View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17791_low_25 (Length: 257)

Name: NF17791_low_25
Description: NF17791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17791_low_25
NF17791_low_25
[»] chr6 (10 HSPs)
chr6 (9-240)||(31423744-31423993)
chr6 (149-216)||(27860878-27860946)
chr6 (108-153)||(15480353-15480398)
chr6 (108-145)||(3404882-3404919)
chr6 (108-153)||(11087536-11087581)
chr6 (120-153)||(12203650-12203683)
chr6 (107-152)||(18147339-18147384)
chr6 (108-153)||(19305498-19305543)
chr6 (149-189)||(9403265-9403305)
chr6 (108-152)||(31295548-31295592)
[»] scaffold0074 (1 HSPs)
scaffold0074 (5-100)||(35175-35270)
[»] chr7 (5 HSPs)
chr7 (16-153)||(39879320-39879466)
chr7 (10-100)||(9135435-9135525)
chr7 (149-214)||(13292055-13292121)
chr7 (16-76)||(13292221-13292281)
chr7 (149-216)||(16987022-16987090)
[»] scaffold0360 (1 HSPs)
scaffold0360 (108-153)||(13956-14001)
[»] chr4 (7 HSPs)
chr4 (108-153)||(12683819-12683864)
chr4 (149-204)||(5518633-5518689)
chr4 (150-216)||(15742083-15742150)
chr4 (108-153)||(19809735-19809780)
chr4 (108-153)||(19643736-19643781)
chr4 (108-153)||(47253311-47253356)
chr4 (16-76)||(15742251-15742311)
[»] chr3 (6 HSPs)
chr3 (110-152)||(7835587-7835629)
chr3 (108-153)||(13085085-13085130)
chr3 (108-153)||(17143761-17143806)
chr3 (108-153)||(28715500-28715545)
chr3 (108-152)||(1770859-1770903)
chr3 (149-216)||(25496031-25496099)
[»] scaffold0291 (3 HSPs)
scaffold0291 (9-153)||(8589-8741)
scaffold0291 (149-225)||(15351-15428)
scaffold0291 (108-153)||(15442-15487)
[»] scaffold0002 (2 HSPs)
scaffold0002 (16-101)||(379649-379734)
scaffold0002 (108-152)||(121024-121068)
[»] chr8 (10 HSPs)
chr8 (108-153)||(6928102-6928147)
chr8 (108-153)||(13754792-13754837)
chr8 (108-153)||(13765023-13765068)
chr8 (108-145)||(21416772-21416809)
chr8 (108-153)||(24070886-24070931)
chr8 (112-153)||(30477679-30477720)
chr8 (149-216)||(21416831-21416899)
chr8 (108-153)||(17698297-17698342)
chr8 (149-216)||(11776173-11776241)
chr8 (108-152)||(26916911-26916955)
[»] chr5 (5 HSPs)
chr5 (108-153)||(22903127-22903172)
chr5 (109-153)||(20025318-20025362)
chr5 (112-153)||(27083250-27083291)
chr5 (149-216)||(22865854-22865922)
chr5 (149-216)||(26348021-26348089)
[»] chr2 (9 HSPs)
chr2 (108-153)||(19919078-19919123)
chr2 (108-153)||(36267532-36267577)
chr2 (108-152)||(18770348-18770392)
chr2 (16-153)||(3586296-3586442)
chr2 (108-150)||(15825188-15825230)
chr2 (108-153)||(12169007-12169052)
chr2 (108-153)||(20120381-20120426)
chr2 (149-240)||(3586456-3586548)
chr2 (149-216)||(15390515-15390583)
[»] chr1 (5 HSPs)
chr1 (108-153)||(5671804-5671849)
chr1 (108-153)||(12177420-12177465)
chr1 (108-153)||(22414809-22414854)
chr1 (108-153)||(33101519-33101564)
chr1 (149-216)||(4601417-4601485)
[»] scaffold0380 (1 HSPs)
scaffold0380 (20-76)||(6958-7014)
[»] scaffold0140 (1 HSPs)
scaffold0140 (9-152)||(6224-6376)
[»] scaffold0505 (1 HSPs)
scaffold0505 (108-153)||(7919-7964)
[»] scaffold0023 (1 HSPs)
scaffold0023 (108-153)||(95822-95867)


Alignment Details
Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 31423993 - 31423744
Alignment:
Q  9 gataatactccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcacttcgacgct 108  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  31423993 gataatgctccggtgtgacagtaacggtttccggtacggcaacgttgaatcttcgtggtggaacgaaaggtccttgcagacacgttagcacttcgacgct 31423894  T
Q  109 aatgaaactgagaaagagtatgtagaaagtgttgtgagaag------------------tgaagcaagtgcacccttatataggtgcgtgttgggcatac 190  Q
    |||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||||||| |||||||||||||||    
T  31423893 aatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaatcatgtcttgagggtgaagcaagtgcacccttatataggcgcgtgttgggcatac 31423794  T
Q  191 cgtgtccgggttatgcgacgtgtgatcggggacaattagaggacacatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31423793 cgtgtccgggttatgcgacgtgtgatcggggacaattagaggacacatgt 31423744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 27860946 - 27860878
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| ||||||| |||||| ||||||||| ||| ||||| ||||||||||||| ||||||||    
T  27860946 gtgaagcaagttcacccttttataggcgcgtgttggccataaccgtctccgggttatgcggcgtgtgat 27860878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 15480398 - 15480353
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||    
T  15480398 taatgaaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaa 15480353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 3404919 - 3404882
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtga 145  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  3404919 taatggaactgagaaagagtgtgtagaaagtgttgtga 3404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 11087536 - 11087581
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||||||||||  ||||||||| |||||||    
T  11087536 taatgtaactgagaaagagtatgtagattgtgttgtgaaaagtgaa 11087581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 12203683 - 12203650
Alignment:
Q  120 gaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||||||||| |||||||    
T  12203683 gaaagagtatgtagaaagtgttgtgaaaagtgaa 12203650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 18147339 - 18147384
Alignment:
Q  107 ctaatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    |||||| ||| |||||||||| ||||||||||||||||| ||||||    
T  18147339 ctaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtga 18147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 19305498 - 19305543
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| ||||||| |||||| ||||||||||||||||| |||||||    
T  19305498 taatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtgaa 19305543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 9403265 - 9403305
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcata 189  Q
    ||||||||||| |||||||||||||||||| ||||| ||||    
T  9403265 gtgaagcaagttcacccttatataggtgcgcgttggccata 9403305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 31295592 - 31295548
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    |||||||||||||||||||| ||||  ||||||||||| ||||||    
T  31295592 taatgaaactgagaaagagtgtgtatgaagtgttgtgaaaagtga 31295548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 35175 - 35270
Alignment:
Q  5 ggtagataatactccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcact 100  Q
    |||||||||  ||||||||||| |||||||| ||||||||||||  |||||| ||||||| ||| |||||||||| |||| || ||||||||||||    
T  35175 ggtagataaagctccggtgtgatggtaacggcttccggtacggcggcgttgagtcttcgtagtgcaacgaaatgtgcttgcaggcacgttagcact 35270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 39879320 - 39879466
Alignment:
Q  16 ctccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcacttcgacgc-------- 107  Q
    ||||||||||||||| | |||||||| ||||| |  | ||||||||||||||||||||||| || | || |||||||||| |||||  ||||            
T  39879320 ctccggtgtgacggtgatggtttccgatacggtaatgatgaatcttcgtggtggaacgaaaggtgcctgcagacacgttaacactttaacgctcaagtca 39879419  T
Q  108 -taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
     |||||||||||||||||||| |||| |||||||||| | |||||||    
T  39879420 gtaatgaaactgagaaagagtgtgtaaaaagtgttgtaaaaagtgaa 39879466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 9135525 - 9135435
Alignment:
Q  10 ataatactccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcact 100  Q
    ||||| || |||||||||||||||||||||| |||||||   ||| | |||||  |||||||||||| || | | ||| ||||||||||||    
T  9135525 ataatgcttcggtgtgacggtaacggtttccagtacggcggtgttaagtcttcacggtggaacgaaaggtgcatataggcacgttagcact 9135435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 13292121 - 13292055
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtg 214  Q
    ||||||||||| |||| ||||||||| ||| ||||| ||| ||||| ||||||||||||| ||||||    
T  13292121 gtgaagcaagttcaccattatataggcgcgcgttggccataaccgtctccgggttatgcggcgtgtg 13292055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 13292281 - 13292221
Alignment:
Q  16 ctccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaa 76  Q
    ||||| |||||||||||| |||||||| |||||  || ||| |||||||||||||| ||||    
T  13292281 ctccgatgtgacggtaacagtttccggcacggcggcgatgagtcttcgtggtggaaggaaa 13292221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 16987090 - 16987022
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| |||||||||||||| ||| ||||| ||| ||||| ||||| |||||||  |||||||    
T  16987090 gtgaagcaagttcacccttatataggcgcgcgttggccataaccgtctccggattatgcggtgtgtgat 16987022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 13956 - 14001
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  13956 taatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtgaa 14001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 12683819 - 12683864
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  12683819 taatgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 12683864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 5518633 - 5518689
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttat 204  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||    
T  5518633 gtgaagcaagttcacccttatataggcgcgtgttgggcataaccgtctccgggttat 5518689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 15742150 - 15742083
Alignment:
Q  150 tgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    |||||||| | |||||||||||||| ||||||||| ||| ||||| ||||||||||||| ||||||||    
T  15742150 tgaagcaaattcacccttatataggcgcgtgttggccataaccgtctccgggttatgcggcgtgtgat 15742083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 19809735 - 19809780
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||    
T  19809735 taatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaa 19809780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 19643736 - 19643781
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| |||||||||| |||||| |||||||    
T  19643736 taatggaactgagaaagagtgtgtagaaagtcttgtgaaaagtgaa 19643781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 47253311 - 47253356
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| |||| |||||||||||| |||||||    
T  47253311 taatggaactgagaaagagtgtgtaaaaagtgttgtgaaaagtgaa 47253356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 15742311 - 15742251
Alignment:
Q  16 ctccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaa 76  Q
    |||||||||||||||||||||||| |  |||||  || ||| ||||||||||||| |||||    
T  15742311 ctccggtgtgacggtaacggtttctgacacggcgacgatgagtcttcgtggtggagcgaaa 15742251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 7835629 - 7835587
Alignment:
Q  110 atgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  7835629 atgaaactgagaaatagtatgtagaaagtgttgtgaaaagtga 7835587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 13085130 - 13085085
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||    
T  13085130 taatgaaactgagaaagaatatgtagaaagtattgtgaaaagtgaa 13085085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 17143806 - 17143761
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  17143806 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 17143761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 28715545 - 28715500
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| |||| |||||||||||| |||||||    
T  28715545 taatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgaa 28715500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 1770859 - 1770903
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    ||||| ||||||| |||||| ||||||||||||||||| ||||||    
T  1770859 taatggaactgaggaagagtgtgtagaaagtgttgtgaaaagtga 1770903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 25496031 - 25496099
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| |||||||||||||| ||  ||||  ||| ||||| ||||||||||||| ||||||||    
T  25496031 gtgaagcaagttcacccttatataggcgcacgttgatcataaccgtctccgggttatgcggcgtgtgat 25496099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 8741 - 8589
Alignment:
Q  9 gataatactccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcacttcgacgct 108  Q
    |||||| ||||| |||||| ||||| |||||| |||||||  |||||| |||| | |||||||  ||| ||  ||| || ||||||||||||||||||||    
T  8741 gataatgctccgctgtgacagtaacagtttccagtacggcggcgttgagtctttgcggtggaataaaaggtgtttgcag-cacgttagcacttcgacgct 8643  T
Q  109 ---------aatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
             ||||||||||| ||| ||| ||||||||||||||||| |||||||    
T  8642 caagtcagtaatgaaactgaaaaacagtgtgtagaaagtgttgtgaaaagtgaa 8589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 15428 - 15351
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgatcggggacaa 225  Q
    ||||||||||| |||||||||||||||||  ||| | ||| ||||||||||| ||||||||| ||||||  |||||||    
T  15428 gtgaagcaagttcacccttatataggtgcacgttagtcataaccgtgtccggattatgcgacatgtgattagggacaa 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 15487 - 15442
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  15487 taatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaa 15442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 379649 - 379734
Alignment:
Q  16 ctccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcactt 101  Q
    |||||||||||| ||||| | ||||||||||||  || ||| |||||| |||||||||||| || | | ||| |||||||||||||    
T  379649 ctccggtgtgactgtaacagcttccggtacggcgacgatgagtcttcgcggtggaacgaaaggtgcatctaggcacgttagcactt 379734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 121068 - 121024
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    ||||| |||||||||||||| |||| |||||||||||| ||||||    
T  121068 taatggaactgagaaagagtgtgtataaagtgttgtgaaaagtga 121024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 6928147 - 6928102
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  6928147 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 6928102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 13754792 - 13754837
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||    
T  13754792 taatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaa 13754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 13765023 - 13765068
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||    
T  13765023 taatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaa 13765068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 21416772 - 21416809
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtga 145  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21416772 taatgaaactgagaaagagtgtgtagaaagtgttgtga 21416809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 24070886 - 24070931
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||    
T  24070886 taatggaactaagaaagagtgtgtagaaagtgttgtgagaagtgaa 24070931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 30477679 - 30477720
Alignment:
Q  112 gaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  30477679 gaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 30477720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 21416831 - 21416899
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| ||||||| |||||| ||| ||||||||| ||||| ||||||||||||| | ||||||    
T  21416831 gtgaagcaagttcacccttgtataggggcgcgttgggcataaccgtctccgggttatgcggcctgtgat 21416899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 17698342 - 17698297
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| ||| |||||||||| ||||||||||||||||| |||||||    
T  17698342 taatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 17698297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 11776241 - 11776173
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||| ||||| |||| ||||||||||||| ||||||||| ||||| ||||| | ||||| ||||||||    
T  11776241 gtgaaacaagttcacctttatataggtgcgcgttgggcataaccgtctccggataatgcggcgtgtgat 11776173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 26916955 - 26916911
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    ||||| |||||||| ||||| ||||||||||||||||| ||||||    
T  26916955 taatggaactgagagagagtgtgtagaaagtgttgtgaaaagtga 26916911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 22903127 - 22903172
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  22903127 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 22903172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 20025318 - 20025362
Alignment:
Q  109 aatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||    
T  20025318 aatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaa 20025362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 27083291 - 27083250
Alignment:
Q  112 gaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||||| |||||||| ||||||||||||||||| |||||||    
T  27083291 gaaactgtgaaagagtgtgtagaaagtgttgtgaaaagtgaa 27083250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 22865854 - 22865922
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| |||||||||||||| | | ||||| ||| ||||| ||||| ||||||||| ||||||    
T  22865854 gtgaagcaagttcacccttatataggcgtgcgttggccataaccgtttccggattatgcgacttgtgat 22865922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 26348089 - 26348021
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcatac-cgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| |||||||||||||| || ||||   ||||  ||| ||||||||||||||||||||||    
T  26348089 gtgaagcaagttcacccttatataggcgcatgttttccataaacgtctccgggttatgcgacgtgtgat 26348021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 19919123 - 19919078
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||    
T  19919123 taatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtgaa 19919078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 36267532 - 36267577
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||    
T  36267532 taatgaaactgagaaagagtgtgtagaaagggttgtgaaaagtgaa 36267577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 18770348 - 18770392
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  18770348 taatgaaattgagaaagagtgtgtagaaagtgttgtgaaaagtga 18770392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 3586296 - 3586442
Alignment:
Q  16 ctccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcacttcgacgc-------- 107  Q
    ||||||||||||||| | |||||||||||||||  |||||| |||| | ||||||| |||| || | ||  | |||||||| ||| ||||||            
T  3586296 ctccggtgtgacggtgaaggtttccggtacggcgacgttgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagtca 3586395  T
Q  108 -taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
     ||||| |||||||||| |||  |||||||||||||||| |||||||    
T  3586396 gtaatggaactgagaaaaagtgagtagaaagtgttgtgaaaagtgaa 3586442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 15825188 - 15825230
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagt 150  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||    
T  15825188 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagt 15825230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 12169007 - 12169052
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||| ||||||||| ||||||||||||||||| |||||||    
T  12169007 taatggaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaa 12169052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 20120381 - 20120426
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||||||||||| ||| ||||||| ||||| |||||||    
T  20120381 taatgaaactgagaaagagtgtgtggaaagtggtgtgataagtgaa 20120426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 3586456 - 3586548
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgatcggggacaattagaggacacatgt 240  Q
    ||||||||||| |||||||||||||| ||| ||||| ||| ||||  ||  ||||||||| |||||||   |||||  |||||||||||||||    
T  3586456 gtgaagcaagttcacccttatataggcgcgcgttggtcataaccgcttcttggttatgcggcgtgtgaatagggacggttagaggacacatgt 3586548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 15390583 - 15390515
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcat-accgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| |||||||||||||| ||| || || ||| |||||  ||||||||||||| |||||||    
T  15390583 gtgaagcaagttcacccttatataggcgcgcgtaggccataaccgtccccgggttatgcgatgtgtgat 15390515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 5671804 - 5671849
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  5671804 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 5671849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 12177420 - 12177465
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  12177420 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 12177465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 22414809 - 22414854
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    |||||||||||| ||| ||| ||||||||||||||||| |||||||    
T  22414809 taatgaaactgaaaaaaagtgtgtagaaagtgttgtgaaaagtgaa 22414854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 33101564 - 33101519
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| |||||||||| ||| ||||||||||||||||| |||||||    
T  33101564 taatggaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaa 33101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 4601485 - 4601417
Alignment:
Q  149 gtgaagcaagtgcacccttatataggtgcgtgttgggcata-ccgtgtccgggttatgcgacgtgtgat 216  Q
    ||||||||||| |||||||||||| | |||  |||| |||| |||| ||||||||||||| ||||||||    
T  4601485 gtgaagcaagttcacccttatatacgcgcgcattggtcatagccgtctccgggttatgcgccgtgtgat 4601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 7014 - 6958
Alignment:
Q  20 ggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaa 76  Q
    |||||||||||||||| |||||| |||||  || ||| |||||||||||||||||||    
T  7014 ggtgtgacggtaacggcttccggcacggcgccgatgagtcttcgtggtggaacgaaa 6958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 6224 - 6376
Alignment:
Q  9 gataatactccggtgtgacggtaacggtttccggtacggcatcgttgaatcttcgtggtggaacgaaatgtccttgtagacacgttagcacttcgacgct 108  Q
    |||||| ||| |||||||||||||||  || |||||||||| |||||| |||  |  ||||||| ||| ||  ||| || |||||||||||||||| |||    
T  6224 gataatgctctggtgtgacggtaacgactttcggtacggcaacgttgagtctctgcagtggaacaaaaggtgtttgcaggcacgttagcacttcgaagct 6323  T
Q  109 ---------aatgaaactgagaaagagtatgtagaaagtgttgtgagaagtga 152  Q
             |||| |||||||||| ||| ||||||||||||||||| ||||||    
T  6324 caagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtga 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 7919 - 7964
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| || ||||||||||| ||||||||||||||||| |||||||    
T  7919 taatgcaattgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 7964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 95867 - 95822
Alignment:
Q  108 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaa 153  Q
    ||||| ||||||||||||||  |||||||||||||||| |||||||    
T  95867 taatggaactgagaaagagtgcgtagaaagtgttgtgaaaagtgaa 95822  T

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