View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17783_low_12 (Length: 279)
Name: NF17783_low_12
Description: NF17783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17783_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 30195492 - 30195743
Alignment:
| Q |
12 |
aaaggctattagcaggaaagaataaaagatcacgtgaatattgcttagatctaccaaaatcaccatgttttgaaattcacgaaattggttcttcactaca |
111 |
Q |
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| T |
30195492 |
aaaggctattagcaggaaagaataaaagatcacgtgaatattgcttagatctaccaaaatcaccatgttttgaaattcacgaaattggttcttcactaca |
30195591 |
T |
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| Q |
112 |
aatcattctcacgtgtgggttagatagccaattcattttctatgaaataattcgtgtgttacatgaagagaatgtagacataaagagtgttaattcctct |
211 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
30195592 |
aatcattctcacgtgtgggttagataaccaattcattttctatgaaataattcgtgtgttacatgaagagaatgtagacataaggagtgttaattcctct |
30195691 |
T |
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| Q |
212 |
aaggttggagataattcactccttcatgttgttcatgctgaggtatatatct |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30195692 |
aaggttggagataattcactccttcatgttgttcatgctgaggtatatatct |
30195743 |
T |
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