||||||||||    
T  12910416 atttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccata 12910359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 13380544 - 13380503
Alignment:
Q  88 gttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  13380544 gttaacttcactagaaaagtcattctcatgacttcaccataa 13380503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 33908358 - 33908245
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||||||  |||  ||||||||| || || ||| |||| |||| ||| |||| |||| ||||||| | |||  |||||    
T  33908358 atactatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtgttgacttcaccagaaagttcatt 33908259  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  33908258 ctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 7208923 - 7209027
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttca-ctaaaaaagtcattctcatgact 120  Q
    |||||||||||||||| || ||||  ||| || || ||||| || || |||||||||||||| ||||||||||||| | |||||||||||| | ||||||    
T  7208923 gactgaacttttgatgtcaatgtacaaacggtagggtgttactcgttgcattttttatgttacaatgttaacttcaccaaaaaaagtcatttttatgact 7209022  T
Q  121 tcacc 125  Q
    |||||    
T  7209023 tcacc 7209027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 38528287 - 38528402
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || ||||  |||| |||  ||||| |||||||| |||| |||||||| |||||||||||  | ||||  ||||    
T  38528287 atactatga-gactgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccatt 38528385  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  38528386 ttcatgacttcaccata 38528402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 8466869 - 8466754
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||  || |||||||||||| ||| ||||  || || || |||||||||  ||| |||| |||||| | |||||||||||| | |||||||||||    
T  8466869 atactatggggattgaacttttgataccactgtacaaagagggggtgttattcacaacacttttgatgttacagtgttaacttcaccagaaaagtcattc 8466770  T
Q  113 tcatgacttcaccata 128  Q
    ||||||| ||| ||||    
T  8466769 tcatgacctcatcata 8466754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 19119923 - 19119868
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| ||| |||| |||||||||||| | |||||||||||||||||||||||||||    
T  19119923 ttttgatgctatagtgttaacttcaccacaaaagtcattctcatgacttcaccata 19119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 5837680 - 5837567
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| |||||||| |||||||| || ||||  ||||||||  ||||| |||  ||| |||| ||| |||| ||||| |||||| | ||||||||||    
T  5837680 atactatggagactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcatt 5837581  T
Q  112 ctcatgacttcacc 125  Q
    ||||||| ||||||    
T  5837580 ctcatgaattcacc 5837567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 16004483 - 16004543
Alignment:
Q  69 acattttttatgttataatgttaacttcactaaaaaagtc-attctcatgacttcaccata 128  Q
    |||||||| |||||||| |||||||||||| | ||||||| ||||||||||||| ||||||    
T  16004483 acatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccata 16004543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 31786752 - 31786808
Alignment:
Q  68 tacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    ||||||||| ||| |||| |||||||||||| ||||||||||||||||  |||||||    
T  31786752 tacatttttcatgctatagtgttaacttcaccaaaaaagtcattctcactacttcac 31786808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 8437086 - 8436979
Alignment:
Q  18 atgaagactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcat 116  Q
    |||| |||||||||||||||| || ||||  |||| ||| |||||| ||| |||| |||  | | |||| |||||| ||||| |||||| ||||||||||    
T  8437086 atgaggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcat 8436987  T
Q  117 gacttcac 124  Q
    ||||||||    
T  8436986 gacttcac 8436979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 13956441 - 13956508
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    ||||| ||| |||| |||| |||||||| |||||||||||  | |||||||||| |||||||||||||    
T  13956441 tgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcacc 13956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 5748478 - 5748436
Alignment:
Q  87 tgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  5748478 tgttaacttcaccaaaaaagtcattttcatgacttcatcataa 5748436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 32563264 - 32563158
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| || ||||   |||||||| ||||| |||  ||| |||| |||||||| |||||||||||  | |||| ||||| | |||||||    
T  32563264 gactgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgactt 32563165  T
Q  122 caccata 128  Q
    |||||||    
T  32563164 caccata 32563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 35504240 - 35504176
Alignment:
Q  67 ttacattttttatgttataatgt---taacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||||||||||||||||   ||||||||| |||||| ||||| | ||||||||| ||||    
T  35504240 ttacattttttatgttataatgttaataacttcaccaaaaaaatcatttttatgacttcaacata 35504176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 35933957 - 35933911
Alignment:
Q  82 tataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||||||  |||||| ||||||||||||||||||||||    
T  35933957 tatagtgttaacttcatcaaaaaaatcattctcatgacttcaccata 35933911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 9200358 - 9200241
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||| || |||| ||||||||||| || ||||  ||| ||||  ||||| |||  ||| |||| |||||||| |||||||||||| | |||||| |||    
T  9200358 atactaagaggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagttatt 9200259  T
Q  112 ctcatgacttcaccataa 129  Q
     | |||||||||||||||    
T  9200258 ttaatgacttcaccataa 9200241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 180
Target Start/End: Original strand, 43291863 - 43291896
Alignment:
Q  147 ggattctgatgaatgaattgaataattatcacaa 180  Q
    |||||| |||||||||||||||||||||||||||    
T  43291863 ggattcggatgaatgaattgaataattatcacaa 43291896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 26268199 - 26268087
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||| ||||||||||| ||  |||  ||||||||  ||||| |||  ||| |||| ||| |||| |||||||||||| | |||| |||||    
T  26268199 atactatgtggactaaacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcatt 26268100  T
Q  112 ctcatgacttcac 124  Q
    |||||||||||||    
T  26268099 ctcatgacttcac 26268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 36055874 - 36055914
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||||||||| | |||||||||||||||||| |||||||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataa 36055914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 10555268 - 10555381
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| || ||||||||||||| |||||||  ||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  10555268 atactatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatt 10555367  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  10555368 ctcatgacttcacc 10555381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 23854497 - 23854610
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| ||||| |  |||||| || ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  23854497 atactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatt 23854596  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  23854597 ctcatgacttcacc 23854610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 37970585 - 37970701
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | |||||||||||||| |||||||  ||||||||  ||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  37970585 atactatgagggctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcatt 37970684  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  37970685 ctcatgacttcaccata 37970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 1150171 - 1150287
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| | |||||  |||||||| |||||| ||||||||||||| ||||||||  ||||||||||| ||||||||||||    
T  1150171 atactatgatgactgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcatt 1150270  T
Q  112 ctcatgacttcaccata 128  Q
    || ||||||||||||||    
T  1150271 cttatgacttcaccata 1150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 43643661 - 43643777
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||||| |||||||| |||| |||||||  |||||| || ||||| ||||||||||||| |||||||| |||||||||||| |||| |||||||    
T  43643661 atactatgaagattgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcatt 43643760  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  43643761 ctcatgacttcaccata 43643777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 1205051 - 1204938
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  |||||||   ||||| ||| |||||||||||||||||| |||||||||||| | ||||||||||    
T  1205051 atactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaacttcaccagaaaagtcatt 1204952  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  1204951 ctcatgacttcacc 1204938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 30654649 - 30654766
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||| |||||||||||||| ||||  |  ||||||||  ||||| |||||||||||||||||||||| |||||||||||| |||||| ||| |    
T  30654649 atactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcact 30654748  T
Q  112 ctcatgacttcaccataa 129  Q
    || |||||||||||||||    
T  30654749 cttatgacttcaccataa 30654766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 7891073 - 7891130
Alignment:
Q  71 attttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  7891073 atttttgatgttatagtgttaacttcacaaaaaaagtcattctcatgacttcaccata 7891130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 5300012 - 5300128
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||| | ||||||||||||||||||| ||||  |||||| || || || | |  ||| |||| ||| |||| ||||||||||| |||||||||||||    
T  5300012 atactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagtgttaacttcattaaaaaagtcatt 5300111  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  5300112 ctcatgacttcaccata 5300128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 12876233 - 12876117
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  |||||| || ||||| |||  ||||||||||| ||||| |||||||||||  | ||||||||||    
T  12876233 atactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaacttcatcagaaaagtcatt 12876134  T
Q  112 ctcatgacttcaccata 128  Q
     || |||||| ||||||    
T  12876133 ttcgtgacttaaccata 12876117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 34895087 - 34894975
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| ||||||||||||||||||| | ||  ||||||||| ||||| ||| |||| | || |||||||| |||||||||||  | |||||||||| |||    
T  34895087 tatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttca 34894988  T
Q  116 tgacttcaccata 128  Q
    |||||||||||||    
T  34894987 tgacttcaccata 34894975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 38644102 - 38643986
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| |||||||||||||||||||| |  |  ||||||||  ||||| |||  ||| |||| |||||||| ||||||||| || ||||||||||||    
T  38644102 atactatggagactgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcatt 38644003  T
Q  112 ctcatgacttcaccata 128  Q
    ||||||| |||||||||    
T  38644002 ctcatgatttcaccata 38643986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 8803888 - 8803988
Alignment:
Q  25 ctgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttca 123  Q
    |||||||||||||| |||| ||  || |||||| ||||| ||||||||||||| |||||||| |||||||||||| |||||||||||    |||||||||    
T  8803888 ctgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttca 8803983  T
Q  124 ccata 128  Q
    |||||    
T  8803984 ccata 8803988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 6098584 - 6098700
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| || ||||  ||||||||  ||||| ||| || |||||| ||| |||| | |||||||||| |||||||| |||    
T  6098584 atactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttatt 6098683  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  6098684 ttcatgacttcaccata 6098700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 13307747 - 13307631
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| || ||||  || |||| | ||||| |||  ||| |||| |||||||| |||||||||||| | |||| |||||    
T  13307747 atactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaatcatt 13307648  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  13307647 ctcatgacttcaccata 13307631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 15009306 - 15009250
Alignment:
Q  72 ttttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccata 15009250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 27082904 - 27083020
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||| |||||| || |  ||||||||  ||||| ||| |||| |||| ||| |||| |||||||||||| | |||||||| |    
T  27082904 atactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcagt 27083003  T
Q  112 ctcatgacttcaccata 128  Q
    || ||||||||||||||    
T  27083004 ctgatgacttcaccata 27083020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 31933952 - 31934064
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||| | |||||||||||||||| |||||||  || |||||  ||||| |||||| |||||| || | ||| |||||||||||| |||||| |||||    
T  31933952 atactataatgactgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcatt 31934051  T
Q  112 ctcatgacttcac 124  Q
    ||||| |||||||    
T  31934052 ctcataacttcac 31934064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 36695032 - 36695148
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| |||||||  ||||||||  ||||| |||  |||||||| || ||||| |||||||||||  | ||||||||||    
T  36695032 atactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcatt 36695131  T
Q  112 ctcatgacttcaccata 128  Q
     || |||||||||||||    
T  36695132 ttcctgacttcaccata 36695148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 16446951 - 16447057
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||| |||||||||||||||| ||  ||||||||  ||||| ||| |||| |||| |||||||| ||||||||| |  | |||||||||| |||||||||    
T  16446951 gactaaacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgactt 16447050  T
Q  122 caccata 128  Q
    |||||||    
T  16447051 caccata 16447057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 16222987 - 16222874
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgt-tattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||| ||||     || ||| || ||||||||||||||| |||||| ||||| | ||||||||||    
T  16222987 atactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcaccagaaaagtcatt 16222888  T
Q  112 ctcatgacttcacc 125  Q
    ||||||| ||||||    
T  16222887 ctcatgatttcacc 16222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 35459823 - 35459880
Alignment:
Q  71 attttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||| ||||| | ||||||| || |||||||||||||||||||||||||||||    
T  35459823 attttttatattatagtattaactttacgaaaaaagtcattctcatgacttcaccata 35459880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 40862535 - 40862431
Alignment:
Q  22 agactgaacttttgatgccattgtaagaacagt-ggatgttattcattacatttttt-atgttataatgttaacttcactaaaaaagtcattctcatgac 119  Q
    |||||||||||||||||||||||||  |||||| || ||||| |||  ||||||||| || ||||| |||||||||||| | |||||| ||| || ||||    
T  40862535 agactgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaagttattttcgtgac 40862436  T
Q  120 ttcac 124  Q
    |||||    
T  40862435 ttcac 40862431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 465956 - 465849
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||| ||||||||||| ||||  ||||||||  ||||| |||  ||| |||| |||||||  |||||||||||| | |||||||||| | |||||||    
T  465956 gactgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgactt 465857  T
Q  122 caccataa 129  Q
    ||||||||    
T  465856 caccataa 465849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 5018058 - 5018019
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  5018058 ttaacttcactaaaaaagtcattatcatgacttcaccata 5018019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 4133077 - 4133191
Alignment:
Q  14 tactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    |||||||| ||||||||||||||||||| ||||  ||||||  | | ||| ||| ||  ||||||||| ||   |||||||||||| |||||||||||||    
T  4133077 tactatgaggactgaacttttgatgccactgtacaaacagtcaggtattactcactatcttttttatgctag--tgttaacttcaccaaaaaagtcattc 4133174  T
Q  113 tcatgacttcaccataa 129  Q
    | ||||||| |||||||    
T  4133175 tgatgacttgaccataa 4133191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 9864262 - 9864161
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||  |||||||| ||  |||| |||||| ||||| |||||||||||| || ||||||    
T  9864262 gactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcgtgactt 9864163  T
Q  122 ca 123  Q
    ||    
T  9864162 ca 9864161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 11727144 - 11727037
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| ||||||||||||||||||| | ||  || |||||  ||||| | |  ||| |||| |||||||| |||||||||||| |||||| |||||||||    
T  11727144 tatgaggactgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattctca 11727045  T
Q  116 tgacttca 123  Q
    | ||||||    
T  11727044 taacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 23176763 - 23176802
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  23176763 ttaacttcaccaaaaaagtcattttcatgacttcaccata 23176802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 24823407 - 24823454
Alignment:
Q  81 ttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| |||||||||||| ||||||||||||||||| |||| ||||||    
T  24823407 ttatagtgttaacttcaccaaaaaagtcattctcataactttaccata 24823454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 35735984 - 35736023
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccata 35736023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 41191018 - 41191059
Alignment:
Q  88 gttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||||||| |||||||||||| |||| ||||||||||||    
T  41191018 gttaacttcaccaaaaaagtcattttcataacttcaccataa 41191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 41362567 - 41362526
Alignment:
Q  87 tgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||||| |||||||||||| |||| |||||||||||    
T  41362567 tgttaacttcaccaaaaaagtcattttcataacttcaccata 41362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 1149698 - 1149762
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttt 76  Q
    ||||||||| ||| |||||||||||| |||||||  |||||| || ||||| |||||||||||||    
T  1149698 atactatgaggacagaacttttgatgtcattgtacaaacagtgggttgttactcattacattttt 1149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 4108912 - 4108952
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||| || |||||||||||| |||||||||||||||||    
T  4108912 ttaactttaccaaaaaagtcattttcatgacttcaccataa 4108952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 15752150 - 15752034
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||||||||||  ||||||| | ||||| ||| || ||||||||||||||| |||||||||||| ||||||||||||    
T  15752150 atactatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtcatt 15752051  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  15752050 ctcatgacttcaccata 15752034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 32267165 - 32267038
Alignment:
Q  3 tgggtagattatactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaa 101  Q
    ||||| ||| ||| ||||| || ||||||||||||| |||||||  ||||||||  ||||| ||||||||||||| |||||||| |||||||||||| ||    
T  32267165 tgggttgatgataatatgaggagtgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaa 32267066  T
Q  102 aaaagtcattctcatgacttcaccataa 129  Q
    |||||||||||| |||||||||||||||    
T  32267065 aaaagtcattcttatgacttcaccataa 32267038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 10922848 - 10922731
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| || ||||||||||||| |||||||  ||||||||  | ||| |||||||||||||||||||||| |||||||||||| |||||| |||||    
T  10922848 atactatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatt 10922749  T
Q  112 ctcatgacttcaccataa 129  Q
    ||||||| ||||||||||    
T  10922748 ctcatgatttcaccataa 10922731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 1547408 - 1547292
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||  |||||||||||||||||| || |  ||||||||| ||||| |||  ||||||||||||||||| |||||||||||| | ||||||||||    
T  1547408 atactatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtcatt 1547309  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  1547308 ctcatgacttcaccata 1547292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 51128980 - 51128884
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtc 108  Q
    ||||||| | |||||||||||||||| |||||||  ||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  51128980 atactataatgactgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtc 51128884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 28769773 - 28769658
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||| ||| |||| |||||||||||||||  ||| |||| ||||| ||||||||||||| |||| ||| |||||||||||| |||||||| |||     
T  28769773 atactatgaggaccgaacctttgatgccattgtacaaacggtgggtgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttattt 28769674  T
Q  113 tcatgacttcaccata 128  Q
    | ||||||||||||||    
T  28769673 ttatgacttcaccata 28769658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 30254544 - 30254429
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||| ||| |||||||||||||||| |||||||  |||||||  | ||| ||||||||||||| |||||||| |||||||||||  |||||||||||||    
T  30254544 atactttgaggactgaacttttgatgtcattgtacaaacagtgtgtattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattc 30254445  T
Q  113 tcatgacttcaccata 128  Q
    | || |||||||||||    
T  30254444 ttataacttcaccata 30254429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 10182063 - 10182179
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||||  |||||  || || ||||||||||||| | | |||||||||| ||||||||||||    
T  10182063 atactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcatt 10182162  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  10182163 ttcatgacttcaccata 10182179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 15383054 - 15382938
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||| || |||||||||||||||| |||||||  ||| |||| |||||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||    
T  15383054 atactacgatgactgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatt 15382955  T
Q  112 ctcatgacttcaccata 128  Q
     | || |||||||||||    
T  15382954 tttataacttcaccata 15382938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 3309268 - 3309153
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    |||||||||||| |||||||||||| ||| ||||  |||||||| ||||| |||  ||| |||| |||||||| ||||||||| || | |||||||||||    
T  3309268 atactatgaagattgaacttttgataccactgtacaaacagtgggtgttactcacaacacttttgatgttatagtgttaactttaccagaaaagtcattc 3309169  T
Q  113 tcatgacttcaccata 128  Q
    ||||||||| ||||||    
T  3309168 tcatgactttaccata 3309153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 8222249 - 8222139
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||  ||||||||||||||||||||||||   | ||| | ||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  8222249 atactatgagaactgaacttttgatgccattgtaa---cggtgtggtgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtcatt 8222153  T
Q  112 ctcatgacttcacc 125  Q
     | |||||||||||    
T  8222152 tttatgacttcacc 8222139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 28564836 - 28564951
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||||||  | ||||| ||||||||||||| |||||||| |||||||||||  |||||| |||||    
T  28564836 atactatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaaaatcatt 28564935  T
Q  112 ctcatgacttcaccat 127  Q
     |||| ||||||||||    
T  28564936 ttcataacttcaccat 28564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 18422768 - 18422656
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| |||||||||||||||| |||||||  ||| ||||  ||||| || ||| |||||| |||||||| |||||||||||| |||||||||||| | |    
T  18422768 tatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttta 18422669  T
Q  116 tgacttcaccata 128  Q
    |||||||||||||    
T  18422668 tgacttcaccata 18422656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 19899824 - 19899940
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |  |||||||||||||||||| ||  ||||||| | ||||| || |||||||||| |||||||| |||||||||||| |||||| |||||    
T  19899824 atactatgagggttgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatt 19899923  T
Q  112 ctcatgacttcaccata 128  Q
     | ||||||||||||||    
T  19899924 attatgacttcaccata 19899940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 30254951 - 30254863
Alignment:
Q  40 cattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||  |||||||| |||||| |||||||||||| |||||||| |||||||||||  |||||||||||| | ||||||||||||||    
T  30254951 cattgtacaaacagtgggtgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccata 30254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 30327007 - 30327119
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||| ||||||  ||| || || | ||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||    
T  30327007 atactatgatgactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaaattcacaaaaaaagtcatt 30327106  T
Q  112 ctcatgacttcac 124  Q
     | ||||||||||    
T  30327107 tttatgacttcac 30327119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 238568 - 238679
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||  |||||||||||||||| |||||||  |||||||||||||| |||  |||||||| ||  |||| |||||||||||| |||||||| |||     
T  238568 atactatggggactgaacttttgatgtcattgtacaaacagtggatgttactcacaacatttttaatactatagtgttaacttcaccaaaaaagttattt 238667  T
Q  113 tcatgacttcac 124  Q
    || |||||||||    
T  238668 tcgtgacttcac 238679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 2959867 - 2959753
Alignment:
Q  15 actatgaagactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattct 113  Q
    ||||||| |||||||||||||||| || ||||  |||||||| |||||| | | |||| |||| |||||||| |||||||||||  | |||||||||| |    
T  2959867 actatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcatttt 2959768  T
Q  114 catgacttcaccata 128  Q
    |||||||||||||||    
T  2959767 catgacttcaccata 2959753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 47279310 - 47279196
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||| ||||||| ||||  ||||||||  ||||| |||  ||| |||| ||  ||||||||||||||||| |||||| |||||    
T  47279310 atactatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcatt 47279211  T
Q  112 ctcatgacttcacca 126  Q
    |||||||||||||||    
T  47279210 ctcatgacttcacca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 23999468 - 23999351
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | |||||||||||||| |||| ||  || |||||  ||||| || ||| |||||||||||| || |||||||||||| |||||| |||||    
T  23999468 atactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaatcatt 23999369  T
Q  112 ctcatgacttcaccataa 129  Q
    || |||||||||||||||    
T  23999368 cttatgacttcaccataa 23999351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 37451397 - 37451292
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| |||||||  ||| || || ||||| | ||||||||||| |||||||| ||||||||| || |||||||||||| | |||||||    
T  37451397 gactgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaactttaccaaaaaagtcatttttatgactt 37451298  T
Q  122 caccat 127  Q
    ||||||    
T  37451297 caccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 37618948 - 37619067
Alignment:
Q  12 tatactatgaagactgaacttttgatgccattgtaagaacagtgga---tgttattcattacattttttatgttataatgttaacttcactaaaaaagtc 108  Q
    ||||||||||  ||||||||||||||| |||| ||  ||||||||    | ||| |||||| |||||| |||||||| |||||||||||| |||||||||    
T  37618948 tatactatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtc 37619047  T
Q  109 attctcatgacttcaccata 128  Q
    ||||| || |||||||||||    
T  37619048 attcttataacttcaccata 37619067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 16415767 - 16415653
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt--ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    ||||||||| | ||||||||||||||||| ||||  |||| |  || ||||| ||| |||| |||| ||| |||| |||||||||||| | |||||||||    
T  16415767 atactatgatggctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcat 16415668  T
Q  111 tctcatgacttcacc 125  Q
    |||||||||||||||    
T  16415667 tctcatgacttcacc 16415653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 27267254 - 27267364
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| ||||||||||||| |||||| ||||  ||||||||  ||| | ||| ||||||||||||| ||   |||||||||||| |||||| |||||    
T  27267254 atactatggagactgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttttatgctag--tgttaacttcaccaaaaaaatcatt 27267351  T
Q  112 ctcatgacttcac 124  Q
    |||||||||||||    
T  27267352 ctcatgacttcac 27267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 27763366 - 27763481
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||| | ||| |||||||||| |||| ||  |||  ||| ||||| ||||||||||||| |||||||| |||||||||||| |||||| ||||||    
T  27763366 atactatgagggctggacttttgatgtcattctacaaactatgggtgttactcattacatttttgatgttatagtgttaacttcac-aaaaaaatcattc 27763464  T
Q  113 tcatgacttcaccataa 129  Q
    | || |||| |||||||    
T  27763465 ttataactttaccataa 27763481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 34012436 - 34012548
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| ||||||||||||||||||| | ||  ||||||||| ||||| ||| |||| | || |||||||| |||||||||||  | ||| |||||| |||    
T  34012436 tatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttca 34012535  T
Q  116 tgacttcaccata 128  Q
    |||||||||||||    
T  34012536 tgacttcaccata 34012548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 32216176 - 32216090
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcac 98  Q
    |||||| || |||||||||||||| |||||||||  ||||||||  ||||| ||| ||||||||| |||||||| ||||||||||||    
T  32216176 atactacgaggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttcac 32216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 47682549 - 47682665
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga--tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    ||||||||| || |||||||||||| ||| ||||  | ||||||   ||||| |||  |||||||||||| ||   |||||||||||| ||||||||||     
T  47682549 atactatgaggaatgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgctag--tgttaacttcaccaaaaaagtcac 47682646  T
Q  111 tctcatgacttcaccataa 129  Q
    |||||||||||||||||||    
T  47682647 tctcatgacttcaccataa 47682665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 14758152 - 14758049
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||||||  |||  |||||| |  || || ||| |||| |||| |||||||| |||| ||||||| | ||||||||||||||||||||    
T  14758152 gactgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgactt 14758053  T
Q  122 cacc 125  Q
    ||||    
T  14758052 cacc 14758049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 21289783 - 21289674
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttat-------gttataatgttaacttcactaaaaaagtcattctc 114  Q
    ||||||||||||||||||| ||||  ||||||||  ||||| ||| ||||||||||||       | |||| |||||||||||| | |||||||||||||    
T  21289783 gactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatgatatagtgttaacttcaccagaaaagtcattctc 21289684  T
Q  115 atgacttcac 124  Q
    ||||||||||    
T  21289683 atgacttcac 21289674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 27227540 - 27227648
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||| | || | |    |||||||||||| ||   |||||||||||| |||||| ||||||    
T  27227540 atactatgaggactgaacttttgatgccactgtacaaacagtg-aggtgagt----acattttttatgctag--tgttaacttcaccaaaaaaatcattc 27227632  T
Q  113 tcatgacttcaccata 128  Q
    ||||||||||||||||    
T  27227633 tcatgacttcaccata 27227648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 31621674 - 31621721
Alignment:
Q  78 atgttataatgttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  31621674 atgttatagtgttgacttcactagaaaagtcattctcatgacttcacc 31621721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 42663785 - 42663824
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  42663785 ttaacttcactaaaaaagtcattatcatgacttcaccata 42663824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 43579290 - 43579251
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccata 43579251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 41926274 - 41926168
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||| |||||||| ||||  |||||||| || ||| ||| || |||||| |||||||| | |||||||||  |||||| ||||| |||| ||||    
T  41926274 gactgaacttgtgatgccactgtacaaacagtgggatattactcactatatttttgatgttatagtattaacttcatcaaaaaaatcattttcataactt 41926175  T
Q  122 caccata 128  Q
    |||||||    
T  41926174 caccata 41926168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 7079198 - 7079246
Alignment:
Q  81 ttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||| |||||||||||| |||||||||||| ||||||||| |||||||    
T  7079198 ttatagtgttaacttcaccaaaaaagtcattatcatgactttaccataa 7079246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 42721160 - 42721044
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  || |||||||||||||  | ||||  ||||||||  ||||| ||| || |||||||||| ||||  | ||||||||| |||||| |||||    
T  42721160 atactatggggattgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcatt 42721061  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  42721060 ttcatgacttcaccata 42721044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 47279204 - 47279168
Alignment:
Q  92 acttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||| |||||||||||||||||||||||||||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccata 47279168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 22170814 - 22170759
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||| ||||||||||| || |||||||||| |||||| |||||||||    
T  22170814 ttttgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccata 22170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 27563971 - 27564074
Alignment:
Q  24 actgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcact-aaaaaagtcattctcatgactt 121  Q
    ||||||||||||||| || | ||  ||||||||| ||||| ||| || |||||| | |||||| ||||||||||||| |||||| ||||| |||| ||||    
T  27563971 actgaacttttgatgtcactatacaaacagtggagtgttactcactatatttttaaagttatagtgttaacttcactaaaaaaaatcattttcataactt 27564070  T
Q  122 cacc 125  Q
    ||||    
T  27564071 cacc 27564074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 38823274 - 38823219
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| ||| |||| ||||||||| || | |||||||||||||||||||||||||||    
T  38823274 ttttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcaccata 38823219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 48620748 - 48620642
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| || ||||  ||||||||  ||||| |||  ||| |||| |||||||| |||||||||||| | |||||||||| | || ||||    
T  48620748 gactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaacttcacaagaaaagtcattttaataactt 48620649  T
Q  122 caccata 128  Q
    || ||||    
T  48620648 caacata 48620642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 9903122 - 9903215
Alignment:
Q  26 tgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatga 118  Q
    ||||||||||||| || ||||  ||||| ||  ||||| ||| |||| |||| |||||||| |||||||||||  |||||||||||| ||||||    
T  9903122 tgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaacttcatcaaaaaagtcattttcatga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 25160753 - 25160720
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgta 46  Q
    ||||||||| ||||||||||||||||||||||||    
T  25160753 atactatgaggactgaacttttgatgccattgta 25160720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 26970310 - 26970269
Alignment:
Q  88 gttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||||||| |||||||||||| ||||||||| |||||||    
T  26970310 gttaacttcaccaaaaaagtcattatcatgactttaccataa 26970269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 46931480 - 46931439
Alignment:
Q  64 tcattacattttttatgttataatgttaacttcactaaaaaa 105  Q
    ||||||||||||| |||||||| |||||||||||| ||||||    
T  46931480 tcattacatttttgatgttatagtgttaacttcacaaaaaaa 46931439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 3120890 - 3120922
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||||||||||| ||||||||    
T  3120890 ttaacttcactaaaaaagtcattcgcatgactt 3120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 39393443 - 39393391
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    |||| ||| |||| ||||||||||| || ||||||||||||||| ||||||||    
T  39393443 ttttgatgctatagtgttaacttcattagaaaagtcattctcataacttcacc 39393391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 33551064 - 33551177
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||||| |||||||||||| |||||||  ||||||||  ||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  33551064 atactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcatt 33551163  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  33551164 ctcatgacttcacc 33551177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 11366459 - 11366575
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | |||||||||||||| |||| ||  || |||| ||||||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||    
T  11366459 atactatgagggctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatt 11366558  T
Q  112 ctcatgacttcaccata 128  Q
    || |||| |||||||||    
T  11366559 cttatgatttcaccata 11366575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 2325448 - 2325564
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||||| ||||  |||| |||  ||||| ||| ||||||| | |||||||| |||||||||||| | ||||||||||    
T  2325448 atactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtcatt 2325547  T
Q  112 ctcatgacttcaccata 128  Q
    | ||| |||||||||||    
T  2325548 cacataacttcaccata 2325564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 17071815 - 17071931
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||| || |||||||||||| |||||||  || | || ||||||| | | |||||||||  ||||||| |||||||||||| ||||||||||||    
T  17071815 atactatgaataccgaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttatagtgttaacttcaccaaaaaagtcatt 17071914  T
Q  112 ctcatgacttcaccata 128  Q
    | |||||||||||||||    
T  17071915 cgcatgacttcaccata 17071931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 29242216 - 29242332
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||||  |||||  || || ||||||||||||||| | |||||||||| ||||||  ||||    
T  29242216 atactatgaagactgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatagttttaacttcaccaaaaaaaccatt 29242315  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  29242316 ttcatgacttcaccata 29242332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 37905833 - 37905718
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||| ||||  ||||| || ||||||||||||||||||| |||||||||||| |||||| |||||    
T  37905833 atactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaacttcaccaaaaaa-tcatt 37905735  T
Q  112 ctcatgacttcaccata 128  Q
     | || |||||||||||    
T  37905734 tttataacttcaccata 37905718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 26357691 - 26357585
Alignment:
Q  24 actgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttc 122  Q
    ||||||||||||||| || ||||  |||||||| |||||| ||| |||| |||| |||||||| |||||||||||  | |||||||||| ||||||||||    
T  26357691 actgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttc 26357592  T
Q  123 accataa 129  Q
    |||||||    
T  26357591 accataa 26357585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 17054178 - 17054290
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    |||||| || | |||||||||| |||||||  |||| || ||||||| | | ||||||||| |||||||| | |||||||||| ||||||||||||| ||    
T  17054178 tatgaataccgnacttttgatgtcattgtacaaacaatgagatgttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgca 17054277  T
Q  116 tgacttcaccata 128  Q
    |||||||||||||    
T  17054278 tgacttcaccata 17054290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 4167047 - 4166931
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||  ||||| |||  | |||||| ||  ||||||||||||||||| | ||||||||||    
T  4167047 atactatggggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcatt 4166948  T
Q  112 ctcatgacttcaccata 128  Q
     || |||||||||||||    
T  4166947 ttcgtgacttcaccata 4166931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 33660446 - 33660562
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||| || ||||||||||||||||||| ||||  |||||| || ||||| |||  ||| |||| |||||||| ||||||||| |||| ||||||||||    
T  33660446 atactaagaggactgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcatt 33660545  T
Q  112 ctcatgacttcaccata 128  Q
     | ||||||||||||||    
T  33660546 ttaatgacttcaccata 33660562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 43648323 - 43648415
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaa 104  Q
    ||||||||| |||||||||||||||| |||| ||  ||||||| | ||||| ||||||||||||| |||||||| |||||||||||| |||||    
T  43648323 atactatgatgactgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaa 43648415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 43770927 - 43771032
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||||||||||||||| ||||  |||||| || ||||| |||  ||| |||| |||||||| |||||||||||| |||||| ||||||| |||||||    
T  43770927 gactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaa-tcattctaatgactt 43771025  T
Q  122 caccata 128  Q
    |||||||    
T  43771026 caccata 43771032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 19424706 - 19424823
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||| |||||||||||||| | ||  |||| |||  ||||| |||  ||| |||| |||||||| |||||||||||| | ||||| ||||    
T  19424706 atactatgaggactaaacttttgatgccactatataaacaatggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagccatt 19424805  T
Q  112 ctcatgacttcaccataa 129  Q
    ||||||||||||||||||    
T  19424806 ctcatgacttcaccataa 19424823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 4264155 - 4264271
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| ||||||||||||||||| || ||||  |||||||| |||||| |||  ||| |||| ||| |||| ||||||||| || | ||||||||||    
T  4264155 atactatggagactgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttaccagaaaagtcatt 4264254  T
Q  112 ctcatgacttcaccata 128  Q
     | ||||||||||||||    
T  4264255 atgatgacttcaccata 4264271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 35959022 - 35958918
Alignment:
Q  25 ctgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttca 123  Q
    |||||||||| ||| |||||||  ||||||||  ||||  |||||||||||||||||||||| ||  |||||||| |||||||||||| | |||||||||    
T  35959022 ctgaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttca 35958923  T
Q  124 ccata 128  Q
     ||||    
T  35958922 tcata 35958918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 41463928 - 41464044
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| || |||||||||||||||| ||||  ||||||| | ||||| |||  ||| |||| || ||||| | |||||||||| ||||| ||||||    
T  41463928 atactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaacttcaccaaaaatgtcatt 41464027  T
Q  112 ctcatgacttcaccata 128  Q
    |||| ||||||||||||    
T  41464028 ctcacgacttcaccata 41464044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 36642111 - 36641995
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || ||||  ||||||| | ||||| ||   ||| |||| ||| |||| | |||| ||||| | ||||||||||    
T  36642111 atactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaatttcaccagaaaagtcatt 36642012  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  36642011 ctcatgacttcaccata 36641995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 13711528 - 13711473
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| ||| ||||||||||||||||| | |||||||||||| ||||||||||||||    
T  13711528 ttttgatgctataatgttaacttcaccagaaaagtcattctgatgacttcaccata 13711473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 19313916 - 19313861
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| ||| ||||||||||||||||| | |||||||||||| ||||||||||||||    
T  19313916 ttttgatgctataatgttaacttcaccagaaaagtcattctaatgacttcaccata 19313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 41465564 - 41465518
Alignment:
Q  82 tataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||    
T  41465564 tatagtgttaacttcaccagaaaagtcattctcatgacttcaccata 41465518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 4478494 - 4478381
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||| |||||||||||||| ||||  |||| |||| ||||| |||  ||| |||| |||||||| |||||||||||| |||||  |||||    
T  4478494 atactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaatatcatt 4478395  T
Q  112 ctc-atgacttcac 124  Q
     || ||||||||||    
T  4478394 ttctatgacttcac 4478381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 31861949 - 31861904
Alignment:
Q  83 ataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||||    
T  31861949 ataatattaacttcaccaaaaaagtcattctcataacttcaccata 31861904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 33902191 - 33902077
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||| ||| |||||||||||||||| |||| ||  ||||||||  | ||| ||| ||||||||||||||||   |||||||||||| | ||||||||||    
T  33902191 atactttgaggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgttag--tgttaacttcaccagaaaagtcatt 33902094  T
Q  112 ctcatgacttcaccata 128  Q
    || | ||||||| ||||    
T  33902093 ctaacgacttcatcata 33902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 3177064 - 3176948
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacag-tggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||||| ||  ||||| |||  |||||||| || ||||| | |||||||||  | ||||||||||    
T  3177064 atactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtcatt 3176965  T
Q  112 ctcatgacttcaccata 128  Q
     || | |||||||||||    
T  3176964 ttcgtaacttcaccata 3176948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 19289416 - 19289500
Alignment:
Q  28 aacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||| |||||||  |||| |||  ||||| |||||| |||||| |||||||| |||||||||||  ||||||||||||    
T  19289416 aacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttatagtgttaacttcatcaaaaaagtcatt 19289500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 41643920 - 41643881
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccata 41643881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 43446463 - 43446501
Alignment:
Q  90 taacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccata 43446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 18494407 - 18494460
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacca 126  Q
    |||| ||| |||| |||||||||||| | |||||||||| ||||||||||||||    
T  18494407 ttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcacca 18494460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 39788580 - 39788617
Alignment:
Q  92 acttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataa 39788617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 18514771 - 18514811
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  18514771 ttaacttcatcaaaaaagtcattctcatgacttcactataa 18514811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 19093461 - 19093421
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||||||||| | |||| |||||||||||||||||||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataa 19093421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 27350026 - 27350134
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaa-gtcattctcatgact 120  Q
    |||||||||||||||| || ||||  ||||||| | ||||| |||  |||||||| ||| |||| |||||||||||| ||||||  | ||| | ||||||    
T  27350026 gactgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaacttcaccaaaaaatattattttaatgact 27350125  T
Q  121 tcaccataa 129  Q
    |||||||||    
T  27350126 tcaccataa 27350134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 51213041 - 51213157
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||| |||||||||||||||||||  ||||||||  ||||  |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  51213041 atactatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcatt 51213140  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  51213141 ctcatgacttcaccata 51213157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 40552323 - 40552435
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| |||||||||||||||| |||||||  ||| ||||| ||||| ||||||||||||| |||||||| |||||||||| | ||||||||||||||||    
T  40552323 tatgaggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctca 40552422  T
Q  116 tgacttcaccata 128  Q
    |||||||||||||    
T  40552423 tgacttcaccata 40552435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 3655262 - 3655379
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||| ||||  ||||| |||||||||||||||||||||| ||||||||| |  ||||||||||||    
T  3655262 atactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaactttatcaaaaaagtcatt 3655361  T
Q  112 ctcatgacttcaccataa 129  Q
     | |||||||||||||||    
T  3655362 tttatgacttcaccataa 3655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 48355057 - 48354941
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||  |||||||||||||||||||||||  |||| |||  ||||| ||||||||||||| || ||||| |||||||||||| | |||| |||||    
T  48355057 atactatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatcatt 48354958  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  48354957 ctcatgacttcaccata 48354941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 46297832 - 46297938
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||| |||||||||  ||||||||  ||||| ||| || |||||| |||||||| |||||||||||| | |||||||||| |||||||||    
T  46297832 gactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgactt 46297931  T
Q  122 caccata 128  Q
    |||||||    
T  46297932 caccata 46297938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 37157823 - 37157708
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||||  ||||| ||| |||| |||| |||||||| |||||||||||  ||||||| ||||    
T  37157823 atactatgatgactgaacttttgatgccactgtac-aacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccatt 37157725  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  37157724 ttcatgacttcaccata 37157708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 37203183 - 37203067
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||||| ||||  ||||||||  ||||| ||| |||| |||| |||||||| |||||||||||  |||||| |||||    
T  37203183 atactatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatt 37203084  T
Q  112 ctcatgacttcaccata 128  Q
     | ||||||||||||||    
T  37203083 tttatgacttcaccata 37203067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 4761709 - 4761827
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcac--taaaaaagtca 109  Q
    ||||||||| |||||||||||||||| |||||||  ||||||| | ||||| ||||||||||||| || ||||| | ||||||||||   ||||||||||    
T  4761709 atactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcaccaaaaaaaagtca 4761808  T
Q  110 ttctcatgacttcaccata 128  Q
     |||||||| |||||||||    
T  4761809 atctcatgaattcaccata 4761827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 20373367 - 20373473
Alignment:
Q  24 actgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttc 122  Q
    ||||||||||||||| |||||||  |||||| || ||||| || |||||||||| |||||||| | |||||||||| |||||| ||||||| ||||||||    
T  20373367 actgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgacttc 20373466  T
Q  123 accataa 129  Q
    || ||||    
T  20373467 actataa 20373473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 29099461 - 29099356
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||||||| |||| || ||||  ||||||||  ||||| |||  ||||||||||||||||| |||||||||||| | |||||||||||| |||||||    
T  29099461 gactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcattctaatgactt 29099362  T
Q  122 caccat 127  Q
    ||||||    
T  29099361 caccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 47481638 - 47481521
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | || ||||||||||| |||| ||  ||||||||  ||||| ||||||||||||| |||||||| |||||||||||| |||||  |||||    
T  47481638 atactatgagggctaaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcatt 47481539  T
Q  112 ctcatgacttcaccataa 129  Q
    |  |||||||||||||||    
T  47481538 cctatgacttcaccataa 47481521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 26941320 - 26941436
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||| |||| |||||||||||||||| |||| ||  ||||||||  ||||| |||||| | |||| || ||||| |||||||||||| |||||| |||||    
T  26941320 ataccatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaacttcaccaaaaaaatcatt 26941419  T
Q  112 ctcatgacttcaccata 128  Q
    || ||||||||||||||    
T  26941420 cttatgacttcaccata 26941436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 7327542 - 7327659
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgtt-aacttcactaaaaaagtcat 110  Q
    ||||||||  |||||||||||||||| || ||||  || | |||| ||||| |||  ||| |||| |||||||| |||| ||||||||||||||||||||    
T  7327542 atactatggggactgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagtgtttaacttcactaaaaaagtcat 7327641  T
Q  111 tctcatgacttcaccata 128  Q
    |||||| |||||||||||    
T  7327642 tctcataacttcaccata 7327659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 4015576 - 4015460
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || | ||  |||||| || ||||| |||  ||| |||| ||| |||| |||||||||||  | ||||||||||    
T  4015576 atactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaacttcatcagaaaagtcatt 4015477  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  4015476 ctcatgacttcaccata 4015460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 11357424 - 11357535
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga--tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    ||||||||| ||||||||||||||||| | ||||  ||||||||   ||||| ||| || | |||| ||| |||| |||||||||||| | |||||||||    
T  11357424 atactatgatgactgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcat 11357523  T
Q  111 tctcatgacttc 122  Q
    ||||||||||||    
T  11357524 tctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 35844442 - 35844326
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||| ||||||||||| || ||||  ||||||| | ||||| |||  ||||||||  ||||||| |||||||||||| | ||||||||||    
T  35844442 atactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaacttcaccagaaaagtcatt 35844343  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  35844342 atcatgacttcaccata 35844326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 52040982 - 52041096
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt--ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    ||||||||| ||||||||||||||||||| | ||  |||| |  ||  |||| ||| |||| |||| |||||||| | |||||||||| | |||||||||    
T  52040982 atactatgatgactgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcat 52041081  T
Q  111 tctcatgacttcacc 125  Q
    |||||||||||||||    
T  52041082 tctcatgacttcacc 52041096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 38392628 - 38392667
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccata 38392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 54505878 - 54505823
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattct 113  Q
    ||||| ||||||||||||| |||||||| |||||||||||  ||||||||||||||    
T  54505878 tgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtcattct 54505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 11835741 - 11835782
Alignment:
Q  87 tgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  11835741 tgttaacttcaccaaaaaaatcattctcatgacttcaccata 11835782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 22446138 - 22446238
Alignment:
Q  26 tgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttca-ctaaaaaagtcattctcatgacttca 123  Q
    |||||||||||||||| ||||  || |||||  ||||| ||| || |||||| ||| |||||||||||||||| | |||||||||||| |||||||||||    
T  22446138 tgaacttttgatgccactgtacaaa-agtggggtgttactcactatatttttgatgatataatgttaacttcaccaaaaaaagtcattttcatgacttca 22446236  T
Q  124 cc 125  Q
    ||    
T  22446237 cc 22446238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 32373572 - 32373472
Alignment:
Q  27 gaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacca 126  Q
    ||||||||||||||| ||||  ||||||||| |||| |||  ||| |||| ||| |||| ||||||||| | |  |||||||||||||||||||||| ||    
T  32373572 gaacttttgatgccactgtacaaacagtgga-gttactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttcatca 32373474  T
Q  127 ta 128  Q
    ||    
T  32373473 ta 32373472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 34133041 - 34132940
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| |||||||  ||||||||  ||||| |||  |||||||| ||  |||| |||||| ||||| |||||||||||| || ||||||    
T  34133041 gactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcgtgactt 34132942  T
Q  122 ca 123  Q
    ||    
T  34132941 ca 34132940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 22451084 - 22450968
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||||||   ||  ||||||| | || || ||| |||| |||| ||| |||| |||| ||||||| | |||| |||||    
T  22451084 atactatggggactgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcatt 22450985  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  22450984 ctcatgacttcaccata 22450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 45174558 - 45174502
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||| |||||||| |||||||||||| |||||||| |||||||  ||||||||||||    
T  45174558 ttttgatgttatagtgttaacttcaccaaaaaagttattctcacaacttcaccataa 45174502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 53176170 - 53176086
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttca 97  Q
    ||||||||| ||||||||||||||||  ||||||  |||||||||  ||| | |  |||||||| ||||||| ||||||||||||    
T  53176170 atactatgaggactgaacttttgatgttattgtacaaacagtggacattacttacaacatttttgatgttatgatgttaacttca 53176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 23165838 - 23165877
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  23165838 ttaacttcactaaaaaaatcattatcatgacttcaccata 23165877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 24489032 - 24489135
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| ||||||   |||||||| |||||| |||  |||||||| ||  |||| | |||||||||| |||||| ||||| || ||||||    
T  24489032 gactgaacttttgatgtcattgtgcaaacagtggaatgttactcacaacatttttaatactatagtcttaacttcacaaaaaaaatcattttcgtgactt 24489131  T
Q  122 cacc 125  Q
    ||||    
T  24489132 cacc 24489135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 40640634 - 40640673
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccata 40640673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 42506135 - 42506214
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgtta 91  Q
    ||||||||| |||||||||||||||| |||||||  |||||| || | ||| |||||||| |||| |||||||| |||||    
T  42506135 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtattactcattacaattttgatgttatagtgtta 42506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 49359628 - 49359667
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  49359628 ttaacttcacaaaaaaagtcattttcatgacttcaccata 49359667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 54828807 - 54828877
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||| |||||||||||| ||||||||| ||||||||| || |||||| | ||| | |||||||||||||||    
T  54828807 tgttactcattacatttt-tatgttatagtgttaactttaccaaaaaaattatttttatgacttcaccataa 54828877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 44891579 - 44891510
Alignment:
Q  55 ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    |||||||| |||  ||| |||| |||||||| ||||||||||||  ||||||||||| |||||||||||||    
T  44891579 ggatgttactcacaacacttttgatgttatagtgttaacttcac-caaaaagtcattttcatgacttcacc 44891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 21193647 - 21193606
Alignment:
Q  87 tgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||||| | |||||||||||||||||||| ||||||    
T  21193647 tgttaacttcaccagaaaagtcattctcatgactttaccata 21193606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 43976033 - 43976062
Alignment:
Q  100 aaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||||||||||||||||||||||||||    
T  43976033 aaaaaagtcattctcatgacttcaccataa 43976062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 27480439 - 27480555
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaac-agtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| ||  |||  ||| | |||||| || |||||| | |||| |||||||| |||| |||| || |||||  |||||    
T  27480439 atactatggggactgaacttttgatgtcaccgtacaaacaattggatgctactcattatacttttgatgttatagtgttgactttaccaaaaatatcatt 27480538  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||| ||||    
T  27480539 ctcatgacttcatcata 27480555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 32180747 - 32180783
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  32180747 ttaacttcactagaaaagtcattctcataacttcacc 32180783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 44186561 - 44186677
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| || ||||  ||||| ||  ||||| |||  ||| |||| ||| |||| |||||||||||| |||||| |||||    
T  44186561 atactatggggactgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcatt 44186660  T
Q  112 ctcatgacttcaccata 128  Q
    |||  ||||||| ||||    
T  44186661 ctctcgacttcatcata 44186677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 53818509 - 53818549
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||||||||| | |||| |||||||||||||||||||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataa 53818549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 5657542 - 5657658
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||  ||||| |||  ||| |||| |||||||| |||||||||||||| ||||||||||    
T  5657542 atactatgaagactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcatt 5657641  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  5657642 ctcatgacttcaccata 5657658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 24211841 - 24211725
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | ||||||||||||||||||| ||  |||||| || ||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  24211841 atactatgagggctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcatt 24211742  T
Q  112 ctcatgacttcaccata 128  Q
    || ||||||||||||||    
T  24211741 cttatgacttcaccata 24211725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 18797427 - 18797313
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| || ||||||||||||| |||||||  ||||||||  ||||| ||||||||||||||||||||   |||||||||||| ||||||||||||    
T  18797427 atactatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgttag--tgttaacttcaccaaaaaagtcatt 18797330  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  18797329 ctcatgacttcaccata 18797313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 32821114 - 32821230
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||| || ||||||||||||||||||||||||  ||||||||  ||||| ||| ||||||||| |||||||| |||||||||||| |||||| |||||    
T  32821114 atactacgaggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcaccaaaaaaatcatt 32821213  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  32821214 ttcatgacttcaccata 32821230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 37109962 - 37109856
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| |||||||  ||| ||||  ||||| |||||||||||||||||||||| |||||||||||| |||||||||||| | |||||||    
T  37109962 gactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgactt 37109863  T
Q  122 caccata 128  Q
    |||||||    
T  37109862 caccata 37109856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 7334894 - 7334781
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||  ||||||||||||||| |||||||  ||||||||  ||||| ||||||||| |||||||||||| |||||||||||  ||||||||||||    
T  7334894 atactatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcatt 7334795  T
Q  112 ctcatgacttcacc 125  Q
    |||| |||||||||    
T  7334794 ctcacgacttcacc 7334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 17842657 - 17842763
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||| ||||||||| |||||||  ||| ||||  ||||| |||||||||||||||||||||| |||||||||||| |||||||||||| | |||||||    
T  17842657 gactgagcttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgactt 17842756  T
Q  122 caccata 128  Q
    |||||||    
T  17842757 caccata 17842763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 30055627 - 30055510
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttca-ctaaaaaagtcat 110  Q
    ||||||||| |||||||||||||||| |||||||  |||||| || ||||| |||||||| |||| || ||||| ||||||||||| | |||||||||||    
T  30055627 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcat 30055528  T
Q  111 tctcatgacttcaccata 128  Q
    ||| ||||||||||||||    
T  30055527 tcttatgacttcaccata 30055510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 38258645 - 38258532
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| || ||||||||||||| |||||||  ||| ||| | ||||| |||||||||||||||||||||| |||||||||||| |||||| |||||    
T  38258645 atactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatt 38258546  T
Q  112 ctcatgacttcacc 125  Q
     | |||||||||||    
T  38258545 tttatgacttcacc 38258532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 43686130 - 43686025
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttc 122  Q
    ||||||||||||||||||||||||  |||||||| ||||| |||  |||||||| || ||||| ||||||||||||  ||||||||||| || |||||||    
T  43686130 gactgaacttttgatgccattgtacaaacagtgggtgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgacttc 43686031  T
Q  123 accata 128  Q
    ||||||    
T  43686030 accata 43686025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 31579125 - 31579246
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaa-----cagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaag 106  Q
    |||||||||||||||||||||||||| |||||||  ||     ||||||  ||||| ||||||||||||| |||||||| |||||||||||| ||||||     
T  31579125 atactatgaagactgaacttttgatgtcattgtataaattaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaa 31579224  T
Q  107 tcattctcatgacttcaccata 128  Q
    | ||||| ||||||||||||||    
T  31579225 ttattcttatgacttcaccata 31579246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 8861385 - 8861269
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||| |||||||||||||| ||||  ||||||||  |||||||||| ||| |||| ||| |||| |||||||||| | | ||||||||||    
T  8861385 atactatggggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaacttcgcgagaaaagtcatt 8861286  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  8861285 ctcatgacttcaccata 8861269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 26524388 - 26524504
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||| ||||||||||||| || |  |||| |||| ||||| |||  |||||||| |||||||| ||||||| |||| | ||||||||||    
T  26524388 atactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaacatcaccagaaaagtcatt 26524487  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  26524488 ctcatgacttcaccata 26524504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 27283844 - 27283728
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||  |||||||  ||| ||||  ||||| ||||||||||||| |||||||| |||||||||||| |||||| |||||    
T  27283844 atactatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatt 27283745  T
Q  112 ctcatgacttcaccata 128  Q
     | || |||||||||||    
T  27283744 tttataacttcaccata 27283728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 10481705 - 10481587
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga--tgttattcattacattttttatgttataatgttaacttcact-aaaaaagtca 109  Q
    ||||||| ||||||||| |||||||| |||||||  ||||||||   ||||| |||||| ||||||||||||||| ||||||||||| | ||||||||||    
T  10481705 atactataaagactgaatttttgatgtcattgtacaaacagtgggggtgttactcattatattttttatgttatagtgttaacttcattaaaaaaagtca 10481606  T
Q  110 ttctcatgacttcaccata 128  Q
    ||||| | |||| ||||||    
T  10481605 ttctcctaactttaccata 10481587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 27421450 - 27421556
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| |||||||  ||||||||| ||||| |||  ||| |||| |||||||| |||||||||||| |||||| ||||| ||| |||||    
T  27421450 gactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgactt 27421549  T
Q  122 caccata 128  Q
    |||||||    
T  27421550 caccata 27421556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 37347122 - 37347005
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || ||||  |||| |||  ||||| |||||| |||||| ||| |||| | |||||||||| |||||| |||||    
T  37347122 atactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatcatt 37347023  T
Q  112 ctcatgacttcaccataa 129  Q
     |||||||||||||||||    
T  37347022 ttcatgacttcaccataa 37347005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 33688323 - 33688438
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||  |||||||||||||||||||| || |  |||||| |||||||| |||| ||| |||| |||||||| ||||||||| || | ||||||||||    
T  33688323 atactatagagactgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaactt-accagaaaagtcatt 33688421  T
Q  112 ctcatgacttcaccata 128  Q
    ||||| |||||||||||    
T  33688422 ctcataacttcaccata 33688438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 22687339 - 22687228
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  ||||||||||||||| ||| || |  ||||||||| ||||| |||  |||||||| |||||||| |||||||||||  | ||||||||||    
T  22687339 atactatggggactgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatagtgttaacttcatcagaaaagtcatt 22687240  T
Q  112 ctcatgacttca 123  Q
    ||||||||||||    
T  22687239 ctcatgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 12390734 - 12390807
Alignment:
Q  55 ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||| |||||||| |||| |||||||| |||||||||||| |||||||||  ||| ||||||||||||||    
T  12390734 ggatgttactcattacacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccata 12390807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 25691667 - 25691723
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  25691667 ttttgatgttatagtgttaacttcacgagaaaagtcattctcatgacttcaccataa 25691723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 31520794 - 31520901
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| || ||||  |||| |||| ||||| ||| || |||||| ||| |||| | |||||||||| |||||||||||| |||||||||    
T  31520794 gactgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgactt 31520893  T
Q  122 caccataa 129  Q
    || |||||    
T  31520894 catcataa 31520901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 38053584 - 38053493
Alignment:
Q  15 actatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaa 105  Q
    |||||||  ||||||||||||||| |||||||  |||||| || | ||| |||||||||||||||||||||| | |||||||||| ||||||    
T  38053584 actatgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcaccaaaaaa 38053493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 9355943 - 9356004
Alignment:
Q  68 tacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||||||||| |||| |||||| ||||| ||||  ||||||||||||||||||||||||    
T  9355943 tacattttttatgctatagtgttaaattcaccaaaatggtcattctcatgacttcaccataa 9356004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 23111277 - 23111176
Alignment:
Q  26 tgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    |||||||||||||||||||||  || |||||  ||||| |||  | |||||| |||||||| |||||||||||| | |||| ||||| ||||||||||||    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcac 23111178  T
Q  125 ca 126  Q
    ||    
T  23111177 ca 23111176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 48928680 - 48928741
Alignment:
Q  68 tacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||| |||| |||||||| |||| ||||||| | ||||||||||||||||||||||||||||    
T  48928680 tacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcaccataa 48928741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 21991736 - 21991623
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| || ||||  ||||||||  ||||| ||   ||| |||| ||| |||| |||||||||||| | |||| |||||    
T  21991736 atactatggggactgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcatt 21991637  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  21991636 ctcatgacttcacc 21991623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 44413440 - 44413557
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcact-aaaaaagtcat 110  Q
    |||||||| |||| |||||||||||  || ||||  |||| |||  ||||| ||| || |||||| |||||||| ||||||||||| | |||||||||||    
T  44413440 atactatggagaccgaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatagtgttaacttcattaaaaaaagtcat 44413539  T
Q  111 tctcatgacttcaccata 128  Q
    | ||||||||| ||||||    
T  44413540 tttcatgactttaccata 44413557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 4583019 - 4582903
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| |||||||  || |||||  ||||| |||  |||||||| ||  |||| | |||||||||| | ||||||||||    
T  4583019 atactatggggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcatt 4582920  T
Q  112 ctcatgacttcaccata 128  Q
     || |||||||||||||    
T  4582919 ttcgtgacttcaccata 4582903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 29173640 - 29173540
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||||||||| ||||| |||  ||| |||| ||  || | |||||||||||| | ||||||||||    
T  29173640 atactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatactacagtgttaacttcaccagaaaagtcatt 29173541  T
Q  112 c 112  Q
    |    
T  29173540 c 29173540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 6546558 - 6546503
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| ||| |||| |||||||||||||| |||| ||||||| ||||||||||||||    
T  6546558 ttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcaccata 6546503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 10359284 - 10359391
Alignment:
Q  22 agactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgact 120  Q
    ||||||||||||||||| || ||||  || ||| |||||||| ||| |||| |||| ||| |||||  |||| || || | |||||||||| ||||||||    
T  10359284 agactgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctataagattaattttaccagaaaagtcattatcatgact 10359383  T
Q  121 tcaccata 128  Q
    ||||||||    
T  10359384 tcaccata 10359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 15612885 - 15612935
Alignment:
Q  78 atgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||| |||||||||||| | ||| || ||||||||||||||||||||    
T  15612885 atgttatagtgttaacttcacaagaaacgttattctcatgacttcaccata 15612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 48928413 - 48928466
Alignment:
Q  68 tacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||| |||| |||||||| |||| ||||||| | ||||||||||||||||||||    
T  48928413 tacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 241024 - 241060
Alignment:
Q  92 acttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccata 241060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 26980413 - 26980325
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    ||||||||||||||||||| ||||  ||| ||||  ||||| |||  ||| |||| ||| ||||||||||||||||| | |||||||||    
T  26980413 gactgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaacttcaccataaaagtcat 26980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 34362210 - 34362325
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||  |||||||||| ||||||| ||||  ||||||||  ||||| |||  ||| |||| ||| |||| |||||||||  ||| ||||||||||    
T  34362210 atactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcatt 34362308  T
Q  112 ctcatgacttcaccata 128  Q
    ||||| | |||||||||    
T  34362309 ctcataatttcaccata 34362325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 25184238 - 25184122
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||||| |||||||| |||| |||||||  |||||| || ||||| ||||||||||||| |||||||| |||||||||||| |||| |||||||    
T  25184238 atactatgaagattgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcatt 25184139  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  25184138 ctcatgacttcaccata 25184122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 19440738 - 19440843
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| ||||||||||||||||||||||||  ||| ||||| ||||| ||||||||||||| |||||||| ||||||| |||| ||||||||||||||||    
T  19440738 tatgaggactgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaacatcaccaaaaaagtcattctca 19440837  T
Q  116 tgactt 121  Q
    ||||||    
T  19440838 tgactt 19440843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 6864160 - 6864044
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||| ||||||||||| ||||||  || ||| ||||||||||||||| |||||| |||||||| || ||||||||| ||||||||||||    
T  6864160 atactatgaggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtcatt 6864061  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||| ||||||||    
T  6864060 ctcatgacatcaccata 6864044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 25701143 - 25701260
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || ||||  |||||| || ||||| ||| |||| |||| |||||||||||||||||| || ||||||||||||    
T  25701143 atactatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaactttaccaaaaaagtcatt 25701242  T
Q  112 ctcatgacttcaccataa 129  Q
     |||||||||||||||||    
T  25701243 atcatgacttcaccataa 25701260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 34361589 - 34361693
Alignment:
Q  25 ctgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttca 123  Q
    |||||||||| ||| |||| ||  ||||||||  ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  34361589 ctgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttca 34361688  T
Q  124 ccata 128  Q
    |||||    
T  34361689 ccata 34361693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 47253873 - 47253758
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||| |||||||||||||||| || ||||  |||| ||| ||||| |||  ||| |||| ||| |||| |||||||||||| |||||||||||||    
T  47253873 atactatgaggactgaacttttgatgtcactgtataaacaatgggtgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcattc 47253774  T
Q  113 tcatgacttcaccata 128  Q
    ||||||||||||||||    
T  47253773 tcatgacttcaccata 47253758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 55477977 - 55478097
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaaca----gtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagt 107  Q
    ||||||||| |||||||||||||||| |||||||  ||||    ||||| ||||| || |||||||||| |||||||| |||||||||||| |||||| |    
T  55477977 atactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaat 55478076  T
Q  108 cattctcatgacttcaccata 128  Q
    |||||||||||||||||||||    
T  55478077 cattctcatgacttcaccata 55478097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 29584286 - 29584400
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||||||||||||||||||||||||||  ||||||| | ||||| |||  ||| |||| |||||||| |||||||||||| | ||||||||||    
T  29584286 atactatgaagactgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcatt 29584383  T
Q  112 ctcatgacttcaccata 128  Q
    | || ||||||||||||    
T  29584384 cccacgacttcaccata 29584400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 27396741 - 27396625
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||  ||||||||||| |||||||  |||||| || ||||| |||| ||| |||| ||| ||||||||||||||||| | ||||||||||    
T  27396741 atactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaacttcaccagaaaagtcatt 27396642  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  27396641 ctcatgacttcaccata 27396625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 4396405 - 4396339
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  4396405 tgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcac 4396339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 32912712 - 32912782
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| ||||||||||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  32912712 tgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccata 32912782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 49376092 - 49375978
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcacta-aaaaagtcat 110  Q
    ||||||||||||||||||||||||||||| ||||  | |||| || ||||| |||  ||| |||| ||| ||||||||||||||||| | ||||||||||    
T  49376092 atactatgaagactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcat 49375993  T
Q  111 tctcatgacttcacc 125  Q
    |||||||||||||||    
T  49375992 tctcatgacttcacc 49375978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 879634 - 879747
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||||||| | ||||||||||| |||||||  |||| || | ||||| ||||||||||||| |||||||| |||| ||||||| |||||| | |||    
T  879634 atactatgaagattaaacttttgatgtcattgtacaaacaatgaggtgttactcattacatttttgatgttatagtgtttacttcaccaaaaaaattatt 879733  T
Q  112 ctcatgacttcacc 125  Q
    ||||||||||||||    
T  879734 ctcatgacttcacc 879747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 35021136 - 35021237
Alignment:
Q  28 aacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacca 126  Q
    ||||||||| |||| ||||  ||||||||  ||||| ||| ||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  35021136 aacttttgacgccaatgtacaaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcacca 35021235  T
Q  127 ta 128  Q
    ||    
T  35021236 ta 35021237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 37663827 - 37663941
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||||||||  ||||| |||||||| |||| ||||||   |||||||||||  ||||||||||||    
T  37663827 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgttag--tgttaacttcatcaaaaaagtcatt 37663924  T
Q  112 ctcatgacttcaccata 128  Q
    || ||||||||||||||    
T  37663925 cttatgacttcaccata 37663941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 19089539 - 19089655
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||| ||  ||||||||  ||||| |||||||| |||| || ||||| |||||||||||  |||||||| |||    
T  19089539 atactatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttatt 19089638  T
Q  112 ctcatgacttcaccata 128  Q
    || ||||||||||||||    
T  19089639 cttatgacttcaccata 19089655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 34948187 - 34948300
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    ||||| ||||||||||||||||||| | ||  ||||||||  ||||| |||  ||| |||| |||||||| |||||||||| | | ||||||||||||||    
T  34948187 tatgaggactgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctca 34948286  T
Q  116 tgacttcaccataa 129  Q
    ||||||||||||||    
T  34948287 tgacttcaccataa 34948300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 39398036 - 39397927
Alignment:
Q  20 gaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatga 118  Q
    ||||||||||||||||||| || ||||  |||| |||  ||||| |||  ||| |||| |||||||| |||||||||||| | |||||||||||| ||||    
T  39398036 gaagactgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatga 39397937  T
Q  119 cttcaccata 128  Q
    ||||||||||    
T  39397936 cttcaccata 39397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 17167838 - 17167722
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| ||| ||||||||||||| |||||||  ||||||||  ||||| |||  |||||||| || |||||||||||||||||  | ||||||||||    
T  17167838 atactatggagaatgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcatt 17167739  T
Q  112 ctcatgacttcaccata 128  Q
     || | |||||||||||    
T  17167738 ttcgtaacttcaccata 17167722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 17173415 - 17173299
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| ||| ||||||||||||| |||||||  ||||||||  ||||| |||  |||||||| || |||||||||||||||||  | ||||||||||    
T  17173415 atactatggagattgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcatt 17173316  T
Q  112 ctcatgacttcaccata 128  Q
     || | |||||||||||    
T  17173315 ttcgtaacttcaccata 17173299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 28003072 - 28003188
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| || ||||  ||||||||| |  || | | |||| |||| ||| |||| |||| ||||||| | ||||||||||    
T  28003072 atactatgatgactgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcatt 28003171  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  28003172 ctcatgacttcaccata 28003188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 50697354 - 50697254
Alignment:
Q  26 tgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    ||||||||||||| |||||||  ||| || || ||||| || ||| ||||||||||||||| |||| |||||||||||||| ||||| | ||||||||||    
T  50697354 tgaacttttgatgtcattgtacaaacggtagggtgttactcgttatattttttatgttatagtgtttacttcactaaaaaaatcatttttatgacttcac 50697255  T
Q  125 c 125  Q
    |    
T  50697254 c 50697254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 55241190 - 55241306
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  ||||||||||||||||||| ||||  ||||||||  ||||| ||   ||| |||| ||  |||| | |||||||||||| ||||||||||    
T  55241190 atactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcatt 55241289  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  55241290 ctcatgacttcaccata 55241306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 4598107 - 4598001
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||||||||||||||| ||||  ||||||||  ||||| |||  ||| |||  |||||||| |||||||||||| | |||||||||||| |||||||    
T  4598107 gactgaacttttgatgccactgtacaaacagtggggtgttactcacaacactttg-atgttatagtgttaacttcaccagaaaagtcattctaatgactt 4598009  T
Q  122 caccataa 129  Q
    ||||||||    
T  4598008 caccataa 4598001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 3042726 - 3042620
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    ||||||| |||||||| |||||||  ||| ||||  | ||| |||||||||||| ||||||||| |||||||||||| |||||| ||||| | |||| ||    
T  3042726 gactgaatttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgattt 3042627  T
Q  122 caccata 128  Q
    |||||||    
T  3042626 caccata 3042620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 38011969 - 38011863
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| ||  |||  ||||||||  || |||||| |||| |||| |||||||| |||| ||||||| | ||||||||||||||||| ||    
T  38011969 gactgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgattt 38011870  T
Q  122 caccata 128  Q
    |||||||    
T  38011869 caccata 38011863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 52516655 - 52516605
Alignment:
Q  79 tgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  52516655 tgttatagtgttaacttcaccataaaagtcattctcatgacttcaccataa 52516605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 9139313 - 9139256
Alignment:
Q  71 attttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| ||||| ||||||||||| |||||||||| | ||||||||||||||||    
T  9139313 attttttatgctataacgttaacttcaccaaaaaagtcaatttcatgacttcaccata 9139256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 37287855 - 37287742
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaa-gtcattctc 114  Q
    ||||| || |||||||||||||||| ||||  ||||||||  ||||| |||  ||| |||| |||||||| ||||||||| || |||||| |||||||||    
T  37287855 tatgaggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctc 37287756  T
Q  115 atgacttcaccata 128  Q
    || |||||||||||    
T  37287755 attacttcaccata 37287742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 36493774 - 36493890
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| || ||||  |||| |||  ||||| ||| || |||||| ||| |||| | |||||||||| |||||||| |||    
T  36493774 atactatggggactgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttatt 36493873  T
Q  112 ctcatgacttcaccata 128  Q
     ||||||||||||||||    
T  36493874 ttcatgacttcaccata 36493890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 42199802 - 42199738
Alignment:
Q  64 tcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||||| |||||||| | |||||||||| |||||| ||||||| |||| |||||||||    
T  42199802 tcattacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcaccata 42199738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 53124366 - 53124296
Alignment:
Q  58 tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| |||||| |||||| |||||||| |||||||||||| |||||| ||||| | ||||||||| ||||    
T  53124366 tgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcata 53124296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 7703642 - 7703533
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| ||  |||  ||||||||  ||||| | |  ||| |||| |||||||| |||||||||||| | ||||||||||    
T  7703642 atactatggggactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcatt 7703543  T
Q  112 ctcatgactt 121  Q
    ||||||||||    
T  7703542 ctcatgactt 7703533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 4205221 - 4205125
Alignment:
Q  33 ttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||| |||||||  ||||||||  |||||||||  |||||||| || ||||| |||||||||||  | |||||||||| || |||||||||||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccata 4205125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 20097490 - 20097530
Alignment:
Q  88 gttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  20097490 gttaacttcaccagaaaagtcattctcatgacttcaccata 20097530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 30002710 - 30002826
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||| ||||||||||||||||||| || ||||  ||||||| | ||||| |||  ||| |||| ||| || | |||||||||||| | |||| |||||    
T  30002710 atactaagaagactgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcatt 30002809  T
Q  112 ctcatgacttcaccata 128  Q
     | ||||||||||||||    
T  30002810 ttaatgacttcaccata 30002826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 32579508 - 32579452
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||| ||||||||||||| ||||||| | ||||||||||||||  ||||||||||||    
T  32579508 ttttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataa 32579452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 2266856 - 2266895
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  2266856 ttaacttcactagaaaagtcattatcatgacttcaccata 2266895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 7152253 - 7152308
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||||||||||||| || | ||||||||||  |||||||||||||||    
T  7152253 ttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccata 7152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 17272075 - 17272020
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||| |||||||||||| | ||||||||||| || ||||||||||||    
T  17272075 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccata 17272020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 17612383 - 17612344
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  17612383 ttaacttcattaaaaaaatcattctcatgacttcaccata 17612344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 37775780 - 37775681
Alignment:
Q  27 gaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcacc 125  Q
    ||||||||||||||| ||||  ||||||||  ||||| |||  |||||||| || ||||| || ||||||||| |||||| ||||| | |||||||||||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcacc 37775681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 38812260 - 38812299
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccata 38812299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 46884175 - 46884232
Alignment:
Q  67 ttacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    |||||||||||||||||   |||||||||| | |||||||||||| | ||||||||||    
T  46884175 ttacattttttatgttacggtgttaacttcgccaaaaaagtcatttttatgacttcac 46884232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 2704560 - 2704520
Alignment:
Q  89 ttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||||||||| | |||||||||| |||||||||||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataa 2704520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 23761197 - 23761089
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  |||||||||||||||| || | ||  ||||||| | ||||| |||  ||| |||| |||||||| ||||||||| || | || |||||||    
T  23761197 atactatggggactgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaactttacaagaatagtcatt 23761098  T
Q  112 ctcatgact 120  Q
    |||||||||    
T  23761097 ctcatgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 47073656 - 47073696
Alignment:
Q  88 gttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||| |||||||||||| ||||||||| ||||||    
T  47073656 gttaacttcaccaaaaaagtcattatcatgactttaccata 47073696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 8012 - 7896
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| |||||||  ||||||||  ||||| |||||||| |||| |||||||| |||||||||||  ||||||||||||    
T  8012 atactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcatt 7913  T
Q  112 ctcatgacttcaccata 128  Q
    || || |||||||||||    
T  7912 cttataacttcaccata 7896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 146076 - 146189
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||||| |||||||||||||| |||| ||  || | |||  ||||| |||||||||||||||||||||||||||||||| || |||||| |||||    
T  146076 atactatgaaggctgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcatt 146175  T
Q  112 ctcatgacttcacc 125  Q
    || |||||||||||    
T  146176 cttatgacttcacc 146189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 5627516 - 5627403
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | |||||||||||||| |||| ||  || |||||  ||||| |||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  5627516 atactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcatt 5627417  T
Q  112 ctcatgacttcacc 125  Q
    || |||||||||||    
T  5627416 cttatgacttcacc 5627403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 4318895 - 4318998
Alignment:
Q  26 tgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcac 124  Q
    ||||||||||||| || ||||  ||||||||  ||||| |||| ||| |||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  4318895 tgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 4318994  T
Q  125 cata 128  Q
    ||||    
T  4318995 cata 4318998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 1945959 - 1945845
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttca-ctaaaaaagtcat 110  Q
    ||||||||| | |||||||||||||| |||| ||  ||||||||  ||||| ||||||||||||| |||||||| ||||||||||| | |||||||||||    
T  1945959 atactatgagggctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcat 1945860  T
Q  111 tctcatgacttcacc 125  Q
    ||| |||||||||||    
T  1945859 tcttatgacttcacc 1945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 7055274 - 7055391
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | |||||||||||||| |||| ||  || |||| | ||||| | |||| ||||||||||||||| |||||||||||| |||||| |||||    
T  7055274 atactatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcatt 7055373  T
Q  112 ctcatgacttcaccataa 129  Q
    || |||||||||||||||    
T  7055374 cttatgacttcaccataa 7055391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 30353417 - 30353533
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtg-gatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    |||||||| |||||||||| | ||||||| ||||  ||||||| ||| ||| ||   ||| |||| ||||||||||||||||||||| | ||||||||||    
T  30353417 atactatggagactgaactatcgatgccactgtacaaacagtgagatattactcgcaacacttttgatgttataatgttaacttcaccagaaaagtcatt 30353516  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  30353517 ctcatgacttcaccata 30353533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 20768209 - 20768095
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattc 112  Q
    ||||||||| ||||||||||||||||||| |   | |||| |||||| || ||| |||| |||| ||| |||| |||| ||||||| | |||||||||||    
T  20768209 atactatgaggactgaacttttgatgccactaaca-aacaatggatgctactcactacacttttgatgctatagtgttgacttcaccagaaaagtcattc 20768111  T
Q  113 tcatgacttcaccata 128  Q
    ||||||||||||||||    
T  20768110 tcatgacttcaccata 20768095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 8513348 - 8513242
Alignment:
Q  23 gactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgactt 121  Q
    |||||||||||||||| || ||||  ||||||||  ||||| |||  ||| |||| || ||||| |||||||||||| | ||||||||||||||||||||    
T  8513348 gactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctcatgactt 8513249  T
Q  122 caccata 128  Q
    |||||||    
T  8513248 caccata 8513242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 18498559 - 18498446
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga--tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcat 110  Q
    ||||||||| ||||||||||||||||||| ||||  ||| ||||   ||||  ||| |||| |||| ||| ||||||||||||||||| |  ||||||||    
T  18498559 atactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtcat 18498460  T
Q  111 tctcatgacttcac 124  Q
    ||||||||||||||    
T  18498459 tctcatgacttcac 18498446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 21017171 - 21017284
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  ||||||||||||||||||||||||  || | |||  ||||| |||  |||||||||||  || |||||||||||||| ||||||||||||    
T  21017171 atactatggggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcatt 21017270  T
Q  112 ctcatgacttcacc 125  Q
     || ||||||||||    
T  21017271 ttcgtgacttcacc 21017284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 29182284 - 29182171
Alignment:
Q  17 tatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctca 115  Q
    |||| ||||||||||||||||| || ||||  ||||||||  ||||| |||  ||| |||| |||||||| |||||||||||  || ||| |||||||||    
T  29182284 tatggagactgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctca 29182185  T
Q  116 tgacttcaccataa 129  Q
    ||||||||||||||    
T  29182184 tgacttcaccataa 29182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 3879998 - 3880114
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagt-ggatgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  || ||||||||||||| |||||||  |||||| || ||||| |||  ||| |||| ||  ||||||||||||||||| | ||||||||||    
T  3879998 atactatggggattgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcaccagaaaagtcatt 3880097  T
Q  112 ctcatgacttcaccata 128  Q
    ||| |||||||||||||    
T  3880098 ctcgtgacttcaccata 3880114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 15491740 - 15491631
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| | ||||||||||||||||| ||||  || |||||  ||||| |||  ||| |||| |||||| |||||||||||||| | ||||||||||    
T  15491740 atactatgagggctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaacttcacgagaaaagtcatt 15491641  T
Q  112 ctcatgactt 121  Q
    ||||| ||||    
T  15491640 ctcataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 6091253 - 6091353
Alignment:
Q  24 actgaacttttgatgccattgtaagaacagtgg-atgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcatgacttc 122  Q
    ||||||||||||||| |||||||  |||| |||  ||||| ||| ||||||||||||||||  |||||||||| || |||||| | ||| ||||||||||    
T  6091253 actgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgtta-catgttaactttaccaaaaaaattattttcatgacttc 6091351  T
Q  123 ac 124  Q
    ||    
T  6091352 ac 6091353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 6089033 - 6088917
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtggat-gttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||  ||||||||||||||||||| | ||  ||||||||   |||| |||  ||| |||| ||  |||| |||||||||||| | |||| |||||    
T  6089033 atactatggtgactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaacttcaccagaaaaatcatt 6088934  T
Q  112 ctcatgacttcaccata 128  Q
    |||||||||||||||||    
T  6088933 ctcatgacttcaccata 6088917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 7235094 - 7235209
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||||||| ||  |||  ||||||||  || || ||| |||| |||| |||||||| |||| |||||||   ||||||||||    
T  7235094 atactatga-gactgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttgacttcaccggaaaagtcatt 7235192  T
Q  112 ctcatgacttcaccata 128  Q
    ||||| |||||||||||    
T  7235193 ctcataacttcaccata 7235209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 33893122 - 33893177
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    |||| |||||||| ||||||||||||||||||| | ||||| ||||||| ||||||    
T  33893122 ttttgatgttatagtgttaacttcactaaaaaaattattctaatgactttaccata 33893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 24662189 - 24662229
Alignment:
Q  88 gttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||||||||||| |||||||||| ||||||||| ||||||    
T  24662189 gttaacttcactagaaaagtcattatcatgactttaccata 24662229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 259 - 143
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||| ||||| |||  |||||||||||  || | |||||||||||| | ||||||||||    
T  259 atactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcaccagaaaagtcatt 160  T
Q  112 ctcatgacttcaccata 128  Q
     || |||||||||||||    
T  159 ttcgtgacttcaccata 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 94458 - 94547
Alignment:
Q  28 aacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcattctcat 116  Q
    |||||||||||||| ||||  ||||||||  ||||| ||| |||| |||| ||||||||||||||||||||  | |||||||||| ||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaacttcatcagaaaagtcattttcat 94547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 44082 - 43966
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||| |||||||||||  ||||  ||  ||||| ||||||||||||| || |||||  ||||||||||| ||||||||| ||    
T  44082 atactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtcttt 43983  T
Q  112 ctcatgacttcaccata 128  Q
    || | ||||||||||||    
T  43982 cttacgacttcaccata 43966  T

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Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 154705 - 154821
Alignment:
Q  13 atactatgaagactgaacttttgatgccattgtaagaacagtgga-tgttattcattacattttttatgttataatgttaacttcactaaaaaagtcatt 111  Q
    ||||||||| |||||||||||| |||||||||||  ||||  ||  ||||| ||||||||||||| || |||||  ||||||||||| ||||||||| ||    
T  154705 atactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtcttt 154804  T
Q  112 ctcatgacttcaccata 128  Q
    || | ||||||||||||    
T  154805 cttacgacttcaccata 154821  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 100886 - 100830
Alignment:
Q  72 ttttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccata 128  Q
    ||||| ||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  100886 tttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccata 100830  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 42412 - 42356
Alignment:
Q  73 tttttatgttataatgttaacttcactaaaaaagtcattctcatgacttcaccataa 129  Q
    |||| |||||||| |||||||||||| | |||| | |||||||||||||||||||||    
T  42412 ttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataa 42356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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