View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17787_low_23 (Length: 311)
Name: NF17787_low_23
Description: NF17787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17787_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 84 - 299
Target Start/End: Complemental strand, 50408201 - 50407986
Alignment:
| Q |
84 |
ataataataatctttttgagtatttggttggttggtagttgataccatcgaattttccacttttccttttccttttagtgaagaagaagaattttgagtt |
183 |
Q |
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| T |
50408201 |
ataataataatcgttttgagtatttggttggttggtagttgataccatcgaattttccacttttccttttccttttagtgaagaagaagaattttgagtt |
50408102 |
T |
|
| Q |
184 |
aaaaccgataacaggttttcctcttatctcaagataagaattatccaagtcatacccatttacttgtgtaggggaaaagtatttcgtcactgttccttac |
283 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50408101 |
aaaaccgataacaggttttcctcttatctgaagataagaattatccaagtcatacccatttacttgtgtaggggaaaagtatttcgtcactgttccttac |
50408002 |
T |
|
| Q |
284 |
tctttaagatgaacct |
299 |
Q |
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|||||||||||||||| |
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| T |
50408001 |
tctttaagatgaacct |
50407986 |
T |
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