View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17790_low_2 (Length: 417)

Name: NF17790_low_2
Description: NF17790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17790_low_2
NF17790_low_2
[»] chr3 (24 HSPs)
chr3 (147-396)||(20020915-20021167)
chr3 (147-396)||(19967111-19967363)
chr3 (147-386)||(14856869-14857111)
chr3 (28-119)||(22793965-22794056)
chr3 (28-120)||(22784282-22784374)
chr3 (28-120)||(22786075-22786167)
chr3 (28-120)||(22788646-22788738)
chr3 (28-120)||(22795723-22795815)
chr3 (242-399)||(19962507-19962676)
chr3 (242-399)||(20027727-20027896)
chr3 (34-119)||(22790449-22790534)
chr3 (34-119)||(22822920-22823005)
chr3 (34-119)||(22824689-22824774)
chr3 (33-121)||(22793719-22793810)
chr3 (34-119)||(22826457-22826542)
chr3 (37-121)||(22785835-22785921)
chr3 (32-121)||(22790198-22790288)
chr3 (32-121)||(22822670-22822760)
chr3 (32-121)||(22824438-22824528)
chr3 (34-110)||(22821143-22821219)
chr3 (33-121)||(22795478-22795568)
chr3 (32-121)||(22826208-22826298)
chr3 (33-109)||(22784034-22784110)
chr3 (33-109)||(22788398-22788474)
[»] chr8 (6 HSPs)
chr8 (28-120)||(5611360-5611452)
chr8 (28-120)||(5613153-5613245)
chr8 (37-121)||(5611606-5611692)
chr8 (32-121)||(5615139-5615229)
chr8 (34-110)||(5616680-5616756)
chr8 (33-109)||(5613417-5613493)
[»] chr5 (1 HSPs)
chr5 (22-145)||(36735275-36735398)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 2e-96; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 147 - 396
Target Start/End: Complemental strand, 20021167 - 20020915
Alignment:
Q  147 aagaactcatggtttcacaatcatctggtgaaaaccgaacagtcagaactgcctatttccttaaaccatgcatcaaaaaacactcttattctcttccacc 246  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| || || |||||||||||||    
T  20021167 aagaactcatggtttcactatcatctggtgaaaaccaaactgtcagaactgcctatttcctcaaaccatgcatcaaaaaagacactgattctcttccacc 20021068  T
Q  247 ccatttctctatttcctctcaaaccaccataaatttgccattagaagtgaagtacaatgggtggagaattccac---aagaatggaagaaatgggtcaac 343  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||  |||||||||||  |||||   |||||||||||||||||||||||    
T  20021067 ccatttctctatttcctctcaaaccaccacaaatttgccattagaagttaagtattatgggtggagagctccacaagaagaatggaagaaatgggtcaac 20020968  T
Q  344 aaattaagaccaaaggttgaatttttatggatcaaaactggaatataccatgc 396  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20020967 aaattaagaccaaagtttgaatttctatggatcaaaactggaatataccatgc 20020915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 147 - 396
Target Start/End: Original strand, 19967111 - 19967363
Alignment:
Q  147 aagaactcatggtttcacaatcatctggtgaaaaccgaacagtcagaactgcctatttccttaaaccatgcatcaaaaaacactcttattctcttccacc 246  Q
    ||||||||||||| ||||  ||||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  19967111 aagaactcatggtctcaccctcatctgatgaaaaccaaacattcagaactgcctatttccttaaaccatgcaacaaagaacactcttattctcttccacc 19967210  T
Q  247 ccatttctctatttcctctcaaaccaccataaatttgccattagaagtgaagtacaatgggtggagaattccacaa---gaatggaagaaatgggtcaac 343  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||  || |||   |||||||||||||||||||||    
T  19967211 ccatttctctatttcctttcaaaccaccacaaatttgccactagaagtgaagtacaatgggtggagaaggccgcaagatgaatggaagaaatgggtcaac 19967310  T
Q  344 aaattaagaccaaaggttgaatttttatggatcaaaactggaatataccatgc 396  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  19967311 aaattacgaccaaagtttgaatttttatggatcaaaactggaatataccatgc 19967363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 147 - 386
Target Start/End: Complemental strand, 14857111 - 14856869
Alignment:
Q  147 aagaactcatggtttcacaatcatctggtgaaaaccgaacagtcagaactgcctatttccttaaaccatgcatcaaaaaacactcttattctcttccacc 246  Q
    |||||||||||||||||| |||||||| |||||||| ||| |||| ||| |||||||| |||||||||||||||| | |  || ||||||||||| ||||    
T  14857111 aagaactcatggtttcaccatcatctgctgaaaaccaaactgtcaaaaccgcctattttcttaaaccatgcatcagagacgacacttattctcttacacc 14857012  T
Q  247 ccatttctctatttcctctcaaaccaccataaatttgccattagaagtgaagtacaatgggtggagaattccac---aagaatggaagaaatgggtcaac 343  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||     
T  14857011 ccatttctctatttcctctcaaaccaccacaaatttgccattagaagtgaagtacaatgggtggagaactccacaagaagaatggaagaaatgggtcaaa 14856912  T
Q  344 aaattaagaccaaaggttgaatttttatggatcaaaactggaa 386  Q
    ||||||  ||||||| ||||||||||||||||||||| |||||    
T  14856911 aaattacaaccaaagtttgaatttttatggatcaaaattggaa 14856869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 22794056 - 22793965
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtat 119  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||| ||||||| |||||| ||||||||||| ||||||||    
T  22794056 aacgaaggaaattcgttaccgaggcgtgaggaagacgaaaaatggcagatacgatgcggaaatttgagaccgatggagaaaagcttatgtat 22793965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 22784374 - 22784282
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatg 120  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||| |||||| || ||||||| |||||||||||||||||| || ||||||    
T  22784374 aacgaaggaaattcgttaccgaggcttgaggaagacaaaaaatggcagatacggtgcggaaatttgagacccatggagaaaagcttctgtatg 22784282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 22786167 - 22786075
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatg 120  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||| |||||| || ||||||| |||||||||||||||||| || ||||||    
T  22786167 aacgaaggaaattcgttaccgaggcgtgaggaagacgaaaaatggcagatacggtgcggaaatttgagacccatggagaaaagcttctgtatg 22786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 22788738 - 22788646
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatg 120  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||| |||||| || ||||||| |||||||||||||||||| || ||||||    
T  22788738 aacgaaggaaattcgttaccgaggcttgaggaagacaaaaaatggcagatacggtgcggaaatttgagacccatggagaaaagcttctgtatg 22788646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 22795815 - 22795723
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatg 120  Q
    |||||||||||||||||||   |||||||||||||||||| ||||| |||||| || ||||||| |||||||||||||||||| |||||||||    
T  22795815 aacgaaggaaattcgttactgaggcgtgaggaagacaaaatatggcagatacggtgcggaaatttgagacccatggagaaaagcttatgtatg 22795723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 399
Target Start/End: Original strand, 19962507 - 19962676
Alignment:
Q  242 ccaccccatttctctatttcctctcaaaccaccataaatttgccattagaagtgaagtacaatgggtggagaa------------ttccacaagaatgga 329  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||| |||| ||||||| ||| |||||||            | | || ||||||||    
T  19962507 ccaccccttttctctatttcctctcaaaccaccacaaattcgccattacaagtaaagtacagtggatggagaatacagccaaagttacaaccagaatgga 19962606  T
Q  330 agaaatgggtcaacaaattaagaccaaaggttgaatttttatggatcaaaactggaatataccatgcaat 399  Q
    | || |||||||  ||||||  ||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  19962607 acaactgggtcacaaaattacaaccaaagtttgaatctttatggatcaaaactggaatatacaatgcaat 19962676  T

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Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 399
Target Start/End: Complemental strand, 20027896 - 20027727
Alignment:
Q  242 ccaccccatttctctatttcctctcaaaccaccataaatttgccattagaagtgaagtacaatgggtggagaattcc------------acaagaatgga 329  Q
    ||||||| ||||||||||| ||||||||||||||  |||| ||||||| |||| ||||||||||| |||||||| |             || ||||||||    
T  20027896 ccaccccttttctctattttctctcaaaccaccaccaattcgccattacaagtaaagtacaatggatggagaatacagccaaagttacaaccagaatgga 20027797  T
Q  330 agaaatgggtcaacaaattaagaccaaaggttgaatttttatggatcaaaactggaatataccatgcaat 399  Q
    | || |||||||  ||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  20027796 acaactgggtcacaaaattacaaccaaagtttgaatctttatggatcaaaactggaatataccatgcaat 20027727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 22790534 - 22790449
Alignment:
Q  34 ggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtat 119  Q
    ||||||||||||||  |||||||||||||||||||||||| |||| | || ||||||| |||||||||||| ||||| || |||||    
T  22790534 ggaaattcgttaccgaggcgtgaggaagacaaaaaatggcagatatggtgcggaaatttgagacccatggaaaaaagcttctgtat 22790449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 22823005 - 22822920
Alignment:
Q  34 ggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtat 119  Q
    ||||||||||||||  |||||||||||||||||||||||| |||| | || ||||||| |||||||||||| ||||| || |||||    
T  22823005 ggaaattcgttaccgaggcgtgaggaagacaaaaaatggcagatatggtgcggaaatttgagacccatggaaaaaagcttctgtat 22822920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 22824774 - 22824689
Alignment:
Q  34 ggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtat 119  Q
    ||||||||||||||  |||||||||||||||||||||||| |||| | || ||||||| |||||||||||| ||||| || |||||    
T  22824774 ggaaattcgttaccgaggcgtgaggaagacaaaaaatggcagatatggtgcggaaatttgagacccatggaaaaaagcttctgtat 22824689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 22793719 - 22793810
Alignment:
Q  33 aggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa---ggttatgtatgg 121  Q
    ||||||||||||||| |||||| ||||||||||||||| || ||||| |||| ||||||  ||||||||||| ||||   ||||||||||||    
T  22793719 aggaaattcgttaccgcggcgtaaggaagacaaaaaatagccgatacaatgtagaaattgcagacccatggaaaaaaaatggttatgtatgg 22793810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 22826542 - 22826457
Alignment:
Q  34 ggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtat 119  Q
    |||||||||||||   |||||||||||||||||||||||| |||| | || ||||||| |||||||||||| ||||| || |||||    
T  22826542 ggaaattcgttactgaggcgtgaggaagacaaaaaatggcagatatggtgcggaaatttgagacccatggaaaaaagcttctgtat 22826457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 22785835 - 22785921
Alignment:
Q  37 aattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa--ggttatgtatgg 121  Q
    ||||||||||| || ||| ||||||||||||||| || ||||| |||  ||||||||||||||||||| ||||  ||||||||||||    
T  22785835 aattcgttaccgcgacgtaaggaagacaaaaaatagccgatacaatgcagaaattcgagacccatggaaaaaaagggttatgtatgg 22785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 22790198 - 22790288
Alignment:
Q  32 aaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa-ggttatgtatgg 121  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||| |||  |||||||||||||| |||| |||| || |||||||||    
T  22790198 aaggaaattcgttaccgcggcgtaaggaagcgaaaaaatggccgatacaatgcagaaattcgagacccctggaaaaaatgggtatgtatgg 22790288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 22822670 - 22822760
Alignment:
Q  32 aaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa-ggttatgtatgg 121  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||| |||  |||||||||||||| |||| |||| || |||||||||    
T  22822670 aaggaaattcgttaccgcggcgtaaggaagcgaaaaaatggccgatacaatgcagaaattcgagacccctggaaaaaatgggtatgtatgg 22822760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 22824438 - 22824528
Alignment:
Q  32 aaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa-ggttatgtatgg 121  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||| |||  |||||||||||||| |||| |||| || |||||||||    
T  22824438 aaggaaattcgttaccgcggcgtaaggaagcgaaaaaatggccgatacaatgcagaaattcgagacccctggaaaaaatgggtatgtatgg 22824528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 22821219 - 22821143
Alignment:
Q  34 ggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaag 110  Q
    |||||||| |||||  |||||||||||||||| ||||||| |||| | || ||||||| |||||| |||||||||||    
T  22821219 ggaaattcattaccgaggcgtgaggaagacaataaatggcagatatggtgcggaaatttgagacctatggagaaaag 22821143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 22795478 - 22795568
Alignment:
Q  33 aggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa--ggttatgtatgg 121  Q
    ||||||||||||||| |||||| | ||||||||||||| || ||||| | |  |||||||||||||| |||| ||||  ||||||||||||    
T  22795478 aggaaattcgttaccgcggcgtaatgaagacaaaaaatagccgatacaacgcagaaattcgagacccgtggaaaaaaatggttatgtatgg 22795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 22826208 - 22826298
Alignment:
Q  32 aaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa-ggttatgtatgg 121  Q
    |||||||||||||||| ||| || ||||||  |||||||||| ||||| |||  |||||||||||||| |||| |||| || |||||||||    
T  22826208 aaggaaattcgttaccgcggtgtaaggaagcgaaaaaatggccgatacaatgcagaaattcgagacccctggaaaaaatgggtatgtatgg 22826298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 22784034 - 22784110
Alignment:
Q  33 aggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa 109  Q
    |||||||| ||||||  ||||| ||||||||||| |||||| ||||| |||  ||||||||| ||||||||| ||||    
T  22784034 aggaaatttgttaccgtggcgtaaggaagacaaacaatggccgatacaatgcagaaattcgaaacccatggaaaaaa 22784110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 22788398 - 22788474
Alignment:
Q  33 aggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa 109  Q
    |||||||| ||||||  ||||| ||||||||||| |||||| ||||| |||  ||||||||| ||||||||| ||||    
T  22788398 aggaaatttgttaccgtggcgtaaggaagacaaacaatggccgatacaatgcagaaattcgaaacccatggaaaaaa 22788474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 5611360 - 5611452
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatg 120  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||| |||||| || ||||||| |||||||||||||||||| || ||||||    
T  5611360 aacgaaggaaattcgttaccgaggcgtgaggaagacgaaaaatggcagatacggtgcggaaatttgagacccatggagaaaagcttctgtatg 5611452  T

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Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 5613153 - 5613245
Alignment:
Q  28 aacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatg 120  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||| |||||| || ||||||| |||||||||||||||||| || ||||||    
T  5613153 aacgaaggaaattcgttaccgaggcttgaggaagacaaaaaatggcagatacggtgcggaaatttgagacccatggagaaaagcttctgtatg 5613245  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 5611692 - 5611606
Alignment:
Q  37 aattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa--ggttatgtatgg 121  Q
    ||||||||||| || ||| ||||||||||||||| || ||||| |||  ||||||||||||||||||| ||||  ||||||||||||    
T  5611692 aattcgttaccgcgacgtaaggaagacaaaaaatagccgatacaatgcagaaattcgagacccatggaaaaaaagggttatgtatgg 5611606  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 5615229 - 5615139
Alignment:
Q  32 aaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa-ggttatgtatgg 121  Q
    |||||||||||||||| |||||| ||||||  |||||||||| ||||| |||  |||||||||||||| |||| |||| || |||||||||    
T  5615229 aaggaaattcgttaccgcggcgtaaggaagcgaaaaaatggccgatacaatgcagaaattcgagacccctggaaaaaatgggtatgtatgg 5615139  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 5616680 - 5616756
Alignment:
Q  34 ggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaag 110  Q
    |||||||| |||||  |||||||||||||||| ||||||| |||| | || ||||||| |||||| |||||||||||    
T  5616680 ggaaattcattaccgaggcgtgaggaagacaataaatggcagatatggtgcggaaatttgagacctatggagaaaag 5616756  T

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Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 5613493 - 5613417
Alignment:
Q  33 aggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaa 109  Q
    |||||||| ||||||  ||||| ||||||||||| |||||| ||||| |||  ||||||||| ||||||||| ||||    
T  5613493 aggaaatttgttaccgtggcgtaaggaagacaaacaatggccgatacaatgcagaaattcgaaacccatggaaaaaa 5613417  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 36735398 - 36735275
Alignment:
Q  22 aagttcaacgaaggaaattcgttaccacggcgtgaggaagacaaaaaatggctgatacgatgtggaaattcgagacccatggagaaaaggttatgtatgg 121  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||| |||| ||  |   ||   |||||||||||||||||||||||   |||||||||    
T  36735398 aagtgcaacgaaggaaattcgttaccgctgcgtgaggaagacaaaatatggttgtaattgtgcaaaaattcgagacccatggagaaaaccatatgtatgg 36735299  T
Q  122 ctaggcatttacaatacagctgaa 145  Q
     |||||| ||   |||||||||||    
T  36735298 ttaggcacttttgatacagctgaa 36735275  T

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