View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17791_high_17 (Length: 280)
Name: NF17791_high_17
Description: NF17791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17791_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 4 - 263
Target Start/End: Complemental strand, 35628962 - 35628705
Alignment:
| Q |
4 |
tttatgataaggttgatacagttacatatgactctatctcacagaaaaagctctaaaatctgcatctaggatcaatgcttattgtggtatatgagatgca |
103 |
Q |
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| T |
35628962 |
tttatgataaggttgatagagttatatatgact--atctcacagaaaaagctctaaaatctgcatctaggatcaatgcttattgtggtatatgaggtgca |
35628865 |
T |
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| Q |
104 |
catctaatggtataaagttagttggtgactgctttatgttgtgctacgtatgtggaattaaatctaaatgtctatagtttccaatttttatgaaaggagt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
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| T |
35628864 |
catctaatggtataaagttagttggtgactgctttatgctgtgctatgtatgtggaattaaatctaaatttctatagtttccaatttttattaaaggagt |
35628765 |
T |
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| Q |
204 |
ttgtggttatgtaatttgatgtgaatgaccttgaatgaataaatacttactcttggtcat |
263 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
35628764 |
ttgtggttatgtaatttgatgtgaatgaccttaaatgaataaatacttactcttggtcat |
35628705 |
T |
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