View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17789_low_17 (Length: 243)

Name: NF17789_low_17
Description: NF17789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17789_low_17
NF17789_low_17
[»] chr4 (63 HSPs)
chr4 (1-142)||(39054734-39054875)
chr4 (1-137)||(39049239-39049375)
chr4 (1-136)||(39236703-39236838)
chr4 (24-136)||(39291945-39292057)
chr4 (140-243)||(36099485-36099588)
chr4 (141-243)||(18135360-18135462)
chr4 (140-243)||(53621375-53621478)
chr4 (133-243)||(4758824-4758934)
chr4 (141-243)||(49122567-49122669)
chr4 (146-243)||(18430302-18430399)
chr4 (135-243)||(38687958-38688066)
chr4 (136-243)||(5970326-5970433)
chr4 (140-243)||(23125644-23125747)
chr4 (150-243)||(35328947-35329040)
chr4 (139-243)||(580458-580562)
chr4 (140-243)||(47948937-47949040)
chr4 (150-240)||(31227279-31227369)
chr4 (151-240)||(2279533-2279622)
chr4 (150-243)||(31854426-31854519)
chr4 (151-243)||(7350253-7350345)
chr4 (140-243)||(2411887-2411990)
chr4 (137-243)||(2385242-2385348)
chr4 (141-243)||(39877402-39877504)
chr4 (139-243)||(19485569-19485673)
chr4 (141-243)||(3085919-3086021)
chr4 (141-243)||(44200019-44200121)
chr4 (150-243)||(53303744-53303837)
chr4 (150-242)||(51833020-51833112)
chr4 (150-240)||(6246616-6246706)
chr4 (141-243)||(39834273-39834375)
chr4 (155-243)||(56216247-56216335)
chr4 (152-243)||(21221128-21221218)
chr4 (181-243)||(20688455-20688517)
chr4 (153-243)||(55292159-55292249)
chr4 (150-243)||(52535998-52536091)
chr4 (138-243)||(21229221-21229326)
chr4 (156-243)||(15170930-15171017)
chr4 (152-223)||(27006515-27006586)
chr4 (156-243)||(38046624-38046711)
chr4 (153-243)||(4698634-4698724)
chr4 (139-205)||(20688501-20688567)
chr4 (150-243)||(43413589-43413681)
chr4 (139-205)||(4758774-4758840)
chr4 (140-210)||(6246688-6246758)
chr4 (197-243)||(32517817-32517863)
chr4 (140-205)||(2385193-2385258)
chr4 (140-205)||(19485657-19485722)
chr4 (140-205)||(31227356-31227421)
chr4 (140-205)||(53621326-53621391)
chr4 (150-211)||(54611982-54612043)
chr4 (33-73)||(33453977-33454017)
chr4 (54-122)||(37835383-37835451)
chr4 (138-194)||(55292108-55292164)
chr4 (138-205)||(580407-580474)
chr4 (196-243)||(29833312-29833359)
chr4 (153-243)||(4698670-4698760)
chr4 (132-210)||(14785006-14785084)
chr4 (139-205)||(36099572-36099638)
chr4 (140-210)||(53225724-53225794)
chr4 (140-205)||(5970277-5970342)
chr4 (139-204)||(15170880-15170945)
chr4 (150-207)||(29833273-29833330)
chr4 (148-204)||(2643614-2643670)
[»] chr3 (67 HSPs)
chr3 (139-243)||(10049665-10049769)
chr3 (142-243)||(6086948-6087049)
chr3 (139-243)||(8243729-8243833)
chr3 (141-243)||(9440175-9440277)
chr3 (141-243)||(26999020-26999122)
chr3 (140-243)||(14768096-14768199)
chr3 (140-243)||(25846558-25846661)
chr3 (150-243)||(49122952-49123045)
chr3 (139-243)||(28564982-28565086)
chr3 (153-240)||(47449927-47450014)
chr3 (152-243)||(52114071-52114162)
chr3 (141-243)||(9465118-9465220)
chr3 (141-243)||(29019734-29019836)
chr3 (150-243)||(335422-335515)
chr3 (140-240)||(28945654-28945754)
chr3 (152-243)||(21653391-21653482)
chr3 (141-243)||(19202297-19202399)
chr3 (150-243)||(18765305-18765398)
chr3 (150-243)||(25113396-25113489)
chr3 (141-243)||(40464517-40464623)
chr3 (139-243)||(42605874-42605978)
chr3 (137-243)||(9190023-9190129)
chr3 (153-243)||(23825160-23825250)
chr3 (140-239)||(40214951-40215050)
chr3 (153-240)||(51698164-51698251)
chr3 (138-234)||(40141930-40142026)
chr3 (141-243)||(42225609-42225711)
chr3 (151-243)||(8825740-8825832)
chr3 (141-243)||(379069-379174)
chr3 (172-243)||(1122305-1122376)
chr3 (157-243)||(22003811-22003897)
chr3 (157-243)||(22011328-22011414)
chr3 (150-243)||(13826120-13826213)
chr3 (155-243)||(44593248-44593336)
chr3 (153-240)||(39341425-39341512)
chr3 (152-222)||(3484342-3484412)
chr3 (140-205)||(10049753-10049818)
chr3 (158-236)||(16660334-16660414)
chr3 (198-243)||(26123046-26123091)
chr3 (140-205)||(29019820-29019885)
chr3 (170-243)||(55139201-55139274)
chr3 (147-193)||(1122372-1122418)
chr3 (139-205)||(26999106-26999172)
chr3 (140-205)||(6086899-6086964)
chr3 (141-205)||(22003881-22003945)
chr3 (141-205)||(22011398-22011462)
chr3 (139-243)||(28406464-28406568)
chr3 (140-188)||(39341370-39341418)
chr3 (150-205)||(379158-379213)
chr3 (150-205)||(8243690-8243745)
chr3 (150-205)||(9440136-9440191)
chr3 (150-205)||(28564943-28564998)
chr3 (196-243)||(42841646-42841693)
chr3 (141-207)||(25113348-25113414)
chr3 (140-186)||(28945760-28945806)
chr3 (139-205)||(51698111-51698177)
chr3 (140-205)||(9190113-9190178)
chr3 (138-243)||(48593189-48593294)
chr3 (153-205)||(335386-335438)
chr3 (175-243)||(8987776-8987844)
chr3 (137-205)||(9465066-9465134)
chr3 (133-205)||(14768183-14768255)
chr3 (150-194)||(19202258-19202302)
chr3 (137-205)||(23825234-23825302)
chr3 (141-205)||(26123075-26123139)
chr3 (140-204)||(28406553-28406617)
chr3 (141-205)||(40214899-40214963)
[»] chr1 (44 HSPs)
chr1 (139-243)||(14281587-14281691)
chr1 (138-243)||(38830479-38830584)
chr1 (139-243)||(23398077-23398181)
chr1 (139-243)||(2352306-2352410)
chr1 (137-240)||(9301969-9302072)
chr1 (141-243)||(28989271-28989373)
chr1 (141-243)||(29312438-29312540)
chr1 (151-240)||(2961154-2961243)
chr1 (151-240)||(10380440-10380529)
chr1 (153-243)||(24594965-24595055)
chr1 (150-240)||(45536213-45536303)
chr1 (150-243)||(28359118-28359211)
chr1 (156-243)||(40161220-40161307)
chr1 (139-243)||(7796137-7796241)
chr1 (139-243)||(9548669-9548773)
chr1 (139-243)||(26550334-26550438)
chr1 (139-239)||(34718888-34718988)
chr1 (153-240)||(1674022-1674109)
chr1 (140-243)||(10065302-10065405)
chr1 (156-243)||(33325347-33325434)
chr1 (170-243)||(26545025-26545098)
chr1 (140-243)||(30264821-30264924)
chr1 (150-240)||(26733793-26733883)
chr1 (153-225)||(23537386-23537458)
chr1 (156-243)||(15289787-15289874)
chr1 (157-243)||(6784674-6784760)
chr1 (153-243)||(46320201-46320286)
chr1 (140-205)||(2352394-2352459)
chr1 (140-193)||(9548769-9548822)
chr1 (140-205)||(10065253-10065318)
chr1 (141-205)||(10380389-10380453)
chr1 (141-205)||(23398165-23398229)
chr1 (156-240)||(24463304-24463387)
chr1 (140-207)||(1673970-1674037)
chr1 (153-188)||(2512422-2512457)
chr1 (146-205)||(40161177-40161236)
chr1 (141-207)||(7796089-7796155)
chr1 (151-205)||(14281675-14281729)
chr1 (139-205)||(28359068-28359134)
chr1 (140-205)||(2961102-2961167)
chr1 (140-205)||(26550285-26550350)
chr1 (141-205)||(9301918-9301982)
chr1 (141-205)||(26545082-26545146)
chr1 (141-205)||(38830568-38830632)
[»] chr2 (45 HSPs)
chr2 (141-243)||(16241314-16241416)
chr2 (141-243)||(25891991-25892093)
chr2 (139-243)||(6761462-6761566)
chr2 (138-243)||(18452565-18452670)
chr2 (139-243)||(43657972-43658076)
chr2 (140-243)||(29866080-29866183)
chr2 (141-243)||(41260024-41260126)
chr2 (140-240)||(13775709-13775809)
chr2 (141-243)||(20427000-20427102)
chr2 (150-240)||(40430716-40430806)
chr2 (141-243)||(44737330-44737431)
chr2 (138-243)||(11711371-11711476)
chr2 (138-243)||(42263517-42263622)
chr2 (155-243)||(11363045-11363133)
chr2 (148-243)||(32880913-32881008)
chr2 (150-243)||(2100025-2100118)
chr2 (138-243)||(30864722-30864827)
chr2 (151-243)||(7765841-7765933)
chr2 (156-243)||(1944581-1944668)
chr2 (153-243)||(32197387-32197477)
chr2 (150-243)||(38598464-38598557)
chr2 (139-243)||(32750389-32750493)
chr2 (155-243)||(45065627-45065715)
chr2 (164-243)||(42341640-42341719)
chr2 (141-243)||(4740709-4740811)
chr2 (155-243)||(3264935-3265019)
chr2 (140-213)||(39377834-39377907)
chr2 (134-243)||(41205537-41205646)
chr2 (177-243)||(22857851-22857917)
chr2 (150-210)||(39377911-39377971)
chr2 (134-205)||(7765786-7765857)
chr2 (139-205)||(32750339-32750405)
chr2 (139-205)||(44737280-44737346)
chr2 (140-205)||(6761550-6761615)
chr2 (179-240)||(33913188-33913249)
chr2 (141-210)||(38598536-38598605)
chr2 (141-205)||(16241266-16241330)
chr2 (151-210)||(12486072-12486131)
chr2 (213-243)||(20360515-20360545)
chr2 (156-214)||(27182089-27182147)
chr2 (156-214)||(27831631-27831689)
chr2 (148-205)||(11711330-11711387)
chr2 (141-210)||(27596729-27596798)
chr2 (140-205)||(40430664-40430729)
chr2 (134-186)||(30864660-30864712)
[»] chr8 (43 HSPs)
chr8 (141-242)||(2229118-2229219)
chr8 (140-243)||(2339288-2339391)
chr8 (141-243)||(33642457-33642559)
chr8 (150-243)||(22781890-22781983)
chr8 (139-243)||(25847964-25848068)
chr8 (141-240)||(29563657-29563756)
chr8 (140-243)||(30923968-30924071)
chr8 (141-243)||(11293234-11293336)
chr8 (141-243)||(34028382-34028484)
chr8 (139-240)||(27793194-27793295)
chr8 (155-243)||(40465285-40465373)
chr8 (164-243)||(43135066-43135145)
chr8 (153-243)||(7668202-7668292)
chr8 (153-241)||(34157671-34157760)
chr8 (150-243)||(37564678-37564771)
chr8 (135-243)||(41915587-41915695)
chr8 (141-243)||(3799763-3799866)
chr8 (153-240)||(32159084-32159171)
chr8 (153-243)||(41569143-41569233)
chr8 (159-243)||(8242240-8242324)
chr8 (150-241)||(12270105-12270196)
chr8 (141-232)||(45145868-45145959)
chr8 (141-243)||(33837579-33837681)
chr8 (150-243)||(40834143-40834237)
chr8 (157-243)||(42189818-42189904)
chr8 (150-240)||(42351248-42351338)
chr8 (150-243)||(43295110-43295202)
chr8 (156-243)||(25878219-25878305)
chr8 (152-243)||(29916537-29916628)
chr8 (137-205)||(2229065-2229133)
chr8 (141-207)||(25848050-25848116)
chr8 (140-205)||(41915679-41915744)
chr8 (138-205)||(11293183-11293250)
chr8 (196-243)||(16928888-16928935)
chr8 (138-205)||(40465234-40465301)
chr8 (141-204)||(45145951-45146014)
chr8 (139-205)||(43135129-43135195)
chr8 (140-205)||(2339375-2339440)
chr8 (140-205)||(32159032-32159097)
chr8 (133-205)||(29563743-29563815)
chr8 (141-205)||(30923920-30923984)
chr8 (133-205)||(34028468-34028540)
chr8 (149-207)||(7668274-7668332)
[»] chr7 (30 HSPs)
chr7 (139-243)||(12763226-12763330)
chr7 (141-243)||(23248715-23248817)
chr7 (140-243)||(34281716-34281819)
chr7 (150-240)||(30866253-30866343)
chr7 (150-243)||(3411340-3411433)
chr7 (140-240)||(5909521-5909621)
chr7 (141-240)||(5347773-5347871)
chr7 (140-243)||(12426577-12426680)
chr7 (141-240)||(35427709-35427808)
chr7 (137-243)||(10599363-10599469)
chr7 (141-243)||(20397814-20397916)
chr7 (138-243)||(19979541-19979646)
chr7 (156-243)||(32050127-32050214)
chr7 (141-243)||(7463448-7463550)
chr7 (170-243)||(29770350-29770423)
chr7 (150-243)||(6173947-6174037)
chr7 (150-243)||(7107638-7107731)
chr7 (141-241)||(15074621-15074716)
chr7 (151-243)||(46680876-46680968)
chr7 (152-243)||(12085071-12085162)
chr7 (138-205)||(7107715-7107782)
chr7 (137-243)||(17351519-17351624)
chr7 (139-205)||(12763314-12763380)
chr7 (153-243)||(26563932-26564022)
chr7 (140-205)||(20397900-20397965)
chr7 (140-188)||(5909469-5909517)
chr7 (150-206)||(12085032-12085088)
chr7 (155-243)||(46449825-46449913)
chr7 (140-207)||(23248666-23248733)
chr7 (141-207)||(34281668-34281734)
[»] chr6 (29 HSPs)
chr6 (139-243)||(7405441-7405545)
chr6 (139-243)||(885649-885753)
chr6 (141-243)||(390852-390954)
chr6 (141-243)||(31971077-31971179)
chr6 (139-243)||(6047843-6047947)
chr6 (138-237)||(22898849-22898948)
chr6 (140-243)||(24949678-24949781)
chr6 (141-240)||(34639090-34639189)
chr6 (139-241)||(33859487-33859589)
chr6 (141-243)||(766474-766576)
chr6 (153-243)||(17225290-17225380)
chr6 (138-236)||(22880914-22881012)
chr6 (152-243)||(6801598-6801689)
chr6 (152-243)||(30686554-30686645)
chr6 (139-243)||(6045728-6045832)
chr6 (156-243)||(8558961-8559047)
chr6 (155-236)||(13144263-13144344)
chr6 (141-243)||(14931257-14931354)
chr6 (139-205)||(24949628-24949694)
chr6 (177-243)||(36363-36429)
chr6 (152-210)||(1158325-1158383)
chr6 (139-205)||(7405529-7405595)
chr6 (140-205)||(885600-885665)
chr6 (152-205)||(8558924-8558977)
chr6 (140-205)||(14931338-14931403)
chr6 (137-205)||(33859575-33859643)
chr6 (139-205)||(31971027-31971093)
chr6 (140-205)||(6047794-6047859)
chr6 (133-205)||(30686629-30686701)
[»] chr5 (49 HSPs)
chr5 (140-243)||(25027692-25027795)
chr5 (140-243)||(37699827-37699930)
chr5 (141-243)||(13144879-13144981)
chr5 (140-243)||(41989562-41989665)
chr5 (141-243)||(29374169-29374271)
chr5 (138-243)||(36419032-36419137)
chr5 (141-243)||(7053647-7053749)
chr5 (141-243)||(7749917-7750019)
chr5 (141-243)||(26898190-26898292)
chr5 (150-243)||(1108291-1108384)
chr5 (139-240)||(1643341-1643442)
chr5 (139-243)||(7945834-7945938)
chr5 (152-243)||(6338362-6338453)
chr5 (140-243)||(15569378-15569481)
chr5 (141-243)||(9601640-9601742)
chr5 (153-243)||(18353255-18353345)
chr5 (141-243)||(31803005-31803107)
chr5 (150-243)||(41046836-41046929)
chr5 (139-243)||(904013-904117)
chr5 (151-243)||(36417094-36417186)
chr5 (140-243)||(20578702-20578805)
chr5 (148-243)||(16089134-16089230)
chr5 (140-243)||(21610348-21610451)
chr5 (140-243)||(23411163-23411266)
chr5 (153-243)||(42311857-42311947)
chr5 (155-243)||(21090423-21090511)
chr5 (156-243)||(6910726-6910813)
chr5 (177-243)||(2825895-2825961)
chr5 (153-243)||(41815196-41815286)
chr5 (150-243)||(2959286-2959379)
chr5 (150-243)||(2967755-2967848)
chr5 (151-243)||(14338824-14338916)
chr5 (140-243)||(38393802-38393905)
chr5 (137-205)||(29374255-29374323)
chr5 (150-205)||(21090384-21090439)
chr5 (147-205)||(7750003-7750061)
chr5 (141-207)||(41815268-41815334)
chr5 (138-207)||(26898274-26898343)
chr5 (153-205)||(2825945-2825997)
chr5 (138-194)||(25027790-25027846)
chr5 (133-205)||(36417038-36417110)
chr5 (141-205)||(37699779-37699843)
chr5 (150-193)||(2959247-2959290)
chr5 (150-193)||(2967716-2967759)
chr5 (150-205)||(9601601-9601656)
chr5 (139-205)||(13144965-13145031)
chr5 (139-205)||(23411250-23411316)
chr5 (141-194)||(31802957-31803010)
chr5 (150-207)||(42311818-42311875)
[»] scaffold0144 (1 HSPs)
scaffold0144 (139-243)||(38822-38926)
[»] scaffold0123 (2 HSPs)
scaffold0123 (141-243)||(29243-29345)
scaffold0123 (150-205)||(29329-29384)
[»] scaffold0002 (1 HSPs)
scaffold0002 (138-243)||(492352-492457)
[»] scaffold2107 (2 HSPs)
scaffold2107 (152-243)||(453-544)
scaffold2107 (139-205)||(528-594)
[»] scaffold0024 (2 HSPs)
scaffold0024 (139-240)||(35951-36052)
scaffold0024 (141-185)||(36059-36103)
[»] scaffold0221 (2 HSPs)
scaffold0221 (139-243)||(11027-11131)
scaffold0221 (141-205)||(11115-11179)
[»] scaffold0592 (1 HSPs)
scaffold0592 (156-243)||(393-480)
[»] scaffold0007 (2 HSPs)
scaffold0007 (139-243)||(77392-77495)
scaffold0007 (141-205)||(77344-77408)
[»] scaffold0246 (2 HSPs)
scaffold0246 (152-243)||(15165-15255)
scaffold0246 (147-194)||(15250-15297)
[»] scaffold0067 (2 HSPs)
scaffold0067 (155-243)||(5229-5317)
scaffold0067 (146-207)||(5299-5360)
[»] scaffold0009 (1 HSPs)
scaffold0009 (156-243)||(3678-3774)
[»] scaffold0005 (1 HSPs)
scaffold0005 (132-210)||(54646-54724)


Alignment Details
Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39054734 - 39054875
Alignment:
Q  1 aaggacaacttataaggatgttgattaagctcatcaatgcaaagaacacaatggaaattggtgtctacactggttattctcttctctccactgctcttgc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39054734 aaggacaacttataaggatgttgattaagctcatcaatgcaaagaacacaatggaaattggtgtctacactggttactctcttctctccactgctcttgc 39054833  T
Q  101 tcttccttctgatggaaaggtaaggctcaaccttataaaata 142  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  39054834 tcttccttctgatggaaaggtaaggctcgaccttataaaata 39054875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 39049239 - 39049375
Alignment:
Q  1 aaggacaacttataaggatgttgattaagctcatcaatgcaaagaacacaatggaaattggtgtctacactggttattctcttctctccactgctcttgc 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||| || ||||| ||| |||||||||||||    
T  39049239 aaggacaacttataagcatgttgatcaagctcatcaatgcaaagaacacgttggaaattggtgtctacactggctactctctactcaccactgctcttgc 39049338  T
Q  101 tcttccttctgatggaaaggtaaggctcaaccttata 137  Q
    ||||||||||||||||||||||| |||| | ||||||    
T  39049339 tcttccttctgatggaaaggtaaagctccaacttata 39049375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 39236703 - 39236838
Alignment:
Q  1 aaggacaacttataaggatgttgattaagctcatcaatgcaaagaacacaatggaaattggtgtctacactggttattctcttctctccactgctcttgc 100  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||  | ||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  39236703 aaggacaacttataagcatgttggttaagcttatcaatgcaaagaacacgttagaaattggtgtgtacactggttactctctgctctccactgcccttgc 39236802  T
Q  101 tcttccttctgatggaaaggtaaggctcaaccttat 136  Q
    |||||| ||||||||||||||||||||| |||||||    
T  39236803 tcttccctctgatggaaaggtaaggctccaccttat 39236838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 39292057 - 39291945
Alignment:
Q  24 attaagctcatcaatgcaaagaacacaatggaaattggtgtctacactggttattctcttctctccactgctcttgctcttccttctgatggaaaggtaa 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||| ||||||||||||||||    
T  39292057 attaagctcatcaatgcaaagaacacaatggaaattggtgtctacacaggttactctttgctctccactgctcttgctcttccctctgatggaaaggtaa 39291958  T
Q  124 ggctcaaccttat 136  Q
     |||| |||||||    
T  39291957 agctccaccttat 39291945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 36099485 - 36099588
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36099485 atactacctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattat 36099584  T
Q  240 tcaa 243  Q
    ||||    
T  36099585 tcaa 36099588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 18135462 - 18135360
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  18135462 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattatt 18135363  T
Q  241 caa 243  Q
    |||    
T  18135362 caa 18135360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 53621478 - 53621375
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  53621478 atactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttcattagatacatacattat 53621379  T
Q  240 tcaa 243  Q
    ||||    
T  53621378 tcaa 53621375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 4758934 - 4758824
Alignment:
Q  133 ttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacat 232  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||||||||| |||||||||||    
T  4758934 ttatcaaatactacctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttaactagatacat 4758835  T
Q  233 acattattcaa 243  Q
    |||||||||||    
T  4758834 acattattcaa 4758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 49122669 - 49122567
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  49122669 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttaactagatacatacattatt 49122570  T
Q  241 caa 243  Q
    |||    
T  49122569 caa 49122567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 18430399 - 18430302
Alignment:
Q  146 ccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18430399 ccttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaa 18430302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 38688066 - 38687958
Alignment:
Q  135 ataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatac 234  Q
    |||||||||| ||| ||||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||    
T  38688066 ataaaatactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtac 38687967  T
Q  235 attattcaa 243  Q
    |||||||||    
T  38687966 attattcaa 38687958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 5970433 - 5970326
Alignment:
Q  136 taaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacataca 235  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  5970433 taaaatactccttccggtcctatttacaagagacaatttactttttagacacattaaataatttatgtatttggtttaggttcttgactagatacataca 5970334  T
Q  236 ttattcaa 243  Q
    ||||||||    
T  5970333 ttattcaa 5970326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 23125644 - 23125747
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  23125644 atactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattat 23125743  T
Q  240 tcaa 243  Q
    ||||    
T  23125744 tcaa 23125747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 35328947 - 35329040
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||| | ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35328947 cggtcctatttacaaaaaataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 35329040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 580562 - 580458
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||||||| |||||| |||||||||||||    
T  580562 aatactacctccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacatta 580463  T
Q  239 ttcaa 243  Q
    |||||    
T  580462 ttcaa 580458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 47948937 - 47949040
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||||| | |||||| |||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  47948937 atactacctccagtcctacttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattat 47949036  T
Q  240 tcaa 243  Q
    ||||    
T  47949037 tcaa 47949040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 31227279 - 31227369
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31227279 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 31227369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 2279533 - 2279622
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2279533 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattatt 2279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 31854519 - 31854426
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  31854519 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaa 31854426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 7350345 - 7350253
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| ||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  7350345 ggtcatatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaa 7350253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 2411990 - 2411887
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||||| ||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  2411990 atactcccttcagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattat 2411891  T
Q  240 tcaa 243  Q
    ||||    
T  2411890 tcaa 2411887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 2385348 - 2385242
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||||||| |||  |||||||||||||||||| |||||| |||||||||||| | ||| |||||||||||| |||||| |||||||||||||||||||||    
T  2385348 aaaatactccctctggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacat 2385249  T
Q  237 tattcaa 243  Q
    |||||||    
T  2385248 tattcaa 2385242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 39877402 - 39877504
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||| |  |||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  39877402 tactccctccggtcctatttacaagaaacgatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 39877501  T
Q  241 caa 243  Q
    |||    
T  39877502 caa 39877504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 19485569 - 19485673
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| | ||||||||||||||| | ||||||||||||| ||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19485569 aatactccctcctgtcctatttacaagaaacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacatta 19485668  T
Q  239 ttcaa 243  Q
    |||||    
T  19485669 ttcaa 19485673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 3086021 - 3085919
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||| ||| ||||||| ||||||||||||||    
T  3086021 tactccctccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttatgttattgactaaatacatacattatt 3085922  T
Q  241 caa 243  Q
    |||    
T  3085921 caa 3085919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 44200121 - 44200019
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||| ||| |||||||||| ||||||||||    
T  44200121 tactccctccggtcttatttacaagagacaatttactttttagatacactaaataatttatgtatttggtttagattcctgactagatatatacattatt 44200022  T
Q  241 caa 243  Q
    |||    
T  44200021 caa 44200019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 53303744 - 53303837
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| || |||||| |||||||||||| | ||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  53303744 cggtcctatttacaagtgacaatttattttttagatacactaaataatttatgtatttggtttagattcttgactaaatacatacattattcaa 53303837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 51833020 - 51833112
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattca 242  Q
    ||||||||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||||||| || ||| ||||||||||||    
T  51833020 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgaataaatatatacattattca 51833112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 6246616 - 6246706
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| |||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||| | ||||||| ||||||    
T  6246616 cggttctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgaccaaatacatatattatt 6246706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 39834273 - 39834375
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||| ||||||||||||| |||||| |||||||||||| | ||| |||||| ||||| |||||||||||||| |||||||||||||||||    
T  39834273 tactccctccggtcttatttacaagagacaatttattttttagatacattaaataatttatatattttgtttaggttcttgattagatacatacattatt 39834372  T
Q  241 caa 243  Q
    |||    
T  39834373 caa 39834375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 56216247 - 56216335
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||| | ||||| |||| |||||||||||||||||    
T  56216247 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaa 56216335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 21221128 - 21221218
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| | | ||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  21221128 gtcctatttacaaaa-acaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatatattattcaa 21221218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 20688455 - 20688517
Alignment:
Q  181 tagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20688455 tagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 20688517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 55292249 - 55292159
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| | |||||| |||||||||||| | ||| ||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  55292249 tcctatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaa 55292159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 52536091 - 52535998
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | |||| |||||||| ||||| | ||| ||||||||||||| |||||||| || ||||||||||||||||||||||    
T  52536091 cggtcctatttacaagatacaattaactttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaa 52535998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 21229221 - 21229326
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| | ||| ||||||||||| | ||||||   |||| ||||| | ||| |||||||||||||||||||||||||||||| |||||||||||    
T  21229221 aaatactccctccagtcttatttacaagaaacaatttatcatttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacatt 21229320  T
Q  238 attcaa 243  Q
    ||||||    
T  21229321 attcaa 21229326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 15171017 - 15170930
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||| | | ||||||||||||||||||| ||||| ||||||||||||| |||| |||||||| ||| |||||| |||||||||    
T  15171017 tatttacaaaaaacaatttactttttagatacattgaataatttatgtatttgatttatgttcttgattagttacatatattattcaa 15170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 27006515 - 27006586
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgac 223  Q
    ||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||    
T  27006515 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttagattcttgac 27006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 38046624 - 38046711
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||||||| |||| ||||| |   ||| ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  38046624 tatttacaagagataatttatttttcagatatataaaataatttatgtatttggtttagatttttgactaaatacatacattattcaa 38046711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 4698634 - 4698724
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| ||||||||| | |||| | |||||||||||| ||||| |||||||||| |||||||| |||| ||| | ||||||| |||||||||    
T  4698634 tcctttttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaa 4698724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 20688567 - 20688501
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  20688567 aatactacctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 20688501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 43413681 - 43413589
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| |||||||||||| | |||| | |||||||||| | || || |||||||||| |||||||| ||| |||||| |||||||||||||||||    
T  43413681 cggttctatttacaagaaacaattgattttttagatatattggat-atttatgtatctggtttagattcatgactacatacatacattattcaa 43413589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 4758774 - 4758840
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  4758774 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 4758840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 6246758 - 6246688
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| | ||| || ||||||||||||    
T  6246758 atactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggt 6246688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 32517863 - 32517817
Alignment:
Q  197 tttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||    
T  32517863 tttatgtatttgatttagattcttgactagatacatatattattcaa 32517817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 2385193 - 2385258
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  2385193 atactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 2385258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 19485722 - 19485657
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| |||| | |||||||||||| ||||| || |||||||    
T  19485722 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtat 19485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 31227421 - 31227356
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||||||||||||||||||||||| | || |||||||||||||| | ||| || |||||||    
T  31227421 atactcccttcggtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtat 31227356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 53621326 - 53621391
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  53621326 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 53621391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 54611982 - 54612043
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtt 211  Q
    |||| ||||||| |||| | ||||||||||||||||||| | ||| ||||||||||||||||    
T  54611982 cggttctatttataagacacaatttactttttagatacattaaataatttatgtatttggtt 54612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 33454017 - 33453977
Alignment:
Q  33 atcaatgcaaagaacacaatggaaattggtgtctacactgg 73  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  33454017 atcaatgctaagaacaccatggaaattggtgtctacactgg 33453977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 37835451 - 37835383
Alignment:
Q  54 gaaattggtgtctacactggttattctcttctctccactgctcttgctcttccttctgatggaaaggta 122  Q
    |||||||| |||| ||||||||||||||||||  | || |||||||||||||||| ||| || ||||||    
T  37835451 gaaattggagtcttcactggttattctcttcttgctacagctcttgctcttccttttgacggcaaggta 37835383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 55292108 - 55292164
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaat 194  Q
    ||||||| ||| ||||||||||||||||||| | || |||||||||||||| |||||    
T  55292108 aaatacttcctccggtcctatttacaagagaaatttgactttttagatacattgaat 55292164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 580407 - 580474
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||| ||| || |||||||||||||||| |||| |||||||||||||  ||||| || |||||||    
T  580407 aaatactccctccgatcctatttacaagagaaaattgactttttagatacgttgaataatgtatgtat 580474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 29833359 - 29833312
Alignment:
Q  196 atttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| |||||||||||||||| ||||||| ||| |||||    
T  29833359 atttatgtatttgatttaggttcttgactaaatacatatattcttcaa 29833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 4698760 - 4698670
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| | | |||| | |||||||||||| ||||| |||||||||| |||| |||  |||  || ||||||||| |||||||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaa 4698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 14785006 - 14785084
Alignment:
Q  132 cttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    |||| |||||||| ||| || ||||||||||| || |||||| |||||| ||||||| ||||| ||||| |||| ||||    
T  14785006 cttaaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 14785084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 36099638 - 36099572
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || | |||||||||||| ||||| || |||||||    
T  36099638 aatactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtat 36099572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 53225794 - 53225724
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    ||||| ||| |||||||||||| |||| | |||| ||||||||||| || ||||| ||| |||||||||||    
T  53225794 atactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggt 53225724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 5970277 - 5970342
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| |||||||||||||||| || ||| | || |||||||||||||| ||||| || |||||||    
T  5970277 atactcccttcggtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtat 5970342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 15170880 - 15170945
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgta 204  Q
    |||||| ||| ||||| ||||||||||||| |||| |||||||| ||||| ||||| || ||||||    
T  15170880 aatactccctccggtcttatttacaagagaaaattgactttttaaatacattgaataatatatgta 15170945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 29833273 - 29833330
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    ||||||||||||||||| | |||| |||||||||||||| ||||  || |||||||||    
T  29833273 cggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtattt 29833330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 2643614 - 2643670
Alignment:
Q  148 ttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgta 204  Q
    |||||||||||||| |||| |||||| ||||||||| | || ||||| |||||||||    
T  2643614 ttcggtcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 10049665 - 10049769
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10049665 aatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacatta 10049764  T
Q  239 ttcaa 243  Q
    |||||    
T  10049765 ttcaa 10049769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 6087049 - 6086948
Alignment:
Q  142 actaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattc 241  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6087049 actacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattc 6086950  T
Q  242 aa 243  Q
    ||    
T  6086949 aa 6086948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 8243833 - 8243729
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8243833 aatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacatta 8243734  T
Q  239 ttcaa 243  Q
    |||||    
T  8243733 ttcaa 8243729  T

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Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 9440277 - 9440175
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  9440277 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattatt 9440178  T
Q  241 caa 243  Q
    |||    
T  9440177 caa 9440175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 26999020 - 26999122
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26999020 tactacctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 26999119  T
Q  241 caa 243  Q
    |||    
T  26999120 caa 26999122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 14768096 - 14768199
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  14768096 atactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattat 14768195  T
Q  240 tcaa 243  Q
    ||||    
T  14768196 tcaa 14768199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 25846661 - 25846558
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||| | ||||||||||||||||||| ||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25846661 atactacttccggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattat 25846562  T
Q  240 tcaa 243  Q
    ||||    
T  25846561 tcaa 25846558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 49122952 - 49123045
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  49122952 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggctcttgactagatacatacattattcaa 49123045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 28565086 - 28564982
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||| || | ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  28565086 aatactcccttcggtcctatttacaagagacaatttattttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacatta 28564987  T
Q  239 ttcaa 243  Q
    |||||    
T  28564986 ttcaa 28564982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 47449927 - 47450014
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47449927 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 47450014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 52114162 - 52114071
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52114162 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaa 52114071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 9465220 - 9465118
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||||   ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  9465220 tactccctccggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattatt 9465121  T
Q  241 caa 243  Q
    |||    
T  9465120 caa 9465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 29019734 - 29019836
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  29019734 tactccctccggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattatt 29019833  T
Q  241 caa 243  Q
    |||    
T  29019834 caa 29019836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 335515 - 335422
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||| | | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  335515 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 335422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 28945654 - 28945754
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  28945654 atactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagaaacatacattat 28945753  T
Q  240 t 240  Q
    |    
T  28945754 t 28945754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 21653482 - 21653391
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| ||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  21653482 gtcctatttacaagagacaatttactttttagatacattaaataatttatgcatttggtttaggttcttgactagatatatacattattcaa 21653391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 19202399 - 19202297
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||| | | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  19202399 tactccctccggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacataccttatt 19202300  T
Q  241 caa 243  Q
    |||    
T  19202299 caa 19202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 18765398 - 18765305
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | |||||||||||||||| || | ||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  18765398 cggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaa 18765305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 25113489 - 25113396
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| |||||||||||| |||||| | ||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  25113489 cggtcctatttacaagagacaatttactttttcgatacattaaataatttatgtatttggtttaggttcttgattaaatacatacattattcaa 25113396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 40464517 - 40464623
Alignment:
Q  141 tactaccttcggtcctatttac----aagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||||||| |||||||||||||    |||||| ||||||||||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||    
T  40464517 tactacctccggtcctatttacttacaagagacaatttactttttagataaattaaataatttatgtatttggtttaggttcttgactagatacatacat 40464616  T
Q  237 tattcaa 243  Q
    |||||||    
T  40464617 tattcaa 40464623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 42605978 - 42605874
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| |||||||| |||||||||| |||||||||||||||||||   ||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  42605978 aatactccctccggtcctacttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaagttcttgactagatacatacatta 42605879  T
Q  239 ttcaa 243  Q
    |||||    
T  42605878 ttcaa 42605874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 9190023 - 9190129
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||||||| |||||| || |||||||||||||  |||||||||| ||||||| | ||| ||||||||||||||||||  |||||||||||||||||||||    
T  9190023 aaaatacttccttcgatcatatttacaagagacgatttacttttaagatacattaaataatttatgtatttggtttaaattcttgactagatacatacat 9190122  T
Q  237 tattcaa 243  Q
    |||||||    
T  9190123 tattcaa 9190129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 23825160 - 23825250
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| | |||||||||||||||||||   ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23825160 tcctatttacaagaaacaatttactttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaa 23825250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 40215050 - 40214951
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| |||||||||||| |||||| || |||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  40215050 atactccctccggtcctatttataagagacaagttactttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattat 40214951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 51698251 - 51698164
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| |||| | |||||||||||||||||||    
T  51698251 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcattactagatacatacattatt 51698164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 40142026 - 40141930
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatac 234  Q
    ||||||| ||||| ||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||  |||||||||| ||||||||    
T  40142026 aaatacttccttcagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaaattcttgactaaatacatac 40141930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 42225711 - 42225609
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||| ||||||||| | | |||||||||||| |||||| | ||| |||||||||||| ||||||||| ||||||||||||||||||||||    
T  42225711 tactccctccggtcttatttacaaaaaacaatttacttttttgatacattaaataatttatgtatttagtttaggttattgactagatacatacattatt 42225612  T
Q  241 caa 243  Q
    |||    
T  42225611 caa 42225609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 8825740 - 8825832
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| |||||||||||||  | |||||||||||||| | | ||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  8825740 ggtcttatttacaagagacgaattactttttagatatattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaa 8825832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 379069 - 379174
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttag---gttcttgactagatacatacatt 237  Q
    |||| ||| ||||||||||||||||||| |||| | |||||||||||| | ||| |||||||||||||||||||   | ||||||||||||||||| |||    
T  379069 tactccctccggtcctatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagattgatcttgactagatacataaatt 379168  T
Q  238 attcaa 243  Q
    ||||||    
T  379169 attcaa 379174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 1122305 - 1122376
Alignment:
Q  172 tttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | ||| ||||||||||||  |||||||||||||||||||||||||||| |||||    
T  1122305 tttactttttagatacattaaataatttatgtatttattttaggttcttgactagatacatacattcttcaa 1122376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 22003811 - 22003897
Alignment:
Q  157 atttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| |||| | |||||||||||| ||||| |||||| ||||| |||||| ||||| |||||||||||| |||||||||    
T  22003811 atttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaa 22003897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 22011328 - 22011414
Alignment:
Q  157 atttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| |||| | |||||||||||| ||||| |||||| ||||| |||||| ||||| |||||||||||| |||||||||    
T  22011328 atttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaa 22011414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 13826120 - 13826213
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| |  ||||||||||||  |||| | ||| ||||||| ||||| |||||||||||||||| ||||||||||| |||||    
T  13826120 cggtcctatttacaagaaacgatttactttttatttacattaaataatttatgaatttgatttaggttcttgactaaatacatacattcttcaa 13826213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 44593336 - 44593248
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||| |  ||||||| |||||||||||| | ||| |||||||||||||||||| ||| |||| |||||||||| |||||||||    
T  44593336 ctatttacaaaaagtaatttaatttttagatacattaaataatttatgtatttggtttaagtttttgattagatacatatattattcaa 44593248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 39341512 - 39341425
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||| |||  |||| ||||||||| | | ||| |||||| |||||| ||||| |||||||||||||||||||||||||    
T  39341512 tcctatttacaagaaatacgttacattttagatatattaaataatttatatatttgatttagattcttgactagatacatacattatt 39341425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 3484342 - 3484412
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttga 222  Q
    ||||||||||||||||| |||| | |||||||||||| | |||  |||||||||||||||||| |||||||    
T  3484342 gtcctatttacaagagacaattaattttttagatacattaaatagtttatgtatttggtttagattcttga 3484412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 10049818 - 10049753
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  10049818 atactccctccggtcctatttacaagagacaattgactttttagatacattgaataatgtatgtat 10049753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 16660414 - 16660334
Alignment:
Q  158 tttacaagagataatttactttttagatacaatgaatca--tttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||| ||||||  |||||||||||||||||| | ||| |  ||||||||||||||||||||| ||||||| ||||||||||    
T  16660414 tttagaagagacgatttactttttagatacattaaataaaatttatgtatttggtttaggttgttgactaaatacatacat 16660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 26123046 - 26123091
Alignment:
Q  198 ttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||    
T  26123046 ttatgcatttggtttaggtttttgactagatacatacattattcaa 26123091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 29019885 - 29019820
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||||| ||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  29019885 atactcccttcagtcctatttacaagagaaaattgactttttagatacattgaataatatatgtat 29019820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 55139201 - 55139274
Alignment:
Q  170 aatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| |||||||||||||| ||||| ||||||||||||| ||||  |||||||| | ||||||| |||||||||    
T  55139201 aattgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaa 55139274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 1122418 - 1122372
Alignment:
Q  147 cttcggtcctatttacaagagataatttactttttagatacaatgaa 193  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  1122418 cttcggtcctatttacaagagaaaattgactttttagatacattgaa 1122372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 26999172 - 26999106
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  26999172 aatactccctccggtcctatttacaagagacatttgactttttagatacattgaataatgtatgtat 26999106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 6086899 - 6086964
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  6086899 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 6086964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 22003945 - 22003881
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| |||||||||||| || ||| |||| |||||||||||||| ||||| ||||||||||    
T  22003945 tacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtat 22003881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 22011462 - 22011398
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| |||||||||||| || ||| |||| |||||||||||||| ||||| ||||||||||    
T  22011462 tacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtat 22011398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 28406464 - 28406568
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||||||||||||| | |||| ||||||||||| |  ||||| ||| ||||||||||| ||  |||| |||  | |||||| ||||    
T  28406464 aatactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaatta 28406563  T
Q  239 ttcaa 243  Q
    |||||    
T  28406564 ttcaa 28406568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 39341370 - 39341418
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagataca 188  Q
    ||||| ||| ||||||||||||||||||| |||| ||||||||||||||    
T  39341370 atactccctccggtcctatttacaagagaaaattgactttttagataca 39341418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 379213 - 379158
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||||||| |||||| | || |||||||||||||| ||||| ||||||||||    
T  379213 cggtcctatttataagagaaagttgactttttagatacattgaataatttatgtat 379158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 8243690 - 8243745
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  8243690 cggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtat 8243745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 9440136 - 9440191
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  9440136 cggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 9440191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 28564943 - 28564998
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||||||| |||| |||||||| ||||| ||||| || |||||||    
T  28564943 cggtcctatttacaagagaaaattgactttttatatacattgaataatgtatgtat 28564998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 42841693 - 42841646
Alignment:
Q  196 atttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| |||||| ||||| |||||||| |||||||||||||    
T  42841693 atttatgtatttagtttagattcttaactagatatatacattattcaa 42841646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 25113348 - 25113414
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||| ||| |||||||||||| |||||| | || |||||||||||||| ||||| || |||||||||    
T  25113348 tacttcctccggtcctatttataagagaaagttgactttttagatacattgaataatgtatgtattt 25113414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 28945806 - 28945760
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagata 186  Q
    ||||| ||| ||||||||||||||||||| |||| ||||||||||||    
T  28945806 atactccctccggtcctatttacaagagaaaattgactttttagata 28945760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 51698111 - 51698177
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || |||||||||||||| | ||| || |||||||    
T  51698111 aatactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtat 51698177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 9190178 - 9190113
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| |||||| ||||||||| |||||| | || |||||||||||||| ||||| || |||||||    
T  9190178 atactcccttcgatcctatttataagagaaagttgactttttagatacattgaataatgtatgtat 9190113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 48593294 - 48593189
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| ||||||||| ||||||| | || | | ||||||||| || ||||| ||||||||||||||| ||  |||| |||  |||||||  |||    
T  48593294 aaatactccctccggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaatt 48593195  T
Q  238 attcaa 243  Q
    ||||||    
T  48593194 attcaa 48593189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 335386 - 335438
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  335386 tcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 335438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 8987844 - 8987776
Alignment:
Q  175 actttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| | ||| ||||||||||||||||||  |||| ||| | |||||||  ||||||||    
T  8987844 actttttagatacattcaataatttatgtatttggtttaaattctagaccaaatacataagttattcaa 8987776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 9465066 - 9465134
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||  || ||||||||||||||||| | | || |||||||||||||| ||||| || |||||||    
T  9465066 aaaatactctctccggtcctatttacaagataaagttgactttttagatacattgaataatgtatgtat 9465134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 14768255 - 14768183
Alignment:
Q  133 ttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||| || | ||| ||||||||||||||||||| | || | |||||||||||| ||||| || |||||||    
T  14768255 ttataaactagtccctccggtcctatttacaagagaaagttgattttttagatacattgaataatatatgtat 14768183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 19202258 - 19202302
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaat 194  Q
    ||||||||||||||||||| | || |||||||||||||| |||||    
T  19202258 cggtcctatttacaagagaaagttgactttttagatacattgaat 19202302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 23825302 - 23825234
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||| ||| || || ||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  23825302 aaaatactccctccgatcatatttacaagagaaagttgactttttagatacattgaataatgtatgtat 23825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 26123139 - 26123075
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| |  | |||||||||||||| ||||| || |||||||    
T  26123139 tactccctccggtcctatttacaagagaaagatgactttttagatacattgaataatgtatgtat 26123075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 28406617 - 28406553
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgta 204  Q
    ||||| ||| ||||||||||||||||| | |||| ||||||||| | || ||||| |||||||||    
T  28406617 atactccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 40214899 - 40214963
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| || || || |||||||    
T  40214899 tactccctccggtcctatttacaagagaaagttgactttttagatacattggataatgtatgtat 40214963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 14281587 - 14281691
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14281587 aatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacatta 14281686  T
Q  239 ttcaa 243  Q
    |||||    
T  14281687 ttcaa 14281691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 38830479 - 38830584
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||    
T  38830479 aaatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatatt 38830578  T
Q  238 attcaa 243  Q
    ||||||    
T  38830579 attcaa 38830584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 23398077 - 23398181
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23398077 aatactacctccggtcctatttacaagagacaacttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacatta 23398176  T
Q  239 ttcaa 243  Q
    |||||    
T  23398177 ttcaa 23398181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 2352306 - 2352410
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| | | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  2352306 aatactacctccggtcctatttacaagagacaatttactttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacatta 2352405  T
Q  239 ttcaa 243  Q
    |||||    
T  2352406 ttcaa 2352410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 9302072 - 9301969
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  9302072 aaaatactacctccggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacat 9301973  T
Q  237 tatt 240  Q
    ||||    
T  9301972 tatt 9301969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 28989271 - 28989373
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||||||| |||||||||    
T  28989271 tactcccttcggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacattatt 28989370  T
Q  241 caa 243  Q
    |||    
T  28989371 caa 28989373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 29312438 - 29312540
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  29312438 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattatt 29312537  T
Q  241 caa 243  Q
    |||    
T  29312538 caa 29312540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 2961243 - 2961154
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2961243 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattatt 2961154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 10380529 - 10380440
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  10380529 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattatt 10380440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 24595055 - 24594965
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| ||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  24595055 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacataattcaa 24594965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 45536303 - 45536213
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||| |||| ||||||||||    
T  45536303 cggtcctatttacaagagataatttactttttagatacatcaaataatttatgtatttggtttaggttcttgacttgataaatacattatt 45536213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 28359211 - 28359118
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  28359211 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggttttggttcttgactagatacatatattattcaa 28359118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 40161307 - 40161220
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  40161307 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaa 40161220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 7796241 - 7796137
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||| |||||||||| || |||||| |||||||||||| | ||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  7796241 aatacttcctccggtcatatttacaagtgacaatttattttttagatacattaaataatttatgtatttggtttagattcttgactaaatacatacatta 7796142  T
Q  239 ttcaa 243  Q
    |||||    
T  7796141 ttcaa 7796137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 9548669 - 9548773
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||| ||||||||||||| |||||||| |||||     
T  9548669 aatacttcctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattc 9548768  T
Q  239 ttcaa 243  Q
    |||||    
T  9548769 ttcaa 9548773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 26550438 - 26550334
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||| |||||| |||||| ||||||||||||||| ||| | ||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  26550438 aatactccctccggtcatatttataagagacaatttactttttagaaacattaaataatttatgtatttgctttaggttcttaactagatacatacatta 26550339  T
Q  239 ttcaa 243  Q
    |||||    
T  26550338 ttcaa 26550334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 34718888 - 34718988
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||| || |||||||||||| |||||||    
T  34718888 aatactccctccggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagatttttgactagatacgtacatta 34718987  T
Q  239 t 239  Q
    |    
T  34718988 t 34718988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 1674109 - 1674022
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  1674109 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatt 1674022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 10065405 - 10065302
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| || |||||||||||| | | ||||||||||||||||||| | ||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  10065405 atacttcctccgatcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattat 10065306  T
Q  240 tcaa 243  Q
    ||||    
T  10065305 tcaa 10065302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 33325347 - 33325434
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| |||||| |||||||||||| | ||| |||||||||| |||||||| || |||||||||||||||||||||||||    
T  33325347 tatttacaagagacaatttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaa 33325434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 26545025 - 26545098
Alignment:
Q  170 aatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| || | ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  26545025 aatttactttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaa 26545098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 30264924 - 30264821
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||| | | |  |||||||||||||| | | ||| |||||| ||||||||||||||||||||||||||||||| |||||    
T  30264924 atacttcctccggtcctatttacaataaacatgttactttttagatatattaaataatttatatatttggtttaggttcttgactagatacatatattat 30264825  T
Q  240 tcaa 243  Q
    ||||    
T  30264824 tcaa 30264821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 26733793 - 26733883
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    ||||||||||||||||| | |||| |||||||||||||| | ||| || |||||||||||||||  |||||||||||||||||| ||||||    
T  26733793 cggtcctatttacaagaaacaattaactttttagatacattaaataatctatgtatttggtttatattcttgactagatacataaattatt 26733883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 23537458 - 23537386
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgacta 225  Q
    |||||||||||||||| |||||| |||||||||| | | ||| ||||||||||||||||||||||||||||||    
T  23537458 tcctatttacaagagacaatttattttttagataaattaaataatttatgtatttggtttaggttcttgacta 23537386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 15289787 - 15289874
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||| |||||| |||||  |||||||||||| | ||| |||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  15289787 tatttaaaagagacaatttcttttttagatacattaaataatttatatatttggtttaggttattgactaggtacatacattattcaa 15289874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 6784674 - 6784760
Alignment:
Q  157 atttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||| || | ||||||||||||||||||| | ||| |||||| |||||| || |||||||||| ||||||||||||||||||||    
T  6784674 atttacaggaaacaatttactttttagatacattaaataatttatatatttgattcaggttcttgattagatacatacattattcaa 6784760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 46320286 - 46320201
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| |||||||||||||||||||   ||| ||||||||||||||||||     ||||||||||||||| |||||||||    
T  46320286 tcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggttta-----ttgactagatacatatattattcaa 46320201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 2352459 - 2352394
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  2352459 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 2352394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 9548822 - 9548769
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaa 193  Q
    ||||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||    
T  9548822 atactccctccggtcctatttacaagagaaaattgactttttagatacattgaa 9548769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 10065253 - 10065318
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| |||| | |||||||||||| ||||| || |||||||    
T  10065253 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtat 10065318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 10380389 - 10380453
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| |||| |||||||||||||| | ||| || |||||||    
T  10380389 tacttcctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtat 10380453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 23398229 - 23398165
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||| ||| |||| |||||||||||||| ||||| || |||||||    
T  23398229 tactccctccggtcctatttacaatagacaattgactttttagatacattgaataatgtatgtat 23398165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 24463304 - 24463387
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    ||||||||| ||| |||||| |||||||||| | | ||| |||||| ||||||||||| ||||||||  | ||||||||||||||    
T  24463304 tatttacaaaagacaattta-tttttagatatattaaataatttatatatttggtttatgttcttgatcaaatacatacattatt 24463387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 1673970 - 1674037
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    ||||| ||||||||||||||||||||||| | || ||||| |||||||| | ||| || |||||||||    
T  1673970 atactcccttcggtcctatttacaagagaaagttgactttctagatacattaaataatatatgtattt 1674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 2512422 - 2512457
Alignment:
Q  153 tcctatttacaagagataatttactttttagataca 188  Q
    |||||||||||||||| |||||||||||||||||||    
T  2512422 tcctatttacaagagacaatttactttttagataca 2512457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 40161177 - 40161236
Alignment:
Q  146 ccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||| ||||| || |||||||    
T  40161177 ccttcggtcatatttacaagagaaaattgactttttaaatacattgaataatgtatgtat 40161236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 7796089 - 7796155
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||| ||| ||||||||||||||||||| |||   ||||||||||||| ||||| || |||||||||    
T  7796089 tactccctccggtcctatttacaagagaaaatagtctttttagatacattgaataatgtatgtattt 7796155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 14281729 - 14281675
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  14281729 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 14281675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 28359068 - 28359134
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| |||||||||||||||| |||||| | || | |||||||||||| ||||| || |||||||    
T  28359068 aatactcccttcggtcctatttataagagaaagttgattttttagatacattgaataatatatgtat 28359134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 2961102 - 2961167
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| | ||| || |||||||    
T  2961102 atactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtat 2961167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 26550285 - 26550350
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| || |||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  26550285 atacttcctccgatcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 26550350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 9301918 - 9301982
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| | ||| || |||||||    
T  9301918 tactccctccggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtat 9301982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 26545146 - 26545082
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||| ||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  26545146 tacttcctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtat 26545082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 38830632 - 38830568
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||| ||||| ||||| || |||||||    
T  38830632 tactccctccggtcctatttacaagagacagttgactttttaaatacattgaataatatatgtat 38830568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 16241416 - 16241314
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16241416 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattatt 16241317  T
Q  241 caa 243  Q
    |||    
T  16241316 caa 16241314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 25892093 - 25891991
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25892093 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattatt 25891994  T
Q  241 caa 243  Q
    |||    
T  25891993 caa 25891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 6761462 - 6761566
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6761462 aatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacatta 6761561  T
Q  239 ttcaa 243  Q
    |||||    
T  6761562 ttcaa 6761566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 18452565 - 18452670
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18452565 aaatactacctccagtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacatt 18452664  T
Q  238 attcaa 243  Q
    ||||||    
T  18452665 attcaa 18452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 43658076 - 43657972
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  43658076 aatactcccttcagtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacatta 43657977  T
Q  239 ttcaa 243  Q
    |||||    
T  43657976 ttcaa 43657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 29866080 - 29866183
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29866080 atactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattat 29866179  T
Q  240 tcaa 243  Q
    ||||    
T  29866180 tcaa 29866183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 41260024 - 41260126
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| |||||||||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41260024 tactccctccggtcctatttacaagagacaatttacttttttgatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 41260123  T
Q  241 caa 243  Q
    |||    
T  41260124 caa 41260126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 13775709 - 13775809
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  13775709 atactccctccggtcctatttacaagagataatttactttttagatatattaaataatttatgtatttggtttaggtttttgactagatacatacattat 13775808  T
Q  240 t 240  Q
    |    
T  13775809 t 13775809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 20427000 - 20427102
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||| | | ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  20427000 tactccctccggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattatt 20427099  T
Q  241 caa 243  Q
    |||    
T  20427100 caa 20427102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 40430806 - 40430716
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||| |||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40430806 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 40430716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 44737431 - 44737330
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||| ||||| |||||||||||||||||||    
T  44737431 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgg-ttagattcttaactagatacatacattatt 44737333  T
Q  241 caa 243  Q
    |||    
T  44737332 caa 44737330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 11711476 - 11711371
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||| ||||||| | ||| |||||||||||||  |||||||||||||||||||||||||||    
T  11711476 aaatactccctccggtcctatttacaagagacaatttacttttaagatacattaaataatttatgtatttgacttaggttcttgactagatacatacatt 11711377  T
Q  238 attcaa 243  Q
    ||||||    
T  11711376 attcaa 11711371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 42263622 - 42263517
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| | ||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||    
T  42263622 aaatactccctccagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacatt 42263523  T
Q  238 attcaa 243  Q
    ||||||    
T  42263522 attcaa 42263517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 11363133 - 11363045
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  11363133 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatagatacattattcaa 11363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 32880913 - 32881008
Alignment:
Q  148 ttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| |||||||||||||||| ||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  32880913 ttcgatcctatttacaagagacaatttactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaa 32881008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 2100025 - 2100118
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| |  ||| |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2100025 cggtcctatttacaagagacatgttattttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 2100118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 30864827 - 30864722
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| | ||| ||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||| |||    
T  30864827 aaatactccctccagtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatatt 30864728  T
Q  238 attcaa 243  Q
    ||||||    
T  30864727 attcaa 30864722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 7765933 - 7765841
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||| |||||| ||||||||||||||||||| | ||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  7765933 ggtcctatttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaa 7765841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 1944668 - 1944581
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| || |||||||||||||||| | ||| || |||| ||||||||||||||||||||||||||||||||||||||||    
T  1944668 tatttacaagagacaagttactttttagatacattaaataatatatgaatttggtttaggttcttgactagatacatacattattcaa 1944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 32197387 - 32197477
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||| || | |||||| |||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  32197387 tcctatttacatgaaacaatttattttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaa 32197477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 38598464 - 38598557
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||||| ||||||||||||| ||| | | ||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  38598464 cggtcttatttacaagagacaatttactttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaa 38598557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 32750493 - 32750389
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| || ||||||||||||||||  | |||||||||||||||| |  || ||||||||||||| ||||| |||||||||||||||||||||||    
T  32750493 aatactccctccgatcctatttacaagagacgagttactttttagatacattacataatttatgtatttgatttagattcttgactagatacatacatta 32750394  T
Q  239 ttcaa 243  Q
    |||||    
T  32750393 ttcaa 32750389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 45065715 - 45065627
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| ||||||||||||||||||| | ||| ||||||||||||  ||||| |||| |||||||||||||||||||||||    
T  45065715 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaa 45065627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 42341640 - 42341719
Alignment:
Q  164 agagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||||| ||||| | ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  42341640 agagacaatttactttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaa 42341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 4740709 - 4740811
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||| | |||| |||||||| ||| | | ||| |||||| |||||||| ||||||||||| |||||||||||||||||    
T  4740709 tactccctccggtcctatttacaagaaacaattaactttttatatatattaaataatttatatatttggtataggttcttgattagatacatacattatt 4740808  T
Q  241 caa 243  Q
    |||    
T  4740809 caa 4740811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 3264935 - 3265019
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| ||||||||||||||||||| | ||| ||||||    |||||||| ||||||||||| |||||||||||||||||    
T  3264935 ctatttacaagagacaatttactttttagatacattaaataatttat----ttggtttaagttcttgactaaatacatacattattcaa 3265019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 39377834 - 39377907
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggttta 213  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||||||   ||| ||||||||||||||||||    
T  39377834 atactccctccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggttta 39377907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 243
Target Start/End: Complemental strand, 41205646 - 41205537
Alignment:
Q  134 tataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacata 233  Q
    |||| |||||| |||  ||||||||||| ||||||||||| | |||||||||| | | ||| ||||||||||||||||||  || || ||||||||||||    
T  41205646 tatataatacttcctctggtcctatttataagagataattaattttttagatatattaaataatttatgtatttggtttatattttttactagatacata 41205547  T
Q  234 cattattcaa 243  Q
     |||||||||    
T  41205546 aattattcaa 41205537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 22857917 - 22857851
Alignment:
Q  177 tttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||  ||||||||| |||||||||    
T  22857917 tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaa 22857851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 39377971 - 39377911
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    ||||||||||||||||||| |||||||||||||||||||   ||| |||||||||||||||    
T  39377971 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 7765786 - 7765857
Alignment:
Q  134 tataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  7765786 tataaaatactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 7765857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 32750339 - 32750405
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  32750339 aatactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 32750405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 44737280 - 44737346
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||| ||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  44737280 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtat 44737346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 6761615 - 6761550
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  6761615 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 6761550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 33913188 - 33913249
Alignment:
Q  179 tttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| | | ||| ||||||||||||||||||| |||| |||||||||||||| |||||    
T  33913188 tttagatatattaaataatttatgtatttggtttagattctcgactagatacatacgttatt 33913249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 38598605 - 38598536
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    |||| ||| ||||||||||||||| ||| | ||||||||||||||||| ||||| || ||||||| ||||    
T  38598605 tacttcctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggt 38598536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 16241266 - 16241330
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  16241266 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 16241330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 12486131 - 12486072
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    |||||||||||||||| | |||| ||||||||||| || ||||| ||| |||||||||||    
T  12486131 ggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 20360515 - 20360545
Alignment:
Q  213 aggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||||||||||||||||||    
T  20360515 aggttcttgactagatacatacattattcaa 20360545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 27182089 - 27182147
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttag 214  Q
    ||||||||||| | |||| | |||| ||||||| ||||| |||||||||||||||||||    
T  27182089 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggtttag 27182147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 27831631 - 27831689
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttag 214  Q
    ||||||||||| | |||| | |||| ||||||| ||||| |||||||||||||||||||    
T  27831631 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggtttag 27831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 11711330 - 11711387
Alignment:
Q  148 ttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||| | ||| |||| |||||||||||||| ||||| || |||||||    
T  11711330 ttcggtcctatttacgaaagaaaattgactttttagatacattgaataatgtatgtat 11711387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 27596798 - 27596729
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    |||| ||| ||||||||||||  | |||  ||| |||||||||||||| ||||| |||||||||||||||    
T  27596798 tactccctccggtcctatttatgaaagacgattgactttttagatacattgaataatttatgtatttggt 27596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 40430664 - 40430729
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| |||||| ||||||||| |||||| |||| |||||||||||||| | ||| || |||||||    
T  40430664 atactcccttcgatcctatttataagagaaaattgactttttagatacattcaataatgtatgtat 40430729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 30864660 - 30864712
Alignment:
Q  134 tataaaatactaccttcggtcctatttacaagagataatttactttttagata 186  Q
    |||| |||||| ||| |||||||||| |||||||| |||| ||||||||||||    
T  30864660 tatataatactccctccggtcctattgacaagagaaaattgactttttagata 30864712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 2229219 - 2229118
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2229219 tactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattatt 2229120  T
Q  241 ca 242  Q
    ||    
T  2229119 ca 2229118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 2339288 - 2339391
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2339288 atactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattat 2339387  T
Q  240 tcaa 243  Q
    ||||    
T  2339388 tcaa 2339391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 33642457 - 33642559
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  33642457 tactccctccggtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattatt 33642556  T
Q  241 caa 243  Q
    |||    
T  33642557 caa 33642559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 22781890 - 22781983
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781890 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 22781983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 25847964 - 25848068
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    ||||||| || || |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  25847964 aatactagctccgatcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacatta 25848063  T
Q  239 ttcaa 243  Q
    |||||    
T  25848064 ttcaa 25848068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 29563657 - 29563756
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  29563657 tactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattatt 29563756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 30924071 - 30923968
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||||| |||||||||||| || ||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  30924071 atactacctccggtcctatttataaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattat 30923972  T
Q  240 tcaa 243  Q
    ||||    
T  30923971 tcaa 30923968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 11293336 - 11293234
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11293336 tacttcctccggtcctatttacaagagacaatttactttttaaatacattaaatcatttatgtaaatggtttaggttcttgactagatacatacattatt 11293237  T
Q  241 caa 243  Q
    |||    
T  11293236 caa 11293234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 34028382 - 34028484
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||  | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34028382 tactccctccggtcctatttacaagtaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 34028481  T
Q  241 caa 243  Q
    |||    
T  34028482 caa 34028484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 27793194 - 27793295
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  27793194 aatactcccatcggtcctatttacaagagataatttactttttagatgcattaaataatttatgtatttggtttaggttcttgaccagatatatacatta 27793293  T
Q  239 tt 240  Q
    ||    
T  27793294 tt 27793295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 40465373 - 40465285
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||| |||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40465373 ctatttataagagaaaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 40465285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 43135066 - 43135145
Alignment:
Q  164 agagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43135066 agagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 43135145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 7668202 - 7668292
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  7668202 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaa 7668292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 34157671 - 34157760
Alignment:
Q  153 tcctatttacaagagataatttactttt-tagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattc 241  Q
    |||||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  34157671 tcctatttacaagagataatttacttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattc 34157760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 37564771 - 37564678
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| ||||||||||||| ||||| | ||| ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  37564771 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttaactagatgcatacattattcaa 37564678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 41915587 - 41915695
Alignment:
Q  135 ataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatac 234  Q
    |||| ||||| ||| |||||||||||| |||||| |||||| |||||||||||| | ||| ||||||||||||||||||| || ||||||||||||||||    
T  41915587 ataatatactccctccggtcctatttataagagacaatttaatttttagatacattaaataatttatgtatttggtttagattattgactagatacatac 41915686  T
Q  235 attattcaa 243  Q
    |||||||||    
T  41915687 attattcaa 41915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 3799866 - 3799763
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttacttttt-agatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    |||| ||||||||||||||||||| ||| |||||||||||| | ||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  3799866 tactcccttcggtcctatttacaatagacaatttacttttttaaatacattaaataatttatgtatttggtttagattcttgactagatacatacattat 3799767  T
Q  240 tcaa 243  Q
    ||||    
T  3799766 tcaa 3799763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 32159171 - 32159084
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  32159171 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttagattcttgattagatacatacattatt 32159084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 41569233 - 41569143
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| | ||||||||||||||||| | | ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  41569233 tcctatttacaagaaacaatttactttttagatatattaaataatttatgtatttggttgaggttcttgactagatacatacattattcaa 41569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 8242240 - 8242324
Alignment:
Q  159 ttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||| ||||||||||||| ||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8242240 ttacaagagacaatttactttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaa 8242324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 12270196 - 12270105
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattc 241  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| ||||||||||| ||| ||| |||||||    
T  12270196 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactaaatatatatattattc 12270105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 45145868 - 45145959
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacat 232  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||| ||||||    
T  45145868 tactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtttttggtttaggttcttgactacatacat 45145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 33837579 - 33837681
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| |||| |||||||||||||| ||||||||||||||||||| | ||| ||||||| |||| |||||| |||||||||||||||||| ||||||    
T  33837579 tactccctccggttctatttacaagagacaatttactttttagatacattaaataatttatgcatttagtttagattcttgactagatacataaattatt 33837678  T
Q  241 caa 243  Q
    |||    
T  33837679 caa 33837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 40834143 - 40834237
Alignment:
Q  150 cggtcctatttacaagagataatttactttt-tagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| |||| | |||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  40834143 cggtcctatttacaagagacaattaatttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaa 40834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 42189818 - 42189904
Alignment:
Q  157 atttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| ||||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  42189818 atttacaagagacaatttactttttaaatatattaaataatttatgtatttggtttaggttcttgactagatatatacattattcaa 42189904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 42351338 - 42351248
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    ||||||||||||||||||| |||||| |||||||||||| | ||| |||||| |||||| |||||||||||||||||||||||| ||||||    
T  42351338 cggtcctatttacaagagacaatttattttttagatacattaaataatttatatatttgatttaggttcttgactagatacatatattatt 42351248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 43295202 - 43295110
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||| | | || | |||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43295202 cggtcctatttacaaaa-acaaataactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 43295110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 25878305 - 25878219
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||| | ||||||||||| ||||||| |  || ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  25878305 tatttacaagaaacaatttactttt-agatacattatataatttatgtatttgatttaggttcttgactagatacatacattcttcaa 25878219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 29916537 - 29916628
Alignment:
Q  152 gtcctatttacaagagataatttactttt-tagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||| | ||||||||||| |||||||| | ||| |||||||||||||||||| ||||||||||| |||| |||| |||||||    
T  29916537 gtcctatttacaagaaacaatttacttttttagatacattaaataatttatgtatttggtttaagttcttgactaaatac-tacaatattcaa 29916628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 2229065 - 2229133
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||| ||| ||||||||||||||||||| | || |||||||||||||||||||| || |||||||    
T  2229065 aaaatactccctccggtcctatttacaagagacagttgactttttagatacaatgaataatgtatgtat 2229133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 25848116 - 25848050
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||||||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||||    
T  25848116 tactacctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtattt 25848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 41915744 - 41915679
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  41915744 atactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 41915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 11293183 - 11293250
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| | |||||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  11293183 aaatacaatcttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 11293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 16928935 - 16928888
Alignment:
Q  196 atttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  16928935 atttatgtatttggtttagattcttgagtagatacataaattattcaa 16928888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 40465234 - 40465301
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||| ||| || |||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  40465234 aaatactccctccgatcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 40465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 45146014 - 45145951
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgta 204  Q
    |||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||| || ||||||    
T  45146014 tactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta 45145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 43135195 - 43135129
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  43135195 aatacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 43135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 2339440 - 2339375
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  2339440 atactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 2339375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 32159032 - 32159097
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||||||||||||||||||||||| | || |||||||||||||| | ||| || |||||||    
T  32159032 atactcccttcggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtat 32159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 29563815 - 29563743
Alignment:
Q  133 ttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| |||||| ||| ||||||||||||||||||| | || |||||||||||||| | ||| || |||||||    
T  29563815 ttatacaatacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtat 29563743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 30923920 - 30923984
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  30923920 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 30923984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 34028540 - 34028468
Alignment:
Q  133 ttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| |||||| ||| ||||||||||||||||||| | || || ||||||||||| ||||| || |||||||    
T  34028540 ttatataatactccctccggtcctatttacaagagaaagttgaccttttagatacattgaataatgtatgtat 34028468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 7668332 - 7668274
Alignment:
Q  149 tcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||||||||||||||||||| ||||  ||||||| ||||| ||||| || |||||||||    
T  7668332 tcggtcctatttacaagagaaaattgtctttttaaatacattgaataatgtatgtattt 7668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 12763226 - 12763330
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  12763226 aatactcccttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacatta 12763325  T
Q  239 ttcaa 243  Q
    |||||    
T  12763326 ttcaa 12763330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 23248817 - 23248715
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  23248817 tactacctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatt 23248718  T
Q  241 caa 243  Q
    |||    
T  23248717 caa 23248715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 34281819 - 34281716
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||||| ||| ||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34281819 atactcccttcagtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattat 34281720  T
Q  240 tcaa 243  Q
    ||||    
T  34281719 tcaa 34281716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 30866253 - 30866343
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||||||| |||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30866253 cggtcctatttaaaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 30866343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 3411340 - 3411433
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3411340 cggtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaggtacatacattattcaa 3411433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 5909621 - 5909521
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  5909621 atacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattat 5909522  T
Q  240 t 240  Q
    |    
T  5909521 t 5909521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 5347871 - 5347773
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5347871 tactccctccggtcctatttacaagagacaatttactttt-agatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 5347773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 12426680 - 12426577
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||| ||||||||||||| | ||||||||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  12426680 atacttcctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattat 12426581  T
Q  240 tcaa 243  Q
    ||||    
T  12426580 tcaa 12426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 35427808 - 35427709
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| ||| ||||||| ||||||||||||||    
T  35427808 tactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgtttttgactatatacatacattatt 35427709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 10599469 - 10599363
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||||||| ||| || |||||||||||||||| |||||| ||||||||||||   ||| |||||||||||||||||||||  ||||||||||||||||||    
T  10599469 aaaatactccctccgatcctatttacaagagacaatttattttttagatacatacaataatttatgtatttggtttaggtgtttgactagatacatacat 10599370  T
Q  237 tattcaa 243  Q
    |||||||    
T  10599369 tattcaa 10599363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 20397814 - 20397916
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| |||||||||||| |||||| |||||| |||||||||||| | ||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  20397814 tactccctccggtcctatttataagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattatt 20397913  T
Q  241 caa 243  Q
    |||    
T  20397914 caa 20397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 19979646 - 19979541
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| |||| | |||||||| | | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||    
T  19979646 aaatactccctccggttccatttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacatt 19979547  T
Q  238 attcaa 243  Q
    ||||||    
T  19979546 attcaa 19979541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 32050214 - 32050127
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| ||||||||||||||||| | | ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32050214 tatttacaagagacaatttactttttagatatattaaataatttatgtatttggtgtaggttcttgagtagatacatacattattcaa 32050127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 7463448 - 7463550
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||| | ||||||||||||| ||||| |  || ||||||||||||||||||| ||||||| |||||||||||||||||    
T  7463448 tactccctccggtcctatttacaagaaacaatttactttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattatt 7463547  T
Q  241 caa 243  Q
    |||    
T  7463548 caa 7463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 29770350 - 29770423
Alignment:
Q  170 aatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29770350 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatgcattattcaa 29770423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 6173947 - 6174037
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||||| ||||||  |||||||||||| | ||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  6173947 cggtcatatttacaagagacaatttatattttagatacaaaggat---ttatgtatttggtttaggttcttgactagatacatacattattcaa 6174037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 7107638 - 7107731
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||||| |||| | |||||||||||| | ||| ||||||||||||||||||| || ||||||||||||||| |||||||||    
T  7107638 cggtcatatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaa 7107731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 15074621 - 15074716
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||| | |||||||||     ||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15074621 tactccctccggtcctatttacaagaaacaatttactt-----atacattaaataatttatgtatttggtttaagttcttgactagatacatacattatt 15074715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 46680968 - 46680876
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| ||||||||||| | ||||||||||||||||||| | ||| |||||| |||||| |||| ||||||||||||||| ||||||| |||||    
T  46680968 ggtcttatttacaagaaacaatttactttttagatacattaaataatttatatatttgatttaagttcttgactagatatatacattcttcaa 46680876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 12085162 - 12085071
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||| ||||||||||| | |||| |||||||||||| | ||| ||||||||||||| ||||||||||||| |  |||||||||||||||||    
T  12085162 gtcctttttacaagagacagtttattttttagatacattaaataatttatgtatttgatttaggttcttgatttaatacatacattattcaa 12085071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 7107782 - 7107715
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||| ||||||||||||||||||| | || |||||||||||||| ||||| ||||||||||    
T  7107782 aaatactacctccggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtat 7107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 17351624 - 17351519
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    |||||||| | | |||||||||||| |||||| |||| | |||||||||||  | ||| ||||||||||||  ||||| ||||||| |||||||||| ||    
T  17351624 aaaatactccatccggtcctatttaaaagagacaattaattttttagatacgttaaataatttatgtattt-atttagattcttgagtagatacataaat 17351526  T
Q  237 tattcaa 243  Q
    |||||||    
T  17351525 tattcaa 17351519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 12763380 - 12763314
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||| ||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  12763380 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtat 12763314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 26563932 - 26564022
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| |||||||||   |||| |||||||||||| | ||||| | ||||||||||||||||| |||| ||| |||||| || |||||||||    
T  26563932 tcctttttacaagaagcaattaactttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaa 26564022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 20397965 - 20397900
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  20397965 atactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 20397900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 5909469 - 5909517
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagataca 188  Q
    ||||| ||||||||||||||||||||||| |||| || |||||||||||    
T  5909469 atactcccttcggtcctatttacaagagaaaattgaccttttagataca 5909517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 12085032 - 12085088
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatt 206  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||| || ||||||||    
T  12085032 cggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtatt 12085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 46449913 - 46449825
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| |||| | |||||| ||||| | ||| |||||| |||||||||||| || || | || ||||||| |||||||||    
T  46449913 ctatttacaagagacaattaattttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaa 46449825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 23248666 - 23248733
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    ||||| ||| ||||||||||||||||| | | || |||||||||||||| ||||| || |||||||||    
T  23248666 atactccctccggtcctatttacaagataaagttgactttttagatacattgaataatatatgtattt 23248733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 34281668 - 34281734
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||| ||| ||||||||||||||||||| | || |||||||| ||||| ||||| || |||||||||    
T  34281668 tactccctccggtcctatttacaagagaaagttgactttttacatacattgaataatgtatgtattt 34281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 7405441 - 7405545
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  7405441 aatactcccttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacatta 7405540  T
Q  239 ttcaa 243  Q
    |||||    
T  7405541 ttcaa 7405545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 885753 - 885649
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| || |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  885753 aatactacctccgatcctatttacaagagagaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacatta 885654  T
Q  239 ttcaa 243  Q
    |||||    
T  885653 ttcaa 885649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 390954 - 390852
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  390954 tactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 390855  T
Q  241 caa 243  Q
    |||    
T  390854 caa 390852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 31971179 - 31971077
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31971179 tactacctccggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 31971080  T
Q  241 caa 243  Q
    |||    
T  31971079 caa 31971077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 6047947 - 6047843
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  6047947 aatactccctccggtcatatttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacatta 6047848  T
Q  239 ttcaa 243  Q
    |||||    
T  6047847 ttcaa 6047843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 22898849 - 22898948
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  22898849 aaatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttgactatatacatacatt 22898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 24949781 - 24949678
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  24949781 atactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattat 24949682  T
Q  240 tcaa 243  Q
    ||||    
T  24949681 tcaa 24949678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 34639189 - 34639090
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  34639189 tactatcttcggtcctatttataagagacaatttactttttagatacattgaaaaatttatgtatttggtttaggttcttgactagatacatacattatt 34639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 33859487 - 33859589
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  33859487 aatactcccttcggtcctatttacaatagacaatttactttttagatacattaaataatttatgtatttggtttagtttcttgactagatacatacatta 33859586  T
Q  239 ttc 241  Q
    |||    
T  33859587 ttc 33859589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 766576 - 766474
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||| ||||||| ||||||||||||||    
T  766576 tactccctccggtcctatttacaagagataatttattttttagatacattaaataatttatgtatttggtttaggttattgactaaatacatacattatt 766477  T
Q  241 caa 243  Q
    |||    
T  766476 caa 766474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 17225380 - 17225290
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| ||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  17225380 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacattattcaa 17225290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 22880914 - 22881012
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||| ||||||||||    
T  22880914 aaatactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttagtttaggttcttgactatatacatacat 22881012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 6801689 - 6801598
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||| | ||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6801689 gtcctatttacaagaaacaatttactttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattattcaa 6801598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 30686554 - 30686645
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  30686554 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattcaa 30686645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 6045832 - 6045728
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||| | | ||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  6045832 aatactccctccggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagatta 6045733  T
Q  239 ttcaa 243  Q
    |||||    
T  6045732 ttcaa 6045728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 8559047 - 8558961
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8559047 tatttacaagagacaatttattttttagataca-taaataatttatgtatttggtttaggttcttaactagatacatacattattcaa 8558961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 13144344 - 13144263
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacat 236  Q
    ||||||||||||||||  |||||||||||||||| | ||| |||||||||||| |||||||||||||||| |||||||||||    
T  13144344 ctatttacaagagatagattactttttagatacattaaataatttatgtattttgtttaggttcttgacttgatacatacat 13144263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 14931257 - 14931354
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||| | ||| |||||||||||||||||||||| ||     |||||||||||||||    
T  14931257 tactacttccggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttttt-----gatacatacattatt 14931351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 24949628 - 24949694
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  24949628 aatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 24949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 36429 - 36363
Alignment:
Q  177 tttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||| | | ||| ||||||||||||||||||| || ||||||||||| ||| |||||||||    
T  36429 tttttagatatattaaataatttatgtatttggtttagatttttgactagatatataaattattcaa 36363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 1158383 - 1158325
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    ||||||||||||||| |||||| |||||||| ||||| ||||| ||| |||||||||||    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggt 1158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 7405595 - 7405529
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||| ||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  7405595 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtat 7405529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 885600 - 885665
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  885600 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 885665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 8558924 - 8558977
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  8558924 gtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 8558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 14931403 - 14931338
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||| ||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  14931403 atactccctccggtcatatttacaagagacaattgactttttagatacattgaataatgtatgtat 14931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 33859643 - 33859575
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||| ||| ||||||||||||||||||| | || ||||||||||||||  |||| || |||||||    
T  33859643 aaaatactccctccggtcctatttacaagagaaagttaactttttagatacatcgaataatgtatgtat 33859575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 31971027 - 31971093
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||| ||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  31971027 aatactccctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtat 31971093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 6047794 - 6047859
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| ||| ||||||||||||||| ||| | || |||||||||||||| ||||| || |||||||    
T  6047794 atactccctccggtcctatttacaacagaaagttaactttttagatacattgaataatgtatgtat 6047859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 30686701 - 30686629
Alignment:
Q  133 ttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||||| ||| | || |||||||||||||| |||| |||||||| ||||| ||||| || |||||||    
T  30686701 ttataagatactccctcccgttctatttacaagagaaaattgactttttaaatacattgaataatgtatgtat 30686629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 25027692 - 25027795
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  25027692 atactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattat 25027791  T
Q  240 tcaa 243  Q
    ||||    
T  25027792 tcaa 25027795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 37699930 - 37699827
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37699930 atactacatccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattat 37699831  T
Q  240 tcaa 243  Q
    ||||    
T  37699830 tcaa 37699827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 13144879 - 13144981
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13144879 tactacctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 13144978  T
Q  241 caa 243  Q
    |||    
T  13144979 caa 13144981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 41989562 - 41989665
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41989562 atacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattat 41989661  T
Q  240 tcaa 243  Q
    ||||    
T  41989662 tcaa 41989665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 29374169 - 29374271
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  29374169 tactacctccgatcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattatt 29374268  T
Q  241 caa 243  Q
    |||    
T  29374269 caa 29374271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 36419137 - 36419032
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||||||||    
T  36419137 aaatactcccttcggacctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacatt 36419038  T
Q  238 attcaa 243  Q
    ||||||    
T  36419037 attcaa 36419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 7053647 - 7053749
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  7053647 tactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggctcttgactagatacatacattatt 7053746  T
Q  241 caa 243  Q
    |||    
T  7053747 caa 7053749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 7749917 - 7750019
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  7749917 tactccctccggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattatt 7750016  T
Q  241 caa 243  Q
    |||    
T  7750017 caa 7750019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 26898190 - 26898292
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  26898190 tactcccttcagtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattatt 26898289  T
Q  241 caa 243  Q
    |||    
T  26898290 caa 26898292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 1108291 - 1108384
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| |||||||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  1108291 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaa 1108384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 1643341 - 1643442
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||  ||||||||||||| ||||| |||||||||||||||||||||||    
T  1643341 aatactacctccggtcctatttacaatagacaatttactttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacatta 1643440  T
Q  239 tt 240  Q
    ||    
T  1643441 tt 1643442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 7945834 - 7945938
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||||||||||||| | ||||||||||||||||||| | ||| |||||| |||||||||||| |||||||||||||||||||||||    
T  7945834 aatactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatatatttggtttagattcttgactagatacatacatta 7945933  T
Q  239 ttcaa 243  Q
    |||||    
T  7945934 ttcaa 7945938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 6338453 - 6338362
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| ||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6338453 gtcctatttacaaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaa 6338362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 15569481 - 15569378
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| |||||||| |||||| |||||||||    
T  15569481 atacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgattagatatatacattat 15569382  T
Q  240 tcaa 243  Q
    ||||    
T  15569381 tcaa 15569378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 9601742 - 9601640
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||||   ||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  9601742 tactccctccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattatt 9601643  T
Q  241 caa 243  Q
    |||    
T  9601642 caa 9601640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 18353345 - 18353255
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  18353345 tcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaa 18353255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 31803107 - 31803005
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||| ||||||||||    
T  31803107 tactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattatt 31803008  T
Q  241 caa 243  Q
    |||    
T  31803007 caa 31803005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 41046836 - 41046929
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||| ||| ||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  41046836 cggtcctatttacaagagacaatctactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaa 41046929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 904117 - 904013
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| |||| |||||||||| | | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  904117 aatactccctccggttctatttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacacacatta 904018  T
Q  239 ttcaa 243  Q
    |||||    
T  904017 ttcaa 904013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 36417186 - 36417094
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||| |||| | ||||||||||||||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  36417186 ggtcctatttataagaaacaatttactttttagatacattaaataatttatgtatttggattaggttcttgactagatacatacattattcaa 36417094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 20578805 - 20578702
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| ||| |||||    
T  20578805 atacttccttcggtcctatttacaatagacaatttactttttatatacattaaataatttatgtatttggtttaggttattgactagatagatatattat 20578706  T
Q  240 tcaa 243  Q
    ||||    
T  20578705 tcaa 20578702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 16089230 - 16089134
Alignment:
Q  148 ttcggtcctatttacaagagataatttacttttt-agatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||||||| |||||| ||||| ||||| | | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16089230 ttcggtcctatttacaagagacaatttatttttttagatatattaaataatttatgtatttggtttaggttcatgactagatacatacattattcaa 16089134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 21610451 - 21610348
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||||||||||||||| | |||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  21610451 atactccctccggtcctatttacaagaaacaattaactttttatatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattat 21610352  T
Q  240 tcaa 243  Q
    ||||    
T  21610351 tcaa 21610348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 23411163 - 23411266
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| ||||| |||||| |||| | || |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  23411163 atactccctccggtcatatttataagatacaaattactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattat 23411262  T
Q  240 tcaa 243  Q
    ||||    
T  23411263 tcaa 23411266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 42311947 - 42311857
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||||||| |||||| |||||||||||| | ||| |||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  42311947 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaa 42311857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 21090511 - 21090423
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||| || ||| ||||||||||||| ||||| | ||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  21090511 ctatttaaaaaagacaatttactttttaaatacattaaataatgtatgtatttggtttagattcttgactagatacatacattattcaa 21090423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 6910726 - 6910813
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||| | |||||| |||||||||||| | ||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  6910726 tatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaa 6910813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 2825895 - 2825961
Alignment:
Q  177 tttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2825895 tttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattcaa 2825961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 41815196 - 41815286
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  41815196 tcctatttacaataaacaatttactttttaaatacattaaataatttatgtatttggttcaggttcttgactaaatacgtacattattcaa 41815286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 2959379 - 2959286
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| || |||||||||| ||||  |||||||||||||| ||||||| |||||    
T  2959379 cggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaa 2959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 2967848 - 2967755
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||| || |||||||||| ||||  |||||||||||||| ||||||| |||||    
T  2967848 cggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaa 2967755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 14338824 - 14338916
Alignment:
Q  151 ggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||| ||||||||||||| |||| | |||||||||| | | ||| ||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  14338824 ggtcttatttacaagagacaattaattttttagataaattaaataatttatgtatttggtttaaattcttgaatagatacataaattattcaa 14338916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 38393905 - 38393802
Alignment:
Q  140 atactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattat 239  Q
    ||||| ||| |||| |||||||||||| | |||| |||||||| ||| | ||||| ||||||| ||||| ||||| |||||||||| ||||||| |||||    
T  38393905 atacttcctccggttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattat 38393806  T
Q  240 tcaa 243  Q
    ||||    
T  38393805 tcaa 38393802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 29374323 - 29374255
Alignment:
Q  137 aaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  29374323 aaaatactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 29374255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 21090384 - 21090439
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  21090384 cggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtat 21090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 7750061 - 7750003
Alignment:
Q  147 cttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  7750061 cttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 7750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 41815334 - 41815268
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||| ||||||||||||||||||||||| | || |||||||||||||| ||||| || || ||||||    
T  41815334 tactcccttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtacgtattt 41815268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 26898343 - 26898274
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    ||||||| ||| ||||||||||||||||||| | || ||||||||||| || ||||| || |||||||||    
T  26898343 aaatactccctccggtcctatttacaagagaaagttgactttttagatgcattgaataatgtatgtattt 26898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 2825997 - 2825945
Alignment:
Q  153 tcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  2825997 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 2825945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 25027846 - 25027790
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaat 194  Q
    ||||||| ||| ||||||||||||||||||| | || |||||||||||||| |||||    
T  25027846 aaatactccctccggtcctatttacaagagacagttgactttttagatacattgaat 25027790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 36417038 - 36417110
Alignment:
Q  133 ttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||| |||||| ||| ||||||||||||||||||| | || |||||||| ||||| ||||| || |||||||    
T  36417038 ttatataatactccctccggtcctatttacaagagaaatttgactttttaaatacattgaataatgtatgtat 36417110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 37699779 - 37699843
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  37699779 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 37699843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 2959247 - 2959290
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaa 193  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||    
T  2959247 cggtcctatttacaagagaaaattgactttttagatacattgaa 2959290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 2967716 - 2967759
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaa 193  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||    
T  2967716 cggtcctatttacaagagaaaattgactttttagatacattgaa 2967759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 9601601 - 9601656
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  9601601 cggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 9601656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 13145031 - 13144965
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| | || | |||||||||||| ||||| || |||||||    
T  13145031 aatactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtat 13144965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 23411316 - 23411250
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||| ||||||||||||| |||| | |||||||||||| ||||| || |||||||    
T  23411316 aatactccctccggtcttatttacaagagaaaattgattttttagatacattgaataatatatgtat 23411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 31802957 - 31803010
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaat 194  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| |||||    
T  31802957 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaat 31803010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 42311818 - 42311875
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    ||||||||||||||||| | |||| |||||||| ||||| ||||| || |||||||||    
T  42311818 cggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtattt 42311875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 38822 - 38926
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    ||||||| || |||||||| |||||||||| ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  38822 aatactatctccggtcctagttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacatta 38921  T
Q  239 ttcaa 243  Q
    |||||    
T  38922 ttcaa 38926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 243
Target Start/End: Original strand, 29243 - 29345
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattatt 240  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29243 tactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 29342  T
Q  241 caa 243  Q
    |||    
T  29343 caa 29345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 29384 - 29329
Alignment:
Q  150 cggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  29384 cggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 29329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 492457 - 492352
Alignment:
Q  138 aaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatt 237  Q
    ||||||| ||| | ||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||    
T  492457 aaatactccctccagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacatt 492358  T
Q  238 attcaa 243  Q
    ||||||    
T  492357 attcaa 492352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 453 - 544
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  453 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttcgtttaggttcttgactagatacatacattattcaa 544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 594 - 528
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||| ||||| || |||||||    
T  594 aatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 35951 - 36052
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||| |||||||||||| ||||||||||| |||||    
T  35951 aatactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtattttgtttaggttcttaactagatacatgcatta 36050  T
Q  239 tt 240  Q
    ||    
T  36051 tt 36052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 36103 - 36059
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagat 185  Q
    |||| ||| ||||||||||||||||||| |||| |||||||||||    
T  36103 tactccctccggtcctatttacaagagaaaattgactttttagat 36059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 11027 - 11131
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| ||||||| ||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||| |||||||| |||||||||| ||||    
T  11027 aatactccctccggtcctttttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgattagatacatatatta 11126  T
Q  239 ttcaa 243  Q
    |||||    
T  11127 ttcaa 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 11179 - 11115
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| ||||||||||||||||||| | || |||||||||||||| ||||| || |||||||    
T  11179 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatatatgtat 11115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 393 - 480
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||| |||||| ||||||||||||||||| | | ||| |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  393 tatttataagagaaaatttactttttagatatattaaataatttatatatatggtttaggttcttgactagatacatacattattcaa 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 77495 - 77392
Alignment:
Q  139 aatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacatta 238  Q
    |||||| ||| |||||||||||| |||||| |||| | |||||||||||| | ||| ||||||||||||||||||| |||||||||| ||||||| ||||    
T  77495 aatactccctccggtcctatttataagagacaattaa-tttttagatacattaaataatttatgtatttggtttagattcttgactacatacataaatta 77397  T
Q  239 ttcaa 243  Q
    |||||    
T  77396 ttcaa 77392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 77344 - 77408
Alignment:
Q  141 tactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtat 205  Q
    |||| ||| |||||||||||| |||||| | || |||||| ||||||| ||||| ||||||||||    
T  77344 tactccctccggtcctatttataagagaaagttgacttttcagatacattgaataatttatgtat 77408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 15165 - 15255
Alignment:
Q  152 gtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| | | ||||| ||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  15165 gtcctatttacaataaacaatttgctttttagatacattaaataatttatgtatttggtttaggttcttgacta-atacgtacattattcaa 15255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 15297 - 15250
Alignment:
Q  147 cttcggtcctatttacaagagataatttactttttagatacaatgaat 194  Q
    |||||||||||||||||||||| | || |||||||||||||| |||||    
T  15297 cttcggtcctatttacaagagaaagttaactttttagatacattgaat 15250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 5229 - 5317
Alignment:
Q  155 ctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    |||||||||||| | ||||||||||||  ||| | | ||| |||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  5229 ctatttacaagaaacaatttacttttttaatatattaaataatttatatatttggtttaggttcttgactaaatacatatattattcaa 5317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 5360 - 5299
Alignment:
Q  146 ccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtattt 207  Q
    |||||||| |||||||||||||| |||| |||||||||||| | ||||| || |||||||||    
T  5360 ccttcggttctatttacaagagaaaattaactttttagataaattgaataatatatgtattt 5299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 3774 - 3678
Alignment:
Q  156 tatttacaagagataatttactttttagatacaatgaatcatttat---------gtatttggtttaggttcttgactagatacatacattattcaa 243  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||||         |||||||||||||||||||||||| |||||||||||||||||    
T  3774 tatttacaagagacaatttactttttagatacattaaataatttatataatttatgtatttggtttaggttcttgactaaatacatacattattcaa 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 54724 - 54646
Alignment:
Q  132 cttataaaatactaccttcggtcctatttacaagagataatttactttttagatacaatgaatcatttatgtatttggt 210  Q
    |||| |||||||| ||| || ||||||||||| || |||||| |||||| ||||||| ||||| ||||| |||| ||||    
T  54724 cttaaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 54646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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