View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17791_low_6 (Length: 474)

Name: NF17791_low_6
Description: NF17791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17791_low_6
NF17791_low_6
[»] chr6 (53 HSPs)
chr6 (17-319)||(7637287-7637600)
chr6 (325-462)||(7638791-7638928)
chr6 (325-422)||(33631748-33631845)
chr6 (328-436)||(12330125-12330233)
chr6 (325-462)||(11085585-11085722)
chr6 (325-458)||(13353209-13353342)
chr6 (325-462)||(33494543-33494680)
chr6 (325-458)||(33796334-33796467)
chr6 (329-458)||(4868759-4868889)
chr6 (381-458)||(5648671-5648748)
chr6 (329-458)||(6542890-6543019)
chr6 (325-420)||(3680058-3680153)
chr6 (330-458)||(9705028-9705157)
chr6 (325-421)||(3921603-3921699)
chr6 (367-462)||(30256817-30256911)
chr6 (380-458)||(4868575-4868653)
chr6 (332-458)||(8026397-8026523)
chr6 (332-458)||(30256586-30256712)
chr6 (325-462)||(24554121-24554257)
chr6 (381-441)||(6623409-6623469)
chr6 (325-377)||(17147838-17147890)
chr6 (383-458)||(27772722-27772797)
chr6 (324-458)||(6054177-6054311)
chr6 (383-441)||(8026629-8026687)
chr6 (380-462)||(25065092-25065174)
chr6 (381-458)||(9705262-9705339)
chr6 (381-458)||(11721913-11721990)
chr6 (383-436)||(15082145-15082198)
chr6 (381-458)||(19639112-19639189)
chr6 (325-462)||(30656575-30656712)
chr6 (381-441)||(17147659-17147719)
chr6 (329-377)||(20660962-20661010)
chr6 (383-458)||(8566960-8567034)
chr6 (387-458)||(12329949-12330020)
chr6 (383-458)||(27656466-27656541)
chr6 (383-458)||(27772954-27773029)
chr6 (396-458)||(2753266-2753328)
chr6 (325-391)||(6400798-6400863)
chr6 (383-441)||(12330292-12330350)
chr6 (325-379)||(31961030-31961084)
chr6 (381-458)||(6542708-6542784)
chr6 (381-422)||(16570203-16570244)
chr6 (324-458)||(19712722-19712858)
chr6 (369-458)||(27653225-27653314)
chr6 (358-442)||(1788925-1789009)
chr6 (381-441)||(4161845-4161905)
chr6 (381-441)||(4223465-4223525)
chr6 (384-436)||(5572386-5572438)
chr6 (370-458)||(10145738-10145826)
chr6 (369-441)||(12885082-12885154)
chr6 (380-436)||(19712982-19713038)
chr6 (401-441)||(28867976-28868016)
chr6 (325-377)||(30505591-30505643)
[»] chr4 (60 HSPs)
chr4 (325-464)||(22231251-22231390)
chr4 (325-462)||(6218208-6218345)
chr4 (325-458)||(34357973-34358106)
chr4 (329-441)||(50543512-50543626)
chr4 (325-458)||(40717384-40717517)
chr4 (329-458)||(35788667-35788797)
chr4 (325-430)||(7926364-7926469)
chr4 (325-441)||(4645667-4645783)
chr4 (381-441)||(5398475-5398535)
chr4 (381-458)||(22231072-22231149)
chr4 (381-458)||(22845446-22845523)
chr4 (325-462)||(35796920-35797057)
chr4 (381-458)||(52559575-52559652)
chr4 (325-441)||(32002348-32002463)
chr4 (325-433)||(35819071-35819179)
chr4 (383-458)||(53814675-53814750)
chr4 (332-458)||(14783137-14783263)
chr4 (329-458)||(9685406-9685535)
chr4 (325-441)||(24513302-24513418)
chr4 (369-458)||(25052860-25052949)
chr4 (369-458)||(35609698-35609787)
chr4 (381-458)||(39902562-39902639)
chr4 (368-441)||(50543316-50543389)
chr4 (325-441)||(4905679-4905795)
chr4 (329-456)||(12869210-12869337)
chr4 (367-458)||(21498362-21498453)
chr4 (383-458)||(21498803-21498878)
chr4 (381-436)||(28073180-28073235)
chr4 (332-433)||(8902660-8902762)
chr4 (327-377)||(13555422-13555472)
chr4 (325-391)||(28245704-28245770)
chr4 (329-434)||(40716567-40716673)
chr4 (369-458)||(1518172-1518261)
chr4 (328-461)||(21750223-21750355)
chr4 (381-458)||(22827546-22827623)
chr4 (381-458)||(22863482-22863559)
chr4 (381-458)||(35788902-35788979)
chr4 (381-458)||(35796741-35796818)
chr4 (401-441)||(41853399-41853439)
chr4 (383-458)||(9685640-9685715)
chr4 (370-441)||(17111588-17111659)
chr4 (383-458)||(28245527-28245602)
chr4 (329-387)||(9908778-9908836)
chr4 (396-458)||(22822358-22822420)
chr4 (369-419)||(52827412-52827462)
chr4 (325-458)||(11036689-11036822)
chr4 (401-458)||(12869048-12869105)
chr4 (383-436)||(20822003-20822056)
chr4 (373-458)||(23209849-23209934)
chr4 (383-432)||(26549671-26549720)
chr4 (325-390)||(30530105-30530170)
chr4 (380-441)||(53559288-53559349)
chr4 (369-458)||(53814916-53815005)
chr4 (369-458)||(53828510-53828599)
chr4 (325-377)||(27634259-27634311)
chr4 (325-458)||(31944929-31945063)
chr4 (381-441)||(40726746-40726806)
chr4 (381-441)||(41187931-41187991)
chr4 (402-458)||(44118879-44118935)
chr4 (380-436)||(52559834-52559890)
[»] chr7 (47 HSPs)
chr7 (324-458)||(25620144-25620278)
chr7 (325-462)||(10903089-10903226)
chr7 (325-458)||(21861302-21861435)
chr7 (325-437)||(28080693-28080805)
chr7 (325-458)||(29469613-29469746)
chr7 (325-458)||(36277169-36277302)
chr7 (328-441)||(33996260-33996370)
chr7 (331-462)||(4886333-4886464)
chr7 (381-436)||(36993073-36993128)
chr7 (369-458)||(3038071-3038160)
chr7 (369-458)||(18826475-18826564)
chr7 (375-456)||(31892397-31892478)
chr7 (329-456)||(31892161-31892289)
chr7 (332-420)||(33834237-33834325)
chr7 (324-391)||(2404350-2404417)
chr7 (324-410)||(36993250-36993336)
chr7 (327-441)||(48661500-48661614)
chr7 (381-458)||(6634863-6634940)
chr7 (381-462)||(21054952-21055033)
chr7 (325-441)||(1596619-1596734)
chr7 (383-458)||(34027401-34027476)
chr7 (325-407)||(6001613-6001695)
chr7 (381-427)||(7786253-7786299)
chr7 (327-377)||(9689045-9689095)
chr7 (324-462)||(21821810-21821948)
chr7 (329-458)||(26239862-26239992)
chr7 (365-431)||(31257250-31257316)
chr7 (325-379)||(32279014-32279068)
chr7 (380-458)||(34027635-34027713)
chr7 (380-458)||(48243059-48243137)
chr7 (329-441)||(4506957-4507069)
chr7 (402-462)||(4507169-4507229)
chr7 (369-429)||(40121911-40121971)
chr7 (383-435)||(40746529-40746581)
chr7 (387-458)||(8075867-8075938)
chr7 (367-441)||(6782886-6782960)
chr7 (380-458)||(15317560-15317638)
chr7 (380-458)||(30727116-30727194)
chr7 (396-462)||(41191018-41191084)
chr7 (380-458)||(43085535-43085613)
chr7 (383-436)||(1793950-1794003)
chr7 (401-458)||(23839096-23839153)
chr7 (401-458)||(26562092-26562149)
chr7 (401-458)||(32278904-32278961)
chr7 (381-458)||(47710451-47710528)
chr7 (381-458)||(47722107-47722184)
chr7 (370-458)||(48243425-48243513)
[»] chr1 (53 HSPs)
chr1 (329-441)||(25145667-25145779)
chr1 (325-441)||(27413372-27413488)
chr1 (325-462)||(30369839-30369976)
chr1 (325-442)||(51460385-51460502)
chr1 (325-455)||(26176919-26177049)
chr1 (325-432)||(38733185-38733292)
chr1 (324-458)||(4112948-4113082)
chr1 (325-441)||(33156758-33156875)
chr1 (325-441)||(35772054-35772170)
chr1 (351-441)||(17452797-17452887)
chr1 (325-427)||(26173399-26173501)
chr1 (325-458)||(39348295-39348428)
chr1 (325-442)||(2859570-2859687)
chr1 (325-390)||(4112718-4112783)
chr1 (331-436)||(25255341-25255445)
chr1 (325-458)||(38668133-38668266)
chr1 (381-458)||(52650770-52650847)
chr1 (370-458)||(3169774-3169862)
chr1 (337-436)||(8870865-8870964)
chr1 (369-436)||(29265983-29266050)
chr1 (367-458)||(51589234-51589325)
chr1 (383-441)||(52127745-52127803)
chr1 (384-458)||(52961590-52961664)
chr1 (325-458)||(4098346-4098478)
chr1 (381-458)||(15986332-15986409)
chr1 (381-458)||(40079160-40079237)
chr1 (381-462)||(41035826-41035907)
chr1 (369-458)||(51589814-51589903)
chr1 (396-456)||(5109261-5109320)
chr1 (325-441)||(32783224-32783340)
chr1 (383-458)||(51589000-51589075)
chr1 (371-429)||(2120114-2120172)
chr1 (396-458)||(12244976-12245038)
chr1 (383-441)||(17452680-17452738)
chr1 (380-462)||(38733386-38733468)
chr1 (381-441)||(31432229-31432289)
chr1 (396-455)||(5953751-5953810)
chr1 (325-420)||(16162979-16163074)
chr1 (383-458)||(40316051-40316126)
chr1 (381-436)||(43409836-43409891)
chr1 (396-458)||(855989-856051)
chr1 (380-458)||(29898920-29898998)
chr1 (396-458)||(31181527-31181589)
chr1 (383-441)||(51590063-51590121)
chr1 (381-446)||(32031904-32031969)
chr1 (381-434)||(35772296-35772349)
chr1 (380-441)||(42586437-42586498)
chr1 (405-458)||(52907392-52907445)
chr1 (324-436)||(7307751-7307863)
chr1 (381-441)||(25145484-25145544)
chr1 (380-436)||(34600933-34600989)
chr1 (380-436)||(42351858-42351914)
chr1 (325-377)||(52961436-52961488)
[»] chr5 (49 HSPs)
chr5 (324-458)||(15480330-15480464)
chr5 (324-441)||(9368620-9368737)
chr5 (339-458)||(24528548-24528667)
chr5 (325-462)||(25258244-25258381)
chr5 (325-462)||(25322034-25322171)
chr5 (329-458)||(41666939-41667069)
chr5 (325-442)||(18333642-18333759)
chr5 (331-432)||(2063683-2063784)
chr5 (329-436)||(24346683-24346791)
chr5 (352-458)||(20225049-20225155)
chr5 (325-419)||(43117694-43117788)
chr5 (369-462)||(24487632-24487725)
chr5 (369-441)||(8081100-8081172)
chr5 (329-436)||(24270052-24270159)
chr5 (328-407)||(95447-95526)
chr5 (383-458)||(7607602-7607677)
chr5 (331-458)||(24531607-24531734)
chr5 (383-458)||(27132994-27133069)
chr5 (324-458)||(17352611-17352744)
chr5 (381-458)||(41666756-41666833)
chr5 (324-456)||(20510818-20510949)
chr5 (381-441)||(25258093-25258153)
chr5 (381-441)||(25321883-25321943)
chr5 (327-458)||(6919374-6919504)
chr5 (381-436)||(13700588-13700643)
chr5 (375-441)||(15480584-15480650)
chr5 (396-458)||(18333479-18333541)
chr5 (381-458)||(95265-95342)
chr5 (328-421)||(7133956-7134048)
chr5 (384-441)||(24647721-24647778)
chr5 (325-458)||(38731781-38731914)
chr5 (369-441)||(8098342-8098414)
chr5 (383-458)||(21209922-21209997)
chr5 (380-458)||(12034698-12034776)
chr5 (396-462)||(17015893-17015959)
chr5 (332-441)||(26137294-26137404)
chr5 (380-458)||(28510099-28510177)
chr5 (381-435)||(38731602-38731656)
chr5 (381-462)||(20510641-20510722)
chr5 (401-458)||(24346520-24346577)
chr5 (325-422)||(32908895-32908992)
chr5 (396-436)||(170565-170605)
chr5 (369-421)||(1564554-1564606)
chr5 (396-436)||(7369754-7369794)
chr5 (325-377)||(8081292-8081344)
chr5 (383-435)||(8287832-8287884)
chr5 (381-441)||(13296698-13296757)
chr5 (369-441)||(29909708-29909780)
chr5 (381-441)||(33337454-33337514)
[»] chr8 (51 HSPs)
chr8 (325-458)||(24532364-24532497)
chr8 (325-458)||(41790667-41790799)
chr8 (325-441)||(3157502-3157618)
chr8 (325-458)||(11232372-11232505)
chr8 (325-434)||(20301293-20301402)
chr8 (325-434)||(21087925-21088034)
chr8 (324-441)||(8084152-8084269)
chr8 (325-458)||(39052872-39053005)
chr8 (325-420)||(10615440-10615535)
chr8 (332-458)||(10614889-10615015)
chr8 (325-458)||(31197623-31197755)
chr8 (329-436)||(5932131-5932238)
chr8 (331-458)||(12688080-12688207)
chr8 (324-458)||(37868525-37868659)
chr8 (351-458)||(11232163-11232270)
chr8 (325-458)||(8466666-8466800)
chr8 (369-458)||(4828076-4828165)
chr8 (369-458)||(19256807-19256896)
chr8 (325-441)||(37001251-37001370)
chr8 (381-458)||(37001472-37001549)
chr8 (369-441)||(10884090-10884161)
chr8 (381-441)||(12547123-12547183)
chr8 (381-441)||(39960217-39960277)
chr8 (381-441)||(42846604-42846664)
chr8 (383-458)||(19256587-19256662)
chr8 (383-458)||(24075307-24075382)
chr8 (380-458)||(35682779-35682857)
chr8 (383-456)||(11598849-11598922)
chr8 (381-434)||(12688339-12688392)
chr8 (369-458)||(17469826-17469915)
chr8 (381-458)||(18939296-18939373)
chr8 (325-462)||(20094738-20094874)
chr8 (380-441)||(27204989-27205050)
chr8 (380-441)||(27205087-27205148)
chr8 (370-458)||(12317054-12317142)
chr8 (325-422)||(15042827-15042926)
chr8 (325-377)||(18004272-18004324)
chr8 (381-441)||(27205185-27205245)
chr8 (381-436)||(8084392-8084447)
chr8 (383-458)||(17477073-17477148)
chr8 (383-458)||(34653159-34653233)
chr8 (396-458)||(4828301-4828363)
chr8 (327-433)||(8849213-8849319)
chr8 (383-441)||(39743554-39743612)
chr8 (383-436)||(4963384-4963437)
chr8 (382-435)||(8929048-8929101)
chr8 (381-462)||(18004095-18004176)
chr8 (380-441)||(22638177-22638238)
chr8 (401-458)||(38447446-38447503)
chr8 (381-441)||(3157326-3157385)
chr8 (332-459)||(26208198-26208326)
[»] chr3 (44 HSPs)
chr3 (325-458)||(20327792-20327925)
chr3 (326-458)||(54567900-54568032)
chr3 (325-458)||(4155332-4155465)
chr3 (325-458)||(35038371-35038504)
chr3 (325-432)||(20303328-20303435)
chr3 (325-441)||(45828044-45828160)
chr3 (369-458)||(1723063-1723152)
chr3 (329-436)||(16239621-16239729)
chr3 (334-458)||(16926901-16927025)
chr3 (325-441)||(26272267-26272383)
chr3 (324-435)||(33640076-33640188)
chr3 (382-458)||(45828254-45828330)
chr3 (324-458)||(11589793-11589927)
chr3 (380-458)||(35038192-35038270)
chr3 (330-422)||(8142595-8142687)
chr3 (381-441)||(17638259-17638319)
chr3 (381-441)||(24866222-24866282)
chr3 (358-458)||(29215791-29215890)
chr3 (321-460)||(35018481-35018620)
chr3 (351-458)||(54368524-54368631)
chr3 (380-458)||(31317474-31317552)
chr3 (381-458)||(50083079-50083157)
chr3 (379-436)||(16239857-16239914)
chr3 (401-441)||(7697417-7697457)
chr3 (381-441)||(8018993-8019053)
chr3 (384-436)||(13574686-13574738)
chr3 (369-441)||(45138958-45139030)
chr3 (380-458)||(4155567-4155645)
chr3 (331-436)||(12930076-12930182)
chr3 (387-441)||(20327619-20327673)
chr3 (371-441)||(22729125-22729195)
chr3 (396-458)||(23708238-23708300)
chr3 (396-458)||(23726694-23726756)
chr3 (396-458)||(23745150-23745212)
chr3 (396-458)||(24063675-24063737)
chr3 (381-455)||(27086601-27086675)
chr3 (415-461)||(34221765-34221811)
chr3 (383-429)||(47702410-47702456)
chr3 (383-441)||(50052540-50052598)
chr3 (401-458)||(9273203-9273260)
chr3 (335-464)||(29575844-29575972)
chr3 (381-441)||(8142407-8142466)
chr3 (370-458)||(17001409-17001497)
chr3 (381-441)||(31317253-31317313)
[»] chr2 (39 HSPs)
chr2 (325-436)||(16419297-16419408)
chr2 (325-441)||(2029794-2029910)
chr2 (325-458)||(40379387-40379520)
chr2 (332-458)||(15124733-15124859)
chr2 (325-467)||(33606232-33606374)
chr2 (369-458)||(5509087-5509176)
chr2 (325-441)||(14466353-14466469)
chr2 (324-458)||(13250199-13250333)
chr2 (351-458)||(29718336-29718443)
chr2 (383-458)||(40149004-40149079)
chr2 (329-422)||(93301-93394)
chr2 (329-422)||(93574-93667)
chr2 (402-458)||(42639634-42639690)
chr2 (383-458)||(19191611-19191686)
chr2 (329-458)||(5711621-5711751)
chr2 (381-458)||(16419510-16419587)
chr2 (325-458)||(17719408-17719541)
chr2 (369-458)||(28407780-28407869)
chr2 (377-458)||(30006574-30006655)
chr2 (377-458)||(30063262-30063343)
chr2 (381-458)||(40379208-40379285)
chr2 (381-456)||(5851680-5851756)
chr2 (370-458)||(17854917-17855005)
chr2 (324-435)||(21383611-21383723)
chr2 (381-441)||(25082536-25082596)
chr2 (370-441)||(10570995-10571066)
chr2 (380-458)||(5711437-5711515)
chr2 (369-458)||(2324248-2324337)
chr2 (381-458)||(9927919-9927996)
chr2 (332-441)||(24395888-24395997)
chr2 (325-410)||(40149179-40149264)
chr2 (381-441)||(2030029-2030089)
chr2 (380-435)||(31700743-31700798)
chr2 (396-458)||(32884115-32884177)
chr2 (401-458)||(2324482-2324539)
chr2 (381-434)||(17719598-17719651)
chr2 (329-458)||(36352106-36352235)
chr2 (369-433)||(27036402-27036466)
chr2 (402-458)||(37769963-37770019)
[»] scaffold0048 (1 HSPs)
scaffold0048 (330-462)||(81846-81978)
[»] scaffold0692 (2 HSPs)
scaffold0692 (325-458)||(5697-5830)
scaffold0692 (381-458)||(5543-5620)
[»] scaffold0519 (2 HSPs)
scaffold0519 (325-458)||(1924-2057)
scaffold0519 (380-458)||(2159-2237)
[»] scaffold0129 (1 HSPs)
scaffold0129 (325-458)||(14311-14444)
[»] scaffold0092 (2 HSPs)
scaffold0092 (329-458)||(5663-5792)
scaffold0092 (380-462)||(5894-5976)
[»] scaffold0481 (1 HSPs)
scaffold0481 (369-458)||(3458-3547)
[»] scaffold0400 (1 HSPs)
scaffold0400 (325-441)||(3870-3986)
[»] scaffold0365 (1 HSPs)
scaffold0365 (325-441)||(4514-4630)
[»] scaffold0005 (2 HSPs)
scaffold0005 (381-441)||(288656-288716)
scaffold0005 (332-458)||(56467-56593)
[»] scaffold0003 (1 HSPs)
scaffold0003 (325-390)||(102320-102385)
[»] scaffold0181 (1 HSPs)
scaffold0181 (381-456)||(20949-21024)
[»] scaffold0334 (1 HSPs)
scaffold0334 (384-458)||(4431-4505)
[»] scaffold0024 (1 HSPs)
scaffold0024 (396-462)||(89567-89633)
[»] scaffold0083 (1 HSPs)
scaffold0083 (331-377)||(51362-51408)
[»] scaffold0766 (1 HSPs)
scaffold0766 (385-458)||(6282-6355)


Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 319
Target Start/End: Original strand, 7637287 - 7637600
Alignment:
Q  17 ataaataactgaataaacaaacaagaaggcatcagaagaaatcaatttgcttaatacttactttgtcaatattttctgtacaaacgttttttaaaagcaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||| |||||||||||||||||||||    
T  7637287 ataaataactgaataaaccaacaagaaggcatcagaagaaatcaatttgcttaataatt----tgtcaatattttctgcacaaacgttttttaaaagcaa 7637382  T
Q  117 ggtgggatctcttgttaaattttcgatctaaattatttatatagattagcatctatatatcaataatcaaaaggctatatatactaaccattgattaaat 216  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7637383 agtgggacctcttgttaaattttcgatctaaattatttatatagattagcatctatatatcaataatcaaaaggctatatatactaaccattgattaaat 7637482  T
Q  217 aagtaattggattcgaaaaaataccaacaataaattagatgtaagagatttggacc---------------tagtaaaaatttcttacatataacatgat 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||               |||||||||||||||||||||||||||||    
T  7637483 aagtaattggattcgaaaaaataccaacaataaattagatgtaagagatttggacctcttaagcaaatggttagtaaaaatttcttacatataacatgat 7637582  T
Q  302 aagtgaaagacaaaaaat 319  Q
    ||||||||||||||||||    
T  7637583 aagtgaaagacaaaaaat 7637600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 7638791 - 7638928
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7638791 atagcggaaacctgatagcaggtgatccaatagatcttggagaagctctgatatcttcttagaaatcatagttggacctaacacaaccgcacaaaaccag 7638890  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  7638891 cttgtgaggtgaagattgtcctcatttataaacatatt 7638928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 33631748 - 33631845
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||| |||||||||    
T  33631748 atagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatcatcttaaaaatcatggttggacctaactcaaccccacaaaacc 33631845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 436
Target Start/End: Original strand, 12330125 - 12330233
Alignment:
Q  328 gcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    |||||||||||||||||||||  ||||| ||| ||||||| ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||    
T  12330125 gcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaaccggctt 12330224  T
Q  428 gtgaggtga 436  Q
    |||||||||    
T  12330225 gtgaggtga 12330233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 462
Target Start/End: Complemental strand, 11085722 - 11085585
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||   || ||||||| ||||| | | | ||||||||||| || ||||||||||||||||||||||||||| |    
T  11085722 atagcggaaacctgatagcaggtggcccaacgtatcttggagaggctctaaaaccatcttagaaatcgtgattggacctaacacaaccgcacaaaaccgg 11085623  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||| ||||  |||  || || |||||||||||||    
T  11085622 cttgtgaagtgagaattgcccccacttataaacatatt 11085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 13353342 - 13353209
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| ||||||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |    
T  13353342 atagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgg 13353243  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  13353242 cttgtaaggtgaggattgcccccacttataaaca 13353209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 462
Target Start/End: Complemental strand, 33494680 - 33494543
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||| |||||||||||||||||||| ||||| ||| | | ||| | ||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |    
T  33494680 atagtggaaacctgatagcaggtgacccaatggatctcgaagaggttctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgg 33494581  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| ||||  || || |||||||||||||    
T  33494580 cttgtgaggtgaggattgcccccacttataaacatatt 33494543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 33796467 - 33796334
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| ||||||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |    
T  33796467 atagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgg 33796368  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  33796367 cttgtaaggtgaggattgcccccacttataaaca 33796334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 4868759 - 4868889
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  |||   ||| |||||| || |||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||||    
T  4868759 cggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggctt 4868858  T
Q  428 gtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| ||||  || || |||||||||    
T  4868859 gtgaggtgaggattgcccccacttataaaca 4868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 5648671 - 5648748
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||| |||| |||| | |||||||||    
T  5648671 tcttagaaattatggttggacctaacacaacctcacaaaaccggcttgtgaggtgatgattgtccttaattataaaca 5648748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 6542890 - 6543019
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    |||||||||||||||| |||| ||||| ||| ||| ||| ||||||||| | |||| |||||| || ||||  ||||||||||| ||||||||| ||||     
T  6542890 cggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcgtggttgggtctaacacaaccccacaaaaccggcttc 6542989  T
Q  429 tgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||||  || || |||||||||    
T  6542990 tgaggtgatgattgcccccacttataaaca 6543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 420
Target Start/End: Complemental strand, 3680153 - 3680058
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaa 420  Q
    ||||||||||||| ||||||||||| || || ||||||||||| | ||||||| | ||||||||||  || |||| |||||||||||| |||||||    
T  3680153 atagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaa 3680058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 458
Target Start/End: Complemental strand, 9705157 - 9705028
Alignment:
Q  330 ggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    |||||||||||||||||||  |||| | || |||||| || |||||||| | ||||||||||  || |||| |||||||||||| |||||||||  ||||    
T  9705157 ggaaacctgatagcaggtggcccaacaaatcttggaggaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttg 9705058  T
Q  429 tgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||||  || || |||||||||    
T  9705057 tgaggtgatgattgcccccacttataaaca 9705028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 421
Target Start/End: Complemental strand, 3921699 - 3921603
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaac 421  Q
    ||||||||||| ||||||||||||||||||| ||| ||| ||| ||||||||| | | |||||||||||| ||  ||||||||| |||  |||||||    
T  3921699 atagcggaaacttgatagcaggtgatccaatggatcttgaagaggctctgataccatattagaaatcatggttaaacctaacacgaccctacaaaac 3921603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 462
Target Start/End: Complemental strand, 30256911 - 30256817
Alignment:
Q  367 aagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||||||    
T  30256911 aagctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt-gccccacttataaacatatt 30256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 4868575 - 4868653
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  4868575 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 4868653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 8026523 - 8026397
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    |||||||||| ||||||  |||| | ||  || ||| ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||    
T  8026523 aaacctgataacaggtggcccaacaaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 8026424  T
Q  432 ggtgaagattatcctcatttataaaca 458  Q
    ||||| ||||  || || |||||||||    
T  8026423 ggtgaggattgcccccacttataaaca 8026397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 30256712 - 30256586
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    ||||||||||||| | |  ||||| ||||||||| | ||||||||| |  |||||||||| || |||| |||||||||||| ||||||||| | ||||||    
T  30256712 aaacctgatagcatgcggcccaatggattttggaaaggctctgataccaccttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtga 30256613  T
Q  432 ggtgaagattatcctcatttataaaca 458  Q
    | ||| ||||  || || |||||||||    
T  30256612 gttgaggattgcccccagttataaaca 30256586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 462
Target Start/End: Complemental strand, 24554257 - 24554121
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||| ||||||||||||||||  ||||| ||| ||| |||  |||||||| | | |||||||| ||| |||   ||||||||||  ||||||||| |    
T  24554257 atagcggtaacctgatagcaggtgg-ccaatggatcttgaagacactctgataccatgttagaaattatggttgagactaacacaactccacaaaaccgg 24554159  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||||||||  || || ||||||| |||||    
T  24554158 cttgtgaggtgaagattgcccccacttataaatatatt 24554121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 6623409 - 6623469
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || ||||||||||||||||| ||||||||| |||||| |||||| ||||    
T  6623409 tcttagaaatcgtggttggacctaacacaaccccacaaaaccggcttgtaaggtgaggatt 6623469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 17147838 - 17147890
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||    
T  17147838 atagcggaaacctgatagcaggtgacccaatggatgttggagaggctctgata 17147890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 27772797 - 27772722
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || ||||||||||||||||  ||||||||| ||||||||||||| ||||  || || |||||||||    
T  27772797 ttagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 27772722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 6054311 - 6054177
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||||||||||||||||||  | |||  || ||| ||| | ||||||||| ||||||||||| || |||   ||||||| | | ||||||||      
T  6054311 aatagcggaaacctgatagcaggtggcctaatgaatcttgaagaggttctgatatcatcttagaaatcgtggttgagtctaacacgatcccacaaaactg 6054212  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
     ||| |||||||| |||| |||||| |||||||||    
T  6054211 acttatgaggtgatgattgtcctcacttataaaca 6054177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 8026687 - 8026629
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  8026687 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 8026629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 25065092 - 25065174
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| |  |||| |||||||||||| ||||||||| ||||||||||||| ||||  ||  | |||||||||||||    
T  25065092 ttcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttataaacatatt 25065174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 9705339 - 9705262
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || ||||  ||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  9705339 tcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 9705262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 11721990 - 11721913
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| |||| |||||||| ||||  || || |||||||||    
T  11721990 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaaca 11721913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 15082145 - 15082198
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||| ||||||| |||||||||| | ||||||||| |||||||||||||    
T  15082145 ttagaaatcgtgtttgggcctaacacaatcccacaaaaccggcttgtgaggtga 15082198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 19639112 - 19639189
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||||||||||||| || ||| ||||| | ||||||||||| |||| ||| || |||||||||    
T  19639112 tcttagaaatcgtggttggacctaacacagccccactaaaccggtttgtgaggtgaggattgtccccacttataaaca 19639189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 30656575 - 30656712
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||| |||| ||||||||||||| |||||||||||| |||| ||||   |||| ||||| ||| | || ||||| |||||||||     ||||||| |    
T  30656575 atagcgaaaacatgatagcaggtgacccaatagattttagagaggctcacgtatcatcttaaaaaccgtggttggatctaacacaattctccaaaaccgg 30656674  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
     |||||||||||  |||| | ||| |||||||||||||    
T  30656675 attgtgaggtgagaattaccttcacttataaacatatt 30656712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 17147659 - 17147719
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||  || |||||||||||| |||| ||||||||| ||||||||||||| ||||    
T  17147659 tcttagaaatggtggttggacctaacataaccccacaaaaccggcttgtgaggtgaggatt 17147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 377
Target Start/End: Complemental strand, 20661010 - 20660962
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    |||| ||||||||| |||||||||||||||| ||||||| |||||||||    
T  20661010 cggatacctgatagtaggtgatccaatagatcttggagaggctctgata 20660962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 8566960 - 8567034
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| | ||||||||||| |||| ||| || |||||||||    
T  8566960 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgtcc-cacttataaaca 8567034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Original strand, 12329949 - 12330020
Alignment:
Q  387 aaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| || |||| |||||||||||| ||||||| ||||||||||||||| ||||  || || |||||||||    
T  12329949 aaatcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaaca 12330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 27656541 - 27656466
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||  || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  27656541 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 27656466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 27773029 - 27772954
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||| |||| | |||||||| | ||||||||||||||||||||||| ||||  || || |||||||||    
T  27773029 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtgaggtgaggattgcccccacttataaaca 27772954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 2753328 - 2753266
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||| |||||||||||| |||||||||  |||||||||||| ||||| || || |||||||||    
T  2753328 ttgggcctaacacaaccccacaaaaccgccttgtgaggtgaggattacccccacttataaaca 2753266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 6400798 - 6400863
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatc 391  Q
    ||||| ||||||||||||||||||| || |||||||||||||| ||| ||||| | ||||| |||||    
T  6400798 atagcagaaacctgatagcaggtga-cccatagattttggagaggctttgataccatcttaaaaatc 6400863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 12330292 - 12330350
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||| ||| ||||    
T  12330292 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggatt 12330350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 31961084 - 31961030
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatc 379  Q
    ||||| ||||||||||||||||||  ||||| ||| ||||||| |||||||||||    
T  31961084 atagcagaaacctgatagcaggtggcccaatggatcttggagaggctctgatatc 31961030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 6542708 - 6542784
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||||| ||||||||||  |||||||| | ||||||||||| ||||  || ||||||||||||    
T  6542708 tcttagaaatcgtggttggacttaacacaaccctacaaaaccggtttgtgaggtgatgatt-gccccatttataaaca 6542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Complemental strand, 16570244 - 16570203
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  16570244 tcttagaaatcatggttgggcctaacacaaccccacaaaacc 16570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 19712858 - 19712722
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacaca--accgcacaaaac 421  Q
    |||| ||||||||||||| ||||||  ||||   ||  || ||| ||||||||| | ||||||||||  || |||| |||||||||  ||| ||||||||    
T  19712858 aataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatggtggttgggcctaacacacaaccccacaaaac 19712759  T
Q  422 cagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    | ||||||||||||| ||||  || || |||||||||    
T  19712758 cggcttgtgaggtgaggattgcccccacttataaaca 19712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 27653314 - 27653225
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || |||| |||||||||| | |||||||||  |||||||||||| ||||  || || |||||||||    
T  27653314 gctctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtgaggtgaggatttcccccacttataaaca 27653225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 1788925 - 1789009
Alignment:
Q  358 attttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatta 442  Q
    |||||| ||| ||||||||| | ||||||||||  ||  || |||||| |||||| |||||||| |  |||||||||||||||||    
T  1788925 attttgaagaggctctgataccatcttagaaatggtggctgaacctaatacaacctcacaaaacaaaattgtgaggtgaagatta 1789009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 4161845 - 4161905
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||  | ||||| ||||||||||    
T  4161845 tcttagaaatcgtggttgggcctaacacaaccccacaaaactggattgtgtggtgaagatt 4161905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 4223465 - 4223525
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||  | ||||| ||||||||||    
T  4223465 tcttagaaatcgtggttgggcctaacacaaccccacaaaactggattgtgtggtgaagatt 4223525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 5572386 - 5572438
Alignment:
Q  384 tagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||||||| || |||| |||||||||||| |||||||||  ||||||||||||    
T  5572386 tagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtga 5572438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 10145738 - 10145826
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| ||||||||||  || |||  ||||||||||||  |||||||   ||||||||||||| ||| |||  |||||||||||    
T  10145738 ctctgatatcatcttagaaattgtggttgagcctaacacaaccctacaaaactgacttgtgaggtgaaaattgtccctatttataaaca 10145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 12885154 - 12885082
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||| || | ||||||||| || || |||||||||||||| ||||||| ||||| || |||||| ||||    
T  12885154 gctctgatgtcatattagaaatcgtggttagacctaacacaaccccacaaaatcagctcgtaaggtgatgatt 12885082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 19713038 - 19712982
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||||||||||  || |||| |||||||||| | ||||||||| |||||||||||||    
T  19713038 ttcttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtgaggtga 19712982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 28867976 - 28868016
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  28867976 cctaacacaaccccacaaaaccggcttgtgaggtgaggatt 28868016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 30505643 - 30505591
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    |||| |||||||||||||||||||| |||||  || ||||||| |||||||||    
T  30505643 ataggggaaacctgatagcaggtgacccaatgcatcttggagaggctctgata 30505591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 325 - 464
Target Start/End: Original strand, 22231251 - 22231390
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||||||||||| ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| |    
T  22231251 atagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgg 22231350  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatattct 464  Q
    |||||||||||| ||||  || || ||||||| |||||||    
T  22231351 cttgtgaggtgaggattgcccccacttataaatatattct 22231390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 462
Target Start/End: Complemental strand, 6218345 - 6218208
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||| |||||||||||| ||| ||||||| ||||||||| | ||||||||||| || |||   ||||||||||  |||||||||      
T  6218345 atagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccatcttagaaatcgtggttgtgtctaacacaactccacaaaaccgt 6218246  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||||||||  || || |||||||||||||    
T  6218245 cttgtgaggtgaagattgcccccacttataaacatatt 6218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 34357973 - 34358106
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| || |||  ||||||||| ||| ||| ||||||||||| ||||||||||| ||||||  |||||||||||| ||||||||| |    
T  34357973 atagcggaaacctgataacaagtggcccaatagatcttgtagaggctctgatatcatcttagaaatcgtgtttgagcctaacacaaccccacaaaaccgg 34358072  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||| ||| |||| ||||  || ||||||||||||    
T  34358073 cttctgatgtgaggattgcccccatttataaaca 34358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 441
Target Start/End: Original strand, 50543512 - 50543626
Alignment:
Q  329 cggaaacctgatagcaggtgatccaata--gattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagct 426  Q
    |||||||||||||||||||| || ||||  ||| ||||||| ||||||||||| ||||||||||| || |||| |||||||||||  ||||||||| |||    
T  50543512 cggaaacctgatagcaggtggtcaaatatggatcttggagaggctctgatatcatcttagaaatcgtggttgggcctaacacaactccacaaaaccggct 50543611  T
Q  427 tgtgaggtgaagatt 441  Q
    |||||||||| ||||    
T  50543612 tgtgaggtgaggatt 50543626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 40717384 - 40717517
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||| |||||||  ||||| ||| ||||||| ||||||||| | ||||||||||| || |||| |||||||||||| |||||||||      
T  40717384 atagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccga 40717483  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||| |||||||| ||||  || || |||||||||    
T  40717484 cttttgaggtgaggattgcccccacttataaaca 40717517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 35788797 - 35788667
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||  ||| |||||| || |||||||| | ||||||||||| || |||| |||||||||||| || |||||| ||||    
T  35788797 cggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccataaaaccggctt 35788698  T
Q  428 gtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| ||||  || || |||||||||    
T  35788697 gtgaggtgaggattgcccccacttataaaca 35788667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 430
Target Start/End: Complemental strand, 7926469 - 7926364
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||| |||||||||||||||||||  ||||| ||| ||||||| ||||||||| | |||| |||||| || |||| ||||||||| || ||||||||| |    
T  7926469 atagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaacacagccccacaaaaccgg 7926370  T
Q  425 cttgtg 430  Q
    ||||||    
T  7926369 cttgtg 7926364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 4645783 - 4645667
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||| ||||| ||| || |||| |||||||||   ||||| |||||||| |||   ||||||||| | ||||||||| |    
T  4645783 atagcggaaacctgatagcaggtgacccaatggatctttgagaggctctgatactatcttataaatcatggttgagtctaacacaatcccacaaaaccgg 4645684  T
Q  425 cttgtgaggtgaagatt 441  Q
    ||||| |||||| ||||    
T  4645683 cttgtaaggtgatgatt 4645667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 5398475 - 5398535
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  5398475 tcttagaaatcatggttggacctaacacaaccccacaaaaccggcttgtgaggtgaggatt 5398535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 22231072 - 22231149
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||||||||| |||||| ||||||||| ||||||||||||| |||| ||| || |||||||||    
T  22231072 tcttagaaatcgtggttggacctaatacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaaca 22231149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 22845446 - 22845523
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||| || || |||||||||    
T  22845446 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaaca 22845523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 35796920 - 35797057
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||||||||  |||||| ||| | | ||| ||||||||| | ||||||||||  |  |||| | |||||||||| ||||||||  |    
T  35796920 atagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatggtagttgggcttaacacaaccccacaaaactgg 35797019  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
     ||||||||||| ||||  || || |||||||||||||    
T  35797020 tttgtgaggtgaggattgcccccacttataaacatatt 35797057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 52559652 - 52559575
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  52559652 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaaca 52559575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 32002463 - 32002348
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||| | ||||||| | ||||| ||||  |||||||  |||| |||||| |||||||||      
T  32002463 atagcggaaacctgatagcagatga-ccaatagatcttggagaggttctgataccatcttaaaaattgtgtttgggtctaatacaacctcacaaaaccga 32002365  T
Q  425 cttgtgaggtgaagatt 441  Q
     |||| |||||||||||    
T  32002364 tttgtaaggtgaagatt 32002348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 35819071 - 35819179
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| || ||||  |||||||  | ||||| ||||| || |||| |||||||||||| ||||||||  |    
T  35819071 atagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcgtggttgggcctaacacaacctcacaaaactgg 35819170  T
Q  425 cttgtgagg 433  Q
    |||||||||    
T  35819171 cttgtgagg 35819179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 53814675 - 53814750
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||| | ||||||||| ||||||||||||| |||||||| || |||||||||    
T  53814675 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggattatccccacttataaaca 53814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 14783137 - 14783263
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    |||||||||| ||||||  ||||   ||| || ||| ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||    
T  14783137 aaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 14783236  T
Q  432 ggtgaagattatcctcatttataaaca 458  Q
    ||||| ||||  || || |||||||||    
T  14783237 ggtgatgattgcccacagttataaaca 14783263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 9685535 - 9685406
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    ||||||||||||| ||||||  ||||   ||| || ||| ||||||||| | | ||||||||| || |||| |||||||||||| |||||||||  ||||    
T  9685535 cggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaaccgacttg 9685436  T
Q  429 tgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||||  || || |||||||||    
T  9685435 tgaggtgaggattggccccacttataaaca 9685406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 24513302 - 24513418
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||  |||||||||| || |||||||||| || ||| || |||||||||| | ||||||||| || |||| ||||||||||||  || |||||     
T  24513302 atagcggaagtctgatagcagatggtccaatagatcttagaggaggctctgatatcatgttagaaatcgtgattgggcctaacacaaccctac-aaaccg 24513400  T
Q  424 gcttgtgaggtgaagatt 441  Q
    ||||||||||||| ||||    
T  24513401 gcttgtgaggtgaggatt 24513418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 25052949 - 25052860
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||  ||||| || || |||||||||    
T  25052949 gctctgataccatgttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattacccccacttataaaca 25052860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 35609698 - 35609787
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | |||||||||||||| ||||  || |||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  35609698 gctctgataccatcttagaaatcatggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattggccccacttataaaca 35609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 39902562 - 39902639
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  || |||| |||||||||||| ||||||||||||||||||||||| ||||  || || |||||||||    
T  39902562 tcttagaaatggtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaaca 39902639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 50543316 - 50543389
Alignment:
Q  368 agctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||||||| ||||| ||||    
T  50543316 agctctgataacatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggatt 50543389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 4905679 - 4905795
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| ||||||| ||||||||||  ||||| ||  ||||||| ||||||||||| |||||||||||||| |||  ||||||| |||  || |||||  |    
T  4905679 atagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaatcatggttgagcctaacaaaactccaaaaaacggg 4905778  T
Q  425 cttgtgaggtgaagatt 441  Q
    ||||| |||||| ||||    
T  4905779 cttgttaggtgaggatt 4905795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 12869210 - 12869337
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    ||||||||||||| ||||||  |||| | ||  || |||  |||||||| | ||||||||||| || |||| |||||||||||| |||||||||  |||     
T  12869210 cggaaacctgataacaggtgggccaaaaaatcgtgaagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgtctta 12869309  T
Q  429 tgaggtgaagattatcctcatttataaa 456  Q
    |||||||| |||| ||| || |||||||    
T  12869310 tgaggtgaggattgtccccacttataaa 12869337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 458
Target Start/End: Complemental strand, 21498453 - 21498362
Alignment:
Q  367 aagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| | | ||||||||| || |||| ||||||| |||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  21498453 aagctctgataccatattagaaatcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 21498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 21498878 - 21498803
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  21498878 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 21498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 436
Target Start/End: Original strand, 28073180 - 28073235
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||  || |||| |||||||||||| |||||||||||||||||||||||    
T  28073180 tcttagaaattgtggttgggcctaacacaaccccacaaaaccagcttgtgaggtga 28073235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 433
Target Start/End: Complemental strand, 8902762 - 8902660
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaa-gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    |||||||||| ||||||  ||||||||| || ||||| ||||||||| | || ||| |||| || |||||||||||| |||| ||||||||  |||||||    
T  8902762 aaacctgataacaggtggcccaatagatcttagagaatgctctgataccatcctagcaatcgtggttggacctaacataaccccacaaaactggcttgtg 8902663  T
Q  431 agg 433  Q
    |||    
T  8902662 agg 8902660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 13555422 - 13555472
Alignment:
Q  327 agcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    |||||||||||||||||||||| |||||| ||| ||||||| |||||||||    
T  13555422 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgata 13555472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 28245704 - 28245770
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatc 391  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||| ||||||||| | | |||||||||    
T  28245704 atagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatc 28245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 434
Target Start/End: Original strand, 40716567 - 40716673
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttgga-gaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||  |||  |||| || ||||||||| | ||||||||| |||| |||| |||||||||||| |||||| || ||||    
T  40716567 cggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaaccatggttgggcctaacacaaccccacaaatccggctt 40716666  T
Q  428 gtgaggt 434  Q
    || ||||    
T  40716667 gtaaggt 40716673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 1518261 - 1518172
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | ||||||||||| || || | |||||||||||| ||||||||| ||||||||| ||| ||||  || || |||||||||    
T  1518261 gctctgataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgcccccacttataaaca 1518172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 461
Target Start/End: Original strand, 21750223 - 21750355
Alignment:
Q  328 gcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||| | ||||||| ||||||||||  |||||  ||| ||||||||| | ||||| || || || ||||  ||||||||||| ||||||||  | ||    
T  21750223 gcggaaatcagatagcatgtgatccaatgaattttaaagaggctctgataccatcttaaaattcgtgattgggtctaacacaacctcacaaaactggttt 21750322  T
Q  428 gtgaggtgaagattatcctcatttataaacatat 461  Q
    |||||||||  |||||||  ||||||||||||||    
T  21750323 gtgaggtgagaattatcc-aatttataaacatat 21750355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 22827623 - 22827546
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| ||||||||||||  |||||||| ||||||||||||| ||||  || || |||||||||    
T  22827623 tcttagaaatcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 22827546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 22863559 - 22863482
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||| ||||| ||||  || || |||||||||    
T  22863559 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaaca 22863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 35788979 - 35788902
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||| ||| ||||  || || |||||||||    
T  35788979 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaaca 35788902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 35796741 - 35796818
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  || |||||| |||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  35796741 tcttagaaatggtggttggacttaacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 35796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 41853439 - 41853399
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  41853439 cctaacacaacctcacaaaactagcttgtgaggtgaagatt 41853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 9685715 - 9685640
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| || |||||| ||||||||||||| ||||  || || |||||||||    
T  9685715 ttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaaca 9685640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 17111659 - 17111588
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||| | ||||||||||| || |||| |||||||||||| ||||||||||| || | |||||| ||||    
T  17111659 ctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccagtttttaaggtgaggatt 17111588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 28245527 - 28245602
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| |  |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  28245527 ttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 28245602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 387
Target Start/End: Original strand, 9908778 - 9908836
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttaga 387  Q
    |||||| ||||||||||||| |||||||||| |||||||  |||||||| | |||||||    
T  9908778 cggaaatctgatagcaggtggtccaatagatcttggagagactctgataccatcttaga 9908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 22822420 - 22822358
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| |||||||||||||||| ||||||| ||||| ||||  || || |||||||||    
T  22822420 ttggacctaatacaaccgcacaaaaccggcttgtgtggtgaggatttcccccacttataaaca 22822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 52827412 - 52827462
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaa 419  Q
    ||||||||| | |||||||||||||| |||| |||||||||||| ||||||    
T  52827412 gctctgataccatcttagaaatcatggttgggcctaacacaacctcacaaa 52827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 11036689 - 11036822
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||| |||| |||||  ||||| ||| || |||  ||||||||| | ||||| ||||  || || | |||||||||||| |||| || | |    
T  11036689 atagcggaaacctaatagtaggtggcccaatggatcttagagtggctctgataccatcttaaaaattgtggttaggcctaacacaaccccacacaatcgg 11036788  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  11036789 cttgtgaggtgaggattgcccccacttataaaca 11036822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 12869048 - 12869105
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  12869048 cctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaaca 12869105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 20822056 - 20822003
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||| || |||| |||||||||| | ||||||||| |||||||||||||    
T  20822056 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtga 20822003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 458
Target Start/End: Complemental strand, 23209934 - 23209849
Alignment:
Q  373 tgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||| ||||||||||| || |||| |||||| |||||  |||||  |||||||||| |||| |||||  |||| |||||||||    
T  23209934 tgatatcatcttagaaatcgtgattgggcctaactcaaccctacaaattcagcttgtgatgtgaggattacactcacttataaaca 23209849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 26549720 - 26549671
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgag 432  Q
    |||||||||||| |||||||| |||||||  ||||||||| |||||||||    
T  26549720 ttagaaatcatgattggacctgacacaacaccacaaaaccggcttgtgag 26549671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 30530105 - 30530170
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaat 390  Q
    |||||||||| |||||||||||||  | ||| ||| ||||||| ||||||||| | ||||||||||    
T  30530105 atagcggaaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaat 30530170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 53559288 - 53559349
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| || |||| |||||||||||| ||||||| | |||||| |||||| ||||    
T  53559288 ttcttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggatt 53559349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 53814916 - 53815005
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || |||| | |||||||||| |||||||||  |||||||||||| ||||  || || |||||||||    
T  53814916 gctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaaca 53815005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 53828510 - 53828599
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | ||||||||||  || |||| |||||||||||| ||||||| | |||| |||||||| ||||  || || |||||||||    
T  53828510 gctctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaaca 53828599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 27634259 - 27634311
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    ||||| |||||||||||||| ||| |||||| ||| ||||||| |||||||||    
T  27634259 atagcagaaacctgatagcaagtggtccaatggatcttggagaggctctgata 27634311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 31945063 - 31944929
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaac--c 422  Q
    ||||| ||||||| |||||| ||| || ||||||| |||||||  ||||||| || | ||||||||  | ||||| |||| ||||| | ||||||||  |    
T  31945063 atagcagaaacctaatagcatgtggtc-aatagatcttggagagactctgatgtcattttagaaattgtatttgggcctatcacaatcccacaaaactgc 31944965  T
Q  423 agcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| |||||||| ||  || |||||||||    
T  31944964 agcttgtgagatgaagattgtctccacttataaaca 31944929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 40726806 - 40726746
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||| |  |||||||| ||||||||||||| ||||    
T  40726806 tcttagaaatcgtggttgggcctaacacaatcctacaaaaccggcttgtgaggtgaggatt 40726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 41187931 - 41187991
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| | |||| ||||| |||||||||| |||||||||||| ||||    
T  41187931 tcttagaaatcgtggttgggcataactcaaccccacaaaaccaacttgtgaggtgaggatt 41187991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 44118879 - 44118935
Alignment:
Q  402 ctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| ||||||||  ||||||||||||| ||||| || || |||||||||    
T  44118879 ctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaaca 44118935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 52559890 - 52559834
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||||||| |||| ||||| |||| |  |||||||| |||||||||||||    
T  52559890 ttcttagaaatcatggttgggcctaatacaatcctacaaaaccggcttgtgaggtga 52559834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 25620278 - 25620144
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||| ||||||||| | ||||||||||| || |||| |||||||||||| |||||||||     
T  25620278 aatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccg 25620179  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| ||||  || || |||||||||    
T  25620178 gcttgtgaggtgaggattgcccccacttataaaca 25620144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 462
Target Start/End: Complemental strand, 10903226 - 10903089
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||| ||||| ||||||  ||||| ||| ||||||||||||||||||| | |||| |||| || ||||  ||||||||||  ||||||||| |    
T  10903226 atagcggaaacatgataacaggtggcccaatggatcttggagaagctctgatatcattttagtaatcgtggttggggctaacacaactccacaaaaccgg 10903127  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| ||||| ||  | |||||||||||||    
T  10903126 cttgtgaggtgaggattacccctacttataaacatatt 10903089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 21861435 - 21861302
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| ||||||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||| | ||||||||| |    
T  21861435 atagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaatcccacaaaaccgg 21861336  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  ||||| |||||||||    
T  21861335 cttgtaaggtgaggattgccctcacttataaaca 21861302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 437
Target Start/End: Complemental strand, 28080805 - 28080693
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||| ||||||||||||  ||||||||| ||| ||| ||||||||||| ||||||||||| || ||||| |||||| |||| |||||||||      
T  28080805 atagcggaaacttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgtggttggatctaacataaccccacaaaaccga 28080706  T
Q  425 cttgtgaggtgaa 437  Q
    ||||||| |||||    
T  28080705 cttgtgaagtgaa 28080693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 29469746 - 29469613
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||| ||||||| ||||||  ||||| ||| ||||||| ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| |    
T  29469746 atagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccgg 29469647  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  29469646 cttgtaaggtgaggattgcccccacttataaaca 29469613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 36277169 - 36277302
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||| |||||  ||||| ||| ||||||| ||||||||| | ||||||||||| || ||||  ||||||||||| ||||||| |      
T  36277169 atagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcgtggttgggactaacacaaccccacaaaatcga 36277268  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  36277269 cttgtgaggtgaggattgcccccacttataaaca 36277302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 441
Target Start/End: Original strand, 33996260 - 33996370
Alignment:
Q  328 gcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    |||||||||||||||||||||  ||||| |||   ||||| ||||||||| | ||||||||||| || |||| |||||||||||  |||||||||  |||    
T  33996260 gcggaaacctgatagcaggtggcccaatggat---ggagaggctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaaccgactt 33996356  T
Q  428 gtgaggtgaagatt 441  Q
    ||||||||||||||    
T  33996357 gtgaggtgaagatt 33996370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 462
Target Start/End: Complemental strand, 4886464 - 4886333
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    ||||| ||||||||||||  ||||| ||| |||||||  | |||||| | ||||||||||| || |||| |||||||||||| | | ||||| |||||||    
T  4886464 gaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaatcgtggttgggcctaacacaacctcgccaaaccggcttgtg 4886365  T
Q  431 aggtgaagattatcctcatttataaacatatt 462  Q
    |||||| ||||  || |||| |||||||||||    
T  4886364 aggtgaggattgcccccattaataaacatatt 4886333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 381 - 436
Target Start/End: Original strand, 36993073 - 36993128
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  36993073 tcttagaaatcatggttgggcctaacacaaccccacaaaaccagcttgtgaggtga 36993128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 3038071 - 3038160
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  |||||||||||||| |||| |||||||||||| ||||||||| |||||||| |||| ||||  || || |||||||||    
T  3038071 gctctgatattatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaaca 3038160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 18826475 - 18826564
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| |||||||||| ||| ||| ||||||||||||| ||||||| ||||||||||| |||  |||| || || |||||||||    
T  18826475 gctctgatatcatcttagaaattatggttgaacctaacacaaccccacaaaatcagcttgtgagttgagaattacccccacttataaaca 18826564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 31892478 - 31892397
Alignment:
Q  375 atatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaa 456  Q
    |||| |||||||||||| || |||| ||||||||| || ||||||||| |||||||||||||||||| ||| || |||||||    
T  31892478 atatattcttagaaatcgtggttgggcctaacacatccccacaaaaccggcttgtgaggtgaagattgtccccacttataaa 31892397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 456
Target Start/End: Complemental strand, 31892289 - 31892161
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatc-atgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||||| | ||||||| ||||||||  | ||||||| |||   |||||| ||||||| |||  ||||||||| ||||    
T  31892289 cggaaacctgatagcaggtggcccaataggtcttggagaggctctgattccatcttagagatcggggtttgggcctaacataactccacaaaaccggctt 31892190  T
Q  428 gtgaggtgaagattatcctcatttataaa 456  Q
    ||||||||| |||| ||| || |||||||    
T  31892189 gtgaggtgaggattgtccccacttataaa 31892161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 33834325 - 33834237
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaa 420  Q
    |||||||||||||||||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| |||||||    
T  33834325 aaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 2404350 - 2404417
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatc 391  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||| ||||||||| | |||||||||||    
T  2404350 aatagcggaaacctgatagcaggtgacccaatggatttcgaagaggctctgataccatcttagaaatc 2404417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 410
Target Start/End: Original strand, 36993250 - 36993336
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaa 410  Q
    ||||||||||| ||||||||| |||  ||||| ||| ||| ||| ||||||||| | |||||||||||||| ||||| |||||||||    
T  36993250 aatagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatcttagaaatcatggttggatctaacacaa 36993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 441
Target Start/End: Original strand, 48661500 - 48661614
Alignment:
Q  327 agcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagct 426  Q
    ||||||||||||||||||||||   |||| | | ||  ||| ||||||||||| | ||||||||| || ||||  ||||||||| | ||||||||| |||    
T  48661500 agcggaaacctgatagcaggtggctcaatggttcttaaagaggctctgatatcatattagaaatcgtggttgggtctaacacaatctcacaaaaccggct 48661599  T
Q  427 tgtgaggtgaagatt 441  Q
    |||||||||| ||||    
T  48661600 tgtgaggtgaggatt 48661614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 6634940 - 6634863
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||||| |||| |||||||||||| |||||||| ||||| |||||||| ||||  || || |||||||||    
T  6634940 tcttagaaatcatggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgcccccacttataaaca 6634863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 21054952 - 21055033
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||  || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||||||    
T  21054952 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatatt 21055033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 1596734 - 1596619
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| || |||  ||||| ||| ||||||| ||||||||| | ||||||||||  || || | |||||||||||| ||| ||||| |    
T  1596734 atagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaattgtggttaggcctaacacaaccccac-aaaccgg 1596636  T
Q  425 cttgtgaggtgaagatt 441  Q
    ||||| |||||| ||||    
T  1596635 cttgtaaggtgaggatt 1596619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 34027476 - 34027401
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  34027476 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 34027401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 6001613 - 6001695
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaaca 407  Q
    |||| |||||||||||||||| ||| | |||| |||||| ||| ||||||||| | ||||||||||| || |||||| |||||    
T  6001613 ataggggaaacctgatagcagatgacctaataaattttgaagaggctctgataccatcttagaaatcgtggttggacttaaca 6001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 427
Target Start/End: Original strand, 7786253 - 7786299
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||    
T  7786253 tcttagaaatcatggttgggcctaacacaaccccacaaaaccagctt 7786299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 9689045 - 9689095
Alignment:
Q  327 agcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    |||||||||||||||||||||| |||||| ||| ||||||| |||||||||    
T  9689045 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgata 9689095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 462
Target Start/End: Complemental strand, 21821948 - 21821810
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||||||||||| |||||| ||  ||||   || ||| ||| ||||||||| | ||||||||||| || |||| |||||||||| | ||||||| |     
T  21821948 aatagcggaaacctgctagcagttggcccaacgtatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcg 21821849  T
Q  424 gcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    | ||||||| ||||||||  || || |||| ||||||||    
T  21821848 gtttgtgagatgaagattgcccccacttattaacatatt 21821810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 26239862 - 26239992
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||  ||| |||||| || |||||||| | ||||||||||  || ||||  ||||||||||| ||||| |||  |||    
T  26239862 cggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaaccccacaataccgactt 26239961  T
Q  428 gtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| ||||  || || |||||||||    
T  26239962 gtgaggtgaggattgcccccacttataaaca 26239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 431
Target Start/End: Original strand, 31257250 - 31257316
Alignment:
Q  365 agaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    ||||||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||    
T  31257250 agaagctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 31257316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 32279014 - 32279068
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatc 379  Q
    |||||| |||||||||||||||||  |||||| |||||||||| |||||||||||    
T  32279014 atagcgaaaacctgatagcaggtggcccaataaattttggagaggctctgatatc 32279068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 34027713 - 34027635
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||||||| |||| ||||  || || |||||||||    
T  34027713 ttcttagaaatcgtgattgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgcccccacttataaaca 34027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 48243059 - 48243137
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||| ||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  48243059 ttcttacaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 48243137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 441
Target Start/End: Complemental strand, 4507069 - 4506957
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    |||||| |||||||||||||| ||||| ||| ||| | | |||||||||   ||||||||||| |  ||||  ||||||||||| || ||||||  ||||    
T  4507069 cggaaatctgatagcaggtgacccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaaccccataaaaccgacttg 4506970  T
Q  429 tgaggtgaagatt 441  Q
    |||||||| ||||    
T  4506969 tgaggtgaggatt 4506957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 4507229 - 4507169
Alignment:
Q  402 ctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||| |  ||||||||||||||||| ||||||||| ||| || |||||||||||||    
T  4507229 ctaacacaatcctacaaaaccagcttgtgaagtgaagattgtccccacttataaacatatt 4507169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 40121911 - 40121971
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgt 429  Q
    ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||||||    
T  40121911 gctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgt 40121971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 40746581 - 40746529
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtg 435  Q
    |||||||||||| |||| |||||||||||| ||||||||  ||||||||||||    
T  40746581 ttagaaatcatggttgggcctaacacaacctcacaaaactggcttgtgaggtg 40746529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 458
Target Start/End: Complemental strand, 8075938 - 8075867
Alignment:
Q  387 aaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| || |||||||| |||||||  || ||||||  ||||||||||||||||||||| || |||||||||    
T  8075938 aaatcgtggttggacctgacacaactccataaaaccgacttgtgaggtgaagattatccccacttataaaca 8075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 6782960 - 6782886
Alignment:
Q  367 aagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| | | ||||||||| || |||  |||||||||||| ||||||||| |||||| |||||| ||||    
T  6782960 aagctctgataccatgttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggatt 6782886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 15317638 - 15317560
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| ||| |||| |||||||||||  |||||||| || ||||||||||| ||||  || || |||||||||    
T  15317638 ttcttagaaattatggttgggcctaacacaacaccacaaaactagtttgtgaggtgaggattgcccccacttataaaca 15317560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 30727116 - 30727194
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||  || |||| ||||||  ||||| |||||||||||||||||||||| ||||  || || |||||||||    
T  30727116 ttcttagaaattgtggttgggcctaacttaaccgtacaaaaccagcttgtgaggtgaggattgcccccacttataaaca 30727194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 41191084 - 41191018
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||||||| | ||||||||| |||||||| |||| ||||   |||| |||||||||||||    
T  41191084 ttggacctaacacaatctcacaaaaccggcttgtgatgtgaggattgctctcacttataaacatatt 41191018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 43085535 - 43085613
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||  | |||||||||| |||||||||| |||||||||||| ||||  || || |||||||||    
T  43085535 ttcttagaaatcgtggttgagcttaacacaaccccacaaaaccaacttgtgaggtgaggattgcccccacttataaaca 43085613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 1794003 - 1793950
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||| || |||| || ||||||||||||||||||  |||||||||||||    
T  1794003 ttagaaatcgtggttgggcccaacacaaccgcacaaaactggcttgtgaggtga 1793950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 23839096 - 23839153
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  23839096 cctaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 23839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 26562092 - 26562149
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||| |||| ||||||||| ||||||||||||||||||  || || |||||||||    
T  26562092 cctaacataaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaaca 26562149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 32278904 - 32278961
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||||||| |||| |||||||| |||| ||| || |||||||||    
T  32278904 cctaacacaacctcacaaaaccggcttatgaggtgacgattgtccccacttataaaca 32278961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 47710528 - 47710451
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  || |||| |||||||||||| ||||||||  ||||||||||||| ||||  || || |||||||||    
T  47710528 tcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaaca 47710451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 47722184 - 47722107
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  || |||| |||||||||||| ||||||||  ||||||||||||| ||||  || || |||||||||    
T  47722184 tcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaaca 47722107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 48243425 - 48243513
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| | ||||| |||||||| ||||  ||||||||||| ||||||||| |||||| || ||| ||||  || || |||||||||    
T  48243425 ctctgataccatcttaaaaatcatggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaaca 48243513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 329 - 441
Target Start/End: Original strand, 25145667 - 25145779
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    ||||||||||||||||||||   |||||||| ||||||| ||||||||||| |||||||||||||| |||| |||||||||||| |||||| || |||||    
T  25145667 cggaaacctgatagcaggtgggtcaatagatcttggagaggctctgatatcatcttagaaatcatggttgggcctaacacaaccccacaaatccggcttg 25145766  T
Q  429 tgaggtgaagatt 441  Q
    |||||||| ||||    
T  25145767 tgaggtgaggatt 25145779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 27413488 - 27413372
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||| |||||| |||||| || ||||||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||| ||||||| | |    
T  27413488 atagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcatcttagaaatcgtggttggacctaacacaacctcacaaaatcgg 27413389  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  27413388 cttgtgaggtgaggatt 27413372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 462
Target Start/End: Complemental strand, 30369976 - 30369839
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||| |||||||||||||||||||| ||||| ||| ||||||| |||||||||   ||||||||||| || |||| |||||||||||| |||||||| |     
T  30369976 atagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgtggttgggcctaacacaaccccacaaaactat 30369877  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| ||||  ||  | |||||||||||||    
T  30369876 cttgtgaggtgaggattgcccctacttataaacatatt 30369839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 442
Target Start/End: Original strand, 51460385 - 51460502
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||| ||||||||||| | |||||||| ||| |||| |||||||||||| ||||||||  |    
T  51460385 atagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcattttagaaattatggttgggcctaacacaaccccacaaaactgg 51460484  T
Q  425 cttgtgaggtgaagatta 442  Q
    ||||| | ||||||||||    
T  51460485 cttgtaaagtgaagatta 51460502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 455
Target Start/End: Complemental strand, 26177049 - 26176919
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||| |||||||||||||  ||||| ||| ||||||| ||||||||||| |||||||||||  | |||| |||||||||||| ||||||||| |    
T  26177049 atagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcgcggttgggcctaacacaaccccacaaaaccgg 26176950  T
Q  425 cttgtgaggtgaagattatcctcatttataa 455  Q
     || |||||||| ||||  ||||| ||||||    
T  26176949 tttttgaggtgaggattgccctcacttataa 26176919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 432
Target Start/End: Complemental strand, 38733292 - 38733185
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||||||||| |||||| ||| |||||||  |||||||| | ||||||||||| || ||| ||||||||||| | |||||||||      
T  38733292 atagcggaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgaacctaacacaatctcacaaaaccga 38733193  T
Q  425 cttgtgag 432  Q
    ||||||||    
T  38733192 cttgtgag 38733185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 458
Target Start/End: Original strand, 4112948 - 4113082
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||||||||||||  ||||   |||| ||| ||||||| |||| |||| | ||||||||||| || |||| |||||||||||| |||||||||     
T  4112948 aatagcggaaacctgatagatggtggctcaatggatcttggagaggctccgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccg 4113047  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| ||||  || || |||||||||    
T  4113048 gcttgtgaggtgaggattgcccccacttataaaca 4113082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 33156875 - 33156758
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||||||||||||||||||||| ||||  ||| |||||| || |||| ||| | ||||||||||| || |||| |||||||||||| |||||||||     
T  33156875 atagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccg 33156776  T
Q  424 gcttgtgaggtgaagatt 441  Q
    | ||||||| ||| ||||    
T  33156775 gtttgtgagatgaggatt 33156758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 35772170 - 35772054
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||||||||||||||||| ||  ||||| ||| ||| ||||| |||||||| | ||||||||||| || |||| |||||||||||| |||||||||     
T  35772170 atagcggaaacctgatagcagatggcccaatggatcttg-agaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccg 35772072  T
Q  424 gcttgtgaggtgaagatt 441  Q
    ||||| ||||||| ||||    
T  35772071 gcttgcgaggtgaggatt 35772054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 441
Target Start/End: Original strand, 17452797 - 17452887
Alignment:
Q  351 ccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||| |||||| |||| ||||| ||| | ||||||||||| || || | |||||||||||| ||||||||| ||||||||||||||||||    
T  17452797 ccaatggattttagagaggctctaataccatcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagatt 17452887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 26173399 - 26173501
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||||||||| ||| || ||| | | ||| ||||||||||| | |||||||   || ||||||||||||||||| ||||||||| |    
T  26173399 atagcggaaacctgatagcaggtggtccgatggatatcgaagaggctctgatatcattttagaaagggtggttggacctaacacaaccccacaaaaccgg 26173498  T
Q  425 ctt 427  Q
    |||    
T  26173499 ctt 26173501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 39348295 - 39348428
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||| |||||||||||||||||||  ||||| ||  |||||| || |||||||| | ||||||||||| |||| || |||||||||||| |||||||||     
T  39348295 atagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatcgtgttggg-cctaacacaaccccacaaaaccg 39348393  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    | ||||||||||| ||||  || || |||||||||    
T  39348394 gtttgtgaggtgaggattgcccccacttataaaca 39348428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 442
Target Start/End: Original strand, 2859570 - 2859687
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| ||||||| |||| |||||  ||||| ||| ||| ||| ||||| ||| | |||||||||| ||| ||||  ||||||||||| ||||||||| |    
T  2859570 atagcagaaacctaatagaaggtggcccaatggatcttgaagaggctctaataccatcttagaaatgatggttggggctaacacaacctcacaaaaccgg 2859669  T
Q  425 cttgtgaggtgaagatta 442  Q
    |||||||||||| |||||    
T  2859670 cttgtgaggtgaggatta 2859687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 4112718 - 4112783
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaat 390  Q
    |||||||||||||||||||||||| |||||| ||| ||||||| ||||||||| | ||||||||||    
T  4112718 atagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatcttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 436
Target Start/End: Complemental strand, 25255445 - 25255341
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    ||||||| |||||| |||||| | ||||| ||| ||| | ||||||| | ||||||||||| || |||| |||||||||||| ||||||||| |||||||    
T  25255445 gaaacctaatagcatgtgatctagtagatattgaagaggatctgata-catcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtg 25255347  T
Q  431 aggtga 436  Q
    ||||||    
T  25255346 aggtga 25255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 38668266 - 38668133
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| ||||||||||| ||||||| ||||| |||  |||||| ||||||||| | ||||||||||  || |||| |||||||||||| |||||||   |    
T  38668266 atagcagaaacctgataacaggtgacccaatggatcatggagaggctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaattgg 38668167  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||| ||||  || || |||||||||    
T  38668166 cttgtgagatgatgattgcccccacttataaaca 38668133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 52650770 - 52650847
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||| ||||  || || |||||||||    
T  52650770 tcttagaaattatggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaaca 52650847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 3169862 - 3169774
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||||||||  || || |||||||||    
T  3169862 ctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaaca 3169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 436
Target Start/End: Original strand, 8870865 - 8870964
Alignment:
Q  337 tgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||||  ||||| ||| |||||||  |||||||| | ||||||||||  || ||||||||||||||||| ||||||| | |||| ||||||||    
T  8870865 tgatagcaggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaacacaaccccacaaaaacggcttatgaggtga 8870964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 29266050 - 29265983
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||| | ||||||||||| || |||| |||||||||||| |||||||||||||||| ||||||    
T  29266050 gctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccagcttgtaaggtga 29265983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 458
Target Start/End: Complemental strand, 51589325 - 51589234
Alignment:
Q  367 aagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| | | ||||||||| || || | |||||||||||| ||||||||| ||||||||||||| ||||  ||||| |||||||||    
T  51589325 aagctctgataccatattagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaaca 51589234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 52127803 - 52127745
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  52127803 ttagaaatcgtggttggacctaacacaaccccacaaaagcagcttgtgaggtgaggatt 52127745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 52961664 - 52961590
Alignment:
Q  384 tagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| ||||||||||||||||| || |||||| |||| |||||||| ||||  ||||| |||||||||    
T  52961664 tagaaatcatggttggacctaacacaaccccataaaaccggcttttgaggtgaggattgccctcacttataaaca 52961590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 4098346 - 4098478
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| |||||||||| |||||||  ||||| ||| ||| |||  |||||||| |  |||||||||| || |||| |||||||||||| ||||||||||     
T  4098346 atagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaacttagaaatcgtggttgggcctaacacaacc-cacaaaaccaa 4098444  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  4098445 cttgtaaggtgaggattgcccccacttataaaca 4098478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 15986332 - 15986409
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  || ||||||||||||||||| ||||| ||||||||||||||||| ||||  || || |||||||||    
T  15986332 tcttagaaatggtggttggacctaacacaaccccacaataccagcttgtgaggtgaggattgcccccacttataaaca 15986409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 40079237 - 40079160
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  40079237 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 40079160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 41035826 - 41035907
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||| |  ||||||||||||||| | ||||||||| ||||||||||||| ||||  || || |||||||||||||    
T  41035826 tcttagaaatcgtagttggacctaacacaatcccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatatt 41035907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 51589903 - 51589814
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || |||| |||||||||||| ||||||| | ||||||||||||| ||||  ||||| |||||||||    
T  51589903 gctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttataaaca 51589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 456
Target Start/End: Complemental strand, 5109320 - 5109261
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaa 456  Q
    ||||||||||||||| | ||||||| || ||||||||||||||||||| ||||||||||||    
T  5109320 ttggacctaacacaatcccacaaaaacaacttgtgaggtgaagattat-ctcatttataaa 5109261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 32783224 - 32783340
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| |||||||||||||||||| | |||| ||| ||| |||  |||||||| | ||||||||||| || ||||| |||||| ||   || ||||| ||    
T  32783224 atagcagaaacctgatagcaggtggtacaatggatcttgaagagactctgataccatcttagaaatcgtggttggatctaacaaaattccataaaactag 32783323  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||| ||||||||    
T  32783324 cttgtgagatgaagatt 32783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 51589075 - 51589000
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||  || |||| |||||||||||| ||||||||| ||||||||||||| ||||  ||||| |||||||||    
T  51589075 ttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaaca 51589000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 2120172 - 2120114
Alignment:
Q  371 tctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgt 429  Q
    ||||||||| ||||||||||| || ||||||||||||||||| |||||||  |||||||    
T  2120172 tctgatatcatcttagaaatcgtgattggacctaacacaaccccacaaaatgagcttgt 2120114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 12244976 - 12245038
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  12244976 ttggacctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 12245038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 17452680 - 17452738
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  17452680 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 17452738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 38733468 - 38733386
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| |  |||| |||||||||||| ||||||||| || | |||||||| ||||  ||||| |||||||||||||    
T  38733468 ttcttagaaatcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgccctcacttataaacatatt 38733386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 31432229 - 31432289
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||| ||||||| ||||||||| ||||||||||||| ||||    
T  31432229 tcttagaaatcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggatt 31432289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 455
Target Start/End: Original strand, 5953751 - 5953810
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataa 455  Q
    |||| ||||| |||||| ||| |||||||||||| ||||||||||| |||||| ||||||    
T  5953751 ttgggcctaatacaacctcactaaaccagcttgttaggtgaagattgtcctcacttataa 5953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 420
Target Start/End: Complemental strand, 16163074 - 16162979
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaa 420  Q
    ||||||||||||||||||||||||  ||| | ||| ||||||| ||| ||||||| ||||| ||||  || |||   ||||||||||| |||||||    
T  16163074 atagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaaaattgtggttgagtctaacacaaccccacaaaa 16162979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 40316051 - 40316126
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || ||||| ||||||||||| ||||||||| |||| |||||||| ||||  || || |||||||||    
T  40316051 ttagaaatcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattgaccccacttataaaca 40316126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 436
Target Start/End: Complemental strand, 43409891 - 43409836
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||| || |||||| |||||||||| | ||||||| |||||||||||||    
T  43409891 tcttagaaatcgtggttggacataacacaaccccccaaaaccggcttgtgaggtga 43409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 856051 - 855989
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||| |||||||||| | ||||||||||||||||||||||| |||| ||| ||  ||||||||    
T  856051 ttgggcctaacacaatctcacaaaaccagcttgtgaggtgaggattgtccccacgtataaaca 855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 29898998 - 29898920
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||| ||||||| ||||||||| ||||||| |||||  |||  ||||| |||||||||    
T  29898998 ttcttagaaatcgtggttgggcctagcacaacctcacaaaaccggcttgtgtggtgagaattgccctcacttataaaca 29898920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 31181527 - 31181589
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||| |||||||||||| || |||||||||||||||||||| ||||  || || |||||||||    
T  31181527 ttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaaca 31181589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 51590121 - 51590063
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || |||| |||||||||| | ||||||||| ||||||||||||| ||||    
T  51590121 ttagaaatcgtgcttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggatt 51590063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 32031969 - 32031904
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcct 446  Q
    ||||| |||||||  || ||||||||||| ||  |||||||| |||||||||||||||||| ||||    
T  32031969 tcttacaaatcatagttcgacctaacacatccctacaaaacctgcttgtgaggtgaagattgtcct 32031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 35772349 - 35772296
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggt 434  Q
    ||||||||||| || |||| |||||||||||| ||||||||| |||| ||||||    
T  35772349 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggt 35772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 42586437 - 42586498
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| || |||| |||||||||||| |||||||   ||||||||||||| ||||    
T  42586437 ttcttagaaatcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggatt 42586498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 52907445 - 52907392
Alignment:
Q  405 acacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||||||||||||||||||||||| ||||  || || |||||||||    
T  52907445 acacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaaca 52907392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 436
Target Start/End: Complemental strand, 7307863 - 7307751
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||||||||||||||||||  || ||||| ||| ||| ||   || ||||||| |||||||||| ||| || | ||||||| || |  ||||||||     
T  7307863 aatagcggaaacctgatagcagacgacccaatggatcttgaagtgactatgatatcatcttagaaattatggttaggcctaacataatccaacaaaaccg 7307764  T
Q  424 gcttgtgaggtga 436  Q
     ||||||||||||    
T  7307763 acttgtgaggtga 7307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 25145484 - 25145544
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || ||||  ||||||||||| |||||||||  |||||||||||| ||||    
T  25145484 tcttagaaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggatt 25145544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 34600989 - 34600933
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||||| |||||||| ||| ||||||||||||| ||||||| || ||| ||||||||    
T  34600989 ttcttaaaaatcatggttgaacctaacacaacctcacaaaatcaacttatgaggtga 34600933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 42351858 - 42351914
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||||||| |||| || ||||||||  ||||||||  |||||||||||||    
T  42351858 ttcttagaaatcatggttgggcccaacacaacaccacaaaactggcttgtgaggtga 42351914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 52961488 - 52961436
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    ||||||||||||||||||||||||  ||||| ||| ||| ||| |||||||||    
T  52961488 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgata 52961436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 15480464 - 15480330
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||||||||||||||||||  ||||| ||| ||| ||| ||||||||| | ||||||||||| || |||| ||||||| |||| ||||||||||    
T  15480464 aatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaacca 15480365  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| ||||  || || |||||||||    
T  15480364 gcttgtgaggtgaggattgcccccacttataaaca 15480330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 9368737 - 9368620
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||||||||||||||||||  ||||| ||| ||| ||| ||||||||| |  ||||||||| ||| |||| |||||||||||| |||||||||     
T  9368737 aatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaccttagaaattatggttgggcctaacacaaccccacaaaaccg 9368638  T
Q  424 gcttgtgaggtgaagatt 441  Q
    ||||||||||||| ||||    
T  9368637 gcttgtgaggtgaggatt 9368620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 339 - 458
Target Start/End: Complemental strand, 24528667 - 24528548
Alignment:
Q  339 atagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaag 438  Q
    |||||||||| |||||| |||  |||||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||| |    
T  24528667 atagcaggtggtccaatggatcatggagaggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgagg 24528568  T
Q  439 attatcctcatttataaaca 458  Q
    |||  || || |||||||||    
T  24528567 attgcccccacttataaaca 24528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 25258244 - 25258381
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||| | ||||||||||| || |||    |||||||||| |||||||||      
T  25258244 atagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaaccga 25258343  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| ||||  || || | |||||||||||    
T  25258344 cttgtgaggtgaggattgcccccactgataaacatatt 25258381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 25322034 - 25322171
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||| | ||||||||||| || |||    |||||||||| |||||||||      
T  25322034 atagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaaccga 25322133  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| ||||  || || | |||||||||||    
T  25322134 cttgtgaggtgaggattgcccccactgataaacatatt 25322171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 41666939 - 41667069
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||  ||| |||||| || |||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||||    
T  41666939 cggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggctt 41667038  T
Q  428 gtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| ||||  || || |||||||||    
T  41667039 gtgaggtgaggattgcccccacttataaaca 41667069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 442
Target Start/End: Original strand, 18333642 - 18333759
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||| |||||||||||||||||  || || ||| ||| ||| ||||||||| | |||||||| || || |||| |||||||||||| ||||||||| |    
T  18333642 atagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcgtggttgggcctaacacaaccccacaaaaccgg 18333741  T
Q  425 cttgtgaggtgaagatta 442  Q
    |||||||||||| |||||    
T  18333742 cttgtgaggtgacgatta 18333759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 2063683 - 2063784
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    ||||||||||| || |||||||||| ||| ||| ||| ||||||||| | ||||||||||| || |||| |||||||||||| |||||||||  ||||||    
T  2063683 gaaacctgataacatgtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtg 2063782  T
Q  431 ag 432  Q
    ||    
T  2063783 ag 2063784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 24346683 - 24346791
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||| ||| |||||| || |||||||| | ||||| ||||| || ||||  ||||||||||| ||||||||| ||||    
T  24346683 cggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttgggtctaacacaaccccacaaaaccggctt 24346782  T
Q  428 gtgaggtga 436  Q
    |||||||||    
T  24346783 gtgaggtga 24346791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 20225155 - 20225049
Alignment:
Q  352 caatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcattt 451  Q
    |||| ||| ||| ||| ||| ||||||| | ||||||||| || ||| ||||||||||||| ||||||| |  |||||||||||| |||| |||||||||    
T  20225155 caatggatcttgaagaggctatgatatcattttagaaatcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattgtcctcattt 20225056  T
Q  452 ataaaca 458  Q
    |||||||    
T  20225055 ataaaca 20225049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 419
Target Start/End: Complemental strand, 43117788 - 43117694
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaa 419  Q
    ||||||||||||||||||||||||  ||||||||| ||||| | |||||||||   ||||||||||| |  |||| |||||||||||| ||||||    
T  43117788 atagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatcttagaaatcgttgttgggcctaacacaaccccacaaa 43117694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 462
Target Start/End: Original strand, 24487632 - 24487725
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||| | | ||||||||| || |||| | |||||||||| ||||||||| ||||||||||||| ||||| || || |||||||||||||    
T  24487632 gctctgataccatattagaaatcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggattacccccacttataaacatatt 24487725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 8081100 - 8081172
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||| ||||||||| ||| ||||    
T  8081100 gctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggatt 8081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 24270052 - 24270159
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  ||||| ||| |||||| || |||||||| | ||||| ||||| || |||| | |||||||||| ||||||||| ||||    
T  24270052 cggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttggtc-taacacaaccccacaaaaccggctt 24270150  T
Q  428 gtgaggtga 436  Q
    |||||||||    
T  24270151 gtgaggtga 24270159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 95447 - 95526
Alignment:
Q  328 gcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaaca 407  Q
    |||||||||||||||||||||  ||||| ||| ||||||| ||||||||| | ||||||||||| || |||| |||||||    
T  95447 gcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 7607677 - 7607602
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| |||| |||||||||||  ||||||||| |||||||||||||||||| ||  || |||||||||    
T  7607677 ttagaaatcatggttgggcctaacacaactccacaaaaccggcttgtgaggtgaagattgtctccacttataaaca 7607602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 24531734 - 24531607
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    |||| |||||||||||||  ||||| |||  | |||| ||||||||| | ||||||||||| || |||| | |||||||||| ||||||| | |||||||    
T  24531734 gaaaactgatagcaggtggcccaatggatcatagagaggctctgataccatcttagaaatcgtggttgggcataacacaaccccacaaaatcggcttgtg 24531635  T
Q  431 aggtgaagattatcctcatttataaaca 458  Q
    |||||| ||||  || || |||||||||    
T  24531634 aggtgaggattgcccccacttataaaca 24531607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 27132994 - 27133069
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  ||||| |||||||||    
T  27132994 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaaca 27133069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 458
Target Start/End: Original strand, 17352611 - 17352744
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||||||||||||||||| |||   |||  ||| ||| ||| ||||||||| | ||||||||||  || |||||||||||| |||| | |||||       
T  17352611 aatagcggaaacctgatagcaagtggctcaag-gatcttgaagaggctctgataccatcttagaaatggtggttggacctaacataaccccgcaaaattg 17352709  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||||||| || || |||||||||    
T  17352710 gcttgtgaggtgaagattacccccacttataaaca 17352744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 41666756 - 41666833
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  41666756 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 41666833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 456
Target Start/End: Original strand, 20510818 - 20510949
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||| |||||||||||||||||   ||| | ||| ||||||| ||||||||| | ||||| ||||||||  ||||| ||| ||||||  | ||||||     
T  20510818 aatagcagaaacctgatagcaggtagcccagtggatcttggagacgctctgataccatcttaaaaatcatggctggacttaatacaacc-aaaaaaaccg 20510916  T
Q  424 gcttgtgaggtgaagattatcctcatttataaa 456  Q
     |||||||||||| |||||||| || |||||||    
T  20510917 acttgtgaggtgaggattatccccacttataaa 20510949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 25258093 - 25258153
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  25258093 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 25258153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 25321883 - 25321943
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  25321883 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 25321943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 458
Target Start/End: Original strand, 6919374 - 6919504
Alignment:
Q  327 agcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagct 426  Q
    ||||||||||||||||||| |||  |||| ||| ||| ||| ||| ||||| | ||||| ||||| || |||  |||||||||||| ||||||| | |||    
T  6919374 agcggaaacctgatagcagatgactcaatggatcttgaagaggctttgataccatcttaaaaatcgtggttgagcctaacacaacctcacaaaa-ctgct 6919472  T
Q  427 tgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  ||| ||| || |||||||||    
T  6919473 tgtgaggtgagaattgtccccacttataaaca 6919504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 436
Target Start/End: Original strand, 13700588 - 13700643
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||||||||||||| |||||| |||||||||| ||||||||| |||| ||||||||    
T  13700588 tcttagaaatcatgattggacataacacaacctcacaaaaccggcttttgaggtga 13700643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 441
Target Start/End: Complemental strand, 15480650 - 15480584
Alignment:
Q  375 atatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||| ||||||||||  || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  15480650 atatcatcttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 15480584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 18333479 - 18333541
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||| |||||||||||| ||||||||| ||||||||||||| ||||| || || |||||||||    
T  18333479 ttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaaca 18333541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 95265 - 95342
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| || || |||| |||||||||||| ||||||||| ||||||||| ||| |||| ||| || |||||||||    
T  95265 tcttagaattcttggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgtccccacttataaaca 95342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 7133956 - 7134048
Alignment:
Q  328 gcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaac 421  Q
    |||||||| |||||||||||||||   ||||| ||||||| ||||||||||| | ||||||||  || |||| |||| ||||||| ||||||||    
T  7133956 gcggaaacttgatagcaggtgatctggtagatcttggagaggctctgatatcatattagaaattgtggttgg-cctagcacaaccccacaaaac 7134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 24647778 - 24647721
Alignment:
Q  384 tagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||| || ||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  24647778 tagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggatt 24647721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 38731781 - 38731914
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| |||||||||||||||||    ||||  |||||| ||| ||| ||||| | ||||||||||  || |||  |||||||||||| ||||||| |      
T  38731781 atagcagaaacctgatagcaggtagctcaatgaattttgaagaggctatgatagcatcttagaaatggtggttgtgcctaacacaacctcacaaaatcga 38731880  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| |||| | |||| |||||||||    
T  38731881 cttgtgaggtgaggattgttctcacttataaaca 38731914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 8098414 - 8098342
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| | | ||||||||| || |||| | |||||||||| ||||||||| ||||||||||||| ||||    
T  8098414 gctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggatt 8098342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 21209922 - 21209997
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| | |||||||||| ||||||||| |||||||||||||  ||| ||| || |||||||||    
T  21209922 ttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgagaattgtccccacttataaaca 21209997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 12034776 - 12034698
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||| |  |||||||  ||||||||||||| ||||  || ||||||||||||    
T  12034776 ttcttagaaatcgtggttgggcctaacacaatcctacaaaactggcttgtgaggtgaggatttcccccatttataaaca 12034698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 17015893 - 17015959
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||| |||||||||||| ||||||| | |||||||||||||  |||  ||||| |||||||||||||    
T  17015893 ttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgccctcacttataaacatatt 17015959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 441
Target Start/End: Original strand, 26137294 - 26137404
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggag-aagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    |||||||||||||||||  |||| | || |||||| | ||||||||| |  |||||||||| || |||| ||||||| || | |||||||||| ||||||    
T  26137294 aaacctgatagcaggtggcccaacaaatcttggagtaggctctgataccaccttagaaatcgtggttgggcctaacataatcccacaaaaccaacttgtg 26137393  T
Q  431 aggtgaagatt 441  Q
    || ||| ||||    
T  26137394 agatgaggatt 26137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 28510177 - 28510099
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||| |||| ||| ||||  | ||| |||||||||    
T  28510177 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgagatgaggattgccttcacttataaaca 28510099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 38731602 - 38731656
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtg 435  Q
    |||||||||| ||| ||||||||||||||||| || |||| | ||||||||||||    
T  38731602 tcttagaaatgatggttggacctaacacaacctcataaaatcggcttgtgaggtg 38731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 20510641 - 20510722
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||| ||||||| |||||||||||  ||||||||  | || |||||||| ||||  || || |||||||||||||    
T  20510641 tcttagaaatcgtgtttgggcctaacacaactccacaaaactggtttttgaggtgaggattgcccccacttataaacatatt 20510722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 24346520 - 24346577
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||||| ||||||||||||| ||||| || || |||||||||    
T  24346520 cctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaaca 24346577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 32908895 - 32908992
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    ||||| ||||||||||||||| ||  ||||| ||| ||| ||| ||||| ||||| ||||||||||  || |||   ||||||||||| |||||||||    
T  32908895 atagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatcttagaaattgtggttgagtctaacacaaccccacaaaacc 32908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 170565 - 170605
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||| |||||||||||| ||||||||| |||||||||||||    
T  170565 ttgggcctaacacaacctcacaaaaccggcttgtgaggtga 170605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 1564554 - 1564606
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaac 421  Q
    ||||||||||| ||||||||||| || |||  |||||||||||| ||||||||    
T  1564554 gctctgatatcatcttagaaatcgtggttgagcctaacacaaccccacaaaac 1564606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 7369794 - 7369754
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||| |||||||||||| ||||||||| |||||||||||||    
T  7369794 ttgggcctaacacaaccccacaaaaccggcttgtgaggtga 7369754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 8081292 - 8081344
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    |||| ||| |||||||||||||||  ||||| ||| |||||||||||||||||    
T  8081292 ataggggatacctgatagcaggtggcccaatcgatcttggagaagctctgata 8081344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 8287884 - 8287832
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtg 435  Q
    ||||||||  || |||| |||||||||||| ||||||||| ||||||||||||    
T  8287884 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtg 8287832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 13296757 - 13296698
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||  ||||||||||||| ||||    
T  13296757 tcttagaaatcgtggttgggcctaacacaacc-cacaaaactggcttgtgaggtgaggatt 13296698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 29909708 - 29909780
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||| || | ||||||||  || |||| |||||||||||  ||||||||| ||||||||||||| ||||    
T  29909708 gctctgatgtcatattagaaatggtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggatt 29909780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 33337454 - 33337514
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || ||| ||||||||||||| ||||||||| | ||||||| ||| ||||    
T  33337454 tcttagaaatcgtggttgaacctaacacaaccccacaaaaccggtttgtgagatgaggatt 33337514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 24532364 - 24532497
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||| ||  ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||| |    
T  24532364 atagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccgg 24532463  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  24532464 cttgtgaggtgatgattgcccccacttataaaca 24532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 41790799 - 41790667
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||| ||| ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| |    
T  41790799 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc-cacaaaaccgg 41790701  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||| |||||||| |||| ||| || |||||||||    
T  41790700 cttatgaggtgaggattgtccccacttataaaca 41790667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 3157502 - 3157618
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||| ||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||| ||||  || |||  |||||||||||| ||||||||  |    
T  3157502 atagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaatggtggttgagcctaacacaaccccacaaaactgg 3157601  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  3157602 cttgtgaggtgaggatt 3157618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 11232372 - 11232505
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| ||||||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |    
T  11232372 atagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgg 11232471  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  11232472 cttgtaaggtgaggattgcccccacttataaaca 11232505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 20301402 - 20301293
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||| ||| ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||  |    
T  20301402 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaacggg 20301303  T
Q  425 cttgtgaggt 434  Q
    ||||||||||    
T  20301302 cttgtgaggt 20301293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 21088034 - 21087925
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||| ||| ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||  |    
T  21088034 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaacggg 21087935  T
Q  425 cttgtgaggt 434  Q
    ||||||||||    
T  21087934 cttgtgaggt 21087925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 8084269 - 8084152
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||| ||||||||||||| |||  ||||| ||| ||||||| ||||||||| | ||||||||||| || ||||  ||||||||||  | ||||||||    
T  8084269 aatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggtctaacacaactccgcaaaacca 8084170  T
Q  424 gcttgtgaggtgaagatt 441  Q
    ||||||||||||| ||||    
T  8084169 gcttgtgaggtgaggatt 8084152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 39052872 - 39053005
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||||||| |  | ||| ||| ||||||| ||||| ||| | ||||||||||| |  |||| |||||||||||| ||||||||| |    
T  39052872 atagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccatcttagaaatcgttgttgggcctaacacaaccccacaaaaccgg 39052971  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  39052972 cttgtgaggtgaggattgcccccacttataaaca 39053005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 420
Target Start/End: Complemental strand, 10615535 - 10615440
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaa 420  Q
    ||||||||||||||||| |||||| | |||| ||| ||||||| ||||||||| | |||||||||| ||| || |||||||||||||| |||||||    
T  10615535 atagcggaaacctgatatcaggtggtacaatggatcttggagaggctctgataccatcttagaaattatggtttgacctaacacaaccccacaaaa 10615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 10614889 - 10615015
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    |||| |||| ||||||| |||||| ||| ||||||| ||| ||||||| ||||| ||||| || |||  ||||| |||||| ||||||| | ||||||||    
T  10614889 aaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatcttataaatcgtggttgagcctaatacaaccccacaaaatcggcttgtga 10614988  T
Q  432 ggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || ||||| ||||||    
T  10614989 ggtgaagattacccccatttgtaaaca 10615015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 31197755 - 31197623
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| | ||||| ||||||||| | ||||||||||| || |||| ||||||||||||  ||||||||      
T  31197755 atagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatcttagaaatc-tggttgggcctaacacaaccctacaaaaccga 31197657  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||| ||||||||  |||| ||| | |||||||||    
T  31197656 cttttgaggtgagaattacccttacttataaaca 31197623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 5932131 - 5932238
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    ||||||| |||||| ||||| |||||| ||| ||||||| ||||||||| | ||||| ||||  || |||| |||||||||||| ||||||||  |||||    
T  5932131 cggaaacgtgatagtaggtggtccaatggatcttggagaggctctgataccatcttaaaaatggtggttgggcctaacacaaccccacaaaacaggcttg 5932230  T
Q  429 tgaggtga 436  Q
    ||||||||    
T  5932231 tgaggtga 5932238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 12688207 - 12688080
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    ||||||||||||||||||  ||||| ||| ||| ||| ||||| ||||| ||||||||||| ||||||   |||||| |||  ||||||||| |||||||    
T  12688207 gaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaatcgtgtttgagtctaacataactccacaaaaccggcttgtg 12688108  T
Q  431 aggtgaagattatcctcatttataaaca 458  Q
    |||||  ||||  ||||| |||||||||    
T  12688107 aggtggggattgccctcacttataaaca 12688080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 458
Target Start/End: Original strand, 37868525 - 37868659
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||||||||| ||||||| ||||  ||||| ||| ||||||| ||| ||||| | ||||| ||||| || || | ||||||||||   ||||||||||    
T  37868525 aatagcggaaacttgatagcgggtggcccaatggatcttggagaggctatgataccatcttaaaaatcgtggttaggcctaacacaattccacaaaacca 37868624  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| ||||  || |||| |||||||    
T  37868625 gcttgtgaggtgaggattgcccccattaataaaca 37868659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 11232163 - 11232270
Alignment:
Q  351 ccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatt 450  Q
    ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |||||| |||||| ||||  || || |    
T  11232163 ccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccact 11232262  T
Q  451 tataaaca 458  Q
    ||||||||    
T  11232263 tataaaca 11232270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 8466666 - 8466800
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggag-aagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    ||||||||||||||||||||||||  ||||| ||| ||| |  ||||| ||||| | ||||||||||  || ||||  |  |||||||| || |||||||    
T  8466666 atagcggaaacctgatagcaggtggcccaatggatcttgaaccaagctttgataccatcttagaaattgtggttgggtcgtacacaaccccataaaacca 8466765  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| |||| ||| || |||||||||    
T  8466766 gcttgtgaggtgaggattgtccccacttataaaca 8466800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 4828165 - 4828076
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||| ||| || |||| |||||||||||| ||||||||| ||||||||||||| |||| ||| || |||||||||    
T  4828165 gctctgataccatattagagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaaca 4828076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 19256807 - 19256896
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  19256807 gctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaaca 19256896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 37001370 - 37001251
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaag---ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaac 421  Q
    ||||||||||||||| ||||||||  ||||| ||| |||  ||||   |||||||| | |||| |||||| || |||| |||||||||||  ||||||||    
T  37001370 atagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggttgggcctaacacaactccacaaaac 37001271  T
Q  422 cagcttgtgaggtgaagatt 441  Q
    | ||||||||||||| ||||    
T  37001270 cggcttgtgaggtgaggatt 37001251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 37001549 - 37001472
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| |||||||| |||| |||| ||| || |||||||||    
T  37001549 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgtgaggattgtccccacttataaaca 37001472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 10884161 - 10884090
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  10884161 gctctgataccatcttagaaatcgtggttgggcctaacacaacc-cacaaaaccggcttgtgaggtgaggatt 10884090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 12547183 - 12547123
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| |  |||| |||||||||||| ||||||||| ||||||||||||||||||    
T  12547183 tcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagatt 12547123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 39960277 - 39960217
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  39960277 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 39960217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 42846604 - 42846664
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  42846604 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 42846664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 19256587 - 19256662
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 19256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 24075307 - 24075382
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  24075307 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 24075382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 35682779 - 35682857
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| ||||||||| ||||| ||||||| ||||  || || |||||||||    
T  35682779 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaaca 35682857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 11598922 - 11598849
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaa 456  Q
    |||||||||||| || || | ||||||  | ||||||||| ||||||||||||| |||||||||||| ||||||    
T  11598922 ttagaaatcatggttagatccaacacattctcacaaaaccggcttgtgaggtgaggattatcctcatctataaa 11598849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 12688392 - 12688339
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggt 434  Q
    |||||||||||||| ||||||||| ||||||| ||||||||  |||||||||||    
T  12688392 tcttagaaatcatggttggacctatcacaaccccacaaaactggcttgtgaggt 12688339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 17469915 - 17469826
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || |||  |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  17469915 gctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 17469826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 18939296 - 18939373
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||  || |||| |||||||||||| ||||||| ||||||||||||||| ||||  || || |||||||||    
T  18939296 tcttagaaatggtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaaca 18939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 20094738 - 20094874
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||| ||||||||||| |||||  ||||| ||| ||| |||| |||||||| |  |||| ||||| || |||| ||||| |||||| ||||||||| |    
T  20094738 atagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgataccaacttataaatcgtggttgggcctaa-acaaccccacaaaaccgg 20094836  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||| |||||| ||||  || ||  ||||||||||||    
T  20094837 cttgtaaggtgaggattgcccccacatataaacatatt 20094874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 27205050 - 27204989
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||| |||||||| ||||    
T  27205050 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggatt 27204989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 27205148 - 27205087
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||| |||||||| ||||    
T  27205148 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggatt 27205087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 12317142 - 12317054
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| | ||||||||||| || |||| |||||||||| | ||||||| |||||| |||||||| ||||  || || |||||||||    
T  12317142 ctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaaca 12317054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 15042827 - 15042926
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttg--gagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    ||||||||||||||||||||||||  |||||  || |||  |||| ||| ||||| | ||||||||||| || || | |||||||||||| |||||||||    
T  15042827 atagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaatcgtggttaggcctaacacaaccccacaaaacc 15042926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 18004272 - 18004324
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||| |||||||||    
T  18004272 atagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgata 18004324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 27205245 - 27205185
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||| |||| |||||||| ||||    
T  27205245 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggatt 27205185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 436
Target Start/End: Complemental strand, 8084447 - 8084392
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||| || ||||||||||||||||| ||||||||  | |||||||||||    
T  8084447 tcttagaaatcgtggttggacctaacacaacctcacaaaactggtttgtgaggtga 8084392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 17477148 - 17477073
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||  |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  17477148 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 17477073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 34653233 - 34653159
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| |||||||| || | ||||| ||||| |||||||||    
T  34653233 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgttaggatta-cctcacttataaaca 34653159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 4828363 - 4828301
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  4828363 ttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 4828301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 433
Target Start/End: Complemental strand, 8849319 - 8849213
Alignment:
Q  327 agcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagct 426  Q
    |||||||| ||||||| |||||   ||||| ||||||  ||  || ||||||| ||||||||||| |  |||||| |||||||||  ||||||| |||||    
T  8849319 agcggaaaactgatagtaggtggctcaataaattttgatgagactttgatatcatcttagaaatcgtagttggacgtaacacaacaacacaaaatcagct 8849220  T
Q  427 tgtgagg 433  Q
    |||||||    
T  8849219 tgtgagg 8849213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 39743612 - 39743554
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || |||| |||||||||||| ||||||| | ||||||||||||| ||||    
T  39743612 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggatt 39743554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 4963437 - 4963384
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||  || |||| |||||||||||| ||||||||| |||||||||||||    
T  4963437 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 4963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 8929101 - 8929048
Alignment:
Q  382 cttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtg 435  Q
    ||||||| || || |||| |||||||||||| ||||||||| ||||||||||||    
T  8929101 cttagaattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtg 8929048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 18004095 - 18004176
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||| || |||| |||||||||||| |||||||||  ||| || ||||| ||||  || || |||||||||||||    
T  18004095 tcttagaaatcttggttgggcctaacacaacctcacaaaaccgacttatggggtgaggattgcccccacttataaacatatt 18004176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 22638177 - 22638238
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| || |||| | |||||||||| ||||||||| ||||||| ||||| ||||    
T  22638177 ttcttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggatt 22638238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 38447446 - 38447503
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  38447446 cctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 38447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 3157326 - 3157385
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||  || |||| |||||||||||| ||||||| ||||||||||||||| ||||    
T  3157326 tcttagaaatggtggttgggcctaacacaaccccacaaaa-cagcttgtgaggtgaggatt 3157385  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 26208198 - 26208326
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtg 430  Q
    |||||||||||||||||  ||||  ||| || |||||| |||||||| | ||||||||||  ||  |||||||||||||||| || |||||  |||| ||    
T  26208198 aaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggacctaacacaaccccataaaactggcttatg 26208297  T
Q  431 aggtgaagattatcctcatttataaacat 459  Q
    | ||| |||||  || || ||||||||||    
T  26208298 atgtggagattgcccccacttataaacat 26208326  T

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Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 20327792 - 20327925
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| |||||| |||| || |||||| | | |||||||||||| |||| |||||||||||| ||||||||| |    
T  20327792 atagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccatattagaaatcatggttgggcctaacacaaccccacaaaaccgg 20327891  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  20327892 cttgtgaggtgaggattgcccccacttataaaca 20327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 458
Target Start/End: Complemental strand, 54568032 - 54567900
Alignment:
Q  326 tagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagc 425  Q
    |||||||||||||||||||||||   |||| ||| ||||||| ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||    
T  54568032 tagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggc 54567933  T
Q  426 ttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| ||||  || || |||||||||    
T  54567932 ttgtgaggtgaggatttcccccacttataaaca 54567900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 4155465 - 4155332
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  |||||  || |||||||  |||||||| | ||||||||||| || |||| |||||||||||| ||||||||| |    
T  4155465 atagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgg 4155366  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||| |||||||| ||||  || || |||||||||    
T  4155365 cttttgaggtgaggattgcccccacttataaaca 4155332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 35038371 - 35038504
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||| |||||||  ||||| ||| ||||||| || |||||| | |||||||| || || |||| |||||||||||| |||||||||||    
T  35038371 atagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaaccag 35038470  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  35038471 cttgtcaggtgaggattgcccccacttataaaca 35038504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 432
Target Start/End: Original strand, 20303328 - 20303435
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||| |||||||||||||||||||  ||||| |||||| |||| ||||||||| | | ||||||||  || ||||||||||||||||| ||||||||| |    
T  20303328 atagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaattgtggttggacctaacacaaccccacaaaaccgg 20303427  T
Q  425 cttgtgag 432  Q
    ||||||||    
T  20303428 cttgtgag 20303435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 45828160 - 45828044
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||| |||||||||   |||| ||| ||||||| ||||||||| | ||||||||||  || | || |||||||||||| ||||||||| |    
T  45828160 atagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagggcctaacacaacctcacaaaaccgg 45828061  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  45828060 cttgtgaggtgaggatt 45828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 1723063 - 1723152
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  1723063 gctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 1723152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 436
Target Start/End: Complemental strand, 16239729 - 16239621
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    ||||||||||||||||||||  | ||  ||| |||||| || |||||||| | ||||||||||| || |||| |||||||||| | ||||||||| ||||    
T  16239729 cggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaaccggctt 16239630  T
Q  428 gtgaggtga 436  Q
    |||||||||    
T  16239629 gtgaggtga 16239621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 458
Target Start/End: Original strand, 16926901 - 16927025
Alignment:
Q  334 acctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgagg 433  Q
    |||||||| ||||||| ||||| ||| ||| |||  |||||||| | ||||||||||| || |||  | |||||||||| ||||||||| |||||||||     
T  16926901 acctgataacaggtgacccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaacacaaccccacaaaaccggcttgtgaga 16927000  T
Q  434 tgaagattatcctcatttataaaca 458  Q
    ||| ||||| || || |||||||||    
T  16927001 tgaggattacccccacttataaaca 16927025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 26272267 - 26272383
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||| ||||||||| ||||| ||  ||||| ||| ||| ||| ||| ||||||| ||||||||||  || ||||  ||||||||||| ||||||| |||    
T  26272267 atagcagaaacctgaaagcagatggcccaatggatattgaagatgctttgatatcatcttagaaattgtggttgggtctaacacaaccccacaaaatcag 26272366  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  26272367 cttgtgaggtgacgatt 26272383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 33640188 - 33640076
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    |||| ||||||  ||||| |||||| |||||  |||||||||| || |||||||||| ||||||||||  || |||| |||||||||| | |||||||||    
T  33640188 aataacggaaatatgataacaggtggtccaacggattttggaggaggctctgatatcatcttagaaattgtgattgggcctaacacaatcccacaaaacc 33640089  T
Q  423 agcttgtgaggtg 435  Q
     ||||||||||||    
T  33640088 ggcttgtgaggtg 33640076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 458
Target Start/End: Complemental strand, 45828330 - 45828254
Alignment:
Q  382 cttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| |||| |||||||||||| ||||||||| |||||||||||| |||||  || || |||||||||    
T  45828330 cttagaaatcatggttgggcctaacacaaccccacaaaacctgcttgtgaggtggagattgcccccacttataaaca 45828254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 458
Target Start/End: Complemental strand, 11589927 - 11589793
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||| ||||||||||||| ||||||  ||||   ||  || ||| ||||||||| | | ||||||||| || |||| |||||||||||| |||||||||     
T  11589927 aataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccg 11589828  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||| ||||  || || |||||||||    
T  11589827 gcttgtgaggtgaggattgcccccacttataaaca 11589793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 35038192 - 35038270
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  35038192 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 35038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 8142595 - 8142687
Alignment:
Q  330 ggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    ||||| |||||||||| ||| | ||| ||||||  ||| ||||||||| | ||||||||||| || || |||||||||||||| |||||||||    
T  8142595 ggaaatctgatagcagatgacctaatggattttaaagaggctctgataccatcttagaaatcgtggttagacctaacacaaccccacaaaacc 8142687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 17638319 - 17638259
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| | ||||||||||||||||||||| ||||    
T  17638319 tcttagaaatcgtggttgggcctaacacaacccctcaaaaccagcttgtgaggtgaggatt 17638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 24866282 - 24866222
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  24866282 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 24866222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 458
Target Start/End: Original strand, 29215791 - 29215890
Alignment:
Q  358 attttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaac 457  Q
    |||||| ||||||||| ||||| |||||||||||||| || ||||||||||  || ||||||||  || |||||||||| |||||||  || ||||||||    
T  29215791 attttgaagaagctctaatatcatcttagaaatcatggttagacctaacac-gccccacaaaactggcatgtgaggtgaggattatcaccacttataaac 29215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 460
Target Start/End: Complemental strand, 35018620 - 35018481
Alignment:
Q  321 tctaatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaa 420  Q
    ||||||||||||||||| |||||| |||| ||||  ||| ||||| | ||||||||||| |||||||| |  || |||| |||||| | |||  |||||     
T  35018620 tctaatagcggaaaccttatagcaagtgacccaacggatcttggataggctctgatatcatcttagaatttgtggttgggcctaactcgaccttacaaac 35018521  T
Q  421 ccagcttgtgaggtgaagattatcctcatttataaacata 460  Q
    ||||||||| |||||| |||   || || |||||||||||    
T  35018520 ccagcttgtaaggtgaggatggcccccacttataaacata 35018481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 54368631 - 54368524
Alignment:
Q  351 ccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatt 450  Q
    ||||| ||| ||| ||| ||||||||| | ||||||||||| || ||||  ||||||||||| || |||||| ||||||||||||| ||||  || || |    
T  54368631 ccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccact 54368532  T
Q  451 tataaaca 458  Q
    ||||||||    
T  54368531 tataaaca 54368524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 31317552 - 31317474
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| | ||||| | ||||||||||||| |||| ||| || |||||||||    
T  31317552 ttcttagaaatcgtggttgggcctaacacaaccccgcaaaatcggcttgtgaggtgatgattttccccacttataaaca 31317474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 50083079 - 50083157
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaa-ccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||||| |||| |||||||||| || ||||||||| ||||||||||||| ||||  || || |||||||||    
T  50083079 tcttagaaatcatggttgggcctaacacaacccccacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 50083157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 436
Target Start/End: Complemental strand, 16239914 - 16239857
Alignment:
Q  379 cttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    ||||||||||||  || ||||||||||||||||| |||||||||  ||||||||||||    
T  16239914 cttcttagaaattgtgcttggacctaacacaaccccacaaaaccgacttgtgaggtga 16239857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 7697417 - 7697457
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  7697417 cctaacacaaccccacaaaaccagcttgtgaggtgatgatt 7697457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 8019053 - 8018993
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||  || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  8019053 tcttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 8018993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 13574686 - 13574738
Alignment:
Q  384 tagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtga 436  Q
    |||||||| || |||| |||||||||||| ||||||||| |||||||||||||    
T  13574686 tagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtga 13574738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 45138958 - 45139030
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| | ||||||||||| || ||||  || |||||||| ||||||||| ||||||||||||| ||||    
T  45138958 gctctgataccatcttagaaatcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggatt 45139030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 4155645 - 4155567
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| ||||||||||||  | |||||| |||| |||||||| |||| ||| || |||||||||    
T  4155645 ttcttagaaatcgtggttgggcctaacacaaccctaaaaaaccggcttttgaggtgaggattgtccccacttataaaca 4155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 436
Target Start/End: Original strand, 12930076 - 12930182
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgt 429  Q
    ||||||||||||||||||  ||||  |||  ||||| || || ||||| | ||||||||||  || |||| |||||||||||| ||||||||| ||||||    
T  12930076 gaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgt 12930175  T
Q  430 gaggtga 436  Q
    || ||||    
T  12930176 gaagtga 12930182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 20327619 - 20327673
Alignment:
Q  387 aaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||    
T  20327619 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 20327673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 22729195 - 22729125
Alignment:
Q  371 tctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |||||||| |||| ||||    
T  22729195 tctgataccatcttagaaattgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggatt 22729125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 23708238 - 23708300
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||| | ||||||||| ||||||||||||| ||||  || || |||||||||    
T  23708238 ttggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 23708300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 23726694 - 23726756
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||| | ||||||||| ||||||||||||| ||||  || || |||||||||    
T  23726694 ttggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 23726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 23745150 - 23745212
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||| | ||||||||| ||||||||||||| ||||  || || |||||||||    
T  23745150 ttggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 23745212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 24063675 - 24063737
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||| | ||||||||| ||||||||||||| ||||  || || |||||||||    
T  24063675 ttggacctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 24063737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 455
Target Start/End: Complemental strand, 27086675 - 27086601
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataa 455  Q
    |||||||||||||| |||| |||||||||||  |||||||||| ||||| || ||| |||| | |||| ||||||    
T  27086675 tcttagaaatcatggttgggcctaacacaactccacaaaaccaacttgtaagatgaggattgtactcacttataa 27086601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 34221811 - 34221765
Alignment:
Q  415 acaaaaccagcttgtgaggtgaagattatcctcatttataaacatat 461  Q
    |||||||| ||||||||||||||||||  || |||||||||||||||    
T  34221811 acaaaacctgcttgtgaggtgaagatttcccccatttataaacatat 34221765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 429
Target Start/End: Original strand, 47702410 - 47702456
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgt 429  Q
    ||||||||| || |||| |||||||||||| ||||||||||||||||    
T  47702410 ttagaaatcgtggttgggcctaacacaaccccacaaaaccagcttgt 47702456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 50052540 - 50052598
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||| || |||| |||||||||||| ||||||||| |||||||| |||| ||||    
T  50052540 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggatt 50052598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 9273260 - 9273203
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| |||||||||||||||||| |||| ||||  || || |||||||||    
T  9273260 cctaacacaaccccacaaaaccagcttgtgaagtgaggattgcccccacttataaaca 9273203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 464
Target Start/End: Original strand, 29575844 - 29575972
Alignment:
Q  335 cctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggt 434  Q
    ||||||||||  ||| ||||||| ||||| ||| ||||||||| | ||||| ||||  || ||||| ||||||||||| ||  |||||  ||||||| ||    
T  29575844 cctgatagcatatgacccaatag-ttttgaagaggctctgataccatcttaaaaattgtggttggatctaacacaacctcagcaaaccgacttgtgatgt 29575942  T
Q  435 gaagattatcctcatttataaacatattct 464  Q
    ||  ||| |||||| ||||||||| |||||    
T  29575943 gataattgtcctcacttataaacacattct 29575972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 8142407 - 8142466
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| |||| ||||||| ||||||||| ||||||||||||| ||||    
T  8142407 tcttagaaatcgtgattgggccta-cacaacctcacaaaaccggcttgtgaggtgaggatt 8142466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 17001409 - 17001497
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| | | |||||||||||| ||||||||||||| ||| ||||||| |  ||| |||||||| ||||  || || |||||||||    
T  17001409 ctctgataccattttagaaatcatggttggacctaacactaccccacaaaatcgccttatgaggtgatgattgcccccacttataaaca 17001497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 31317313 - 31317253
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||  |||||||||| | ||||||||| ||||||||||||| ||||    
T  31317313 tcttagaaatcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggatt 31317253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 436
Target Start/End: Complemental strand, 16419408 - 16419297
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||| ||||||||| | ||||||||||| || |||| ||||| |||||| ||||||||| |    
T  16419408 atagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaatacaaccccacaaaaccgg 16419309  T
Q  425 cttgtgaggtga 436  Q
    ||||||||||||    
T  16419308 cttgtgaggtga 16419297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 2029910 - 2029794
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||| ||||||||||  ||||| ||| ||||||| ||||||||| | ||||||||||| || |||| ||||| |||||| ||||||||| |    
T  2029910 atagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaaacaaccccacaaaaccgg 2029811  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  2029810 cttgtgaggtgaggatt 2029794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 40379387 - 40379520
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||| |||||||||||||||||||  | ||| ||| ||||| | ||||||||| | ||||||||||| || |||| |||||||||||| ||||||||| |    
T  40379387 atagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgg 40379486  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  40379487 cttgtgaggtgaggattgcccccacttataaaca 40379520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 15124733 - 15124859
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    ||||||||||||||||| |||||| ||| |||||||  |||||||| | ||||||||||| || ||||  ||||||||||| |||||||||   ||||||    
T  15124733 aaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaaccgaattgtga 15124832  T
Q  432 ggtgaagattatcctcatttataaaca 458  Q
     |||||||||  ||||| |||||||||    
T  15124833 agtgaagattgccctcacttataaaca 15124859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 467
Target Start/End: Original strand, 33606232 - 33606374
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||||||||||||||||||| |||| ||||||||| ||| |||  || ||||||| ||||||||||| || |||  ||||||| |||  ||||||||  |    
T  33606232 atagcggaaacctgatagcaagtgacccaatagatcttgaagagactttgatatcatcttagaaatcgtggttgtgcctaacataacgccacaaaactgg 33606331  T
Q  425 cttgtgaggtgaagattatcctcatttataaacatattcttcg 467  Q
    |||||||||||| ||||| || || ||||||||| ||| ||||    
T  33606332 cttgtgaggtgaggattacccccacttataaacacatttttcg 33606374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 5509176 - 5509087
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||||| || || |||||||||    
T  5509176 gctctgataccatattagaaatcatggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattacccccacttataaaca 5509087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 14466353 - 14466469
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| || |||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |    
T  14466353 atagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgg 14466452  T
Q  425 cttgtgaggtgaagatt 441  Q
    ||||| |||||| ||||    
T  14466453 cttgtaaggtgaggatt 14466469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 458
Target Start/End: Original strand, 13250199 - 13250333
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacca 423  Q
    |||||| ||||||| |||  |||||| ||||| ||| ||||| ||||||| ||||| ||||||||||| | ||||||||||||||| || ||||||||||    
T  13250199 aatagcagaaaccttataaaaggtgacccaatggatcttggaaaagctctaatatcatcttagaaatcgtatttggacctaacacatcctcacaaaacca 13250298  T
Q  424 gcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||   ||| |||| |||| ||  ||||||||||||    
T  13250299 gcacatgatgtgaggattgtctgcatttataaaca 13250333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 29718443 - 29718336
Alignment:
Q  351 ccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatt 450  Q
    ||||| |||||| |||| ||||||||| |  |||||||||| || || | |||||||||||| ||||||||| ||||||||||||| ||||  ||||| |    
T  29718443 ccaatggattttagagaggctctgataccaacttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcact 29718344  T
Q  451 tataaaca 458  Q
    ||||||||    
T  29718343 tataaaca 29718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 40149004 - 40149079
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||||||||||||||| ||||||| | ||||||||||||| |||| ||| || |||||||||    
T  40149004 ttagaaatcatggttggacctaacacaaccccacaaaatcggcttgtgaggtgaggattgtccccacttataaaca 40149079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 93301 - 93394
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    |||||| |||||||||||||  ||||| ||| ||||||| ||||||||| | ||||| ||||| || |||| |||||||||||| |||||||||    
T  93301 cggaaagctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggttgggcctaacacaaccccacaaaacc 93394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 93574 - 93667
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    |||||||||||||| |||||| ||||| ||| ||||| | | ||||||| | ||||||||||| || |||| |||||||||||| |||||||||    
T  93574 cggaaacctgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaacc 93667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 42639634 - 42639690
Alignment:
Q  402 ctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||    
T  42639634 ctaacacaaccccacaaaaccagcttgtgaggtgacgattgtccccatttataaaca 42639690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 19191611 - 19191686
Alignment:
Q  383 ttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| |||| ||| || |||||||||    
T  19191611 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaaca 19191686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 5711621 - 5711751
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagctt 427  Q
    |||||||||||||||||||| |||||  ||| |||||| || ||||||||   ||||||||||  || |||| |||||||||||| ||||||||| ||||    
T  5711621 cggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatactatcttagaaatggtggttgggcctaacacaaccccacaaaaccggctt 5711720  T
Q  428 gtgaggtgaagattatcctcatttataaaca 458  Q
     | |||||| ||||  || || |||||||||    
T  5711721 ttaaggtgatgattgcccccacttataaaca 5711751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 16419587 - 16419510
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  16419587 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 16419510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 17719541 - 17719408
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    |||| |||||||||||||||||||  | ||| ||| |||||||  || ||||| | ||||||||||  || |||| || |||||||||  |||||||| |    
T  17719541 ataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattgtggttgggccgaacacaacccgacaaaaccgg 17719442  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||  || || |||||||||    
T  17719441 cttgtgaggtgaggattgcccccacttataaaca 17719408  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 28407780 - 28407869
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | ||||||||||| || |||| |||||||||||  ||||||||| ||||||||||||| ||||  || || |||||||||    
T  28407780 gctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 28407869  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 30006574 - 30006655
Alignment:
Q  377 atcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||| || |||| ||  |||||||| ||||||||| ||||||| ||||| |||||||| || |||||||||    
T  30006574 atcttcttagaaatcgtggttgggccgtacacaacctcacaaaaccggcttgtgtggtgatgattatccccacttataaaca 30006655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 30063262 - 30063343
Alignment:
Q  377 atcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||||||| || |||| ||  |||||||| ||||||||| ||||||| ||||| |||||||| || |||||||||    
T  30063262 atcttcttagaaatcgtggttgggccatacacaacctcacaaaaccggcttgtgtggtgatgattatccccacttataaaca 30063343  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 40379208 - 40379285
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  40379208 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 40379285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 5851680 - 5851756
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaacc-gcacaaaaccagcttgtgaggtgaagattatcctcatttataaa 456  Q
    |||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||| |||| ||| || |||||||    
T  5851680 tcttagaaatgatggttggacctaacacaacctccacaaaaccggcttgtgaggtgaggattgtccccacttataaa 5851756  T

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Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 17854917 - 17855005
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| | ||||||||| || ||||  ||| ||||||| ||||||||| ||||||||||||| ||||  ||||| |||||||||    
T  17854917 ctctgatatcatattagaaatcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaaca 17855005  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 435
Target Start/End: Original strand, 21383611 - 21383723
Alignment:
Q  324 aatagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaacc 422  Q
    |||||| ||||| ||||||||||||  |||| |||| |||||| || |||||||| | ||||||||||| || |||| |||||| ||| | |||||||||    
T  21383611 aatagcagaaacttgatagcaggtggcccaacagatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaactcaatcccacaaaacc 21383710  T
Q  423 agcttgtgaggtg 435  Q
     | ||||||||||    
T  21383711 ggtttgtgaggtg 21383723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 25082536 - 25082596
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || ||||||||||||||||| ||||||||  ||||||||||||| ||||    
T  25082536 tcttagaaatcgtggttggacctaacacaaccccacaaaactggcttgtgaggtgatgatt 25082596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 10571066 - 10570995
Alignment:
Q  370 ctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||| | ||||||||||| || |||  |||||||||||| ||||||||| |||||| |||||||||||    
T  10571066 ctctgataccatcttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaagatt 10570995  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 5711437 - 5711515
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| || |||| |||||||||||| ||||||||| |||||| |||||| ||||  || || |||||||||    
T  5711437 ttcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaaca 5711515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 2324337 - 2324248
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||| ||||| || |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  2324337 gctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 2324248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 9927996 - 9927919
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| || || |||||| |||||||||| || |||| ||||||||||||||| ||||| || || |||||||||    
T  9927996 tcttagaattcgtggttggacgtaacacaaccccaaaaaatcagcttgtgaggtgaggattacccccacttataaaca 9927919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 441
Target Start/End: Complemental strand, 24395997 - 24395888
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    |||| ||| |||||||| |||||| ||| ||| ||| ||||||||| | ||||||||||| || || | |||||||||||| ||||||| |   ||||||    
T  24395997 aaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcgtggtttggcctaacacaaccccacaaaatcgatttgtga 24395898  T
Q  432 ggtgaagatt 441  Q
    ||||| ||||    
T  24395897 ggtgaggatt 24395888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 40149179 - 40149264
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaa 410  Q
    ||||| |||| |||||||||||||| ||||| ||| ||| ||| ||||||||| | ||||||||||  || |||| ||||||||||    
T  40149179 atagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgataccatcttagaaattgtggttgggcctaacacaa 40149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 2030089 - 2030029
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    ||||||||||| || |||| ||||| |||||| ||||||||| ||||||||||||| ||||    
T  2030089 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggatt 2030029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 435
Target Start/End: Original strand, 31700743 - 31700798
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtg 435  Q
    |||||||||||| || |||| |||||||||| | ||||||||| ||||||||||||    
T  31700743 ttcttagaaatcgtggttgggcctaacacaaacccacaaaaccggcttgtgaggtg 31700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 32884177 - 32884115
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||| |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  32884177 ttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 32884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 2324539 - 2324482
Alignment:
Q  401 cctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  2324539 cctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 2324482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 17719651 - 17719598
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggt 434  Q
    ||||||||||| || |||| |||||||||||| ||||||||| | |||||||||    
T  17719651 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggt 17719598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 36352106 - 36352235
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    ||||||||||||| ||||||  || || ||| ||| |||  |||| ||| | ||||| ||||  || ||| ||||||||||||| ||||||||| ||||     
T  36352106 cggaaacctgataacaggtggcccgatggatcttgaagagactctaataccatcttaaaaattgtggttgaacctaacacaaccccacaaaaccggcttt 36352205  T
Q  429 tgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||||  || || |||||||||    
T  36352206 tgaggtgatgattgcccccacttataaaca 36352235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 27036402 - 27036466
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgagg 433  Q
    ||||||||| | | |||||||||||| |||| ||||||||||||  |||||||| |||| |||||    
T  27036402 gctctgataccatattagaaatcatggttgggcctaacacaaccctacaaaaccggcttatgagg 27036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 37769963 - 37770019
Alignment:
Q  402 ctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| ||||||||| |||| |||||||||||||  || || |||||||||    
T  37769963 ctaacacaaccccacaaaaccggcttatgaggtgaagattgcccccacttataaaca 37770019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 462
Target Start/End: Complemental strand, 81978 - 81846
Alignment:
Q  330 ggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgt 429  Q
    |||||||||||| |||||  |||||| ||| ||||||| ||||||||| | ||||||||||| || |||| |||||||||||| |||||||||  |||||    
T  81978 ggaaacctgataacaggtagtccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgt 81879  T
Q  430 gaggtgaagattatcctcatttataaacatatt 462  Q
     ||||||| ||| ||| || |||||||||||||    
T  81878 aaggtgaaaattgtccccacttataaacatatt 81846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 5697 - 5830
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||   |||| ||| ||||||| ||||||||| | ||||||||||| || |||| |||||||||||| | ||||||| |    
T  5697 atagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccgcaaaaccgg 5796  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||| ||| ||||  || || |||||||||    
T  5797 cttgtgagatgaggattgcccccacttataaaca 5830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 5543 - 5620
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||| ||| |||| |||||||||||| | ||||||| |||||||| |||| ||||  || || |||||||||    
T  5543 tcttagaaattatggttgggcctaacacaaccccgcaaaaccggcttgtgaagtgaggattgcccccacttataaaca 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 2057 - 1924
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| ||||||  ||||| ||| ||||||| ||||||||| | ||||||||||  || |||| |||||||||||| ||||||||| |    
T  2057 atagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccgg 1958  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||| |||||| ||||  || || |||||||||    
T  1957 cttgtaaggtgaggattgcccccacttataaaca 1924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 2237 - 2159
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||  || |||| |||||||||||| ||||||||| |||||| |||||| ||||  || || |||||||||    
T  2237 ttcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaaca 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 14444 - 14311
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||| ||  ||  ||||| ||| ||||||| ||||||||| | ||||||||| | || |||| |||||||||||| ||||||||| |    
T  14444 atagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggttgggcctaacacaaccccacaaaaccgg 14345  T
Q  425 cttgtgaggtgaagattatcctcatttataaaca 458  Q
    |||||||||||| |||| ||| || |||||||||    
T  14344 cttgtgaggtgatgattgtccccacttataaaca 14311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 5792 - 5663
Alignment:
Q  329 cggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttg 428  Q
    ||||||||||||||||||||  ||||| ||||||| ||| ||||||||| | ||||||||||| || ||||  ||||||||||| ||||||||| |||||    
T  5792 cggaaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttg 5693  T
Q  429 tgaggtgaagattatcctcatttataaaca 458  Q
    | || ||| ||||| || || |||||||||    
T  5692 taagatgaggattacccccacttataaaca 5663  T

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Target: scaffold0092; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 5976 - 5894
Alignment:
Q  380 ttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    |||||||||||| |  |||||||||||||||||  |||||| | |||||  |||||| |||| |||||| |||||||||||||    
T  5976 ttcttagaaatcgtagttggacctaacacaacctaacaaaatcggcttgaaaggtgaggattgtcctcacttataaacatatt 5894  T

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Target: scaffold0481 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 458
Target Start/End: Original strand, 3458 - 3547
Alignment:
Q  369 gctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||| | | ||||||||| || ||||  ||||||||||| ||||||||| |||||||||||||||||| ||| || |||||||||    
T  3458 gctctgataccatattagaaatcgtgattgggtctaacacaaccccacaaaaccggcttgtgaggtgaagattgtccccacttataaaca 3547  T

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Target: scaffold0400 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 3986 - 3870
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||| | ||| ||||||| | ||||||| | | ||||||||  || |||  |||||||||||| ||||||||  |    
T  3986 atagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaacacaaccccacaaaactgg 3887  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  3886 cttgtgaggtgaggatt 3870  T

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Target: scaffold0365 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 4630 - 4514
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccag 424  Q
    ||||||||||||||||||||||||  ||| | ||| ||||||| | ||||||| | | ||||||||  || |||  |||||||||||| ||||||||  |    
T  4630 atagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaacacaaccccacaaaactgg 4531  T
Q  425 cttgtgaggtgaagatt 441  Q
    |||||||||||| ||||    
T  4530 cttgtgaggtgaggatt 4514  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 441
Target Start/End: Original strand, 288656 - 288716
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagatt 441  Q
    |||||||||||||| |||| |||||||||||  ||||||||||||||||||||||| ||||    
T  288656 tcttagaaatcatggttgggcctaacacaactccacaaaaccagcttgtgaggtgaggatt 288716  T

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Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 56593 - 56467
Alignment:
Q  332 aaacctgatagcaggtgatccaatagattttggagaagctctgatatcttcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtga 431  Q
    |||||||||| ||||||  ||||   ||| || ||| ||||||||| | | ||||||||| || |||| |||||||||||| ||||||||| ||||||||    
T  56593 aaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 56494  T
Q  432 ggtgaagattatcctcatttataaaca 458  Q
    ||||| ||||  || || |||||||||    
T  56493 ggtgatgattgcccacagttataaaca 56467  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 102320 - 102385
Alignment:
Q  325 atagcggaaacctgatagcaggtgatccaatagattttggagaag-ctctgatatcttcttagaaat 390  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  102320 atagtggaaacctgatagcaggtg-tccaatagattttggagaagactctgatatcatcttaaaaat 102385  T

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Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 21024 - 20949
Alignment:
Q  381 tcttagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaa 456  Q
    ||||||||||| || |||| | |||||||||| ||||||||| ||||||||||||| ||||| | ||| |||||||    
T  21024 tcttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattaccttcacttataaa 20949  T

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Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 4431 - 4505
Alignment:
Q  384 tagaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||||||| |||  |||||||||||| ||||||||| ||||||||||||| ||||  || || |||||||||    
T  4431 tagaaatcatggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 4505  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 89567 - 89633
Alignment:
Q  396 ttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaacatatt 462  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| ||| ||| || |||||||||||||    
T  89567 ttggacctaacacaacctcacaaaaccgacttgtaaggtgaatattgtccccacttataaacatatt 89633  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 51408 - 51362
Alignment:
Q  331 gaaacctgatagcaggtgatccaatagattttggagaagctctgata 377  Q
    |||||||||||||||| || ||||| ||| |||||||||||||||||    
T  51408 gaaacctgatagcaggagacccaatggatcttggagaagctctgata 51362  T

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Target: scaffold0766 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 6355 - 6282
Alignment:
Q  385 agaaatcatgtttggacctaacacaaccgcacaaaaccagcttgtgaggtgaagattatcctcatttataaaca 458  Q
    ||||||| || |||| |||||||||||| ||||||| | ||||||||||||| ||||  || || |||||||||    
T  6355 agaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaaca 6282  T

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