View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17793_low_63 (Length: 330)
Name: NF17793_low_63
Description: NF17793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17793_low_63 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 5 - 314
Target Start/End: Original strand, 17924236 - 17924545
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924236 |
gagaagccaaagaggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
17924335 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17924336 |
agatagatgattctcagagacatctaattcttcaatattttttaacatactcacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
17924435 |
T |
|
| Q |
205 |
aagattgataaagaaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttccta |
304 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
17924436 |
aagattgataaagaaaaaagatttaaaacctctacaggtatggttcctctaagcttattatgagacagatctagatattgtaaattttgacagtttccta |
17924535 |
T |
|
| Q |
305 |
tgcttggagg |
314 |
Q |
| |
|
||||||||| |
|
|
| T |
17924536 |
agcttggagg |
17924545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 12931642 - 12931346
Alignment:
| Q |
18 |
ggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12931642 |
ggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttgtacattcaccaatttctctaggaatatcaccagatagatgattc |
12931543 |
T |
|
| Q |
118 |
tcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaag |
217 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12931542 |
tcagagacatctaatgcttcaatattttttaacatacccacttctcttggtaagctaccacttaaagagttatgtgacaagttcaataagattgataaag |
12931443 |
T |
|
| Q |
218 |
aaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
314 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12931442 |
aaaaaagatttaaaacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
12931346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 5 - 314
Target Start/End: Complemental strand, 12906566 - 12906257
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
||||||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12906566 |
gagaagccaaagaggacggtattgttccgttaaaggagttcctttgcaaatgaatatattctaagcttgtacattcaccaatttctctcggaatatcacc |
12906467 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
12906466 |
agatagatgattctcagagacatctaattctgcaatattttttaacatacccacttctcttggtaaagtaccgctcaaagagttatgtgacaagttcaat |
12906367 |
T |
|
| Q |
205 |
aagattgataaagaaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttccta |
304 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
12906366 |
aagattgataaagaaaacagatttaaaacctctacaggtatggttcctctaagcttattatgagacagatctagatattgtaaattttgacagtttccta |
12906267 |
T |
|
| Q |
305 |
tgcttggagg |
314 |
Q |
| |
|
||||||||| |
|
|
| T |
12906266 |
agcttggagg |
12906257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 12948007 - 12947711
Alignment:
| Q |
18 |
ggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12948007 |
ggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttgtacattcaccaatttctctaggaatatcaccagatagatgattc |
12947908 |
T |
|
| Q |
118 |
tcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaag |
217 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
12947907 |
tcagagacatctaatgcttcaatattttttaacatacccacttctcttggtaagctaccactcaaagagttatgtgacaagttcaatatctttgataaag |
12947808 |
T |
|
| Q |
218 |
aaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
314 |
Q |
| |
|
|||||| |||||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12947807 |
aaaaaatatttaaaacttcaacaggtatggttcctctaagcttattatgagaaagataaagagattgtaaattttgacagtttcctatgcttggagg |
12947711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 5 - 314
Target Start/End: Complemental strand, 12898946 - 12898637
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
||||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
12898946 |
gagaagccaaagaggacggtattgttccgttgaaggagttcctttgcaaaagaatatattctatgcttgtacattcaccaatttctatcggaatatcacc |
12898847 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
204 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
12898846 |
agatagatgattcccagagacatctaatcctttaatattttttaacatacccacttctcttggtaaagtaccgctcaaagagttatgtgacaagttcaat |
12898747 |
T |
|
| Q |
205 |
aagattgataaagaaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttccta |
304 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||||| | |
|
|
| T |
12898746 |
aacattgataaagaaaaaagatttaaaacctctgcaggtatggttcctctaagcttattatgagaaagatctagatattgtaaatgtagacagtttccaa |
12898647 |
T |
|
| Q |
305 |
tgcttggagg |
314 |
Q |
| |
|
|||||||||| |
|
|
| T |
12898646 |
tgcttggagg |
12898637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 314
Target Start/End: Complemental strand, 12957454 - 12957148
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
||||||| || | ||||||||||||||| |||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
12957454 |
gagaagctaaagaggacggtattgttccattgaagatgttcctttgcaaacgaatatattctaagattgtacattcaccaatttctctcggaatatcacc |
12957355 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
204 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || | |
|
|
| T |
12957354 |
agatagatgattctcagagacatctaaatcttcaatattttttaacatacccacttctgttggtaaggtaccgctcaaagagttatgtgacaggt---ct |
12957258 |
T |
|
| Q |
205 |
aagattgataaagaaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttccta |
304 |
Q |
| |
|
|| | | |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
12957257 |
aatactaataatgaaaaaatatttaaaacctctacaggtatggttcctctaagcttattatgataaagatttagatattgtaaattttgacagtttccta |
12957158 |
T |
|
| Q |
305 |
tgcttggagg |
314 |
Q |
| |
|
|||||||||| |
|
|
| T |
12957157 |
tgcttggagg |
12957148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 10564390 - 10564094
Alignment:
| Q |
18 |
ggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattc |
117 |
Q |
| |
|
|||||||||||||| |||||||| ||||| |||||| || ||||||||||||||||||||| ||||||||| | |||||||||||||||| ||||||| |
|
|
| T |
10564390 |
ggacggtattgttctgttgaaggcgttcccttgcaacataagatattctaagcttatacattcgccaatttctgtaggaatatcaccagataaatgattc |
10564291 |
T |
|
| Q |
118 |
tcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaag |
217 |
Q |
| |
|
| ||||||||||||| ||||| ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
10564290 |
ttagagacatctaatatttcaagattttttaagacacccagttctcttggtaagctaccactcaaagagttatgtgacaagttcaataagtttgttaaag |
10564191 |
T |
|
| Q |
218 |
aaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
314 |
Q |
| |
|
|| ||||| | || ||||||| |||||||| ||| ||| ||||||| ||||||||| || ||||||||||||||| ||||||||||| ||||| |
|
|
| T |
10564190 |
aagaaagactaaaaacctctagaggtatggatccattaaatttattataagaaagatctagtacttgtaaattttgacaatttcctatgctaggagg |
10564094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 314
Target Start/End: Complemental strand, 10611086 - 10610777
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
||||||| || | ||| ||||||||||| ||||||||||| | ||||||| ||| |||||||| |||||||||||||||| | ||| |||| || | |
|
|
| T |
10611086 |
gagaagccaaagaggaaggtattgttccattgaaggagttaccttgcaaaagaaggtattctaaacttatacattcaccaactgttctaggaagataaga |
10610987 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
204 |
Q |
| |
|
|||||| ||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
10610986 |
agatagttgattctcagatacatctagcatattaatattttttagcatacccacttctcttggtaagctaccactcaaagagttatgcgacaagttcaat |
10610887 |
T |
|
| Q |
205 |
aagattgataaagaaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttccta |
304 |
Q |
| |
|
|| |||||||| |||||||||| || | ||||| |||||||| ||| ||||| ||||||||||||||||| || ||||||| |||||||| ||||||| |
|
|
| T |
10610886 |
aaatttgataaataaaaaagattaaaaatctctaaaggtatggatccactaagtttattatgagaaagatctaggtattgtaacttttgacaatttccta |
10610787 |
T |
|
| Q |
305 |
tgcttggagg |
314 |
Q |
| |
|
|||||||||| |
|
|
| T |
10610786 |
tgcttggagg |
10610777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 314
Target Start/End: Original strand, 10747848 - 10748157
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
||||||| || | ||| ||||||||||| ||||||||||||| ||||| |||| ||||||||| | | || ||||||||| | | ||||||||||| |
|
|
| T |
10747848 |
gagaagccaaagaggatggtattgttccattgaaggagttcccttgcaggtgaaggtattctaaggctgtgcaatcaccaattgttgtaggaatatcacc |
10747947 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaat |
204 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |
|
|
| T |
10747948 |
agatagatgattctcagagacatctagccaatcaatattttttagtaaacccacttctcttggtaagctaccactcaaaaagttatgtgataagttcaat |
10748047 |
T |
|
| Q |
205 |
aagattgataaagaaaaaagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttccta |
304 |
Q |
| |
|
||| ||||||||||||||| || || | |||| |||||||||||| ||||||||||||||||||||||| || ||||||| |||||||| ||| ||| |
|
|
| T |
10748048 |
aagtttgataaagaaaaaatatgaaaaatctctgaaggtatggttccactaagcttattatgagaaagatctaggtattgtaacttttgacaattttcta |
10748147 |
T |
|
| Q |
305 |
tgcttggagg |
314 |
Q |
| |
|
|||||||||| |
|
|
| T |
10748148 |
tgcttggagg |
10748157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 314
Target Start/End: Original strand, 10763983 - 10764274
Alignment:
| Q |
22 |
ggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcag |
121 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||| ||||||||| || | |||||||||||| | | |||||||||||||||||||||||||||| |
|
|
| T |
10763983 |
ggtattgttccgctgaaggagttcccttgcaattgaaggtattctaaggttgtgcattcaccaattgttttaggaatatcaccagatagatgattctcag |
10764082 |
T |
|
| Q |
122 |
agacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaa |
221 |
Q |
| |
|
| | ||| | |||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||| |||| |
|
|
| T |
10764083 |
atagatccagcatgtcaatattttttaacatacccacttctcttggtaagctaccactca--gttttatgtgacaagttcaatacaattgataaataaaa |
10764180 |
T |
|
| Q |
222 |
aag-atttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
314 |
Q |
| |
|
|| || || |||||||||||||||||||| |||||||| |||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
10764181 |
aaatatgaaaaacctctacaggtatggttccgctaagcttgttatcagaaagatcgagatattgtaacttttgacagtttcctatgctaggagg |
10764274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 10741549 - 10741833
Alignment:
| Q |
22 |
ggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcag |
121 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||| ||||||||| || | |||||||||||| ||| |||||||||||||||||| ||||||||| |
|
|
| T |
10741549 |
ggtattgttccgctgaaggagttcccttgcaattgaaggtattctaaggttgtgcattcaccaattgttctaggaatatcaccagatagacgattctcag |
10741648 |
T |
|
| Q |
122 |
agacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaa |
221 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||| ||||||||||| | |
|
|
| T |
10741649 |
atagatctagcatgtcaatattttttaacatacccacttctcttggtatgctaccactcaaagtgttatgtgacaagtccaataagtttgataaagaaga |
10741748 |
T |
|
| Q |
222 |
aagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatg |
306 |
Q |
| |
|
|||| | || ||||||| |||||||| ||| ||| ||||||| ||||||||| || ||||||||||||||| ||||||||| |
|
|
| T |
10741749 |
aagactaaaaacctctagaggtatggatccattaaatttattataagaaagatctagtacttgtaaattttgacaatttcctatg |
10741833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 138 - 314
Target Start/End: Original strand, 10717864 - 10718040
Alignment:
| Q |
138 |
aatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaacacctct |
237 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||| || |||||| |
|
|
| T |
10717864 |
aatattttttaacatactcacttctcttggtaagctaccactcaaagagttatgtgacaagtccaatatttttgataaataaaaaagattaaaaacctct |
10717963 |
T |
|
| Q |
238 |
acaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
314 |
Q |
| |
|
|||||||||||||| |||| | |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
10717964 |
acaggtatggttccactaaacctattatgagaaagatctagatattgtaaattttgacagtttcctatacttggagg |
10718040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 314
Target Start/End: Original strand, 10217599 - 10217888
Alignment:
| Q |
22 |
ggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcag |
121 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||| ||||| ||||||| ||||||||||| | |||||||||||| | |||| ||| |||| |
|
|
| T |
10217599 |
ggtattgttccattgaaggagttcccttgcaaatgaaggtattccaagcttacgcattcaccaatga---taggaatatcaccaaacagattattttcag |
10217695 |
T |
|
| Q |
122 |
agacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaa |
221 |
Q |
| |
|
| ||||||| | |||||||||||| ||| || ||||||||||| ||| |||| |||||| | ||||||||||| | |||||| |||||||| ||||| |
|
|
| T |
10217696 |
aaacatctagcttaccaatattttttagcatgccaacttctcttggcaagctaccgctcaaaaaattatgtgacaactccaataaaattgataaggaaaa |
10217795 |
T |
|
| Q |
222 |
aagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttggagg |
314 |
Q |
| |
|
|||||| || | ||||| |||||| |||||||||||||||| |||| |||| ||| |||||| || ||| |||||||||||||||||||| |
|
|
| T |
10217796 |
aagattaaaaatctctaagggtatgattcctctaagcttattttgagctagatttagatattgtagatgttggcagtttcctatgcttggagg |
10217888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 310
Target Start/End: Complemental strand, 7192364 - 7192076
Alignment:
| Q |
22 |
ggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcag |
121 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||| | |||||||||| ||| ||||| ||||| |||| ||||| |||||||||||| ||||||| | |
|
|
| T |
7192364 |
ggtatggttccgttgaaggagtttccttgcaaaaagaggtattctaagcgtatgcattcgccaatggctctaggaatgtcaccagatagaagattctccg |
7192265 |
T |
|
| Q |
122 |
agacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaa |
221 |
Q |
| |
|
||||||||| | | ||| |||||| |||||||||||||||||||| | |||||||||| ||||| ||||||||||| |||| ||||||| ||| | |
|
|
| T |
7192264 |
agacatctagcttgttgatactttttagcatacccacttctcttggtaggctaccactcaatgagtttcttgacaagttcagtaagtttgataacgaaga |
7192165 |
T |
|
| Q |
222 |
aagatttaacacctctacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttg |
310 |
Q |
| |
|
|||| | || || |||| ||||||||||||||||| || || || | ||| || || ||||||| |||| ||||||||||| |||| |
|
|
| T |
7192164 |
aagactgaaaacttctaagggtatggttcctctaagattgttttgtgcaaggtccaggtattgtaactttttgcagtttcctatacttg |
7192076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 10604128 - 10603951
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcacc |
104 |
Q |
| |
|
|||||||||| | ||| ||||||||||||||||| ||||||| ||||||| ||| |||||||||||||| ||||||||||| || ||||| || || |
|
|
| T |
10604128 |
gagaagcaaaagaggatggtattgttccgttgaatgagttcccttgcaaacgaaggtattctaagcttatgcattcaccaatagttccaggaatctcccc |
10604029 |
T |
|
| Q |
105 |
agatagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaa |
182 |
Q |
| |
|
| | | |||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||| |
|
|
| T |
10604028 |
acacaaatgattttcagagacatctaaccaatcaatattttttagcatacccacttcttttggtaagctaccactcaa |
10603951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 253
Target Start/End: Original strand, 10653034 - 10653280
Alignment:
| Q |
7 |
gaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccag |
106 |
Q |
| |
|
||||| || ||||| || || ||||||||||| ||||||| ||||||| || ||||||||| ||| ||||||||||| ||| ||||| ||||| | |
|
|
| T |
10653034 |
gaagccaatgtggatggaatggttccgttgaacgagttcccttgcaaagaaaggtattctaagactatgcattcaccaatggttctaggaatctcacctg |
10653133 |
T |
|
| Q |
107 |
atagatgattctcagagacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataa |
206 |
Q |
| |
|
|||||| ||| || |||| |||||| || | |||||| ||| ||||||||||||||| |||||| |||||||||| | ||||| |||||| |||| || |
|
|
| T |
10653134 |
atagataattatcggagatatctaactcattgatatttcttagcatacccacttctctcggtaagctaccactcaatgtgttatttgacaaattcagtat |
10653233 |
T |
|
| Q |
207 |
gattgataaagaaaaaagatttaacacctctacaggtatggttcctc |
253 |
Q |
| |
|
| ||| || || ||||| |||| ||||||| ||||||||||||| |
|
|
| T |
10653234 |
gtttgttagggaggaaagacttaaaacctctatgggtatggttcctc |
10653280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 10601214 - 10601054
Alignment:
| Q |
22 |
ggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcag |
121 |
Q |
| |
|
||||||||||||||||| || ||| ||||||||||| ||||||||||||| | |||||||||| || | ||| || ||| | | ||||||||||| |
|
|
| T |
10601214 |
ggtattgttccgttgaaagaattctcttgcaaatgaaggtattctaagcttacatattcaccaatggttccagtaatctccccacacaaatgattctcag |
10601115 |
T |
|
| Q |
122 |
agacatctaattcttcaatattttttaacatacccacttctcttggtaaggtaccactcaa |
182 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| ||| |||| |||| ||||| |
|
|
| T |
10601114 |
agacatctagccaatcaatattttttagcatacccacttcttttgttaagctacctctcaa |
10601054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 310
Target Start/End: Original strand, 19606730 - 19607003
Alignment:
| Q |
37 |
aaggagttcctttgcaaatgaatatattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattctt |
136 |
Q |
| |
|
|||||||||| ||| |||| || ||||||||||||||| ||||||||||| | | ||| | |||||| || ||||| |||||||||||||| | |
|
|
| T |
19606730 |
aaggagttcccttgaaaataaagatattctaagcttatgcattcaccaatggtttcagaaatgttaccagaaagttgattgtcagagacatctaaggtat |
19606829 |
T |
|
| Q |
137 |
caatattttttaacatacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaacacctc |
236 |
Q |
| |
|
| || || ||| ||||| |||||| | |||||| | ||||| || ||||| | |||||| | || ||| ||||||||||| ||||| || ||||| |
|
|
| T |
19606830 |
ctattgttgttagcatactgacttctttcggtaagttgccactgaatgagttttttgacaaatccagtaatattgataaagaggaaagacgaaaaacctc |
19606929 |
T |
|
| Q |
237 |
tacaggtatggttcctctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttg |
310 |
Q |
| |
|
|| ||||||||||| ||||| ||||| ||| |||| | | |||||||| |||||||||||||||||||||| |
|
|
| T |
19606930 |
taagggtatggttccactaagattattttgaaaaaggactatggattgtaacttttgacagtttcctatgcttg |
19607003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 310
Target Start/End: Original strand, 10661065 - 10661223
Alignment:
| Q |
152 |
tacccacttctcttggtaaggtaccactcaaagagttatgtgacaagttcaataagattgataaagaaaaaagatttaacacctctacaggtatggttcc |
251 |
Q |
| |
|
||||||||||| |||||| | |||||||||| ||||| | ||||||||||| |||| ||| |||||| ||||| | || |||| | ||||||||||| |
|
|
| T |
10661065 |
tacccacttctattggtaggctaccactcaatgagttttttgacaagttcagtaagtttgttaaagaggaaagactaaagacctttttgggtatggttcc |
10661164 |
T |
|
| Q |
252 |
tctaagcttattatgagaaagatcaagagattgtaaattttgacagtttcctatgcttg |
310 |
Q |
| |
|
|||||| | || || ||||| || || ||||||| ||||| || | ||||||||||| |
|
|
| T |
10661165 |
tctaagaatgttttgtgaaaggtctagggattgtagcttttggcaatgtcctatgcttg |
10661223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 10717773 - 10717854
Alignment:
| Q |
5 |
gagaagcaaaggtggacggtattgttccgttgaaggagttcctttgcaaatgaatatattctaagcttatacattcaccaat |
86 |
Q |
| |
|
||||||| || | ||| ||||||||||| |||| |||||||| || |||||||| |||||| ||||| || ||||||||||| |
|
|
| T |
10717773 |
gagaagccaaagaggatggtattgttccattgatggagttcccttccaaatgaagatattccaagctcatgcattcaccaat |
10717854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 9837217 - 9837317
Alignment:
| Q |
61 |
tattctaagcttatacattcaccaatttctctcggaatatcaccagatagatgattctcagagacatctaattcttcaatattttttaacatacccactt |
160 |
Q |
| |
|
|||||||| ||||| |||||||||||| | | ||||| ||||| || |||||||| ||||||||||||| | | ||||||||||| || |||||||| |
|
|
| T |
9837217 |
tattctaaacttatgcattcaccaattgttattggaatgtcacccgacagatgattttcagagacatctagcttatgaatattttttagcaaacccactt |
9837316 |
T |
|
| Q |
161 |
c |
161 |
Q |
| |
|
| |
|
|
| T |
9837317 |
c |
9837317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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