View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1778_low_4 (Length: 317)
Name: NF1778_low_4
Description: NF1778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1778_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 95 - 279
Target Start/End: Original strand, 26351566 - 26351750
Alignment:
| Q |
95 |
agttagcagaaaaagcacatagttgttagtggtggttgatactcctcaatactcagccaactttgtcctataaatatataaatgtggtttgtgttggatt |
194 |
Q |
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| T |
26351566 |
agttagcagaaaaagcacatagttgttagtggtggttgatactcctcaatactcagccagctttgtcctataaatatataaatgtggtttgtgttggatt |
26351665 |
T |
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| Q |
195 |
tgggttagatccactcactcactcactggctctcattaataagttaggtacttttagaaaaggcacagcattcttttctctgctc |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
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| T |
26351666 |
tgggttagatccactcactcactcactggctctcattaataagttaggtacttttagaaaaggcatagcattcttttctttgctc |
26351750 |
T |
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