View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17793_low_115 (Length: 216)

Name: NF17793_low_115
Description: NF17793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17793_low_115
NF17793_low_115
[»] chr7 (35 HSPs)
chr7 (1-148)||(19889349-19889496)
chr7 (1-148)||(9331970-9332117)
chr7 (1-148)||(5909304-5909451)
chr7 (1-148)||(3561900-3562047)
chr7 (1-148)||(12085953-12086100)
chr7 (1-136)||(47120228-47120363)
chr7 (1-148)||(39757132-39757279)
chr7 (1-148)||(36548482-36548629)
chr7 (29-148)||(384452-384571)
chr7 (1-148)||(7170011-7170158)
chr7 (40-148)||(18102252-18102361)
chr7 (1-161)||(39869131-39869289)
chr7 (1-148)||(23982777-23982925)
chr7 (1-96)||(24250322-24250417)
chr7 (81-148)||(41331478-41331545)
chr7 (61-146)||(8170590-8170675)
chr7 (1-148)||(47457483-47457631)
chr7 (1-148)||(4969781-4969929)
chr7 (1-108)||(19868122-19868230)
chr7 (1-148)||(25709421-25709569)
chr7 (1-148)||(45501467-45501615)
chr7 (13-146)||(8091336-8091470)
chr7 (1-98)||(42750297-42750394)
chr7 (96-145)||(24250602-24250651)
chr7 (1-148)||(33342997-33343144)
chr7 (34-108)||(7899548-7899623)
chr7 (3-97)||(24699146-24699240)
chr7 (1-148)||(32117823-32117970)
chr7 (3-77)||(12650831-12650905)
chr7 (1-42)||(34270274-34270315)
chr7 (1-49)||(4161890-4161938)
chr7 (1-148)||(7040274-7040421)
chr7 (1-148)||(46290019-46290166)
chr7 (84-148)||(29398156-29398220)
chr7 (64-139)||(47707915-47707991)
[»] chr3 (40 HSPs)
chr3 (1-148)||(11610923-11611070)
chr3 (1-148)||(3863338-3863485)
chr3 (1-148)||(20938065-20938213)
chr3 (1-153)||(50364199-50364351)
chr3 (1-148)||(13495302-13495450)
chr3 (1-146)||(32553375-32553520)
chr3 (1-132)||(54621256-54621387)
chr3 (20-148)||(16875047-16875175)
chr3 (40-148)||(29686368-29686476)
chr3 (1-148)||(38389455-38389603)
chr3 (1-105)||(51339249-51339353)
chr3 (1-148)||(37055388-37055536)
chr3 (4-139)||(46492374-46492510)
chr3 (3-146)||(36426433-36426579)
chr3 (18-148)||(40497073-40497203)
chr3 (93-146)||(41151734-41151787)
chr3 (40-148)||(24978694-24978802)
chr3 (1-148)||(42180060-42180208)
chr3 (1-148)||(51618058-51618203)
chr3 (81-148)||(23523035-23523102)
chr3 (40-148)||(23803068-23803177)
chr3 (9-58)||(35094972-35095021)
chr3 (4-77)||(46845534-46845607)
chr3 (1-148)||(2571277-2571424)
chr3 (1-148)||(12515496-12515643)
chr3 (1-57)||(37444155-37444211)
chr3 (1-148)||(50204411-50204559)
chr3 (1-148)||(54527728-54527876)
chr3 (106-148)||(11611090-11611132)
chr3 (2-77)||(2379166-2379238)
chr3 (1-74)||(15863002-15863075)
chr3 (10-98)||(53794781-53794870)
chr3 (1-148)||(10307775-10307922)
chr3 (1-77)||(30214104-30214179)
chr3 (40-148)||(38786346-38786453)
chr3 (1-77)||(28992871-28992949)
chr3 (1-47)||(39365255-39365301)
chr3 (1-58)||(47386930-47386987)
chr3 (1-148)||(23638071-23638219)
chr3 (84-148)||(51401532-51401596)
[»] chr2 (32 HSPs)
chr2 (5-148)||(16123291-16123434)
chr2 (1-148)||(27665066-27665213)
chr2 (1-148)||(19228434-19228581)
chr2 (1-148)||(12016675-12016822)
chr2 (1-148)||(22705463-22705610)
chr2 (1-145)||(14377433-14377577)
chr2 (1-148)||(16126581-16126728)
chr2 (1-144)||(39904074-39904217)
chr2 (1-148)||(16919176-16919323)
chr2 (4-148)||(13351233-13351378)
chr2 (40-148)||(4821324-4821432)
chr2 (1-148)||(15411644-15411792)
chr2 (1-139)||(26229885-26230022)
chr2 (40-148)||(8770908-8771016)
chr2 (1-146)||(9747325-9747471)
chr2 (1-146)||(20566041-20566187)
chr2 (1-125)||(10690791-10690915)
chr2 (1-139)||(23932573-23932712)
chr2 (42-146)||(2060066-2060171)
chr2 (23-148)||(24729599-24729725)
chr2 (7-148)||(40562099-40562241)
chr2 (4-77)||(43388860-43388933)
chr2 (1-148)||(5583580-5583727)
chr2 (1-77)||(25998096-25998172)
chr2 (1-58)||(4579901-4579958)
chr2 (1-148)||(43806368-43806516)
chr2 (66-148)||(15231904-15231987)
chr2 (1-36)||(29795066-29795101)
chr2 (81-148)||(37471762-37471829)
chr2 (1-74)||(7720123-7720196)
chr2 (83-148)||(41492155-41492220)
chr2 (1-33)||(25970075-25970107)
[»] chr1 (41 HSPs)
chr1 (1-138)||(32716195-32716332)
chr1 (1-148)||(39150349-39150496)
chr1 (1-148)||(17919462-17919609)
chr1 (1-148)||(313758-313905)
chr1 (1-146)||(44918033-44918178)
chr1 (26-148)||(39930823-39930945)
chr1 (1-148)||(8062213-8062360)
chr1 (42-148)||(6570007-6570113)
chr1 (40-146)||(30288888-30288994)
chr1 (1-148)||(6754480-6754627)
chr1 (1-148)||(41624838-41624985)
chr1 (39-148)||(52833494-52833603)
chr1 (1-110)||(23591706-23591816)
chr1 (1-148)||(30171887-30172035)
chr1 (1-148)||(30187428-30187576)
chr1 (9-148)||(36490795-36490935)
chr1 (1-71)||(51382380-51382450)
chr1 (1-148)||(6180194-6180342)
chr1 (4-98)||(7520069-7520164)
chr1 (1-148)||(21854139-21854286)
chr1 (1-148)||(34801976-34802123)
chr1 (85-148)||(10896446-10896509)
chr1 (14-148)||(30363017-30363152)
chr1 (3-148)||(22167345-22167491)
chr1 (4-77)||(40799352-40799425)
chr1 (1-148)||(1502742-1502889)
chr1 (1-148)||(6307511-6307658)
chr1 (88-148)||(44007552-44007612)
chr1 (1-98)||(39627643-39627741)
chr1 (1-148)||(13321884-13322032)
chr1 (81-148)||(3096298-3096365)
chr1 (38-108)||(9516626-9516697)
chr1 (3-77)||(11744922-11744996)
chr1 (4-58)||(47355490-47355544)
chr1 (84-145)||(21391924-21391985)
chr1 (1-74)||(22331631-22331704)
chr1 (4-49)||(25465170-25465215)
chr1 (1-54)||(38539095-38539148)
chr1 (1-54)||(38561313-38561366)
chr1 (1-46)||(43317498-43317543)
chr1 (46-98)||(43671743-43671795)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-148)||(52801-52948)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-148)||(145686-145833)
[»] chr5 (29 HSPs)
chr5 (1-148)||(2795532-2795679)
chr5 (1-148)||(9184216-9184363)
chr5 (5-145)||(11375972-11376113)
chr5 (1-148)||(15190881-15191029)
chr5 (1-145)||(31365975-31366121)
chr5 (9-148)||(4047429-4047568)
chr5 (1-148)||(30328349-30328496)
chr5 (1-148)||(11636740-11636887)
chr5 (4-148)||(28629890-28630034)
chr5 (1-148)||(12642015-12642162)
chr5 (1-148)||(34578020-34578167)
chr5 (53-148)||(41350263-41350358)
chr5 (1-148)||(8103602-8103749)
chr5 (1-97)||(5958196-5958293)
chr5 (1-148)||(10664987-10665134)
chr5 (1-148)||(3398228-3398376)
chr5 (66-145)||(14466519-14466598)
chr5 (1-148)||(24329657-24329804)
chr5 (64-153)||(18150485-18150575)
chr5 (1-148)||(30839790-30839937)
chr5 (1-148)||(36597588-36597735)
chr5 (30-148)||(16174644-16174762)
chr5 (1-98)||(10658362-10658457)
chr5 (1-57)||(40512960-40513016)
chr5 (1-36)||(11250091-11250126)
chr5 (1-148)||(32020006-32020154)
chr5 (3-36)||(28378720-28378753)
chr5 (7-92)||(29538742-29538827)
chr5 (1-148)||(18841727-18841875)
[»] chr8 (46 HSPs)
chr8 (1-148)||(1203610-1203757)
chr8 (1-148)||(13327963-13328110)
chr8 (1-148)||(10129112-10129259)
chr8 (1-148)||(7140481-7140628)
chr8 (2-148)||(19343858-19344005)
chr8 (1-148)||(39701825-39701972)
chr8 (1-148)||(40210843-40210990)
chr8 (2-148)||(9801678-9801824)
chr8 (1-148)||(35678297-35678444)
chr8 (1-144)||(9743870-9744013)
chr8 (1-143)||(38527829-38527975)
chr8 (41-148)||(18567438-18567545)
chr8 (1-148)||(14816148-14816295)
chr8 (1-148)||(14829445-14829592)
chr8 (1-148)||(4080416-4080563)
chr8 (1-148)||(26682076-26682224)
chr8 (1-148)||(4084565-4084712)
chr8 (1-148)||(4102872-4103019)
chr8 (1-148)||(12131991-12132139)
chr8 (1-148)||(31812121-31812269)
chr8 (81-148)||(45519584-45519651)
chr8 (18-148)||(8140593-8140723)
chr8 (1-145)||(8284593-8284739)
chr8 (5-100)||(39703466-39703561)
chr8 (1-145)||(6818025-6818170)
chr8 (1-77)||(13496825-13496902)
chr8 (1-148)||(20514640-20514789)
chr8 (1-78)||(35745981-35746058)
chr8 (80-148)||(35740951-35741019)
chr8 (81-148)||(39024879-39024946)
chr8 (1-57)||(3306168-3306224)
chr8 (1-148)||(38843712-38843860)
chr8 (1-139)||(26834569-26834708)
chr8 (1-98)||(10974626-10974724)
chr8 (1-58)||(7750676-7750733)
chr8 (1-57)||(2161396-2161452)
chr8 (88-148)||(31451420-31451480)
chr8 (13-77)||(37264521-37264585)
chr8 (1-148)||(45005978-45006125)
chr8 (20-100)||(45516316-45516395)
chr8 (1-36)||(11117132-11117167)
chr8 (1-36)||(26364124-26364159)
chr8 (79-148)||(14961685-14961754)
chr8 (64-148)||(28014880-28014965)
chr8 (1-58)||(33514613-33514670)
chr8 (1-123)||(34249685-34249809)
[»] chr6 (40 HSPs)
chr6 (1-138)||(5362925-5363062)
chr6 (12-139)||(22974604-22974731)
chr6 (12-139)||(23813670-23813797)
chr6 (14-146)||(31069606-31069738)
chr6 (1-148)||(2830703-2830850)
chr6 (1-148)||(10887037-10887185)
chr6 (1-146)||(1017802-1017948)
chr6 (1-148)||(29863324-29863472)
chr6 (18-95)||(3850577-3850654)
chr6 (1-148)||(31568121-31568265)
chr6 (1-148)||(6016864-6017012)
chr6 (1-148)||(8977488-8977636)
chr6 (1-148)||(34692362-34692510)
chr6 (1-146)||(18332712-18332858)
chr6 (5-148)||(31169785-31169929)
chr6 (81-145)||(17596430-17596494)
chr6 (1-139)||(30623334-30623473)
chr6 (1-95)||(31790991-31791086)
chr6 (1-90)||(32615540-32615632)
chr6 (1-148)||(14228148-14228295)
chr6 (1-77)||(26602524-26602600)
chr6 (1-148)||(28943791-28943938)
chr6 (1-148)||(33017733-33017880)
chr6 (9-100)||(34300379-34300470)
chr6 (1-36)||(1814916-1814951)
chr6 (1-36)||(10345674-10345709)
chr6 (1-36)||(17552721-17552756)
chr6 (8-148)||(29065447-29065589)
chr6 (8-148)||(29120300-29120442)
chr6 (4-34)||(34243314-34243344)
chr6 (8-57)||(2086949-2086998)
chr6 (8-94)||(29061057-29061145)
chr6 (8-94)||(29074514-29074602)
chr6 (8-94)||(29079278-29079366)
chr6 (8-94)||(29107087-29107175)
chr6 (14-146)||(30591187-30591320)
chr6 (1-49)||(17596321-17596369)
chr6 (112-144)||(26602478-26602510)
chr6 (1-77)||(31039712-31039788)
chr6 (84-148)||(31503834-31503898)
[»] chr4 (45 HSPs)
chr4 (1-145)||(7349697-7349841)
chr4 (4-148)||(29190838-29190982)
chr4 (20-148)||(53961350-53961478)
chr4 (1-148)||(10389290-10389437)
chr4 (30-148)||(41415579-41415697)
chr4 (1-148)||(35999969-36000109)
chr4 (28-148)||(48910824-48910944)
chr4 (64-148)||(23051404-23051488)
chr4 (1-148)||(23553578-23553726)
chr4 (1-93)||(49228365-49228457)
chr4 (5-100)||(49650223-49650318)
chr4 (1-148)||(34941286-34941434)
chr4 (7-148)||(10813516-10813658)
chr4 (1-148)||(16667406-16667554)
chr4 (4-148)||(52391309-52391454)
chr4 (1-148)||(19450922-19451070)
chr4 (1-77)||(49332341-49332417)
chr4 (1-148)||(54495659-54495807)
chr4 (26-148)||(4329628-4329750)
chr4 (4-148)||(49181083-49181228)
chr4 (4-148)||(51691353-51691497)
chr4 (1-148)||(2096879-2097027)
chr4 (1-148)||(8736833-8736980)
chr4 (1-148)||(17409832-17409980)
chr4 (1-148)||(19468202-19468350)
chr4 (5-148)||(47326914-47327058)
chr4 (5-148)||(47341710-47341854)
chr4 (1-148)||(50352311-50352458)
chr4 (8-148)||(27362406-27362547)
chr4 (1-49)||(40049567-40049615)
chr4 (5-139)||(27756574-27756708)
chr4 (1-58)||(9326982-9327039)
chr4 (1-58)||(9373704-9373761)
chr4 (1-58)||(9382016-9382073)
chr4 (1-57)||(9759255-9759311)
chr4 (1-148)||(23545484-23545632)
chr4 (92-148)||(49228754-49228810)
chr4 (1-36)||(36968296-36968331)
chr4 (6-57)||(39876844-39876895)
chr4 (13-110)||(13009815-13009913)
chr4 (64-148)||(24684908-24684993)
chr4 (1-108)||(6875509-6875617)
chr4 (1-57)||(10658557-10658613)
chr4 (1-57)||(10872702-10872758)
chr4 (5-148)||(27019272-27019416)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-148)||(13094-13241)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-148)||(3435-3572)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-148)||(5699-5847)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-148)||(37136-37284)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-108)||(43479-43578)
[»] scaffold0018 (1 HSPs)
scaffold0018 (40-145)||(182091-182195)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-77)||(94112-94188)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-148)||(16557-16704)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-33)||(22459-22491)


Alignment Details
Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19889349 - 19889496
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  19889349 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 19889448  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  19889449 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 19889496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9331970 - 9332117
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  9331970 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaa 9332069  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | ||||||| |||||| ||||||||||||| ||||||||    
T  9332070 cacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgca 9332117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 5909451 - 5909304
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||  || |||||||||||||| | ||||||||||||||||||||    
T  5909451 aacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaa 5909352  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | ||||||| |||||||||||||||||||||||||||||    
T  5909351 cacaagtttcaagtcaaagttactactttaaacttcttatcatgtgca 5909304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3562047 - 3561900
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||    
T  3562047 aacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaagctacatatttaatataaaaaa 3561948  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||   ||| ||| |||||||||||||||||||| ||||||||    
T  3561947 cacaagttttaagttaaagttactactttaaacttcttaacatgtgca 3561900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12086100 - 12085953
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||| ||||||||||||||||| | ||||||| | ||||||||||| |||||||| || |||||||||||||| |||| |||||||||||||||||    
T  12086100 aacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaaatatttaatataaaaaa 12086001  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | |||||||||||||  |||||||||||||| |||||||    
T  12086000 cacaagtttcaagtcaaaattacttatttaaacttcttattatgtgca 12085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 47120363 - 47120228
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||  ||||||||| | ||||| |||||||||||||  || ||||||| |||||||||||||||||||||||||||||    
T  47120363 aacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 47120264  T
Q  101 tacaagttcctagtcaaaattactactttaaacttc 136  Q
     ||||||||| ||||||| |||||| ||||||||||    
T  47120263 cacaagttccaagtcaaagttactaatttaaacttc 47120228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39757279 - 39757132
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||| || ||||||| |||||| | ||||||||||||||||||||    
T  39757279 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaa 39757180  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| || | ||| ||| |||||| ||||||||||||| ||||||||    
T  39757179 cacaaatttcaagttaaagttactattttaaacttcttaacatgtgca 39757132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 36548629 - 36548482
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | ||||| |||| ||||||||  || ||||||| ||||||| |||||||||||||||||||||    
T  36548629 aacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaatattacatatttaatataaaaaa 36548530  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||| ||   ||||||| |||||| ||||||||||||| ||||||||    
T  36548529 tacaaattttaagtcaaagttactaatttaaacttcttaacatgtgca 36548482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 384571 - 384452
Alignment:
Q  29 taactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactt 128  Q
    |||||||| | |||||||||||||||||||| || ||||||| |||||| | |||||||||||||||||||| ||||||||| ||| ||| |||||||||    
T  384571 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaaacaagttccaagttaaagttactactt 384472  T
Q  129 taaacttcttatcatgtgca 148  Q
    ||||||||||| ||||||||    
T  384471 taaacttcttaacatgtgca 384452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 7170011 - 7170158
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| | |||||||   |||||||||| |||||||   || ||||| ||||||||  | |||||| |||||||||||     
T  7170011 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaacc-aacaattaattattaaaaatctacataattaatataaaat 7170109  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  7170110 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 7170158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 18102361 - 18102252
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataa-aaaatacaagttcctagtcaaaattactactttaaacttctt 138  Q
    ||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||| ||| || ||||||||||||    
T  18102361 agtaatttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaacttctt 18102262  T
Q  139 atcatgtgca 148  Q
    | ||||||||    
T  18102261 aacatgtgca 18102252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 39869131 - 39869289
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgtt-acatatttaatataaaaa 99  Q
    ||||| |||||||||||||||||||||| |||||||   |||||||||||||||||||  || ||||| ||||||||  || ||||||||||||||||      
T  39869131 aacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaatg 39869230  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgcagaaaaatccttat 161  Q
      ||||||| | ||||||| ||||||||||| |||||||||||||||| |||||| ||||||    
T  39869231 c-acaagtttcaagtcaaa-ttactactttacacttcttatcatgtgc-gaaaaacccttat 39869289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23982925 - 23982777
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatg-ttacatatttaatataaaaa 99  Q
    |||||||||||||||  ||||||||| | ||||||| | |||||||||||||| ||||  || ||||| ||||||||   ||| |||||||||||||||     
T  23982925 aacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaat 23982826  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| ||||||| ||||||||||||| |||||| | ||||||    
T  23982825 acacaagttccaagtcaaagttactactttaaatttcttaacgtgtgca 23982777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24250322 - 24250417
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataa 96  Q
    |||||||||||||||||||||||||| | ||||||| | | |||||||||||||||||  || |||||||||||||| | ||||||||||||||||    
T  24250322 aacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataa 24250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 41331545 - 41331478
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||||||||   ||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  41331545 tacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgca 41331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 8170590 - 8170675
Alignment:
Q  61 aataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
    |||||||||| |||||| |||| ||||||||||||||||||| |||||   ||| ||| |||||||||||||||| ||| ||||||    
T  8170590 aataattattgattaaaagttatatatttaatataaaaaataaaagttttaagttaaagttactactttaaactttttaacatgtg 8170675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 47457631 - 47457483
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaa-cttttcattgaaaattaataattattta-ttaaatgttacatatttaatataaaa 98  Q
    |||||||||||||||||||||||||||  ||||||| | |||||  |||| |||||||| ||| ||||||||| ||||| | |||| || ||||||||||    
T  47457631 aacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-taacaattatttatttaaaagctacacatataatataaaa 47457533  T
Q  99 aatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
       | || |||| ||||||| ||||||||||||| || ||| ||||||||    
T  47457532 tgcataaattccaagtcaaagttactactttaaattttttaacatgtgca 47457483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 4969781 - 4969929
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | |||| |||||  ||| |||   ||||||||||||| ||| |||  ||||||||||| |||     
T  4969781 aacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 4969880  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  4969881 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 4969929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19868122 - 19868230
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttat-taaatgttacatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||   ||||||| | ||||| |||||||||||||  |  ||||||||||  ||| |||| |||||||||||||||     
T  19868122 aacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaat 19868221  T
Q  100 atacaagtt 108  Q
    | |||||||    
T  19868222 acacaagtt 19868230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25709569 - 25709421
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||||  ||||||| | ||||| |||| ||||| ||  || ||| ||||||| ||| | ||| |||||||||| |||     
T  25709569 aacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaat 25709470  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| |  |||| |||||| ||||||||||||| ||||||||    
T  25709469 gaacaagttccaatacaaagttactattttaaacttcttaacatgtgca 25709421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45501467 - 45501615
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||| |||||||  | ||||||||||  || ||||  || ||||||||||| ||  |||  ||||||||||| |||     
T  45501467 aacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagttttatatttaatattaaat 45501566  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  ||||||| ||| |||||||||||||  |||||||    
T  45501567 gtacaagttccaatacaaaatttctattttaaacttcttaagatgtgca 45501615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 8091470 - 8091336
Alignment:
Q  13 attgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaatacaagttcct 111  Q
    ||||||||||| |||| ||||||| | || || |||| ||||||||| |||||||||||||| ||| |||| |||||||| | ||||  || ||||| |     
T  8091470 attgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagttaca 8091371  T
Q  112 agtcaaaattactactttaaacttcttatcatgtg 146  Q
    |  |||| |||||| ||||||||||||| ||||||    
T  8091370 atgcaaagttactattttaaacttcttaacatgtg 8091336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42750297 - 42750394
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaa 98  Q
    |||||||||||||||||| ||||||||| |||||||   | |||||||| ||||||||  |||||||||||||| ||| ||||||  ||||||||||||    
T  42750297 aacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaa-caataattatttattaaaaagttacaattttaatataaaa 42750394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 24250602 - 24250651
Alignment:
Q  96 aaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  24250602 aaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgt 24250651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 33342997 - 33343144
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  33342997 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 33343095  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  33343096 gttcaagttccaatacaaagttactattttaaatttcttaacatgtgca 33343144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 7899623 - 7899548
Alignment:
Q  34 aaaggaagtaacttttcattgaaaattaataattatttattaaa-tgttacatatttaatataaaaaatacaagtt 108  Q
    ||||||||||| |||||||||||||  |  ||| |||||||||| ||||| ||||||||||||||| |||||||||    
T  7899623 aaaggaagtaatttttcattgaaaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagtt 7899548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 24699146 - 24699240
Alignment:
Q  3 catgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatta-aatgttacatatttaatataaa 97  Q
    |||| |||||||||||||||||||    ||||||  | ||||||||||||||||||  || |||||||||||| || |||||||||||||||||||    
T  24699146 catgagcaatattgcacatgttaagactactaaaata-gtaacttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 32117823 - 32117970
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | || |||||| ||||| |||  |  |||||||  | ||| ||||  ||||||||||| || |    
T  32117823 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatttaatatagaata 32117922  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||| | ||  ||| || | |||||||| |||||| ||||||||    
T  32117923 tacaagtttcaagataaacttgccactttaaatttcttaacatgtgca 32117970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 12650831 - 12650905
Alignment:
Q  3 catgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||||||| |||||||||   |||||||   ||||||||||||||||||| ||  ||||||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaa 12650905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34270274 - 34270315
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagt 42  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  34270274 aacatgtgcaatattgcacatgttaaggtaactaaaagaagt 34270315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4161890 - 4161938
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaactttt 49  Q
    |||||||| ||||||||||||||||||| ||||||| | ||||||||||    
T  4161890 aacatgtgtaatattgcacatgttaaaggaactaaaagtagtaactttt 4161938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7040421 - 7040274
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||| ||||| |||||| ||||||||||||||||| |  | |||| || |||| |||  || ||||||||||| |||  ||| ||| |||||| ||||     
T  7040421 aacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-ttaatagaaaat 7040323  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| | |||||  || |||||||||||||||| ||||||||    
T  7040322 acacaagttccaaatcaaacatagtactttaaacttcttaacatgtgca 7040274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 46290019 - 46290166
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  46290019 aacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 46290117  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  46290118 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 46290166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 29398220 - 29398156
Alignment:
Q  84 atatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||| |||  |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  29398220 atatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 29398156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 47707991 - 47707915
Alignment:
Q  64 aattatttattaaat-gttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    ||||||||||||||  |||| |||||||||| ||||  || ||||| | | |||||||||||| |||||||||||||    
T  47707991 aattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactattttaaacttctta 47707915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 5e-52; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 11610923 - 11611070
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  11610923 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 11611022  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  11611023 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 11611070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 3863338 - 3863485
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |  ||||||| |||||| | ||||||||||||||||||||    
T  3863338 aacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagctacatatttaatataaaaaa 3863437  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||  ||| |||||||||||||||||||| ||||||||    
T  3863438 cacaagttccaagctaaagttactactttaaacttcttaacatgtgca 3863485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 20938065 - 20938213
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatat-aaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | | |||||||| |||||||| ||| ||||||| ||||||  ||||||||||||||| |||||    
T  20938065 aacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaattacatatttaatataaaaaa 20938164  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  20938165 acacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 20938213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 50364199 - 50364351
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||| |||||||||||| || ||||||||| | |||||||| | ||||||||  || ||||||| |||||| ||||||||||||||||||||||    
T  50364199 aacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagttacatatttaatataaaaaa 50364298  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgcagaaaa 153  Q
     ||||||||| ||||||| |||||||||||||||||||| |||||||| ||||    
T  50364299 cacaagttccaagtcaaagttactactttaaacttcttagcatgtgcaaaaaa 50364351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13495302 - 13495450
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaa 99  Q
    |||||||||||  ||||||||||||| ||||||||| | ||||| |||| ||||||||| || ||||||||||||||    ||||||||||||||||||     
T  13495302 aacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaat 13495401  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13495402 gcacaagttccaagtcaaaattactactttaaacttcttatcatgtgca 13495450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32553375 - 32553520
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||| |||||||||| |||| |||| | |||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||    
T  32553375 aacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaatattacatatttaatataaaaaa 32553474  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
     ||||||| | | | ||| ||| || ||||||||||||| ||||||    
T  32553475 cacaagtttcaaattaaagttattaatttaaacttcttaacatgtg 32553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 54621387 - 54621256
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||| ||||||| |||| |||| | ||||| |||||||| ||||  || ||||||| |||||||||||||||||||||||||||||    
T  54621387 aacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 54621288  T
Q  101 tacaagttcctagtcaaaattactactttaaa 132  Q
     |||| |||| ||||||| |||||| ||||||    
T  54621287 cacaacttccaagtcaaagttactaatttaaa 54621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 16875175 - 16875047
Alignment:
Q  20 atgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaa 119  Q
    ||||||| ||||||||| | ||||| |||| ||||||||  || |||| || |||||| | |||||||||||||||||||| ||||||| | ||| |||     
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaag 16875076  T
Q  120 ttactactttaaacttcttatcatgtgca 148  Q
    |||||||||||||||||||| ||||||||    
T  16875075 ttactactttaaacttcttaacatgtgca 16875047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 29686368 - 29686476
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    |||||||||||| |||| || || |||||||||||||| | || |||| |||||||||||| ||||||||  ||| ||| ||||||||||||||||||||    
T  29686368 agtaacttttcactgaatatcaacaattatttattaaaagctatatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttctta 29686467  T
Q  140 tcatgtgca 148  Q
    |||||||||    
T  29686468 tcatgtgca 29686476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38389455 - 38389603
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||||||  | |||||||||||||| |||     
T  38389455 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 38389554  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  38389555 gcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgca 38389603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 51339353 - 51339249
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| |||||||||   ||||| |||||||||||||  || ||||||| |||||| | ||| ||||||||||||||||    
T  51339353 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaagctacgtatttaatataaaaaa 51339254  T
Q  101 tacaa 105  Q
     ||||    
T  51339253 cacaa 51339249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 37055536 - 37055388
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||| |||||||||| ||||||||| |||||||   ||||||||| |||||||||  || ||||||||||| ||| |||  ||| ||||||||||||    
T  37055536 aacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaaa 37055437  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| |  |||  |||||| |||||||||||||  |||||||    
T  37055436 acacaagttccgatacaactttactattttaaacttcttaatatgtgca 37055388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 46492510 - 46492374
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaa-atgttacatatttaatataaaaaata 102  Q
    ||||||||||||||||||||||||| ||||||| |  |||| |||| ||||||||  || |||||||||||||   |||| |||||||||| ||||  ||    
T  46492510 atgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaatacaaaatgta 46492411  T
Q  103 caagttcctagtcaaaattactactttaaacttctta 139  Q
    |||||| | |  |||| ||||||||||||| ||||||    
T  46492410 caagtttcaatgcaaagttactactttaaatttctta 46492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 36426579 - 36426433
Alignment:
Q  3 catgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttc--attgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||| ||||||||||||||| || ||||| | ||||| ||||   || |||||  || | ||||||||||||  | |||||||||||||| |||     
T  36426579 catgtgcaacattgcacatgttaaaatatctaaaagtagtaattttttttatcgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 36426480  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
      ||||||||| |||||||||||| ||||||||||||||| ||||||    
T  36426479 gcacaagttccaagtcaaaattaccactttaaacttcttaacatgtg 36426433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 40497073 - 40497203
Alignment:
Q  18 acatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaaatacaagttcctagtca 116  Q
    ||||||||| | ||||||| | |||||||||| ||||||| | || ||||| ||||||||  | |||||| |||||||||||   ||||||||  ||| |    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattgaaa-tcaacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagtta 40497171  T
Q  117 aaattactactttaaacttcttatcatgtgca 148  Q
    || |||||||||||||||||||||||||||||    
T  40497172 aagttactactttaaacttcttatcatgtgca 40497203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 41151734 - 41151787
Alignment:
Q  93 ataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  41151734 ataaaaaatacaagttccaagttcaaattactactttaaacttcttatcatgtg 41151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 24978694 - 24978802
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    |||||||||| ||||| ||  |||||||||| ||||||  ||||||||| ||| ||||||| ||||||| | ||||||  | |||||||||||||| |||    
T  24978694 agtaactttttattgagaaccaataattattgattaaaaattacatattaaatttaaaaaacacaagtttcaagtcaacgtaactactttaaacttgtta 24978793  T
Q  140 tcatgtgca 148  Q
     ||||||||    
T  24978794 acatgtgca 24978802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 42180060 - 42180208
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattta-ttaaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||   ||||||||||| ||||| |||  ||||||||||| |||     
T  42180060 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 42180159  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  |||||||  || ||||||||||||| ||||||||    
T  42180160 gtacaagttccaatacaaaatttttattttaaacttcttaacatgtgca 42180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 51618058 - 51618203
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||||  ||||||| | || || |||| | ||||||  || ||||||||||||||   || |||||||||| ||||      
T  51618058 aacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaa--atatatatttaatacaaaatg 51618155  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||||| |  |||| |||| | || |||||||||| ||||||||    
T  51618156 tacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgca 51618203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 23523035 - 23523102
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||||||||| |||   ||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  23523035 tacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgca 23523102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 23803177 - 23803068
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctt 138  Q
    ||||||||||  |||||||  || ||||||||||| ||| |||  ||||||||||| ||| ||||||||||| |  ||||||| ||| ||||||||||||    
T  23803177 agtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaacttctt 23803078  T
Q  139 atcatgtgca 148  Q
    | ||||||||    
T  23803077 aacatgtgca 23803068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 35094972 - 35095021
Alignment:
Q  9 caatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaa 35095021  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 46845607 - 46845534
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||||||||||| |||||| ||||||| | || || |||| ||||||||| || ||||||||||||||    
T  46845607 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaa 46845534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2571277 - 2571424
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  2571277 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 2571375  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  2571376 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 2571424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12515643 - 12515496
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| ||| ||||  || |||||||| |  ||| |||| |||||||||| ||||     
T  12515643 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatt-aaaaccaacaattatttaacaaaaagttatatatttaatacaaaat 12515545  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | ||||||||||  |||| |||||| |||||| || ||| ||||||||    
T  12515544 gttcaagttcctatgcaaagttactattttaaattttttaacatgtgca 12515496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37444155 - 37444211
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||| |||||||    
T  37444155 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaa 37444211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 50204411 - 50204559
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||| ||||  ||| ||| ||| |||||| |||| ||| |||  ||||||||||| |||     
T  50204411 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagttttatatttaatattaaat 50204510  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| ||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  50204511 gtacaggttccaatacaaaatttctattttaaacttcttaacatgtgca 50204559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 54527876 - 54527728
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||     
T  54527876 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 54527777  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  |||||||  || |||||| |||||| ||||||||    
T  54527776 gtacaagttccaatacaaaatttatattttaaatttcttaacatgtgca 54527728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 11611090 - 11611132
Alignment:
Q  106 gttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    
T  11611090 gttccaagtcaaagttactactttaaacttcttatcatgtgca 11611132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 2379238 - 2379166
Alignment:
Q  2 acatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    ||||||||||||||||||||||||||  ||||||| | ||||| |||| ||||||   ||| ||||||||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattgaa---taacaattatttattaaa 2379166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15863075 - 15863002
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt 74  Q
    ||||||||||||||||||||||||| || || |||| | || |||||| |||||||||  || |||||||||||    
T  15863075 aacatgtgcaatattgcacatgttacaggaattaaaagtagcaactttacattgaaaaagaacaattatttatt 15863002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 53794781 - 53794870
Alignment:
Q  10 aatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaa 98  Q
    ||||||||||||||||||  |||||||   | ||||| || |||||||| ||| ||| ||||||| ||| ||||||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttacatatttaatataaaa 53794870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10307775 - 10307922
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||| ||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  10307775 aacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 10307873  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  10307874 gttcaagttccaatgcaaatttactattttaaatttcttaacatgtgca 10307922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30214179 - 30214104
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    ||||||||||||||| |||||  ||| | |||||||  | ||||||||||||||||||| || ||||||||||||||    
T  30214179 aacatgtgcaatattacacattctaaggcaactaaaata-gtaacttttcattgaaaatcaacaattatttattaaa 30214104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 38786453 - 38786346
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    ||||| |||| ||||||||| || ||||||||||||||   |||| ||||| |||||||   |||| || | | |||||||||||| |||||||||||||    
T  38786453 agtaattttttattgaaaat-aacaattatttattaaaaaatacacatttagtataaaatccacaaatttcaaatcaaaattactattttaaacttctta 38786355  T
Q  140 tcatgtgca 148  Q
     ||||||||    
T  38786354 acatgtgca 38786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28992949 - 28992871
Alignment:
Q  1 aacatgtgcaatat--tgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    ||||||||||||||  |||||||||||||  || |||| | |||||||||||||| |||| || |||||||||| ||||    
T  28992949 aacatgtgcaatatattgcacatgttaaaacaattaaaagtagtaacttttcattaaaaaatattaattatttaataaa 28992871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39365301 - 39365255
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaactt 47  Q
    ||||||||||||||||||||||||||||  |||||| | ||||||||    
T  39365301 aacatgtgcaatattgcacatgttaaagctactaaaagtagtaactt 39365255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47386930 - 47386987
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    ||||||||||||||||| ||| |||||| ||||||| | ||||| |||| ||||||||    
T  47386930 aacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaa 47386987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23638219 - 23638071
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    ||||||||||||||||  ||||||||  ||||| || | |||||||||  ||||||||  |  |||||||| || ||| |||  |||||||||||||||     
T  23638219 aacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaagttgtatatttaatataaaat 23638120  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||| | || | || |||| | |||||| |||||| ||||||||    
T  23638119 acacaagtttcaagactaacttaccattttaaatttcttaacatgtgca 23638071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 51401532 - 51401596
Alignment:
Q  84 atatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||| |||  |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  51401532 atatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 51401596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 16123291 - 16123434
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaataca 104  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||  || |||| || ||||||||||||||||||||||||||||| |||    
T  16123291 tgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgattaaatgttacatatttaatataaaaaacaca 16123390  T
Q  105 agttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  16123391 agttcctaatcaaaattactaatttaaacttcttatcatgtgca 16123434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 27665213 - 27665066
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  27665213 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 27665114  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27665113 cacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 27665066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19228434 - 19228581
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||| |||||| ||||||||||||||| ||||||    
T  19228434 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 19228533  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  19228534 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgca 19228581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12016675 - 12016822
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||||  || ||||||| |||||| | ||||||||||||||||||||    
T  12016675 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 12016774  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  12016775 cacaagttccaagttaaaattactactttaaacttcttaatatgtgca 12016822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 22705463 - 22705610
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||| ||| || ||||||||||||||||||||||    
T  22705463 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaagttacatatttaatataaaaaa 22705562  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | ||| ||||||||||||||||||||||||  |||||||    
T  22705563 cacaagtttcaagttaaaattactactttaaacttcttaaaatgtgca 22705610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 14377433 - 14377577
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||| ||||||||||||||||||||| | ||||||| | |||||||||| ||||||||  || |||||||| ||||| ||||||||||||||||||||||    
T  14377433 aacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaa 14377532  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
     ||||||| | ||||||| ||||||||||||||||||||||||||    
T  14377533 cacaagtttcaagtcaaagttactactttaaacttcttatcatgt 14377577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16126728 - 16126581
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||  || ||||||| |||||| | ||||||||||||||||||||    
T  16126728 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 16126629  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | ||| ||| |||||||||||||||||||| ||||||||    
T  16126628 cacaagtttcaagttaaagttactactttaaacttcttaacatgtgca 16126581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39904217 - 39904074
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| || ||||||| |||||| | ||||| ||||||||||||||    
T  39904217 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatgtttaatataaaaaa 39904118  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatg 144  Q
     | ||||||| ||| ||| |||||||||||||||||||| ||||    
T  39904117 cataagttccaagttaaatttactactttaaacttcttaacatg 39904074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16919323 - 16919176
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||||  |||||||  || ||||||| |||||| ||||||||||||||||||||||    
T  16919323 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagttacatatttaatataaaaaa 16919224  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | ||||||| |||||||||||||||| |||  |||||||    
T  16919223 cacaagtttcaagtcaaagttactactttaaacttgttaatatgtgca 16919176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 13351378 - 13351233
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttc-attgaaaattaataattatttattaaatgttacatatttaatataaaaaata 102  Q
    ||||||||||||||||||||||| ||||||||| | ||| | ||||  ||||||||| || ||||||| |||||| |||||||||| ||||||||||| |    
T  13351378 atgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaattattaattaaaagttacatattaaatataaaaaaca 13351279  T
Q  103 caagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||  ||||||| |||||||||||||||||||| ||||||||    
T  13351278 caagttctaagtcaaagttactactttaaacttcttaacatgtgca 13351233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 4821324 - 4821432
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    |||||||||||||||||||  || |||||||||||||| | |||||||||||||||||||| ||||||| | | ||||| ||||||||||||||||||||    
T  4821324 agtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttctta 4821423  T
Q  140 tcatgtgca 148  Q
    |||||||||    
T  4821424 tcatgtgca 4821432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15411792 - 15411644
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||  || ||| ||||||| ||| | ||||||||||||||||||     
T  15411792 aacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaat 15411693  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||| | || |||| |||||| ||||||||||||| ||||||||    
T  15411692 gaacaagtttcaagacaaagttactattttaaacttcttaacatgtgca 15411644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26230022 - 26229885
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| |||| ||| ||||  || ||||||| |||||| ||||||||||||||||||||||    
T  26230022 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaagttacatatttaatataaaaaa 26229924  T
Q  101 tacaagttcctagtcaaaattactactttaaacttctta 139  Q
    || || ||   ||||||| |||||| |||||||||||||    
T  26229923 tataaattttaagtcaaagttactattttaaacttctta 26229885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 8771016 - 8770908
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    |||||||||||| | ||||  || |||||||||||||| |||||||||||||||||||||| | || || | ||||||||||||||||||||||||||||    
T  8771016 agtaacttttcaataaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaaaaatttcaagtcaaaattactactttaaacttctta 8770917  T
Q  140 tcatgtgca 148  Q
     ||||||||    
T  8770916 acatgtgca 8770908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9747325 - 9747471
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||||| | ||||||||||| |||||||| | ||||||| || ||||||||  || || ||||| | |||  | ||||||||||||||||||     
T  9747325 aacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaat 9747424  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
      ||||||||| || ||||||||||| ||||||||||||| ||||||    
T  9747425 gaacaagttccaagacaaaattactattttaaacttcttaacatgtg 9747471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20566187 - 20566041
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||||||||||||||||||||||||||||   || |||| || ||||||||  || ||||||||||| |||| |||  ||||||||| ||||     
T  20566187 aacatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatttaataaaaaat 20566088  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
    | ||||||||| |  ||||  || |||||||||||||||| ||||||    
T  20566087 acacaagttccaatacaaacataatactttaaacttcttaacatgtg 20566041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 10690791 - 10690915
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||  ||||||||   ||||| |||||||| ||||  || ||||||| |||||| | ||||||||||||||||||||    
T  10690791 aacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 10690890  T
Q  101 tacaagttcctagtcaaaattacta 125  Q
     | ||||| | | | ||||||||||    
T  10690891 cataagtttcaaattaaaattacta 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 23932573 - 23932712
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| |||||||   ||||||||| |||||||||  || ||||||||||| ||| |||  ||| |||||||||||     
T  23932573 aacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaat 23932672  T
Q  100 atacaagttcctagtcaaaattactactttaaacttctta 139  Q
      ||||||||| |  |||  |||||| |||||||||||||    
T  23932673 gcacaagttccgatacaattttactattttaaacttctta 23932712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 2060171 - 2060066
Alignment:
Q  42 taacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttat 140  Q
    |||||||||||| ||||| || ||||||||||||||  | |||||||||||||||||| | |||| |||| ||| ||| ||||||||||||| ||||||     
T  2060171 taacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactactttaaatttcttaa 2060072  T
Q  141 catgtg 146  Q
    ||||||    
T  2060071 catgtg 2060066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 24729725 - 24729599
Alignment:
Q  23 ttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaatacaagttcctagtcaaaatt 121  Q
    ||||||||||||||   ||||| |||| ||||||||| |||||||||||||| ||| ||||  || |||||| |||| |||||| |||| |  |||| ||    
T  24729725 ttaaagtaactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagtt 24729626  T
Q  122 actactttaaacttcttatcatgtgca 148  Q
    |||| |||||| |||||| ||||||||    
T  24729625 actattttaaatttcttaacatgtgca 24729599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 40562241 - 40562099
Alignment:
Q  7 tgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa-tgttacatatttaatataaaaaatacaa 105  Q
    |||||||||| |||||||||||||  |||| | ||||| |||| ||||||||| || ||||||||||||||  |||| ||||| |||| |||| ||| ||    
T  40562241 tgcaatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattatttattaaagagttatatattaaatacaaaatataaaa 40562142  T
Q  106 gttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||| | |  |||| ||| || ||||||||| ||| ||||||||    
T  40562141 gtttcaatgcaaagttaatattttaaactttttaacatgtgca 40562099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 43388933 - 43388860
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||||||||||| |||||| ||||||| | || || |||| ||||||||| || ||||||||||||||    
T  43388933 atgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaa 43388860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 5583727 - 5583580
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  5583727 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 5583629  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  5583628 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 5583580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25998172 - 25998096
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||| ||||||||||||||||||||||||| |    ||||||| ||||||||  || ||||||||||||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaa 25998096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4579958 - 4579901
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    ||||||||||||||| |||||||||| | |||||||   |||||||||||||||||||    
T  4579958 aacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaa 4579901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 43806368 - 43806516
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  || |||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||     
T  43806368 aacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 43806467  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||| | |  ||||||| ||| ||||||||| ||| ||||||||    
T  43806468 gtacaagtttcaatacaaaatttctattttaaactttttaacatgtgca 43806516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 15231904 - 15231987
Alignment:
Q  66 ttatttattaaat-gttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||  |||||||||||||||| |||   |||||||   ||||||| |||| ||||||||||||||| ||||||||    
T  15231904 ttatttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacatgtgca 15231987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 29795066 - 29795101
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29795066 aacatgtgcaatattgcacatattaaagtaactaaa 29795101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 37471829 - 37471762
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||||||||   ||||||| | || |||| |||||| ||||||||||||| ||||||||    
T  37471829 tacatatttaatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgca 37471762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7720123 - 7720196
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt 74  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  |||||||  || |||||||||||    
T  7720123 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttatt 7720196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 41492220 - 41492155
Alignment:
Q  83 catatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||| ||||   ||||||| | ||| ||| ||| |||||||||||||||||||||||||    
T  41492220 catatttaataaaaaatgcacaagtttcaagttaaagttattactttaaacttcttatcatgtgca 41492155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25970075 - 25970107
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaact 33  Q
    |||||||| ||||||||||||||||||||||||    
T  25970075 aacatgtgtaatattgcacatgttaaagtaact 25970107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 8e-51; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 32716332 - 32716195
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||  || ||||||| |||||||||||||||||||||||||||||    
T  32716332 aacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaatgttacatatttaatataaaaaa 32716233  T
Q  101 tacaagttcctagtcaaaattactactttaaacttctt 138  Q
     ||||||||||| |||||||||||||||||||||||||    
T  32716232 cacaagttcctaatcaaaattactactttaaacttctt 32716195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39150496 - 39150349
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  39150496 aacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 39150397  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| |||| ||||||| |||||||||||||||||||||||||||||    
T  39150396 cacaaattccaagtcaaagttactactttaaacttcttatcatgtgca 39150349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17919462 - 17919609
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||| ||||||||| | ||||||| | |||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  17919462 aacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 17919561  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| |||| ||||||| ||||||||||||||||||||| |||||||    
T  17919562 cacaaattccaagtcaaagttactactttaaacttcttattatgtgca 17919609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 313758 - 313905
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| |||| ||||||||  || ||||||| |||||| | ||||||||||||||||||||    
T  313758 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 313857  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||| ||| |||||||||||||||||||| ||||||||    
T  313858 cacaagttccaagttaaagttactactttaaacttcttaacatgtgca 313905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 44918033 - 44918178
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| |||| ||||||||| || ||||||| |||||| | ||||||||||||||||||||    
T  44918033 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaa 44918132  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
     | ||||||| | | ||| ||||||||||||| |||||| ||||||    
T  44918133 cataagttccaaattaaagttactactttaaatttcttaacatgtg 44918178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 39930945 - 39930823
Alignment:
Q  26 aagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattacta 125  Q
    ||||||||||| | ||||| |||||||||||||  |||||||||||||||||   ||||||| |||||||||||||||||||| | ||| ||| ||||||    
T  39930945 aagtaactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaactacatatataatataaaaaatacaagtttcaagttaaagttacta 39930846  T
Q  126 ctttaaacttcttatcatgtgca 148  Q
    |||||||||||||||||||||||    
T  39930845 ctttaaacttcttatcatgtgca 39930823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 8062213 - 8062360
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||| || ||||||| ||||||   || |||||||||||||||||    
T  8062213 aacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaactatatatttaatataaaaaa 8062312  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | || || | | | ||| |||||||||||||||| ||| ||||||||    
T  8062313 cataaatttcaaattaaagttactactttaaactttttaacatgtgca 8062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 6570113 - 6570007
Alignment:
Q  42 taacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatc 141  Q
    |||||||||||||||||  || ||||||| |||||| | |||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||| |    
T  6570113 taacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaac 6570014  T
Q  142 atgtgca 148  Q
    |||||||    
T  6570013 atgtgca 6570007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 30288994 - 30288888
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    ||||| |||||||||||||  || ||||||| |||||| | |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  30288994 agtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttctta 30288895  T
Q  140 tcatgtg 146  Q
     ||||||    
T  30288894 acatgtg 30288888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 6754480 - 6754627
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| | |||||||   |||||||||| |||||||   || ||||| ||||||||  | |||||| |||||||||||     
T  6754480 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaacc-aacaattaattattaaaaatctacataattaatataaaat 6754578  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6754579 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 6754627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 41624838 - 41624985
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| |||||||   |||||||||| |||||||   || ||||| ||||||||  | |||||| |||||||||||     
T  41624838 aacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaacc-aacaattaattattaaaaatctacataattaatataaaat 41624936  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  41624937 gcacaagttccaagtcaaagttactactttaaacttcttatcatatgca 41624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 52833603 - 52833494
Alignment:
Q  39 aagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctt 138  Q
    |||||| |||||||||||||  || |||||||||||||| | |||||||||| ||||||||  |||| || | |||||||||||||| ||||||||||||    
T  52833603 aagtaatttttcattgaaaacaaacaattatttattaaaagctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttctt 52833504  T
Q  139 atcatgtgca 148  Q
    ||||||||||    
T  52833503 atcatgtgca 52833494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23591706 - 23591816
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||| |||||||   ||||| |||| ||||||||| |||||||||||||| ||| |||| |||||||||| ||||     
T  23591706 aacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaat 23591805  T
Q  100 atacaagttcc 110  Q
     ||||||||||    
T  23591806 gtacaagttcc 23591816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 30171887 - 30172035
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||   | ||||| | ||||| |||| ||||||||  || | ||||||||||||  | |||||||||||||| |||     
T  30171887 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 30171986  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||| ||||||||||||||| ||||||||    
T  30171987 gcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgca 30172035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 30187428 - 30187576
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||   | ||||| | ||||| |||| ||||||||  || | ||||||||||||  | |||||||||||||| |||     
T  30187428 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 30187527  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||| ||||||||||||||| ||||||||    
T  30187528 gcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgca 30187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 36490795 - 36490935
Alignment:
Q  9 caatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaatacaagt 107  Q
    |||||||||||||||||||| || |||| | ||||| |||| ||||||||  || ||||||||||| ||| |||| ||||| |||| ||||  |||||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagt 36490894  T
Q  108 tcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||| |  |||| |||||| ||||||||||||| ||||||||    
T  36490895 tccaatgcaaagttactattttaaacttcttaacatgtgca 36490935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 51382380 - 51382450
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt 71  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||||    
T  51382380 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 6180194 - 6180342
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattta-ttaaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| ||| | ||||||||||| ||||| |||  ||||||||||| |||     
T  6180194 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagttttatatttaatattaaat 6180293  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |   |||||| ||| ||||||||||||| ||||||||    
T  6180294 gtacaagttccaatataaaatttctattttaaacttcttaacatgtgca 6180342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 7520164 - 7520069
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaa 98  Q
    ||||||||||||||||||||||||| ||||||| | ||||| |||| ||| |||| ||||| ||||||||| |||||||| ||||| |||| ||||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgttatatattaaatacaaaa 7520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 21854286 - 21854139
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||||  ||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||| ||| | ||| ||||||||||||||     
T  21854286 aacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaat 21854188  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| ||||||| |||| ||||||||||| ||| ||||||||    
T  21854187 gtacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 21854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34801976 - 34802123
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||||||    |||||||||||||| |||     
T  34801976 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaat 34802075  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| || ||||||||| | ||||||||||||| ||||||||    
T  34802076 gcacaagttcc-agacaaaattaccattttaaacttcttaacatgtgca 34802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 10896446 - 10896509
Alignment:
Q  85 tatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||||||||||| ||||||||  ||| ||| |||||||||||||||||||| ||||||||    
T  10896446 tatttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaacatgtgca 10896509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 30363152 - 30363017
Alignment:
Q  14 ttgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaaatacaagttccta 112  Q
    ||||||||||||| |  ||||||   |||||||||| ||||||||  || ||||| ||||||||    ||||||||||||||||||   ||||||||| |    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 30363053  T
Q  113 gtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||| |||||| |||||| || ||||||||||||    
T  30363052 gtcaaagttactattttaaatttgttatcatgtgca 30363017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 22167345 - 22167491
Alignment:
Q  3 catgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaat 101  Q
    ||||||||| |||||||||||||||  ||||||  | ||||||||||  |||||||  || ||||||||||| |||   |  ||||||||||| |||  |    
T  22167345 catgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaatgt 22167444  T
Q  102 acaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||| |  |||| || ||| ||||||||||||||||||||||    
T  22167445 acaagttccaatacaaagtttctattttaaacttcttatcatgtgca 22167491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 40799425 - 40799352
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||||||||||||||| || ||||||| | |  ||||||| |||||||| ||| ||||||||||||||    
T  40799425 atgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaaaataaaaattatttattaaa 40799352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 1502889 - 1502742
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| ||||||||  || |||||||| |  ||| |||| |||||||||| ||||     
T  1502889 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaa-caacaattatttaacaaaaagttatatatttaatacaaaat 1502791  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | ||| |||| |  |||| |||||| |||||| |||||| ||||||||    
T  1502790 gttcaaattccaatgcaaagttactattttaaatttcttaacatgtgca 1502742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 6307511 - 6307658
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||| ||||||||||||||||| |  | |||| || |||| |||  || ||||||||||| |||  ||| ||| |||||| ||||     
T  6307511 aacatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-ttaatagaaaat 6307609  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| | |||||  || |||||||||||||||| ||||||||    
T  6307610 acacaagttccaaatcaaacatattactttaaacttcttaacatgtgca 6307658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 44007612 - 44007552
Alignment:
Q  88 ttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||| ||||||||| ||| ||| || ||||||||||||||||| ||||||||    
T  44007612 ttaatataaaaaacacaagttccaagttaaagttgctactttaaacttcttaacatgtgca 44007552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39627741 - 39627643
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaa 98  Q
    ||||||||||||||| |||||||||| | |||||||   || ||||||| ||||||||  || ||| | ||||| ||| ||||||||||||||||||||    
T  39627741 aacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaa 39627643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13321884 - 13322032
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||| ||||||||||  ||||||  | ||||||||||  |||||||  || |||||||| || ||| |||  ||||||||||| |||     
T  13321884 aacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttttatatttaatattaaat 13321983  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||| |||| |  ||||||| ||| ||||||||||||| ||| ||||    
T  13321984 gtacaaattccaatacaaaatttctattttaaacttcttaacatatgca 13322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 3096298 - 3096365
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||||||||||||||| | |||||   ||| ||||||| ||||||||| || ||||||||||||    
T  3096298 tacatatttaatataaaaaacataagttttaagttaaaattattactttaaattttttatcatgtgca 3096365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 9516626 - 9516697
Alignment:
Q  38 gaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaatacaagtt 108  Q
    |||||||||||||||||||||  |  ||||||||||| ||| |||| ||||||||||||||| | |||||||    
T  9516626 gaagtaacttttcattgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagtt 9516697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 11744996 - 11744922
Alignment:
Q  3 catgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||| ||||||||||||||| || |||| | |  ||||||| ||||||||  || ||||||||||||||    
T  11744996 catgtgcaatgttgcacatgttaaagaaattaaaagtataaactttttattgaaaaacaacaattatttattaaa 11744922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 47355544 - 47355490
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    ||||||||||||||||||||||||| ||||||| | |  ||||||| ||||||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaa 47355490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 21391985 - 21391924
Alignment:
Q  84 atatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
    |||||| |||||||| | ||||||||  || |||| |||||||||||||||||||| |||||    
T  21391985 atattttatataaaatacacaagttctaagccaaagttactactttaaacttcttaacatgt 21391924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22331631 - 22331704
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt 74  Q
    ||||||||||| ||||||||||||||| || ||||  | ||||||||||  |||||||  || |||||||||||    
T  22331631 aacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattatttatt 22331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 25465170 - 25465215
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaactttt 49  Q
    |||||||||||||||||||||||||| |||||| | || |||||||    
T  25465170 atgtgcaatattgcacatgttaaagtcactaaaagtagcaactttt 25465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38539095 - 38539148
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattg 54  Q
    |||||||||||||||||||||||||| | ||||||| | || |||||| |||||    
T  38539095 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattg 38539148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38561313 - 38561366
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattg 54  Q
    |||||||||||||||||||||||||| | ||||||| | || |||||| |||||    
T  38561313 aacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattg 38561366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43317498 - 43317543
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaact 46  Q
    |||||||||||||||| ||||||||||| ||||||| | |||||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaact 43317543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 43671743 - 43671795
Alignment:
Q  46 ttttcattgaaaattaataattatttattaaatgttacatatttaatataaaa 98  Q
    |||| ||| ||||| || |||||||||||||| |||| |||||||||||||||    
T  43671743 tttttatttaaaatcaacaattatttattaaaagttatatatttaatataaaa 43671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 52948 - 52801
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||| |||||| ||||||||||||||| ||||||    
T  52948 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 52849  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  52848 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgca 52801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 145686 - 145833
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||| |||||| ||||||||||||||| ||||||    
T  145686 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 145785  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  145786 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgca 145833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2795532 - 2795679
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||| |||||| ||||||||||||||| ||||||    
T  2795532 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaa 2795631  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  2795632 cacaagttccaagtcaaagttactactttaaacttcttaacatgtgca 2795679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9184216 - 9184363
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||| ||||||||||||||||| ||||||||| | |||||||||||||||||||  |||||||||| ||||||   ||||||||||||||||||||    
T  9184216 aacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaactacatatttaatataaaaaa 9184315  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||| ||| |||||||||||||||||||| ||||||||    
T  9184316 cacaagttccaagttaaagttactactttaaacttcttaacatgtgca 9184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 11375972 - 11376113
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatac- 103  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| ||     
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaagctacatatttaatataaaaaacaca 11376071  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
    || || | ||||||| |||||||||||||||| |||||||||    
T  11376072 aaatttcaagtcaaagttactactttaaactttttatcatgt 11376113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15190881 - 15191029
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatat-aaaaa 99  Q
    |||||||||||||||||| ||||||| |||| |||| | ||||| |||||||||||||  || ||||||| |||||| |||||||||||||||| |||||    
T  15190881 aacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaagttacatatttaatataaaaaa 15190980  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||| | |||||||||||||||||||||||||||| ||||||||    
T  15190981 acacaagtttcaagtcaaaattactactttaaacttcttaacatgtgca 15191029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 31366121 - 31365975
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttc--attgaaaattaataattatttattaaatgttacatatttaatataaaa 98  Q
    |||||||||||||||||||||||||| ||| ||||| | ||||||||||   ||||||||  || ||||||| |||||||||||||||||||||||||||    
T  31366121 aacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaa 31366022  T
Q  99 aatacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
    || ||||||||| ||||||| |||||| ||||||||||||| |||||    
T  31366021 aacacaagttccaagtcaaagttactaatttaaacttcttaacatgt 31365975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 4047429 - 4047568
Alignment:
Q  9 caatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagtt 108  Q
    |||||||||| ||||||| ||||||||| | |||||||||||||||||||  || |||| || |||||| | |||||||||||||||||||| |||||||    
T  4047429 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtt 4047528  T
Q  109 cctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    || ||| ||| |||||||||||||||||||| ||||||||    
T  4047529 ccaagttaaagttactactttaaacttcttaacatgtgca 4047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 30328496 - 30328349
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||||||||||||||  |||||||| | ||| | |||||||| ||||  || ||||||| |||||| | ||||||||||||||||||||    
T  30328496 aacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 30328397  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||| ||| |||||||||||||||||||| ||||||||    
T  30328396 cacaagttccaagttaaagttactactttaaacttcttaacatgtgca 30328349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 11636740 - 11636887
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgtt-acatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||  || ||||| ||||||||  || ||||||||||||||||      
T  11636740 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaatg 11636839  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||| | ||||||| |||||||||||||||||||||||||||||    
T  11636840 c-acaagtttcaagtcaaagttactactttaaacttcttatcatgtgca 11636887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 28629890 - 28630034
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatac 103  Q
    |||| |||||||||||||||||||| |||||||   | |||||||||||||||||  || |||||||||||||| |||||||||||||||||||||| ||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacac 28629989  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||  | ||| |||  || |||||||||||||||||||||||||    
T  28629990 aagtctcaagttaaagatattactttaaacttcttatcatgtgca 28630034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12642162 - 12642015
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||| ||||||||| | ||||||| | ||||| |||||||||||||  || ||||||   ||||||||||||||||||||||||||||    
T  12642162 aacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaatgttacatatttaatataaaaaa 12642063  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| | ||||| ||| || ||||||||||||| ||||||||    
T  12642062 cacaagttccaaatcaaagttattaatttaaacttcttaacatgtgca 12642015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34578020 - 34578167
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||| |||||||||| ||||||||| | | ||| |||||||||||||| || |||| || |||||| | ||||||||||||||||||||    
T  34578020 aacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaagctacatatttaatataaaaaa 34578119  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||   ||| ||| |||||| ||||||||| ||| ||||||||    
T  34578120 tacaagttttaagttaaagttactattttaaactttttaacatgtgca 34578167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 41350263 - 41350358
Alignment:
Q  53 tgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||| || |||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  41350263 tgaaaatcaacaattatttattaaaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaacttcttaacatgtgca 41350358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8103749 - 8103602
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| | |||||||   |||||||||| |||||||   || ||||| ||||||||  | |||||| |||||||||||     
T  8103749 aacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaacc-aacaattaattattaaaaatctacataattaatataaaat 8103651  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  8103650 gcacaagttccaagtcaaagttactactttaaacttcttatcatgtgca 8103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 5958293 - 5958196
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaa 97  Q
    ||||||||||||||| |||||||||||| ||||||| | ||||| |||||||||||||| || ||||| ||||| |||  ||||||||||||||||||    
T  5958293 aacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatatttaatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 10665134 - 10664987
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||| ||||||||| | | ||||||||||||||||| || |||||||||||| ||| |||| | |||||||||  ||     
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa-tattaattatttattaaaaagttataaatttaatatgcaat 10665036  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| || |||| |||| | |||||| ||||||  |||||||    
T  10665035 acacaagttccaagacaaacttaccattttaaatttcttaagatgtgca 10664987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 3398228 - 3398376
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||   ||||||||||||| ||| |||  ||||||||||| |||     
T  3398228 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 3398327  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  3398328 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 3398376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 14466598 - 14466519
Alignment:
Q  66 ttatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
    ||||| |||||| | |||||||||||||||||||| ||||||| | ||| ||| |||||||||||||||||||| |||||    
T  14466598 ttattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgt 14466519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24329804 - 24329657
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||||  ||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||| ||| | ||| ||||||||||||||     
T  24329804 aacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaat 24329706  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| ||||||| |||| ||||||||||| ||| ||||||||    
T  24329705 gtacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 24329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 18150485 - 18150575
Alignment:
Q  64 aattatttattaaa-tgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgcagaaaa 153  Q
    |||||||||||||| ||||| |||||||||| |||| ||||||||||  |  ||||||||||| ||||||||||||| |||| | ||||||    
T  18150485 aattatttattaaaatgttatatatttaatacaaaatatacaagttctaacgcaaaattactattttaaacttcttaacatgggaagaaaa 18150575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 30839790 - 30839937
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  30839790 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 30839888  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  30839889 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 30839937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 36597588 - 36597735
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  36597588 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 36597686  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  36597687 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 36597735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 16174762 - 16174644
Alignment:
Q  30 aactaaaggaagtaacttttcattgaaaattaataattatttattaaatg-ttacatatttaatataaaaaatacaagttcctagtcaaaattactactt 128  Q
    ||||||| | |||||||||||||||||||  || ||||| ||||||||   ||||||||||||||||||    ||||||| | | ||||| |||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatataaatgc-acaagtttcaattcaaagttactactt 16174664  T
Q  129 taaacttcttatcatgtgca 148  Q
    |||| ||||||| |||||||    
T  16174663 taaatttcttatgatgtgca 16174644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10658457 - 10658362
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaa 98  Q
    ||||||||| ||||| |||||| ||||| ||||||| | || |||||| ||||||||| |||  ||| |||||||||  ||| |||||||||||||||    
T  10658457 aacatgtgcgatattacacatgataaaggaactaaaagtagcaactttacattgaaaaataa--attctttattaaaaattatatatttaatataaaa 10658362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40512960 - 40513016
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    |||||||||||||||||||||||||| ||||||| | | ||||| |||| |||||||    
T  40512960 aacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaa 40513016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11250126 - 11250091
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  11250126 aacatgtgcaatattgcacatgttaaagcaactaaa 11250091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32020154 - 32020006
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt--aaatgttacatatttaatataaaa 98  Q
    ||||||||||||||||||| |||||| | |||||||   ||||||||||| |||||||  |   |||| |||||  ||| ||||  ||||||||||| ||    
T  32020154 aacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgatta-ttattaaaaaagttatctatttaatatagaa 32020056  T
Q  99 aatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | ||||||||| || |||| |||| | |||||| |||||| ||||||||    
T  32020055 tacacaagttccaagacaaacttaccattttaaatttcttaacatgtgca 32020006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 28378720 - 28378753
Alignment:
Q  3 catgtgcaatattgcacatgttaaagtaactaaa 36  Q
    ||||||||||||||||||||||||||||| ||||    
T  28378720 catgtgcaatattgcacatgttaaagtaattaaa 28378753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 29538742 - 29538827
Alignment:
Q  7 tgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaat 92  Q
    ||||||| | || ||||||| | || |||| |||||||||||||||| ||||  || |||||||||||||| | || |||||||||    
T  29538742 tgcaatagtacaaatgttaatgcaattaaaagaagtaacttttcattaaaaaccaacaattatttattaaaagctatatatttaat 29538827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 18841875 - 18841727
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||     
T  18841875 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 18841776  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||| || | |  ||||||| ||| ||||||||| ||| ||| ||||    
T  18841775 gtacaaatttcaatacaaaatttctattttaaactttttaacatatgca 18841727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 7e-45; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 1203610 - 1203757
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||| ||||||||||||||| ||||  ||||||||  ||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||    
T  1203610 aacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaaacaaataattattaattaactgttacatatttaatataaaaaa 1203709  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||  || |||||||||||||||||||||||||||||||||||    
T  1203710 cacaagtttttaatcaaaattactactttaaacttcttatcatgtgca 1203757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13328110 - 13327963
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||    
T  13328110 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 13328011  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||| | ||||||| |||||| ||||||||||||| ||||||||    
T  13328010 cacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgca 13327963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10129112 - 10129259
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| |||||||||   ||||| |||||||||||||  || ||||||| |||||| | ||||||||||||||||||||    
T  10129112 aacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 10129211  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  10129212 cacaagttccaagttaaaattactactttaaacttcttaacatgtgca 10129259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7140628 - 7140481
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||||  || ||||||| ||||||   ||||||||||||||||||||    
T  7140628 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaa 7140529  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||| ||| ||||||||||||||||||||||||  |||||||    
T  7140528 cacaagttccaagttaaaattactactttaaacttcttaatatgtgca 7140481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 19344005 - 19343858
Alignment:
Q  2 acatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaata-taaaaaa 100  Q
    ||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||  || ||||||| | |||| ||||||||||||||| |||||||    
T  19344005 acatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagtaaaagttacatatttaatattaaaaaa 19343906  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||| | |||||||||||||||||||||| | ||| ||||||||    
T  19343905 tacaagtttcaagtcaaaattactactttaaacgtgttaacatgtgca 19343858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39701972 - 39701825
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||||| |||||||  || ||||| | |||||| ||||||||||||||||||||||    
T  39701972 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagttacatatttaatataaaaaa 39701873  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| || | ||||||| |||||||||||||||| ||| ||||||||    
T  39701872 cacaaatttcaagtcaaagttactactttaaacttgttaacatgtgca 39701825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 40210990 - 40210843
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||| ||||||| ||||||||| | | |||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||    
T  40210990 aacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaa 40210891  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| |||  ||||||| |||||| ||||||| ||||| ||||||||    
T  40210890 cacaaattcaaagtcaaagttactaatttaaacgtcttaacatgtgca 40210843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 9801678 - 9801824
Alignment:
Q  2 acatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaat 101  Q
    ||||||||||||||| |||| ||||||||| |||| | |||||||||||||||||||| || ||||||| |||||| |||| ||||||||||||| |||     
T  9801678 acatgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttatatatttaatataacaaac 9801777  T
Q  102 acaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||| | ||||||| |||||||||||||||||||| ||||||||    
T  9801778 ataagtttcaagtcaaagttactactttaaacttcttaacatgtgca 9801824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 35678444 - 35678297
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||  || ||||| ||||| |||  ||||||||||||||| |||     
T  35678444 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaat 35678346  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||| | ||||||| |||||||||||||||||||||||||||||    
T  35678345 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtgca 35678297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9743870 - 9744013
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||||  ||||||||   ||||||| | ||||| |||| ||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  9743870 aacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaa 9743969  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatg 144  Q
     | ||||||| ||||||| |||||||||||||||||||||||||    
T  9743970 cataagttccaagtcaaagttactactttaaacttcttatcatg 9744013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 38527829 - 38527975
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaa----taattatttattaaatgttacatatttaatataa 96  Q
    |||||||||||||||||||||||||| | ||||||| | | |||||||||||||||||  ||    || |||||||||||| | ||||||||||||||||    
T  38527829 aacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattatttatttattaaaagctacatatttaatataa 38527928  T
Q  97 aaaatacaagttcctagtcaaaattactactttaaacttcttatcat 143  Q
    |||| |||| |||| | ||||||||| ||||||||||||||||||||    
T  38527929 aaaacacaaattccaaatcaaaattattactttaaacttcttatcat 38527975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 18567545 - 18567438
Alignment:
Q  41 gtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttat 140  Q
    ||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||| |||||||||||||     
T  18567545 gtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaacttcttaa 18567446  T
Q  141 catgtgca 148  Q
    ||||||||    
T  18567445 catgtgca 18567438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14816295 - 14816148
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||  || ||||| ||||| |||  ||||||||||||||| |||     
T  14816295 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaat 14816197  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | |||||||   ||||||| ||||||||||||| |||||||||||||||    
T  14816196 acacaagttttaagtcaaagttactactttaaatttcttatcatgtgca 14816148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14829445 - 14829592
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||  || ||||| ||||| |||  ||||||||||||||| |||     
T  14829445 aacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaat 14829543  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | |||||||   ||||||| ||||||||||||| |||||||||||||||    
T  14829544 acacaagttttaagtcaaagttactactttaaatttcttatcatgtgca 14829592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 4080563 - 4080416
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgtt-acatatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||| | || |||| | ||||||||||||||||||| ||| ||||| ||| ||||  || ||||||||||||||||      
T  4080563 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaatg 4080464  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||| | ||||||| ||||||||||||| |||||||||||||||    
T  4080463 c-acaagtttcaagtcaaagttactactttaaatttcttatcatgtgca 4080416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 26682076 - 26682224
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttc-attgaaaattaataattatttattaaat-gttacatatttaatataaaa 98  Q
    |||||||||||||||||||||||||||  ||||||| | ||||| ||||  ||||||||  || ||||||||||||||  | |||| |||||||||||||    
T  26682076 aacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaac-aacaattatttattaaaaagctacacatttaatataaaa 26682174  T
Q  99 aatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
       ||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  26682175 tgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgca 26682224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 4084712 - 4084565
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgtt-acatatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||| | || |||| | ||||||||||||||||||| ||| ||||| ||| ||||  || ||||||||||||||||      
T  4084712 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaatg 4084613  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      | ||||| | ||||||| ||||||||||||| |||||||||||||||    
T  4084612 c-ataagtttcaagtcaaagttactactttaaatttcttatcatgtgca 4084565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 4103019 - 4102872
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgtt-acatatttaatataaaaa 99  Q
    |||||||| ||||||||||||||||| | || |||| | ||||||||||||||||||| ||| ||||| ||| ||||  || ||||||||||||||||      
T  4103019 aacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatataaatg 4102920  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      | ||||| | ||||||| ||||||||||||| |||||||||||||||    
T  4102919 caa-aagtttcaagtcaaagttactactttaaatttcttatcatgtgca 4102872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12131991 - 12132139
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||| ||||||| | || ||||||| ||||||||   | || |||||||| ||| |||| |||||||||||||||     
T  12131991 aacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaat 12132090  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| ||||||||||||| |||||| ||||||||    
T  12132091 gttcaagttccaatacaaacttactactttaaatttcttaacatgtgca 12132139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 31812121 - 31812269
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| |||| |||||||| ||| | ||||||||| ||| | |||||||||||||| |||     
T  31812121 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaat 31812220  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| |||||||||||| | |||||||||||||  |||||||    
T  31812221 gcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgca 31812269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 45519651 - 45519584
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  45519651 tacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttatcatgtgca 45519584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 8140593 - 8140723
Alignment:
Q  18 acatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaa 117  Q
    ||||||||| | ||||||| | ||| | |||||||||||||  || |||||||||||||| | |||||||||||||||||||| | || ||   ||||||    
T  8140593 acatgttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacataaattttaagtcaa 8140692  T
Q  118 aattactactttaaacttcttatcatgtgca 148  Q
    ||||| |||||||| ||||||| ||||||||    
T  8140693 aattattactttaatcttcttaacatgtgca 8140723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8284739 - 8284593
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt--aaatgttacatatttaatataaaa 98  Q
    |||||||||| ||||||||||||||||| ||||||| | |||||||||| ||| ||||  || |||||||||||  |||    || ||||||||||||||    
T  8284739 aacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatttaatataaaa 8284640  T
Q  99 aatacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
     | ||||||||| |||| || || ||| ||||||||||||| |||||    
T  8284639 tacacaagttccaagtcgaagttgctaatttaaacttcttaacatgt 8284593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 39703466 - 39703561
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||| || ||||  || |||||    ||||| ||||||||||||||||||||||    
T  39703466 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttaaaaaccaacaattacgggttaaaagttacatatttaatataaaaaa 39703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6818025 - 6818170
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||| | ||||||||| |||||||   ||||||||| |||||||||  || ||||||||||| ||| |||  ||| |||||||||||     
T  6818025 aacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaat 6818124  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
      ||||||||| |  |||  |||||| ||||||||||||| |||||    
T  6818125 gcacaagttccgatacaattttactattttaaacttcttaacatgt 6818170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13496902 - 13496825
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaagga-agtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||||||||||||||||||||| |||||||  | ||||||||| |||||||||  || ||||||||||||||    
T  13496902 aacatgtgcaatattgcacatgttaaaggaactaaaaaatagtaactttacattgaaaaagaacaattatttattaaa 13496825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 20514640 - 20514789
Alignment:
Q  1 aacatgtgcaa-tattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaa 98  Q
    ||||||||||| ||||||||||| ||||| |||| || | ||||| || | |||||||| ||  ||||||||||||||  |||| |||||||||||||||    
T  20514640 aacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatttaatataaaa 20514739  T
Q  99 aatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      |||||||||| || |||| |||| | |||||| |||||| | ||||||    
T  20514740 tgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgca 20514789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35746058 - 35745981
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat 78  Q
    |||||||||||||||| |  |||||||||||||||| ||| |||||||||||||||||  || ||||||| |||||||    
T  35746058 aacatgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattattaattaaat 35745981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 35741019 - 35740951
Alignment:
Q  80 ttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||| ||||| || ||||||||||||    
T  35741019 ttacatatttaatataaaaaacacaaatttttagtcaaaattactacattaaaatttttatcatgtgca 35740951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 39024946 - 39024879
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||| |||||||||||   |||| |||| ||||||| |||||||||||||||||||||||||||||    
T  39024946 tacatagttaatataaaatgcacaaattccaagtcaaagttactactttaaacttcttatcatgtgca 39024879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3306224 - 3306168
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| |||| |||||||    
T  3306224 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 3306168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 38843712 - 38843860
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||     
T  38843712 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 38843811  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |   ||||||  || ||||||||||||| ||||||||    
T  38843812 gtacaagttccaataaaaaatttatattttaaacttcttagcatgtgca 38843860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 26834569 - 26834708
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||| ||||| |||||||||| |||  || ||||| | ||||| |||| ||||||||  || | ||||||||||||  | |||||||||||||| |||     
T  26834569 aacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 26834668  T
Q  100 atacaagttcctagtcaaaattactactttaaacttctta 139  Q
      ||||||||| |||||||||||| | |||||| ||||||    
T  26834669 gcacaagttccaagtcaaaattaccattttaaatttctta 26834708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10974724 - 10974626
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaa 98  Q
    ||||| |||| ||||| | ||||||||| ||||||| | |||||| ||| ||||||||  ||||| |||||||| |||  |||||||||||||||||||    
T  10974724 aacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatatttaatataaaa 10974626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7750676 - 7750733
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    |||||||||||||||||||||||||||  ||||||| | || ||||||| ||||||||    
T  7750676 aacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2161396 - 2161452
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||||||    
T  2161396 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 2161452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 31451420 - 31451480
Alignment:
Q  88 ttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||| ||||||| | ||| ||| |||||||||||||||||||| || |||||    
T  31451420 ttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacacgtgca 31451480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 37264521 - 37264585
Alignment:
Q  13 attgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||||||||||  ||||||| | ||||| || | ||||||||| |||||||||||||||||    
T  37264521 attgcacatgttaaaacaactaaaagtagtaaattgttattgaaaatcaataattatttattaaa 37264585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45005978 - 45006125
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| | |     
T  45005978 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattagat 45006077  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| ||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  45006078 gtacatgttccaatacaaaatt-ctattttaaacttcttaacatgtgca 45006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 45516316 - 45516395
Alignment:
Q  20 atgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||  |||||||| | |||||||||| ||||||| | || |||||||||||||| | ||||||||||||||| ||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaact-aacaattatttattaaaagctacatatttaatatataaaa 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 11117167 - 11117132
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  11117167 aacatgtgcaatattgcacatgttaaagcaactaaa 11117132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 26364159 - 26364124
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  26364159 aacatgtgcaatattgcacatgttaaggtaactaaa 26364124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 14961754 - 14961685
Alignment:
Q  79 gttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||| ||||||||| |||||   ||||||||| |  ||||||||||| ||||||||||||| ||||||||    
T  14961754 gttaaatatttaatttaaaatgcacaagttccaatacaaaattactattttaaacttcttagcatgtgca 14961685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 28014965 - 28014880
Alignment:
Q  64 aattatttatt-aaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||| ||| |||  ||||||||||| |||  |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  28014965 aattatttattcaaaagttttatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 28014880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33514670 - 33514613
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    |||||||||||||||||||||||||| | ||||||| | || ||| ||| ||||||||    
T  33514670 aacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaa 33514613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 34249685 - 34249809
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat--gttacatatttaatataaaa 98  Q
    |||||||||||| ||| ||||| |||   | ||||| | | ||| |||||||||||||  | |||||||||||||||   |||| |||||||||||||||    
T  34249685 aacatgtgcaatgttgtacatgataagacagctaaaagtattaatttttcattgaaaaacactaattatttattaaaaaagttaaatatttaatataaaa 34249784  T
Q  99 aatacaagttcctagtcaaaattac 123  Q
     | ||||||||| || |||| ||||    
T  34249785 tacacaagttccaagacaaacttac 34249809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 7e-39; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 5363062 - 5362925
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||  || |||| || |||||| | ||||||||||||||||||||    
T  5363062 aacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaa 5362963  T
Q  101 tacaagttcctagtcaaaattactactttaaacttctt 138  Q
     ||||||||| ||| ||| |||||||||||||||||||    
T  5362962 cacaagttccaagttaaagttactactttaaacttctt 5362925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 22974731 - 22974604
Alignment:
Q  12 tattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcct 111  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||| |||||||||     
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 22974632  T
Q  112 agtcaaaattactactttaaacttctta 139  Q
    ||| ||| |||||| |||||||||||||    
T  22974631 agttaaagttactattttaaacttctta 22974604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 23813670 - 23813797
Alignment:
Q  12 tattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcct 111  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||| |||||||||     
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 23813769  T
Q  112 agtcaaaattactactttaaacttctta 139  Q
    ||| ||| |||||| |||||||||||||    
T  23813770 agttaaagttactattttaaacttctta 23813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 31069738 - 31069606
Alignment:
Q  14 ttgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctag 113  Q
    ||||||||||||| ||||||||| | ||||| |||| ||||||||  || ||||||| ||||||||||||||||||||||||||||| ||||||||| ||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaag 31069639  T
Q  114 tcaaaattactactttaaacttcttatcatgtg 146  Q
    ||||| |||||| ||||||||||||| ||||||    
T  31069638 tcaaagttactaatttaaacttcttaacatgtg 31069606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 2830850 - 2830703
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||| || ||||||||||||||| ||||||||| | |||||||||||||||||||  || ||||||| |||||| | ||||||||||||||||||||    
T  2830850 aacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 2830751  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| |||  | | ||| ||| || ||||||||||||| ||||||||    
T  2830750 cacaaattctaaattaaagttattattttaaacttcttaacatgtgca 2830703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10887037 - 10887185
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||||||  | ||||||||||||||||||     
T  10887037 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaat 10887136  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| | |||||||||| ||||||||||||||| ||||||||    
T  10887137 acacaagttccaaatcaaaattaccactttaaacttcttaacatgtgca 10887185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 1017948 - 1017802
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||||| |||||||| | || |||||||| | ||||||||||| |||||||  || ||||||||||| |||  |||||||||||||||||||     
T  1017948 aacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaat 1017849  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
      |||| || | ||||||| |||||||||||||||||||| ||||||    
T  1017848 gcacaactttcaagtcaaagttactactttaaacttcttaacatgtg 1017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 29863472 - 29863324
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||||| |||||||   ||||||||| |||||||||  |||||||||||||||||  |||  ||| |||||||||||     
T  29863472 aacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttatagttaatataaaat 29863373  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      | ||||||| |  |||  |||||| ||||||||||||| ||||||||    
T  29863372 gcaaaagttccgacacaattttactattttaaacttcttaacatgtgca 29863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 3850577 - 3850654
Alignment:
Q  18 acatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatata 95  Q
    ||||||||| | ||||||| | || ||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  3850577 acatgttaaggcaactaaaagtagcaacttttcattgaaaatcaataattattcattaaaagttacatatttaatata 3850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 31568121 - 31568265
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||| ||||||||||||||||||||| |||| | |||  |||| ||||| ||||||||| || |||| |||||| ||| | |||||||||| ||||||||    
T  31568121 aacacgtgcaatattgcacatgttaaggtaa-tcaag--agtagctttttattgaaaatcaacaatt-tttattcaaaagctacatatttattataaaaa 31568216  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||| | | ||||| |||||||||||||||| ||| ||||||||    
T  31568217 acacaagtttcaaatcaaagttactactttaaactttttaacatgtgca 31568265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 6016864 - 6017012
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||| |||   | ||||| | |||||||||||||||||||  || | |||||| |||||  |||| ||||||||||| |||     
T  6016864 aacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaat 6016963  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||| ||||||||||| ||| ||||||||    
T  6016964 gcacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 6017012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8977636 - 8977488
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| | ||||||| | || ||| ||| ||||||||  || ||| ||||||| ||| ||||||||||||||||||||     
T  8977636 aacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaat 8977537  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||| | |  |||| |||||| ||| ||||||||| || |||||    
T  8977536 gcacaagttacaatacaaatttactattttgaacttcttaacaagtgca 8977488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34692362 - 34692510
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||   ||||||||||||| ||| |||  ||||||||||| |||     
T  34692362 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatttaatattaaat 34692461  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  34692462 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 34692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18332858 - 18332712
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||| ||| | || ||||||||||| |||     
T  18332858 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatatttaatatgaaat 18332759  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtg 146  Q
      | ||||||| |||||||||||  ||||||||||||||| ||||||    
T  18332758 gcataagttccaagtcaaaattatcactttaaacttcttaacatgtg 18332712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 31169929 - 31169785
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaaatac 103  Q
    |||||||  ||||||||||||| |  ||||||   ||||| ||||| |||||||  |||||||| ||||||||    ||||||||||||||||||   ||    
T  31169929 tgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcac 31169830  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||| ||||||| ||||||||||||| || ||| ||||||||    
T  31169829 aagttccaagtcaaagttactactttaaatttgttaacatgtgca 31169785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 17596430 - 17596494
Alignment:
Q  81 tacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
    |||||| |||||||||||   ||||||||| | ||||| ||||||||||||||||||||||||||    
T  17596430 tacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaacttcttatcatgt 17596494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 30623334 - 30623473
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||| |||||||||||  ||||||  | ||||||||||  |||||||  || ||||||||||| ||| |||  ||||||||||| |||     
T  30623334 aacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatcaaat 30623433  T
Q  100 atacaagttcctagtcaaaattactactttaaacttctta 139  Q
     |||||||| | |  ||||||| ||| |||||||||||||    
T  30623434 gtacaagtttcaatacaaaatttctattttaaacttctta 30623473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31791086 - 31790991
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaa-gtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatata 95  Q
    ||||||||||||||||||||||||||| | ||||||| | |||||||||| ||||||||  | ||||||||  | ||| ||| | |||||||||||    
T  31791086 aacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaaacactaattattattaaaacgtttcctatttaatata 31790991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32615632 - 32615540
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaa---gtaacttttcattgaaaattaataattatttattaaatgttacatattta 90  Q
    |||||||| ||||||||| ||||||| ||||||||| | |   ||||||||||||||||||| |  ||||||| |||||| | ||||||||||    
T  32615632 aacatgtgtaatattgcatatgttaaggtaactaaaagtactagtaacttttcattgaaaatcatcaattattgattaaaagctacatattta 32615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 14228295 - 14228148
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| |||| |||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  14228295 aacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 14228197  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  14228196 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 14228148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26602600 - 26602524
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    ||||||||||||||||||||| |||| | ||||||| | ||||| |||||| ||||||  || ||||| ||||||||    
T  26602600 aacatgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaattaattattaaa 26602524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 28943938 - 28943791
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| |||| |||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  28943938 aacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 28943840  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  |||| |||||| |||||| |||||| ||||||||    
T  28943839 gttcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 28943791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 33017733 - 33017880
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| |||||||||   || || |||| ||| ||||  || |||||||| |  ||| |||| |||||||||| ||||     
T  33017733 aacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttatt-aaaaccaacaattatttaacaaaaagttatatatttaatacaaaat 33017831  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | ||||||||||  |||| |||||| |||||| || ||| ||||||||    
T  33017832 gttcaagttcctatgcaaagttactattttaaattttttaacatgtgca 33017880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 34300379 - 34300470
Alignment:
Q  9 caatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||| |||||  || |||| |  ||||||||| || |||||| |||||||||||||| ||| | ||||||||||||||||||||    
T  34300379 caatattgcacatattaaaccaattaaaagtggtaacttttgat-gaaaatcaataattatttatttaaaagctacatatttaatataaaaaa 34300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1814951 - 1814916
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  1814951 aacatgtgcaatattgcacatgttaaagcaactaaa 1814916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 10345709 - 10345674
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    |||||||||||||||||||||||||||| |||||||    
T  10345709 aacatgtgcaatattgcacatgttaaagaaactaaa 10345674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17552756 - 17552721
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  17552756 aacatgtgcaatattgcacatgttaaggtaactaaa 17552721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 29065589 - 29065447
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaatt--aataattatttattaaatgttacatatttaatataaaaaatacaa 105  Q
    ||||||||||||||||||||| ||||| | | | ||||||| |||||||||    || ||||||||||||||  ||| ||||||||||| |||   |  |    
T  29065589 gcaatattgcacatgttaaaggaactacaagtaataactttacattgaaaaaagaaaaaattatttattaaaaattatatatttaatatgaaatgcatta 29065490  T
Q  106 gttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||| |  ||| ||||||| ||||||||| ||| ||||||||    
T  29065489 gttccgatacaatattactattttaaactttttaacatgtgca 29065447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 29120442 - 29120300
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaatt--aataattatttattaaatgttacatatttaatataaaaaatacaa 105  Q
    ||||||||||||||||||||| ||||| | | | ||||||| |||||||||    || ||||||||||||||  ||| ||||||||||| |||   |  |    
T  29120442 gcaatattgcacatgttaaaggaactacaagtaataactttacattgaaaaaagaaaaaattatttattaaaaattatatatttaatatgaaatgcatta 29120343  T
Q  106 gttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||| |  ||| ||||||| ||||||||| ||| ||||||||    
T  29120342 gttccgatacaatattactattttaaactttttaacatgtgca 29120300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 34243314 - 34243344
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaacta 34  Q
    |||||||||||||||||||||||||||||||    
T  34243314 atgtgcaatattgcacatgttaaagtaacta 34243344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 2086998 - 2086949
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    ||||||||||||||||||| |||| |||| | ||||| ||||||||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29061145 - 29061057
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaatt--aataattatttattaaatgttacatatttaatat 94  Q
    ||||||||||||||||||||| ||||| | | | ||||||| |||||||||    || ||||||||||||||  ||| |||||||||||    
T  29061145 gcaatattgcacatgttaaaggaactacaagtaataactttacattgaaaaaagaaaaaattatttattaaaaattatatatttaatat 29061057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29074602 - 29074514
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaatt--aataattatttattaaatgttacatatttaatat 94  Q
    ||||||||||||||||||||| ||||| | | | ||||||| |||||||||    || ||||||||||||||  ||| |||||||||||    
T  29074602 gcaatattgcacatgttaaaggaactacaagtaataactttacattgaaaaaagaaaaaattatttattaaaaattatatatttaatat 29074514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29079366 - 29079278
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaatt--aataattatttattaaatgttacatatttaatat 94  Q
    ||||||||||||||||||||| ||||| | | | ||||||| |||||||||    || ||||||||||||||  ||| |||||||||||    
T  29079366 gcaatattgcacatgttaaaggaactacaagtaataactttacattgaaaaaagaaaaaattatttattaaaaattatatatttaatat 29079278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29107175 - 29107087
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaatt--aataattatttattaaatgttacatatttaatat 94  Q
    ||||||||||||||||||||| ||||| | | | ||||||| |||||||||    || ||||||||||||||  ||| |||||||||||    
T  29107175 gcaatattgcacatgttaaaggaactacaagtaataactttacattgaaaaaagaaaaaattatttattaaaaattatatatttaatat 29107087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 30591320 - 30591187
Alignment:
Q  14 ttgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttat-taaatgttacatatttaatataaaaaatacaagttccta 112  Q
    ||||||||||||| | ||||||| | ||||| |||| ||||||||   | ||||||||||  ||| |||| | |||||||| |||| ||||||||| | |    
T  30591320 ttgcacatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaa 30591221  T
Q  113 gtcaaaattactactttaaacttcttatcatgtg 146  Q
      ||||||||| | || |||||||||| ||||||    
T  30591220 tgcaaaattaccatttaaaacttcttaacatgtg 30591187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17596321 - 17596369
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaactttt 49  Q
    ||||||||||||||||||||||||||   ||||||| | ||||||||||    
T  17596321 aacatgtgcaatattgcacatgttaagacaactaaaagtagtaactttt 17596369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 26602510 - 26602478
Alignment:
Q  112 agtcaaaattactactttaaacttcttatcatg 144  Q
    ||||||| |||||||||||||||||||||||||    
T  26602510 agtcaaagttactactttaaacttcttatcatg 26602478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31039712 - 31039788
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    |||||||  |||||||||| ||||||||||| ||||   ||||||| || ||||||||  || ||||||||||||||    
T  31039712 aacatgtttaatattgcacgtgttaaagtaattaaaaatagtaactatttattgaaaaacaaaaattatttattaaa 31039788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 31503834 - 31503898
Alignment:
Q  84 atatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||||||| | ||||||||| |   ||| ||||||||||||| |||||| ||||||||    
T  31503834 atatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgca 31503898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7349697 - 7349841
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||| ||||||||||||||||||||| | ||||||| | | |||||||||||||||||  || |||||||| ||||| ||||||||||||||||||||||    
T  7349697 aacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaa 7349796  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgt 145  Q
     |||||||   ||||||| ||||||||||||||||||||||||||    
T  7349797 cacaagttttaagtcaaagttactactttaaacttcttatcatgt 7349841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 29190982 - 29190838
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatac 103  Q
    ||||||||||||||| ||||||| ||||||||| | ||||| |||||||||||||  || ||||||| |||||||||| |||||||||||| ||||| ||    
T  29190982 atgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttgcatatttaatattaaaaacac 29190883  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||| ||||||| |||||| ||||||||||||| ||||||||    
T  29190882 aagttccaagtcaaagttactaatttaaacttcttaacatgtgca 29190838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 53961350 - 53961478
Alignment:
Q  20 atgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaa 119  Q
    ||||||||||||||||| | ||||| |||||||||||||| || |||||||  |||||||||||||||||||||||||||| |||| || | ||||||||    
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaatgttacatatttaatataaaaaacacaaatttcaagtcaaaa 53961449  T
Q  120 ttactactttaaacttcttatcatgtgca 148  Q
    |||||| ||||||||||||| ||||||||    
T  53961450 ttactaatttaaacttcttaacatgtgca 53961478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 10389437 - 10389290
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||| ||||||||| |||||||||| | | |||||||| ||||||||  || ||||||| |||||| ||||||||||| ||||||||||    
T  10389437 aacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagttacatatttcatataaaaaa 10389338  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||||||  ||||||||||||||||| ||| || ||| ||||||||    
T  10389337 cacaagttctaagtcaaaattactacttgaaattttttaacatgtgca 10389290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 41415697 - 41415579
Alignment:
Q  30 aactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactacttt 129  Q
    ||||||| | |||||||||| ||||||||| || |||||||||||||| | |||||||||||||||||||| |||| || | ||||||| ||||||||||    
T  41415697 aactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaagctacatatttaatataaaaaacacaaatttcaagtcaaagttactacttt 41415598  T
Q  130 aaacttcttatcatgtgca 148  Q
    |||||| ||||||||||||    
T  41415597 aaacttattatcatgtgca 41415579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 36000109 - 35999969
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||| |||||||||| ||||||||| ||||||||| | |||||||||| ||||||||  || ||||||| |||||| | ||||||||||||||||||||    
T  36000109 aacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 36000010  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||       ||| |||||||||||||||||||| ||||||||    
T  36000009 cacaagtt-------aaagttactactttaaacttcttaacatgtgca 35999969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 48910944 - 48910824
Alignment:
Q  28 gtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactact 127  Q
    ||||||||| | ||||| |||| |||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||| |||||||| ||| ||||||||    
T  48910944 gtaactaaaagtagtaattttttattgaaaattaacaattattgattaaaagctacatatttaacataaaaaacacaaattcctagttaaagttactact 48910845  T
Q  128 ttaaacttcttatcatgtgca 148  Q
    |||||||||||| ||| ||||    
T  48910844 ttaaacttcttaacatatgca 48910824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 23051488 - 23051404
Alignment:
Q  64 aattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||| | ||||||| ||||||||||||| |||||||||||||||    
T  23051488 aattatttattaaaagttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttcttatcatgtgca 23051404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23553578 - 23553726
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttc-attgaaaattaataattatttattaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| |||||||||   ||||| ||||  ||||||||  || ||||||| ||||||   |||||||||||||||||||    
T  23553578 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaa 23553677  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||| ||   ||| ||| |||||||||||||||| ||| ||||||||    
T  23553678 atacaaattttaagttaaagttactactttaaactttttaacatgtgca 23553726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 49228365 - 49228457
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaata 93  Q
    |||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||  || |||| || ||||||||||||||||||||||    
T  49228365 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaatgttacatatttaata 49228457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 49650223 - 49650318
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||  || ||||||| | |||||||||||| ||||||||||||||    
T  49650223 tgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattattgaataaatgttacatgtttaatataaaaaa 49650318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34941286 - 34941434
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    |||||||| |||||||||||| |||| ||||||||| | |  ||||||| ||||||||  || || |||||||||||  |||| ||||| |||| ||||     
T  34941286 aacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatattaaatacaaaat 34941385  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  ||||||||||| ||||||||||||||||||||||    
T  34941386 gtacaagttccaatgcaaaattactattttaaacttcttatcatgtgca 34941434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 10813658 - 10813516
Alignment:
Q  7 tgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacata-tttaatataaaaaatacaa 105  Q
    |||||||||||| ||||||| | ||||||| | | |||||||| ||||||||  || |||||||| ||||| |||||||| |||||| ||||||| ||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaagttacatattttaatttaaaaaacacaa 10813559  T
Q  106 gttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||   ||||||| |||||||||||||||| ||||||| ||||    
T  10813558 attttaagtcaaagttactactttaaacttattatcatatgca 10813516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16667554 - 16667406
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||   | ||||| | ||||| |||||||||||||  || | ||||||||||||  | ||||||||||||||||||     
T  16667554 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaat 16667455  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||| | ||| |||||||  | ||||||||||||| ||||||||    
T  16667454 acacaagtttcaagttaaaattatcattttaaacttcttaacatgtgca 16667406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 52391309 - 52391454
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaata 102  Q
    ||||| ||| |||||||||||||| |||||||  | ||||||||||  |||||||  || ||||||||||| ||| |||  ||||||||||| |||  ||    
T  52391309 atgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatgta 52391408  T
Q  103 caagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  52391409 caagttccaatacaaaatttctattttaaacttcttaacatgtgca 52391454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 19451070 - 19450922
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||     
T  19451070 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 19450971  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  19450970 gtacaagttccaatacaaaatttctattttaaacttcttaacatgtgca 19450922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49332341 - 49332417
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    ||||||||||||||| |||||||||| |||| |||| | | ||||||||||||||||| || |||||||||||||||    
T  49332341 aacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaa 49332417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 54495807 - 54495659
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| ||||  |||||||  || | ||||||||||||  | |||||||||||||| |||     
T  54495807 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 54495708  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||| ||| |||| ||||||||||||||| ||||||||    
T  54495707 gcacaagttccaagttaaagttaccactttaaacttcttaacatgtgca 54495659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 4329628 - 4329750
Alignment:
Q  26 aagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattacta 125  Q
    |||||| |||| | ||||| |||| ||||||||  ||  |||||| |||||| |||||||||||||||||||||| | || || | ||||||| ||||||    
T  4329628 aagtaattaaaagtagtaatttttaattgaaaaccaacgattattgattaaaagttacatatttaatataaaaaacataaatttcaagtcaaagttacta 4329727  T
Q  126 ctttaaacttcttatcatgtgca 148  Q
    |||||||||| ||| ||| ||||    
T  4329728 ctttaaactttttaacatatgca 4329750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 49181083 - 49181228
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaata 102  Q
    ||||||||||||||||||||||| | ||||||| | || ||| ||| ||||||||  || ||| ||||||| ||| ||||||||||||||||||||   |    
T  49181083 atgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgca 49181182  T
Q  103 caagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||| | |  |||| |||||| ||| ||||||||| || |||||    
T  49181183 caagttacaatacaaatttactattttgaacttcttaacaggtgca 49181228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 51691353 - 51691497
Alignment:
Q  4 atgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaata 102  Q
    |||||||| |||||||||||||||| |||||||   ||||| | || |||||||| ||||||||||||||| ||| | || |||||||||  |||| |||    
T  51691353 atgtgcaacattgcacatgttaaagcaactaaa-atagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaattcaaaatata 51691451  T
Q  103 caagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||||| |  |||| |||||| || ||| |||||| ||||||||    
T  51691452 caagttccaatgcaaagttactatttaaaatttcttaacatgtgca 51691497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2096879 - 2097027
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||| ||||||  ||||||| |    ||||||| ||||||||  || ||||||||||| ||| |||| |||||||||||||||     
T  2096879 aacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaat 2096978  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| |  |||| |||| | ||| ||||||||| ||||||||    
T  2096979 gcacaagttccaatacaaacttaccattttgaacttcttaacatgtgca 2097027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8736980 - 8736833
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||   | ||||| | ||||| |||| ||||||||  || | ||||||||| ||| |||||||||||||||| |||     
T  8736980 aacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaat 8736881  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      || |||||| ||||||| |||| |||||||| |||||| ||||||||    
T  8736880 gcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgca 8736833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17409832 - 17409980
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  |||||||  || ||||||||||| |||   |  ||||||||||| |||     
T  17409832 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatatttaatattaaat 17409931  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||||| |  |||| || ||| ||||||||||||||||||||||    
T  17409932 gtacaagttccaatacaaagtttctattttaaacttcttatcatgtgca 17409980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19468202 - 19468350
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||     
T  19468202 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaat 19468301  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||||||| | |  ||||||| ||| ||||||||||||| ||||||||    
T  19468302 gtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgca 19468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 47327058 - 47326914
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaaatac 103  Q
    ||||||| ||||||||||||||   | ||||| | ||||| |||||||||||||  || | ||||||||||||    |||||||||||||| |||   |     
T  47327058 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47326959  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||| ||||||| |||| ||||||||||||||| ||||||||    
T  47326958 aagttccaagtcaaagttaccactttaaacttcttaacatgtgca 47326914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 47341854 - 47341710
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgt-tacatatttaatataaaaaatac 103  Q
    ||||||| ||||||||||||||   | ||||| | ||||| |||||||||||||  || | ||||||||||||    |||||||||||||| |||   |     
T  47341854 tgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaa 47341755  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||| ||||||| |||| ||||||||||||||| ||||||||    
T  47341754 aagttccaagtcaaagttaccactttaaacttcttaacatgtgca 47341710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 50352311 - 50352458
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattt-attaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||| |||  || |||||||| |  ||| |||| |||||||||| ||||     
T  50352311 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatttaatacaaaat 50352409  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | |||||||| |  ||||||||||| |||||| |||||| ||||||||    
T  50352410 gttcaagttccaatgcaaaattactattttaaatttcttaacatgtgca 50352458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 27362406 - 27362547
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaaatacaag 106  Q
    |||| |||||| |||||||  || ||||| | ||||| |||| ||||||||  || | |||||||| |||  | |||||||||||||| |||   ||||     
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaa 27362505  T
Q  107 ttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||| |||||||||||| ||||||||||||||| ||||||||    
T  27362506 ttccaagtcaaaattaccactttaaacttcttaacatgtgca 27362547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40049567 - 40049615
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaactttt 49  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||    
T  40049567 aacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttt 40049615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 27756574 - 27756708
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaataca 104  Q
    |||||||||||||||||||||| | ||||||| | || |||||| ||||| |||  |  |||||||  | ||| ||||  ||||||||||| || |||||    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatttaatatagaatataca 27756673  T
Q  105 agttcctagtcaaaattactactttaaacttctta 139  Q
    |||| | || |||| || |||||||||| ||||||    
T  27756674 agtttcaagacaaacttgctactttaaatttctta 27756708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9327039 - 9326982
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    ||||| |||||||||||| ||||||||| ||||||  | |||||||||||||||||||    
T  9327039 aacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9326982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9373761 - 9373704
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    ||||| |||||||||||| ||||||||| ||||||  | |||||||||||||||||||    
T  9373761 aacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9373704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9382073 - 9382016
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaa 58  Q
    ||||| |||||||||||| ||||||||| ||||||  | |||||||||||||||||||    
T  9382073 aacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9382016  T

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Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9759311 - 9759255
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||| |||||||    
T  9759311 aacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaa 9759255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23545484 - 23545632
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||||||||| |||||||||||||||  ||||||  | ||||| ||||  |||||||  || ||||||||||| ||| |||  ||||||||||| |||     
T  23545484 aacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatatttaatattaaat 23545583  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     ||||| |||| |  |||||||  || ||||||||| ||| ||||||||    
T  23545584 gtacaatttccaatacaaaatttatattttaaacttattaacatgtgca 23545632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 49228754 - 49228810
Alignment:
Q  92 tataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||| ||||||||| ||||||| |||||| ||||||||||||| || |||||    
T  49228754 tataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacacgtgca 49228810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 36968296 - 36968331
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaa 36  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36968296 aacatgtgcaatattacacatgttaaagtaactaaa 36968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 39876844 - 39876895
Alignment:
Q  6 gtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    ||||||||||||||||||||| ||||||||| | ||||| |||| |||||||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 39876895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 13009913 - 13009815
Alignment:
Q  13 attgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattattta-ttaaatgttacatatttaatataaaaaatacaagttcc 110  Q
    |||||| ||||||||  ||||||| | | ||| |||| |||||||| ||||||||||||| | ||| | || |||||||||| |||| |||||||||||    
T  13009913 attgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagctatatatttaatacaaaatatacaagttcc 13009815  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 24684908 - 24684993
Alignment:
Q  64 aattatttatt-aaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||||||||| ||| |||  ||||||||||| |||  |||||||||| |  ||||||| ||| ||||||||||||| ||||||||    
T  24684908 aattatttattcaaaagttttatatttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgca 24684993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6875509 - 6875617
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||| |||||||||||||||||||||  |||||||   |||||  ||| |||| ||| ||  ||||||||||| ||| |||| | |||||||||||||     
T  6875509 aacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaatataaaat 6875608  T
Q  100 atacaagtt 108  Q
    | |||||||    
T  6875609 acacaagtt 6875617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10658613 - 10658557
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    ||||||||||||||| |||||||||| ||||||||| | || || |||| |||||||    
T  10658613 aacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaa 10658557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10872758 - 10872702
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaa 57  Q
    ||||||||||||||| |||||||||| ||||||||| | || || |||| |||||||    
T  10872758 aacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaa 10872702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 27019272 - 27019416
Alignment:
Q  5 tgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaaatac 103  Q
    ||||||| |||||||||||||||  ||||||  | ||||||||||  ||| |||  || ||||||||||| ||| |||  ||||||||||| |||  |||    
T  27019272 tgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtac 27019371  T
Q  104 aagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    ||||| | |  ||||||| ||| ||||||||| ||| ||| ||||    
T  27019372 aagtttcaatacaaaatttctattttaaactttttaacatatgca 27019416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13094 - 13241
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaa 100  Q
    |||||||||||||||||| ||||||| ||||||||| | ||||| |||||||||||||  || |||| || |||||| | ||||||||||||||||||||    
T  13094 aacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaa 13193  T
Q  101 tacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     |||| |||| | | ||| |||||| ||||||||||||| ||||||||    
T  13194 cacaaattccaaattaaagttactattttaaacttcttaacatgtgca 13241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 3572 - 3435
Alignment:
Q  12 tattgcacatgttaaagtaactaaaggaagtaactttt-cattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcc 110  Q
    ||||||||||||||| ||||||||| | |||||||||| |||| ||||  || ||||||| |||||| |||||||||||||||||||||| | |||||||    
T  3572 tattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaagttacatatttaatataaaaaacataagttcc 3473  T
Q  111 tagtcaaaattactactttaaacttcttatcatgtgca 148  Q
     | | ||| | ||||||||||||||||||  |||||||    
T  3472 aatttaaagtaactactttaaacttcttaatatgtgca 3435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5699 - 5847
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttc-attgaaaattaataattatttattaaatgttacatatttaatataaaaa 99  Q
    |||||||||||||||||||||||||| |||||||||   ||||| ||||  ||||||||  || ||||||| ||||||   |||||||||||||||||||    
T  5699 aacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaa 5798  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    |||||| ||   ||| ||| |||||||||||||||| ||| ||||||||    
T  5799 atacaaattttaagttaaagttactactttaaactttttaacatgtgca 5847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 37284 - 37136
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaat-gttacatatttaatataaaaa 99  Q
    ||||||||||| ||||||||||||||  || ||||| | ||||| |||| ||||||||  || | ||||||||||||  | |||||||||||||| |||     
T  37284 aacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaat 37185  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
      ||||||||| ||||||| |||  ||||||||||||||| ||||||||    
T  37184 gcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgca 37136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 43479 - 43578
Alignment:
Q  8 gcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagt 107  Q
    |||||||||||| |||||| |||| |||| | ||||| |||||||||||||| || ||||||| |||||| |||| ||||||||||||||||||| ||||    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaattattaattaaaagttatatatttaatataaaaaatataagt 43577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 182091 - 182195
Alignment:
Q  40 agtaacttttcattgaaaattaataattatttattaaatgttacatatttaatataaaaaatacaagttcctagtcaaaattactactttaaacttctta 139  Q
    ||||| |||| ||||||||  || |||||||||||||| |||||||||||||||||||||| ||||||| | | || ||  |||||||||||||||||||    
T  182091 agtaattttttattgaaaacaaacaattatttattaaaagttacatatttaatataaaaaacacaagtttcaaatc-aacgtactactttaaacttctta 182189  T
Q  140 tcatgt 145  Q
     |||||    
T  182190 acatgt 182195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 94188 - 94112
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttattaaa 77  Q
    ||||| ||||| |||||||||||||||  ||||||| | ||||| |||| |||||||| ||||||||||||||||||    
T  94188 aacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaa 94112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16704 - 16557
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaactaaaggaagtaacttttcattgaaaattaataattatttatt-aaatgttacatatttaatataaaaa 99  Q
    ||||| ||||| |||||| ||||||||||||||||| |  | |||| || |||| |||  || ||||||||||| |||  ||| ||| |||||| ||||     
T  16704 aacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-ttaatagaaaat 16606  T
Q  100 atacaagttcctagtcaaaattactactttaaacttcttatcatgtgca 148  Q
    | ||||||||| | |||||  || |||||||||||||||| ||||||||    
T  16605 acacaagttccaaatcaaacatattactttaaacttcttaacatgtgca 16557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22491 - 22459
Alignment:
Q  1 aacatgtgcaatattgcacatgttaaagtaact 33  Q
    |||||||||||||||||||||||||||| ||||    
T  22491 aacatgtgcaatattgcacatgttaaagaaact 22459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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