View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17783_low_6 (Length: 382)
Name: NF17783_low_6
Description: NF17783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17783_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 18 - 375
Target Start/End: Original strand, 25361738 - 25362097
Alignment:
| Q |
18 |
gatttcgcgattgtataaggaaacttaatttatacaacactgcaagattgtgaagttgttaataaatcctatatattg-attacattttttagtattggt |
116 |
Q |
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| T |
25361738 |
gatttcgcgattgtataaggaaacttaatttatacaacactgcaagattgtgaagttgttaataaatcctatatattggattacattttttagtattggt |
25361837 |
T |
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| Q |
117 |
atgtatgcatacttggattgattggaatctctgatctaatgatgtttgtttgttgcatgatcattgacctattttctttggtgggtcgtttttgagatgt |
216 |
Q |
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| T |
25361838 |
atgaatgcatacttggattgattggaatctctgatctaatgatgtttgtttgttgcatgatcattgacctattttctttggtgggtcgtttttgagatgt |
25361937 |
T |
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| Q |
217 |
attctcaagtgattgttgatatgatgaattataaaaagactcatatttgtttcctttccacataacctctcattgatgagatt-tttctcttctccaact |
315 |
Q |
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| T |
25361938 |
attctgaagtggtagttgatatgatgaattataaaaagactcatattcgtttcctttccacataacctcttattgatgagattatttctcttctccaact |
25362037 |
T |
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| Q |
316 |
aataatggtcattttgcacctttaattgggactattatagattcagactttcctttgctt |
375 |
Q |
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| T |
25362038 |
aataatggtcattttgcacctttaattgggactattatagattcagactttcctttgctt |
25362097 |
T |
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