View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17793_low_76 (Length: 285)

Name: NF17793_low_76
Description: NF17793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17793_low_76
NF17793_low_76
[»] chr3 (69 HSPs)
chr3 (8-98)||(30510185-30510275)
chr3 (5-95)||(36720384-36720474)
chr3 (20-95)||(47454615-47454690)
chr3 (5-91)||(2667869-2667955)
chr3 (19-95)||(2597217-2597293)
chr3 (2-98)||(53473365-53473461)
chr3 (18-95)||(10499105-10499182)
chr3 (6-95)||(31520589-31520678)
chr3 (5-78)||(32651421-32651494)
chr3 (6-95)||(37788449-37788538)
chr3 (6-95)||(53412948-53413037)
chr3 (5-57)||(52769966-52770018)
chr3 (4-91)||(32638952-32639039)
chr3 (7-94)||(45308887-45308974)
chr3 (5-95)||(8051217-8051307)
chr3 (5-95)||(14186651-14186740)
chr3 (18-91)||(4844507-4844580)
chr3 (18-91)||(4870203-4870276)
chr3 (18-91)||(21960558-21960631)
chr3 (6-95)||(51903862-51903951)
chr3 (17-73)||(10445134-10445190)
chr3 (6-98)||(13808869-13808961)
chr3 (23-90)||(12761520-12761587)
chr3 (5-95)||(4222144-4222234)
chr3 (6-91)||(8075111-8075196)
chr3 (6-95)||(27093345-27093434)
chr3 (6-75)||(40063642-40063711)
chr3 (22-95)||(53956387-53956460)
chr3 (6-74)||(27259185-27259253)
chr3 (4-95)||(16354874-16354965)
chr3 (7-81)||(14339627-14339701)
chr3 (6-56)||(20501738-20501788)
chr3 (6-95)||(28703388-28703477)
chr3 (17-82)||(29563916-29563981)
chr3 (6-95)||(30311309-30311398)
chr3 (6-71)||(44743839-44743904)
chr3 (6-95)||(53863852-53863940)
chr3 (6-57)||(3427537-3427588)
chr3 (20-95)||(5499405-5499480)
chr3 (48-95)||(10682969-10683016)
chr3 (20-98)||(17034988-17035064)
chr3 (44-95)||(18316520-18316571)
chr3 (20-95)||(31510716-31510791)
chr3 (6-57)||(33899655-33899706)
chr3 (20-95)||(40268492-40268566)
chr3 (44-95)||(42799769-42799820)
chr3 (20-75)||(43902360-43902415)
chr3 (20-95)||(54990706-54990780)
chr3 (5-95)||(8390640-8390730)
chr3 (4-74)||(11090147-11090217)
chr3 (24-90)||(11612307-11612373)
chr3 (22-100)||(16212972-16213050)
chr3 (17-95)||(46518631-46518709)
chr3 (6-91)||(8170679-8170764)
chr3 (18-91)||(16991549-16991622)
chr3 (42-91)||(17554778-17554827)
chr3 (6-75)||(19154654-19154723)
chr3 (6-75)||(28531042-28531111)
chr3 (18-95)||(30232333-30232410)
chr3 (6-95)||(31788955-31789043)
chr3 (22-95)||(34844374-34844446)
chr3 (6-95)||(40777017-40777104)
chr3 (20-81)||(47236969-47237030)
chr3 (23-76)||(47279405-47279458)
chr3 (18-95)||(47810740-47810817)
chr3 (17-57)||(8796088-8796128)
chr3 (20-72)||(16900679-16900731)
chr3 (20-80)||(19716215-19716275)
chr3 (17-57)||(36010783-36010823)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-95)||(15319-15396)
[»] chr6 (40 HSPs)
chr6 (18-95)||(33549107-33549184)
chr6 (6-95)||(12188287-12188376)
chr6 (5-95)||(12234490-12234580)
chr6 (9-94)||(10338161-10338246)
chr6 (5-78)||(28841434-28841507)
chr6 (6-95)||(31622975-31623064)
chr6 (6-94)||(6776591-6776679)
chr6 (7-91)||(21418477-21418561)
chr6 (5-95)||(6758405-6758495)
chr6 (21-95)||(30127403-30127477)
chr6 (6-98)||(4105048-4105143)
chr6 (20-95)||(14557965-14558040)
chr6 (1-95)||(32613119-32613213)
chr6 (5-78)||(3715472-3715545)
chr6 (18-79)||(6385881-6385942)
chr6 (5-89)||(12216753-12216837)
chr6 (6-78)||(20213061-20213133)
chr6 (6-78)||(22107084-22107156)
chr6 (4-95)||(12633012-12633103)
chr6 (47-98)||(13441050-13441101)
chr6 (20-95)||(33560382-33560457)
chr6 (4-78)||(346551-346624)
chr6 (6-92)||(11423572-11423658)
chr6 (18-95)||(13227154-13227231)
chr6 (6-91)||(14199931-14200016)
chr6 (18-75)||(34786450-34786507)
chr6 (20-92)||(34444809-34444881)
chr6 (9-60)||(9626070-9626121)
chr6 (5-80)||(32201868-32201943)
chr6 (6-80)||(20863393-20863467)
chr6 (5-39)||(24256805-24256839)
chr6 (65-94)||(11854726-11854755)
chr6 (19-76)||(13113958-13114015)
chr6 (17-102)||(15951297-15951382)
chr6 (5-74)||(16405109-16405178)
chr6 (17-94)||(24617083-24617159)
chr6 (18-98)||(6691547-6691626)
chr6 (6-98)||(8268638-8268730)
chr6 (20-80)||(24641188-24641248)
chr6 (6-78)||(28363957-28364029)
[»] chr4 (66 HSPs)
chr4 (5-93)||(21660127-21660215)
chr4 (5-93)||(21668891-21668979)
chr4 (1-95)||(51948483-51948577)
chr4 (5-94)||(13901746-13901835)
chr4 (5-95)||(4185096-4185186)
chr4 (6-95)||(7292782-7292871)
chr4 (6-95)||(8306488-8306577)
chr4 (6-95)||(37109335-37109424)
chr4 (5-76)||(7949437-7949508)
chr4 (6-95)||(8030188-8030277)
chr4 (6-95)||(28635699-28635788)
chr4 (6-74)||(23377980-23378048)
chr4 (18-94)||(24234649-24234725)
chr4 (20-100)||(55427198-55427278)
chr4 (20-95)||(19238575-19238650)
chr4 (5-95)||(39509073-39509163)
chr4 (6-96)||(49576878-49576968)
chr4 (5-78)||(13015447-13015520)
chr4 (6-95)||(29195098-29195186)
chr4 (4-95)||(27965485-27965583)
chr4 (26-80)||(17618299-17618353)
chr4 (21-95)||(31759657-31759731)
chr4 (6-72)||(32992638-32992704)
chr4 (6-95)||(31826612-31826701)
chr4 (22-95)||(51250522-51250595)
chr4 (5-73)||(2622378-2622446)
chr4 (6-94)||(37980132-37980219)
chr4 (6-78)||(38869788-38869860)
chr4 (20-95)||(37720212-37720287)
chr4 (20-95)||(46295100-46295175)
chr4 (19-97)||(30557267-30557344)
chr4 (20-78)||(30938217-30938275)
chr4 (5-95)||(46545714-46545804)
chr4 (8-98)||(52254390-52254480)
chr4 (45-94)||(4911255-4911304)
chr4 (6-95)||(5795393-5795482)
chr4 (6-95)||(8325363-8325452)
chr4 (4-73)||(37274441-37274510)
chr4 (5-94)||(43623427-43623516)
chr4 (17-77)||(19531997-19532057)
chr4 (19-95)||(33619209-33619285)
chr4 (5-93)||(33755968-33756056)
chr4 (5-57)||(40285664-40285716)
chr4 (1-57)||(41047518-41047573)
chr4 (20-91)||(19229206-19229276)
chr4 (4-95)||(19680770-19680861)
chr4 (20-95)||(20608925-20609000)
chr4 (20-95)||(47044720-47044795)
chr4 (5-56)||(47386774-47386825)
chr4 (36-82)||(4688579-4688625)
chr4 (25-95)||(9241028-9241098)
chr4 (17-95)||(12798687-12798765)
chr4 (6-56)||(15729524-15729574)
chr4 (5-95)||(21344820-21344909)
chr4 (21-95)||(41346962-41347036)
chr4 (6-51)||(9693482-9693527)
chr4 (17-78)||(10048000-10048061)
chr4 (20-77)||(19112929-19112986)
chr4 (5-78)||(49262667-49262740)
chr4 (6-78)||(4249197-4249269)
chr4 (4-76)||(13265090-13265162)
chr4 (6-78)||(16581713-16581785)
chr4 (5-95)||(37443705-37443792)
chr4 (44-96)||(39030135-39030187)
chr4 (6-62)||(51622521-51622577)
chr4 (20-100)||(56409949-56410028)
[»] chr1 (75 HSPs)
chr1 (1-95)||(2219975-2220069)
chr1 (6-95)||(40257402-40257491)
chr1 (5-94)||(17745239-17745328)
chr1 (21-93)||(37400279-37400351)
chr1 (20-102)||(19528325-19528407)
chr1 (6-95)||(15786304-15786393)
chr1 (5-94)||(24047085-24047174)
chr1 (6-95)||(44961768-44961857)
chr1 (19-79)||(31383795-31383855)
chr1 (4-95)||(33700755-33700846)
chr1 (25-95)||(1690080-1690150)
chr1 (1-91)||(11068822-11068912)
chr1 (5-95)||(19940855-19940945)
chr1 (4-58)||(40814390-40814444)
chr1 (5-95)||(44126398-44126488)
chr1 (6-91)||(6122801-6122886)
chr1 (6-95)||(9165179-9165268)
chr1 (6-95)||(31794248-31794337)
chr1 (34-98)||(26232398-26232462)
chr1 (17-77)||(27476766-27476826)
chr1 (6-78)||(52336758-52336830)
chr1 (4-95)||(4566551-4566642)
chr1 (4-95)||(30689015-30689106)
chr1 (5-95)||(50901584-50901674)
chr1 (17-95)||(36371473-36371551)
chr1 (6-91)||(10526830-10526915)
chr1 (6-91)||(11063563-11063648)
chr1 (6-95)||(16893397-16893486)
chr1 (5-78)||(25494052-25494125)
chr1 (6-78)||(2799882-2799954)
chr1 (6-78)||(8177166-8177238)
chr1 (18-94)||(9224779-9224855)
chr1 (5-57)||(17439958-17440010)
chr1 (17-93)||(21547475-21547551)
chr1 (7-91)||(52116766-52116850)
chr1 (44-95)||(37046988-37047039)
chr1 (4-91)||(51703786-51703873)
chr1 (20-79)||(52029935-52029994)
chr1 (5-95)||(1094528-1094618)
chr1 (20-94)||(4824975-4825049)
chr1 (6-56)||(8904456-8904506)
chr1 (3-69)||(12370192-12370258)
chr1 (34-95)||(18459243-18459305)
chr1 (28-78)||(36124853-36124903)
chr1 (5-78)||(6650615-6650688)
chr1 (18-83)||(12587285-12587350)
chr1 (18-95)||(18037609-18037686)
chr1 (21-100)||(21694444-21694520)
chr1 (5-74)||(31049637-31049706)
chr1 (20-77)||(31605846-31605903)
chr1 (18-95)||(51814497-51814574)
chr1 (21-77)||(9117140-9117196)
chr1 (20-100)||(16169976-16170056)
chr1 (20-96)||(17410233-17410309)
chr1 (1-81)||(28411347-28411427)
chr1 (4-80)||(42983356-42983432)
chr1 (31-95)||(45235388-45235452)
chr1 (42-98)||(47720830-47720886)
chr1 (42-98)||(47727822-47727878)
chr1 (6-78)||(50919974-50920046)
chr1 (20-95)||(952514-952589)
chr1 (6-57)||(1600276-1600327)
chr1 (5-68)||(3799936-3799999)
chr1 (44-95)||(15581163-15581214)
chr1 (13-56)||(26232352-26232395)
chr1 (5-56)||(28283573-28283624)
chr1 (4-62)||(42949274-42949332)
chr1 (23-52)||(1205426-1205455)
chr1 (20-57)||(12259301-12259338)
chr1 (25-78)||(21184391-21184444)
chr1 (35-88)||(28022138-28022191)
chr1 (20-77)||(43445984-43446041)
chr1 (17-57)||(3265965-3266005)
chr1 (5-97)||(6948060-6948152)
chr1 (5-93)||(12662287-12662375)
[»] chr5 (33 HSPs)
chr5 (6-95)||(21549121-21549210)
chr5 (6-95)||(30883182-30883271)
chr5 (17-95)||(16773810-16773888)
chr5 (22-95)||(30109308-30109381)
chr5 (6-95)||(25627060-25627149)
chr5 (6-95)||(34984809-34984898)
chr5 (5-95)||(21589291-21589381)
chr5 (5-95)||(29075784-29075874)
chr5 (18-95)||(8278271-8278348)
chr5 (7-91)||(1410645-1410728)
chr5 (6-78)||(37258350-37258422)
chr5 (20-95)||(16457813-16457888)
chr5 (5-95)||(17028247-17028337)
chr5 (6-95)||(14285164-14285253)
chr5 (18-91)||(14495801-14495874)
chr5 (6-95)||(18595985-18596074)
chr5 (5-78)||(22020845-22020918)
chr5 (6-78)||(43442216-43442288)
chr5 (19-94)||(43241679-43241754)
chr5 (5-59)||(29173529-29173583)
chr5 (5-59)||(29210397-29210451)
chr5 (6-55)||(1279034-1279083)
chr5 (6-95)||(7918453-7918542)
chr5 (6-95)||(26078035-26078124)
chr5 (18-94)||(12883844-12883920)
chr5 (20-71)||(84851-84902)
chr5 (20-95)||(16172982-16173056)
chr5 (23-94)||(16436622-16436692)
chr5 (16-95)||(36958116-36958195)
chr5 (17-95)||(22737085-22737163)
chr5 (21-78)||(4963983-4964040)
chr5 (42-91)||(29692406-29692455)
chr5 (5-53)||(12669517-12669565)
[»] chr7 (78 HSPs)
chr7 (13-100)||(23301593-23301680)
chr7 (6-96)||(15905658-15905747)
chr7 (17-95)||(43215187-43215265)
chr7 (18-95)||(2446311-2446388)
chr7 (6-95)||(26459394-26459483)
chr7 (20-95)||(22760866-22760941)
chr7 (5-95)||(23552121-23552211)
chr7 (20-100)||(20335829-20335909)
chr7 (4-88)||(45229007-45229091)
chr7 (23-95)||(48771941-48772013)
chr7 (20-98)||(18884403-18884481)
chr7 (5-95)||(30579338-30579428)
chr7 (6-95)||(15137556-15137645)
chr7 (6-95)||(17040996-17041085)
chr7 (6-95)||(39631847-39631936)
chr7 (6-78)||(7721389-7721461)
chr7 (4-48)||(41975937-41975981)
chr7 (7-91)||(43590914-43590998)
chr7 (5-72)||(5934147-5934214)
chr7 (5-60)||(37473652-37473707)
chr7 (27-98)||(45976928-45976999)
chr7 (4-57)||(7309397-7309449)
chr7 (6-83)||(9608613-9608690)
chr7 (6-83)||(9836185-9836262)
chr7 (6-95)||(25590614-25590703)
chr7 (6-95)||(33869429-33869518)
chr7 (5-94)||(42711962-42712051)
chr7 (6-78)||(33222390-33222462)
chr7 (5-93)||(41519248-41519335)
chr7 (18-98)||(43663091-43663171)
chr7 (43-95)||(48125195-48125247)
chr7 (32-95)||(5579244-5579307)
chr7 (6-81)||(11720944-11721019)
chr7 (20-95)||(18056773-18056848)
chr7 (20-79)||(25132376-25132435)
chr7 (6-101)||(31835189-31835284)
chr7 (5-95)||(33460405-33460496)
chr7 (5-95)||(39499704-39499792)
chr7 (20-78)||(21877828-21877886)
chr7 (27-93)||(28236586-28236652)
chr7 (14-95)||(18363699-18363780)
chr7 (6-95)||(24513800-24513889)
chr7 (42-95)||(25021355-25021408)
chr7 (12-52)||(9122138-9122178)
chr7 (20-92)||(19553460-19553531)
chr7 (42-98)||(20952169-20952225)
chr7 (4-72)||(22035424-22035492)
chr7 (42-94)||(23595733-23595785)
chr7 (5-53)||(23945906-23945954)
chr7 (19-95)||(30442491-30442567)
chr7 (18-77)||(5668567-5668626)
chr7 (21-80)||(8108599-8108658)
chr7 (23-98)||(11765036-11765111)
chr7 (5-80)||(21558146-21558221)
chr7 (8-55)||(30217922-30217969)
chr7 (20-95)||(38374597-38374672)
chr7 (5-91)||(5830586-5830672)
chr7 (25-95)||(7801183-7801253)
chr7 (17-75)||(17113818-17113876)
chr7 (6-56)||(21570016-21570066)
chr7 (5-95)||(38917098-38917186)
chr7 (6-100)||(48039631-48039725)
chr7 (5-62)||(2882986-2883043)
chr7 (5-98)||(4566411-4566504)
chr7 (42-95)||(5273610-5273663)
chr7 (1-78)||(24438226-24438303)
chr7 (21-98)||(25241996-25242073)
chr7 (6-95)||(29385727-29385816)
chr7 (6-91)||(33181194-33181279)
chr7 (42-95)||(42836021-42836074)
chr7 (22-95)||(44628183-44628256)
chr7 (18-91)||(45709704-45709777)
chr7 (31-95)||(3280494-3280558)
chr7 (47-95)||(22932736-22932784)
chr7 (6-78)||(29785285-29785357)
chr7 (20-80)||(37085547-37085607)
chr7 (21-95)||(41487365-41487436)
chr7 (20-56)||(49050489-49050525)
[»] chr2 (56 HSPs)
chr2 (4-95)||(7799017-7799108)
chr2 (20-90)||(21213777-21213847)
chr2 (4-91)||(8162047-8162134)
chr2 (20-95)||(19016034-19016109)
chr2 (5-95)||(35710394-35710484)
chr2 (19-95)||(42327392-42327468)
chr2 (5-56)||(33582015-33582066)
chr2 (20-95)||(37480078-37480153)
chr2 (20-95)||(39714995-39715070)
chr2 (22-92)||(12994376-12994446)
chr2 (17-94)||(3001383-3001460)
chr2 (6-103)||(7667453-7667550)
chr2 (6-95)||(19322771-19322860)
chr2 (6-95)||(40416374-40416463)
chr2 (6-54)||(13519036-13519084)
chr2 (6-78)||(30410533-30410605)
chr2 (20-95)||(29503274-29503349)
chr2 (4-99)||(41504918-41505012)
chr2 (22-81)||(42860365-42860424)
chr2 (17-91)||(13803502-13803576)
chr2 (13-95)||(23052514-23052596)
chr2 (4-94)||(24191842-24191932)
chr2 (21-95)||(29197375-29197449)
chr2 (25-95)||(37755974-37756044)
chr2 (6-95)||(42922417-42922507)
chr2 (5-78)||(11251107-11251180)
chr2 (6-95)||(19244112-19244201)
chr2 (6-91)||(21195660-21195745)
chr2 (21-98)||(32687481-32687558)
chr2 (19-95)||(26545843-26545919)
chr2 (23-95)||(28846694-28846766)
chr2 (23-95)||(41908639-41908711)
chr2 (6-95)||(1435067-1435155)
chr2 (6-95)||(1729819-1729908)
chr2 (6-95)||(4060198-4060287)
chr2 (19-80)||(7599978-7600039)
chr2 (6-95)||(11062363-11062452)
chr2 (6-95)||(30359657-30359745)
chr2 (18-95)||(42602557-42602634)
chr2 (4-80)||(3677335-3677411)
chr2 (18-74)||(4262298-4262354)
chr2 (6-78)||(17737608-17737680)
chr2 (23-95)||(18825344-18825415)
chr2 (19-95)||(30808644-30808720)
chr2 (44-95)||(3697421-3697472)
chr2 (22-81)||(12086129-12086188)
chr2 (20-95)||(26482096-26482170)
chr2 (19-82)||(31573638-31573701)
chr2 (20-94)||(4683211-4683285)
chr2 (17-95)||(16918573-16918651)
chr2 (5-43)||(39764988-39765026)
chr2 (6-55)||(2750610-2750659)
chr2 (6-95)||(14500280-14500369)
chr2 (8-81)||(18259747-18259820)
chr2 (6-59)||(45026782-45026835)
chr2 (4-56)||(3660990-3661042)
[»] scaffold0074 (1 HSPs)
scaffold0074 (5-75)||(45742-45812)
[»] chr8 (54 HSPs)
chr8 (5-95)||(16852343-16852433)
chr8 (18-95)||(968365-968442)
chr8 (7-95)||(19703472-19703560)
chr8 (5-78)||(6536540-6536613)
chr8 (19-100)||(29431009-29431090)
chr8 (6-101)||(26688862-26688957)
chr8 (20-95)||(28783063-28783138)
chr8 (4-87)||(40791877-40791960)
chr8 (5-95)||(8485002-8485092)
chr8 (5-95)||(23361632-23361722)
chr8 (18-95)||(3624583-3624660)
chr8 (6-91)||(11819783-11819868)
chr8 (6-95)||(18540301-18540390)
chr8 (6-91)||(27750737-27750822)
chr8 (22-95)||(29858049-29858122)
chr8 (4-101)||(34986099-34986191)
chr8 (18-95)||(35641897-35641974)
chr8 (6-95)||(44780098-44780187)
chr8 (17-95)||(6436550-6436628)
chr8 (4-78)||(35690046-35690120)
chr8 (20-98)||(36205195-36205273)
chr8 (5-95)||(43968981-43969071)
chr8 (6-95)||(6569755-6569844)
chr8 (4-89)||(12281503-12281588)
chr8 (2-95)||(31087238-31087331)
chr8 (6-74)||(43594302-43594370)
chr8 (32-95)||(2203495-2203558)
chr8 (24-95)||(5801050-5801121)
chr8 (44-95)||(6530810-6530861)
chr8 (23-98)||(34966851-34966926)
chr8 (6-76)||(11492057-11492127)
chr8 (6-95)||(33017217-33017306)
chr8 (6-55)||(33727857-33727906)
chr8 (4-80)||(15948031-15948107)
chr8 (4-56)||(31408104-31408156)
chr8 (34-94)||(33692315-33692374)
chr8 (32-95)||(5264547-5264610)
chr8 (18-81)||(7140726-7140789)
chr8 (20-103)||(18546360-18546443)
chr8 (4-78)||(8794327-8794401)
chr8 (21-95)||(11793520-11793594)
chr8 (25-91)||(18030187-18030253)
chr8 (21-95)||(18897169-18897243)
chr8 (5-95)||(23874366-23874455)
chr8 (1-103)||(30483863-30483965)
chr8 (6-95)||(12988431-12988520)
chr8 (43-100)||(20994479-20994536)
chr8 (18-95)||(22268930-22269006)
chr8 (19-56)||(24351725-24351762)
chr8 (13-98)||(28560607-28560691)
chr8 (18-95)||(35287719-35287796)
chr8 (19-91)||(3058046-3058118)
chr8 (19-95)||(3826774-3826850)
chr8 (7-95)||(36042984-36043072)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-98)||(38881-38978)
[»] scaffold0517 (1 HSPs)
scaffold0517 (21-93)||(7725-7797)
[»] scaffold0299 (1 HSPs)
scaffold0299 (6-81)||(11545-11620)
[»] scaffold0009 (2 HSPs)
scaffold0009 (21-77)||(19846-19902)
scaffold0009 (22-74)||(145913-145965)
[»] scaffold1367 (1 HSPs)
scaffold1367 (14-81)||(832-899)
[»] scaffold0002 (1 HSPs)
scaffold0002 (4-95)||(94953-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (18-80)||(13042-13104)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-78)||(25326-25403)
[»] scaffold0118 (1 HSPs)
scaffold0118 (6-95)||(41617-41706)
[»] scaffold0180 (1 HSPs)
scaffold0180 (6-78)||(19946-20018)
[»] scaffold0221 (1 HSPs)
scaffold0221 (20-95)||(2907-2982)
[»] scaffold0032 (1 HSPs)
scaffold0032 (5-100)||(112280-112375)
[»] scaffold0101 (1 HSPs)
scaffold0101 (6-80)||(43316-43390)
[»] scaffold0291 (1 HSPs)
scaffold0291 (20-91)||(2468-2539)
[»] scaffold0368 (1 HSPs)
scaffold0368 (4-62)||(14947-15005)
[»] scaffold0021 (2 HSPs)
scaffold0021 (6-80)||(106066-106140)
scaffold0021 (35-91)||(157000-157056)
[»] scaffold0006 (1 HSPs)
scaffold0006 (5-91)||(162992-163078)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-91)||(320049-320135)
[»] scaffold0955 (1 HSPs)
scaffold0955 (1-98)||(3463-3559)
[»] scaffold0238 (1 HSPs)
scaffold0238 (6-59)||(2695-2748)
[»] scaffold0198 (1 HSPs)
scaffold0198 (18-79)||(10812-10872)
[»] scaffold0172 (1 HSPs)
scaffold0172 (20-81)||(15775-15836)
[»] scaffold0063 (1 HSPs)
scaffold0063 (17-78)||(35384-35445)
[»] scaffold0300 (1 HSPs)
scaffold0300 (6-78)||(4360-4432)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-56)||(49348-49400)


Alignment Details
Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 30510185 - 30510275
Alignment:
Q  8 attgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  30510185 attgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtggatt 30510275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 36720474 - 36720384
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |  || |||||||||||||||||| ||||||||||||    
T  36720474 taaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgg 36720384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 47454615 - 47454690
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||| |||||||||||||||| || || |||||||||||||| ||||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgg 47454690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 2667955 - 2667869
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||||| |||||||| ||||||||| |||| ||||||||||| || || |||||||||||||||||  ||||||||    
T  2667955 taaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 2597217 - 2597293
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||| |||||| ||||||||||||||||||||||||||||  ||  ||||||||||||||||| ||||||||||||    
T  2597217 agagattcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgg 2597293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 53473461 - 53473365
Alignment:
Q  2 atttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||||| |||||||||| |||| ||| |||||||||||||| | | |||||| || |||| |||||||||||| |||| |||||||||||    
T  53473461 atttaaattgacattagagagaattgaacatgatacctcaaggaggagtaaaatcctagatctcaagtcaataccaccaggacaaaccaagtggatt 53473365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10499105 - 10499182
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| |||||||||||||| ||||| ||||| || || |||||||||||||||||  ||||||||||||    
T  10499105 gagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgg 10499182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 31520589 - 31520678
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||| ||| | ||||||| |||||||||||||||| || || ||||||||| |||||||  ||||||||||||    
T  31520589 aaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgg 31520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 32651421 - 32651494
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||||||||||||||||  ||||| ||  |||||||||||||||| ||||| ||||||||||||||    
T  32651421 taaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccac 32651494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 37788449 - 37788538
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||||||||||||||||| ||||||||  |||||||||||||||||||||  |||| |||||||||  |  ||||||||||||    
T  37788449 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgg 37788538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 53413037 - 53412948
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| ||||||||| |||| ||||||||  |||||||||||||||| ||||  |||||||||||||| ||| ||||||||||||    
T  53413037 aaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 52769966 - 52770018
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  52769966 taaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcc 52770018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 32639039 - 32638952
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||| |||| |||||||| ||||||||| | || || |||||||| || |  |||||||||||||||||||||||||||    
T  32639039 ttaaattgacactggagaaaatcgaacctgagacctcgaagatgaacacactcccagtttccaagccaataccaccagaacaacccaa 32638952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 45308887 - 45308974
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||  ||| |||||||| ||||||||| |||||||||| ||||  | ||| ||| ||||||||||||||||||||||||||    
T  45308887 aattgacactgaagataatcgaacctgagacctcgaggaggagcatactcacaagtcccaaaccaataccaccagaacaacccaagtg 45308974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8051307 - 8051217
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||  ||| ||||||||||||||||||| ||||| |||| ||| | ||||| |||||||||||||||||  ||||||||||||    
T  8051307 taaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgg 8051217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 14186740 - 14186651
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||  ||||||||||||| ||||||||  |||||||||||||||| ||||| |||| ||||||||| ||  ||||||||||||    
T  14186740 taaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgg 14186651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 4844507 - 4844580
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||| | ||||||||| |||||||||||||||| || || |||| ||||||||||||| ||||||||    
T  4844507 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 4870203 - 4870276
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||| | ||||||||| |||||||||||||||| || || |||| ||||||||||||| ||||||||    
T  4870203 gagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 21960631 - 21960558
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||  ||||||||| |||||||||||||||  ||||| |||||||||||||||||  ||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaa 21960558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 51903862 - 51903951
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||  ||||||||||||| ||||||| | |||||||||||||||| || || ||||||||||||| |||  ||||||| ||||    
T  51903862 aaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgg 51903951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 10445134 - 10445190
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaat 73  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||    
T  10445134 agagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 13808869 - 13808961
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||| |||||||||| |||| ||||||||  |||||||||||||| | || || |||| |||||  |||||| |||||||||||||||    
T  13808869 aaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtggatt 13808961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 12761587 - 12761520
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaaccca 90  Q
    |||||||| ||||| ||||||||||| |||||||| ||||| |||| ||||||||||||| |||||||    
T  12761587 aatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 4222234 - 4222144
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| |||||||||||||| | |||| |  |||||||||||||||| || || |||||||||||||| |   ||||||||||||    
T  4222234 taaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgg 4222144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 8075111 - 8075196
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||| ||||||||| ||| ||||  |||||||||||||||| | ||| |||||| ||||||| ||  ||||||||    
T  8075111 aaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 27093345 - 27093434
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||| ||| ||||||||  |||||||||||||||| | ||  |||||||||||||| ||  ||||||||||||    
T  27093345 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgg 27093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 40063711 - 40063642
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    |||||| |||| |||||||||||||||||||||| ||||||||||| ||||  || || |||||||||||    
T  40063711 aaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatac 40063642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 53956460 - 53956387
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| |||||||||||| ||| |||||||||  |||| ||||||||| ||| ||| |||||||||||||    
T  53956460 gaatcgaacatgagacctcaagaaggggcacactcccgggtcccaagccaatgccatcaggacaacccaagtgg 53956387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 27259253 - 27259185
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    |||||||||  |||||||||| ||| ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  27259253 aaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 16354874 - 16354965
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| ||| ||| |||||||||||||| |||||||   |||||||||||||||  ||||  |||||||||||||| ||  ||||||||||||    
T  16354874 ttaatttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgg 16354965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 14339701 - 14339627
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||| |||||| ||||||||||| |||||| |  |||||||||||||||| |  || |||||||||||||||||    
T  14339701 aattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccag 14339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 20501788 - 20501738
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    |||||| |||| ||||||||||||| |||||||| ||||||||||||||||    
T  20501788 aaattggcactggagagaatcgaacctgagaccttaaggaggagcacactc 20501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 28703388 - 28703477
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  | |||||||||||||| || || ||||| |||| |||  || ||||||||||||    
T  28703388 aaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgg 28703477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 29563981 - 29563916
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccaga 82  Q
    |||||||||||||| |||||| || ||||| |||||||| | || || ||||||||||||||||||    
T  29563981 agagagaatcgaacctgagacttcgaggagaagcacacttccagatctcaagccaataccaccaga 29563916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 30311398 - 30311309
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| | |||||||||||| ||||||||  |||||||||||||||| || || |||||| ||||||| ||  ||||||| ||||    
T  30311398 aaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgg 30311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 44743839 - 44743904
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagcca 71  Q
    |||||| |||| |||| |||||||| ||||||||| |||||||||||||||| || || |||||||    
T  44743839 aaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 53863852 - 53863940
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| ||||||||| |||| | ||||||  || ||||||||||||| ||||| |||||||| | |||||| |||||||||||||    
T  53863852 aaattggcaccagagagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggacaacccaagtgg 53863940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 3427537 - 3427588
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||| |||||||||||||||||  ||||||||  ||||||||||||||||    
T  3427537 aaattggcactagagagaatcgaatctgagaccttgaggaggagcacactcc 3427588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 5499405 - 5499480
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| | |||||| ||||||||||||||||  || || |||| ||||||||||||  ||||||||||||    
T  5499405 gagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgg 5499480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 10682969 - 10683016
Alignment:
Q  48 agcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||||| |||||||||||||| ||| ||||||||||||    
T  10682969 agcacactccaaggtctcaagccaataccactagatcaacccaagtgg 10683016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 17035064 - 17034988
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||| ||||||||  |||| |||||| |||  || || |||| ||||||||||||| |||||||||||||||    
T  17035064 gagaatcgaacctgagaccttgaggatgagcactctc--agatcccaagtcaataccaccagagcaacccaagtggatt 17034988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 18316520 - 18316571
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||| |||||||  ||||||||| ||||||||||||    
T  18316520 gaggagcacactccaaggtcccaagccagcaccaccagaccaacccaagtgg 18316571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 31510716 - 31510791
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| |||||  | ||||||||| ||||| | ||| |||| ||||||||||||| ||||| ||||||    
T  31510716 gagaatcgaactttagaccgtatggaggagcatactcccaagtcccaagtcaataccaccagaccaacctaagtgg 31510791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 33899706 - 33899655
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||| | |||||||||||| ||||||||  ||||||||||||||||    
T  33899706 aaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactcc 33899655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 40268566 - 40268492
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| |||||||| ||| |||||| |||||| ||||| |||||||| ||||||||   |||||||||||    
T  40268566 gagaatcgaacctgagaccttaag-aggagcccactccaaggtcccaagccaacaccaccaggcaaacccaagtgg 40268492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 42799769 - 42799820
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||| |||||||| ||||||||  ||||||||||||    
T  42799769 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 42799820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 43902360 - 43902415
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    ||||||||||  ||||||||| ||||| ||| |||||||||||| |||||||||||    
T  43902360 gagaatcgaatctgagacctcgaggagaagcgcactcctaggtcacaagccaatac 43902415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 54990780 - 54990706
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  ||||||||||| |||| ||||| |||||||| | ||| | ||||||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaacaacacta-aacaacccaagtgg 54990706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8390730 - 8390640
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||| |||||||||  | ||||||  |||| ||||||||| | | ||| |||| ||||||||| ||| ||| ||||||||    
T  8390730 taaattgacactagaaagaatcgaatctaagaccttgaggaagagcacacttccaagtctcaaggcaataccactagaccaatccaagtgg 8390640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 11090147 - 11090217
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    ||||||||||||| || |||||||||  | ||||||| |||||||||||| ||| || || ||||||||||    
T  11090147 ttaaattgacactcgaaagaatcgaaactaagacctcgaggaggagcacattcccagatcccaagccaata 11090217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 11612373 - 11612307
Alignment:
Q  24 atcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaaccca 90  Q
    ||||||| |||||||| ||||||||||||||||| || || ||||  |||||||||||  |||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 16212972 - 16213050
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    |||| ||||||||||||| ||||||||||||||||| | ||| |||| ||| | ||  ||| |||||||||||| ||||    
T  16212972 gaattgaacttgagaccttaaggaggagcacactcccaagtctcaaggcaacatcattagaccaacccaagtgggttga 16213050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 46518709 - 46518631
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||| ||| ||||  |||||||||||||||| || || |||||||||||||| |   ||||||||||||    
T  46518709 agagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgg 46518631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 8170764 - 8170679
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||||||| ||||  |||||||| ||||||||  || ||||||||||||| | ||  |||||||||||||| ||  ||||||||    
T  8170764 aaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaa 8170679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 16991622 - 16991549
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||| ||  ||||||||||| || ||| ||||||| || || |||||||||||||||||  ||||||||    
T  16991622 gagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggccaacccaa 16991549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 17554827 - 17554778
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||| ||||||||||| ||||| |||||||||||||||| | ||||||||    
T  17554827 aggaagagcacactcccaggtcccaagccaataccaccaaaccaacccaa 17554778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 19154723 - 19154654
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    |||||||||  | |||||||||||| ||||||||  |||||||||||||||  ||| | |||||||||||    
T  19154723 aaattgacatcaaagagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatac 19154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 28531042 - 28531111
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    |||||||||| ||||||||| || | | ||||||| |||||||||| ||||| || || |||||||||||    
T  28531042 aaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 30232410 - 30232333
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| |||| |||||||   |||||||||||| | | || |||||| |||||||||||||  ||||||||||||    
T  30232410 gagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccaccagggcaacccaagtgg 30232333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 31788955 - 31789043
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||||| |||| ||| | | ||||| |||||||||||||||| || || |||||||||| ||| ||  ||||||||||||    
T  31788955 aaattgacac-agagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgg 31789043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 34844446 - 34844374
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| ||||||||  || ||||||||||||| ||||| |||||||| | ||||||  ||||||||||||    
T  34844446 gaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacaacaccagggcaacccaagtgg 34844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 40777104 - 40777017
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||||||||||||| ||| ||||||||  | |||||||||||||| | ||| || | ||| ||||||||| ||||||||||||    
T  40777104 aaattggcactagagagaatcaaacctgagaccttga-gaggagcacactccaatgtcccatg-caacaccaccagatcaacccaagtgg 40777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 47236969 - 47237030
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||||||| ||||||||  | ||||||||||||||  |||| ||| |||||||||||||    
T  47236969 gagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccag 47237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 47279405 - 47279458
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacc 76  Q
    |||||||| |||||||| ||||||||||||||||| || || ||||| ||||||    
T  47279405 aatcgaacatgagaccttaaggaggagcacactcccagatcccaagcaaatacc 47279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 47810740 - 47810817
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| |||  |||||||   ||||||||||||||| | | |  ||||||||||||||||| ||||||||||||    
T  47810740 gagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgg 47810817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 8796088 - 8796128
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||||||||||||||||  |||||||||| |||||    
T  8796088 agagagaatcgaacttgagaccttgaggaggagcatactcc 8796128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 16900679 - 16900731
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaa 72  Q
    ||||||||||| ||||||||  | |||||||||||||| ||||| ||||||||    
T  16900679 gagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaa 16900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 19716275 - 19716215
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||||||  |||||||  ||||||||||||||||  |||| |||||||| |||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaacaccacca 19716215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 36010823 - 36010783
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    ||||||||||||||||||||| |  ||||||||||||||||    
T  36010823 agagagaatcgaacttgagactttgaggaggagcacactcc 36010783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 15319 - 15396
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgg 15396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 33549184 - 33549107
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgg 33549107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 12188287 - 12188376
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||||||||||||||||||||| ||||  |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  12188287 aaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 12188376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 12234490 - 12234580
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| ||||||||||||| ||||||||| ||  |||||||||||| ||||| |||| ||||||||||||  ||||| ||||||    
T  12234490 taaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgg 12234580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 10338161 - 10338246
Alignment:
Q  9 ttgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||| | | ||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  10338161 ttgacactggggggaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 28841507 - 28841434
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||  ||||||||||||||||||||||  ||||||||||||||||| |||| |||||||| |||||    
T  28841507 taaattgacaccggagagaatcgaacttgagaccttgaggaggagcacactccttggtctcaagccaaaaccac 28841434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 31622975 - 31623064
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||  ||| || || ||| ||||||||| |||||||||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  31622975 aaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgg 31623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 6776591 - 6776679
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||| || |||||||||| |||||||||| || ||||||||||||| || || || |||||||||||||||||  |||||||||||    
T  6776591 aaattgaaaccagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 21418561 - 21418477
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||| |||||| |||||||||||||||||| |  |||||||||||||||| | ||| |||||||||||||||||  ||||||||    
T  21418561 aattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 21418477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 6758405 - 6758495
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| |  ||  ||||||||||||||||  |||| |||||||    
T  6758405 taaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgg 6758495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 30127477 - 30127403
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||||||||| | |||||||||||||| ||  | |||||||||||||||||| ||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgg 30127403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 4105143 - 4105048
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagcc---aataccaccagaacaacccaagtggatt 98  Q
    |||||||||| ||||| |||||||| ||||| || ||||||||||||||||||||||  ||||||   |||||||| ||| |||| ||||||||||    
T  4105143 aaattgacaccagagaaaatcgaacctgagatcttaaggaggagcacactcctaggtttcaagccaataataccactagaccaactcaagtggatt 4105048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 14558040 - 14557965
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| |||||||   |||||||||||||| | ||||| |||||||| ||||||||| ||||||||||||    
T  14558040 gagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgg 14557965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32613119 - 32613213
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||||  |||||||||||| ||||| ||  || ||||||||||||| ||  | |||| ||||||||||||  ||||||||||||    
T  32613119 catttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtgg 32613213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 3715545 - 3715472
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||| ||||||||||||||||||||||| | ||| |||| ||||| || || |||| |||||||||    
T  3715545 taaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccac 3715472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 6385942 - 6385881
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacc 79  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||| |||| ||||||||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccacc 6385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 12216837 - 12216753
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaaccc 89  Q
    |||||||||| |  |||||||||||| ||||||||| || ||||||||| ||  ||||| ||| |||||||||||||| ||||||    
T  12216837 taaattgacagtcaagagaatcgaacctgagacctcgagaaggagcacattcgcaggtcccaaaccaataccaccagaccaaccc 12216753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 20213133 - 20213061
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||||||| ||||||||| |||||| |  |||||||||||||||| ||||| |||||  |||||||    
T  20213133 aaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 20213061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 22107156 - 22107084
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||||||| ||||||||| |||||| |  |||||||||||||||| ||||| |||||  |||||||    
T  22107156 aaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccac 22107084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 12633103 - 12633012
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| | ||||||||||||| ||||| ||| | |||||||||||||| |  || |||| ||||| |||| | |||||||||||||    
T  12633103 ttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccgggacaacccaagtgg 12633012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 13441101 - 13441050
Alignment:
Q  47 gagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||| ||||| ||||||||||||||| || |||||||||||||||    
T  13441101 gagcacactcccaggtcccaagccaataccacccgaccaacccaagtggatt 13441050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 33560457 - 33560382
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| |||||| | |||||||| |||||||| ||||| |||||||| ||||| || |||||| ||||||    
T  33560457 gagaatcgaacatgagactttaaggaggatcacactccaaggtctcaagccaacaccactaggacaaccaaagtgg 33560382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 346624 - 346551
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||||  | ||||||||||| ||||||||| ||||| |||||||||| ||||| |||| |||||||||    
T  346624 ttaaattgacacgggtgagaatcgaacatgagacctcgaggagaagcacactcc-aggtcccaagtcaataccac 346551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 11423658 - 11423572
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaag 92  Q
    ||||||||||| |||| |||||||| ||||||||| ||||| |||| ||||| |  || |||| ||||||||||||| || ||||||    
T  11423658 aaattgacactggagaaaatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaag 11423572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 13227154 - 13227231
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||||| || |||||||||||||||| || || ||  ||||||||||  |  ||||||||||||    
T  13227154 gagagaatcgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgg 13227231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 14199931 - 14200016
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||  ||||||||  ||||||||  |||||||||||||||| | ||| |||||| ||||| | ||| ||||||||    
T  14199931 aaattgacactagaaggaatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcctatacctctagagcaacccaa 14200016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 34786450 - 34786507
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    |||||||||||||||||||| || || ||||||||||||| || || |||||||||||    
T  34786450 gagagaatcgaacttgagacttcgagaaggagcacactcccagatcccaagccaatac 34786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 34444881 - 34444809
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaag 92  Q
    ||||||||||| ||||||||   ||||||||||||||  ||||| |||| ||||||||||||  |||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 9626121 - 9626070
Alignment:
Q  9 ttgacactagagagaatcgaacttgagacctcaaggaggagcacactcctag 60  Q
    |||||||  ||||||||||||| ||||||||| |||||||||| ||||||||    
T  9626121 ttgacaccggagagaatcgaacatgagacctcgaggaggagcatactcctag 9626070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 32201868 - 32201943
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||| | | |||| |||||||||||| || | ||||||||||||||||  || || ||||||||||||||||    
T  32201868 taaattgataatggagataatcgaacttgaaacttaaaggaggagcacactctgagatcccaagccaataccacca 32201943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 20863467 - 20863393
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||| || ||||||||||| ||  ||||||||  |||||||||||||||| | ||| |||||||| |||||||    
T  20863467 aaattggcattagagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaacaccacca 20863393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 24256805 - 24256839
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacct 39  Q
    ||||||||||| |||||||||||||||||||||||    
T  24256805 taaattgacaccagagagaatcgaacttgagacct 24256839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 11854755 - 11854726
Alignment:
Q  65 caagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||||||||||||||||||||||    
T  11854755 caagccaataccaccagaacaacccaagtg 11854726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 13113958 - 13114015
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacc 76  Q
    |||||||| ||||| ||| ||| |||||||||||||| | ||||| ||||||||||||    
T  13113958 agagaatcaaacttcagatctcgaggaggagcacacttcaaggtcccaagccaatacc 13114015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 15951297 - 15951382
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgatt 102  Q
    ||||||||| |||| ||||||||  |||||||||||||||| |  || |||||  ||||||| || ||||||||| ||| ||||||    
T  15951297 agagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaagcttataccacaaggacaacccaactgggttgatt 15951382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 16405178 - 16405109
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    |||||||||||  | ||||||||||  ||||||||| ||||| |||||||||| ||||| ||| ||||||    
T  16405178 taaattgacacaggtgagaatcgaaactgagacctcgaggagaagcacactcccaggtcccaaaccaata 16405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 24617159 - 24617083
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||||||||| | |||||| | ||||||||| ||| |||| || ||| |||||||||| ||| |||||||||||    
T  24617159 agagagaatcgaaccttagacctga-ggaggagcatacttctagatctcaaaccaataccacgagatcaacccaagtg 24617083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 6691547 - 6691626
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||||| ||||||||  || ||||||||||||| |||||  ||| ||| ||||||||  |||||||||| ||||    
T  6691547 gagagaatcgaacctgagaccttgag-aggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagttgatt 6691626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 8268730 - 8268638
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||| |||||||| |||||||||| || ||| |  |||||||||||||||| |  || |||| ||| |||| |||| |||||||| ||||||    
T  8268730 aaattcacactagatagaatcgaacatgtgactttgaggaggagcacactcccaaatctcaaggcaacaccatcagaccaacccaaatggatt 8268638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 24641188 - 24641248
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||||||||| | | ||||| |||||||||||||||| || || |||| |||||||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccacca 24641248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 28364029 - 28363957
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||| ||||| |||||||  ||||||||  |||||||||||||||  || || ||| ||||||||||    
T  28364029 aaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccac 28363957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 21660127 - 21660215
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||||||||||| || || |||| ||||||||||||| ||||||||||    
T  21660127 taaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagt 21660215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 21668891 - 21668979
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||||||||||| || || |||| ||||||||||||| ||||||||||    
T  21668891 taaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagt 21668979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 51948577 - 51948483
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||| |||||||| |||| ||||||||| |||||| |||||||||||| || |||| |||||| ||||| |||||||||||||    
T  51948577 catttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgg 51948483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 13901835 - 13901746
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||||    
T  13901835 taaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 4185186 - 4185096
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||| ||||||| || ||| ||| |||||||||||||| ||||| ||||||    
T  4185186 taaattgacactagggagaatcgatcttgagacctcgaggaggatcacactcttaagtcccaaaccaataccaccagatcaaccaaagtgg 4185096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 7292782 - 7292871
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||||||||||||||||| |||||| |  |||||||||||||||| ||||  |||||||||||||| ||| ||||||||||||    
T  7292782 aaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 8306577 - 8306488
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||| ||||| |||||| || ||| |||| |||| |||||||    
T  8306577 aaattgacactagagagaatcgaacttaagacttcgaggaggagcacactcccaggtctcaagccgatgccaacagaccaactcaagtgg 8306488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 37109335 - 37109424
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 37109424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 7949437 - 7949508
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacc 76  Q
    ||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||||||    
T  7949437 taaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatacc 7949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 8030188 - 8030277
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||| | ||| |||||| ||||||| ||  ||| ||||||||    
T  8030188 aaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgg 8030277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 28635788 - 28635699
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| | ||||||| |||||||||||||||| || || |||| || ||||||||| |||||||||||||    
T  28635788 aaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgg 28635699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 23378048 - 23377980
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    |||||| |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||||    
T  23378048 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24234725 - 24234649
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||||||||||||||  |||| ||||||||||| | ||| ||||||||||||||| | ||||||||||||    
T  24234725 gagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 55427198 - 55427278
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||||||||| ||||||||| || ||||||| ||||| ||||| |||||||||||||||||  |||||||||||| ||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggttga 55427278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 19238575 - 19238650
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||  |||||||| |||||||||||||||| | ||| |||||||||||||||||  ||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgg 19238650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 39509163 - 39509073
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||| | ||||||||||| ||||||||| |||||||||||||||| || || ||||||| |||||  ||| ||||||||||||    
T  39509163 taaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgg 39509073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 49576878 - 49576968
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgga 96  Q
    ||||||||| | ||||||||||||| ||||||||  |||||||||||||||| | |||  ||||||||||||||||  |||||||| ||||    
T  49576878 aaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaattgga 49576968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 13015520 - 13015447
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||  ||||||||||||| |||||| || |||||||||||||||| | ||| ||||||||||||||    
T  13015520 taaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccac 13015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29195186 - 29195098
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| || |||||||||||||||||| |||||  || ||||||||||||| ||||| |||||||| ||||||||  ||||||||||||    
T  29195186 aaattggcattagagagaatcgaacttgcgaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 29195098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 27965485 - 27965583
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggagga-------gcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| |||||||||||||||||||||||||||||||||       ||||||||| || || |||||||||||||| ||  ||||||||||||    
T  27965485 ttaaatcgacattagagagaatcgaacttgagacctcaaggaggagtccactgcacactcccagatcccaagccaataccactaggccaacccaagtgg 27965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 17618353 - 17618299
Alignment:
Q  26 cgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||| ||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  17618353 cgaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccacca 17618299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 31759657 - 31759731
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||  ||||||||  |||||||||||||||| | ||| |||||||||||||| ||| ||||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgg 31759731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 32992704 - 32992638
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaa 72  Q
    ||||||||||  | ||||||||||||||||||||  |||||||||||||||| ||||| ||||||||    
T  32992704 aaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31826701 - 31826612
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| || ||||||||||||||||||  |||||||||||||||  |  || |||||| ||||||| ||  ||||||||||||    
T  31826701 aaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgg 31826612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 51250522 - 51250595
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||| ||  ||| |||||||||||| || || |||||||||||||||||  ||||||||||||    
T  51250522 gaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgg 51250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 2622378 - 2622446
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaat 73  Q
    ||||||| ||| |||||||||||||| |||||| |  |||||||||||||||| ||||| |||||||||    
T  2622378 taaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 37980132 - 37980219
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||| | ||||||||||| ||||||||  || ||||||||||||| ||||| |||||||| | ||||||  |||||||||||    
T  37980132 aaattgacactggggagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggccaacccaagtg 37980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 38869860 - 38869788
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| |||| ||||||||| ||||||||  |||||||||||||||| || || ||||||||||||||    
T  38869860 aaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccac 38869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 37720212 - 37720287
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| || |||||  |||||| ||||||||| ||||| |||||||||| ||||||  ||||||||||||    
T  37720212 gagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgg 37720287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 46295175 - 46295100
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  |||||||||||||||| | ||| |||||||| || |||||| ||||| ||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgg 46295100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 30557267 - 30557344
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggat 97  Q
    |||||||||||| |||| |||| |  ||||||||||||||| ||| |||| ||||||||||||| ||| ||||||||||    
T  30557267 agagaatcgaacatgagccctcgaaaaggagcacactcctacgtcccaagtcaataccaccagaccaa-ccaagtggat 30557344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 30938217 - 30938275
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||| ||||||||| |||||||||||||||| || || ||| ||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccac 30938275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 46545804 - 46545714
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||  ||||| |||||||  ||||| ||  |||||||||||||||  ||||| |||||||||||||| ||  ||||||||||||    
T  46545804 taaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgg 46545714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 52254390 - 52254480
Alignment:
Q  8 attgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||| |||| ||||||||| ||| ||| |||||||||||||||||||||  |  || |||| |||||||| |||| |||| ||||||||||    
T  52254390 attggcactggagagaatctaacctgaaacctcaaggaggagcacactctcatatcccaagtcaataccatcagaccaactcaagtggatt 52254480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 4911255 - 4911304
Alignment:
Q  45 aggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||||||| ||| ||||| |||||||||||| |||||||||||    
T  4911255 aggagcacactcctaagtcccaagctaataccaccagaccaacccaagtg 4911304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 5795393 - 5795482
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| | ||||||| ||| ||||||||  |||||||||| ||||| ||||  |||| ||| ||||||||| ||||||||||||    
T  5795393 aaattggcactggggagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgg 5795482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 8325363 - 8325452
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||  | ||||||||||| | ||||||  |||| ||||||||||| ||||| |||||||| |||||| |  ||||||||||||    
T  8325363 aaattgacaccggggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgg 8325452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 37274441 - 37274510
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaat 73  Q
    |||||||  ||| |||||||||||||| | ||||||  |||||||||||||||| ||||| |||||||||    
T  37274441 ttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 43623427 - 43623516
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||  |||| |||||||||||| |||||| |||||||||||||||||||  | || |||| ||||| ||| |||  ||||||||||    
T  43623427 taaattgctactatagagaatcgaacctgagacttcaaggaggagcacactccctgatctcaagtcaatatcactagactaacccaagtg 43623516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 19531997 - 19532057
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    |||||||||||||| ||| | || |||||||||||| |||||| ||| |||||||||||||    
T  19531997 agagagaatcgaacctgaaaacttaaggaggagcacgctcctatgtcccaagccaatacca 19532057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 33619285 - 33619209
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| | ||||||||||||||| ||| |||| || ||  |||||||||||||||   ||||||||||||    
T  33619285 agagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgg 33619209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 33756056 - 33755968
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    |||||||| | |||||| ||| ||||||||||||||||  ||||||||||| | | ||| |||||||| ||||  ||| ||||||||||    
T  33756056 taaattgatattagagataattgaacttgagacctcaaacaggagcacactaccaagtctcaagccaacaccattagaccaacccaagt 33755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 40285716 - 40285664
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||| ||| |||| |||||||||||| ||||||||| ||||||||||||||    
T  40285716 taaattaacattagaaagaatcgaactttagacctcaaagaggagcacactcc 40285664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41047573 - 41047518
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||||| ||| ||||||||||||| |||||| ||||| |||||||||||||    
T  41047573 catttaaattgatacttgagagaatcgaac-tgagacttcaagtaggagcacactcc 41047518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 19229206 - 19229276
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||| ||||||||| |||||||||||| | ||| ||| || ||||||||||||||  ||||||||    
T  19229206 gagaatcgaacctgagacctcgaggaggagcaca-ttctaagtcccaggccaataccaccaggccaacccaa 19229276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 19680770 - 19680861
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| ||| |||||||||||||| | ||||||  |||| ||||||||||| | ||| ||||| |||||||| ||  ||| ||||||||    
T  19680770 ttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgg 19680861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 20609000 - 20608925
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||||||||  | ||| | ||||||||  | || ||||||||||||| |||| ||||||||||||    
T  20609000 gagaatcgaacttgagaccttgatgagaaacacactcccggatctcaagccaataccatcagatcaacccaagtgg 20608925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 47044795 - 47044720
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||| |||||||||| ||||  || || |||| ||||||||||||  ||| ||||||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgg 47044720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 47386774 - 47386825
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||||||||||||| |||| |||||||||||| || ||| |||||    
T  47386774 taaattgacactagagagaattgaacctgagacctcaagaagaagcgcactc 47386825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 4688625 - 4688579
Alignment:
Q  36 acctcaaggaggagcacactcctaggtcgcaagccaataccaccaga 82  Q
    ||||||||||||| |||| ||| ||||| ||||||||||||||||||    
T  4688625 acctcaaggaggatcacattcccaggtcccaagccaataccaccaga 4688579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 9241028 - 9241098
Alignment:
Q  25 tcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| | ||||||| || ||||||||||| | || || |||||||||||||||||  ||||||||||||    
T  9241028 tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgg 9241098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 12798765 - 12798687
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||| ||||| ||||| |||||||||| || || ||| ||||||||||  |  ||||||||||||    
T  12798765 agagagaatcgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgg 12798687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 15729574 - 15729524
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||  | |||||||||||||||||| || |||||||||||||||    
T  15729574 aaattgacaccggtgagaatcgaacttgagacatcgaggaggagcacactc 15729524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 21344909 - 21344820
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| | |||||| |||| ||||||||  || ||||||||||||| ||||| |||||||| | || |||  ||||||||||||    
T  21344909 taaattgacactggggagaattgaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgg 21344820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 41346962 - 41347036
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||| || |||||||||| ||||| || || ||| ||||||||| |||  ||||||||||||    
T  41346962 agaatcgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 9693482 - 9693527
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagca 51  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||||||    
T  9693482 aaattgacactagagggaatcgaacctgagaccttgaggaggagca 9693527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 10048061 - 10048000
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||||| |||||||   || ||||||| |||| |||||| ||||||||||||||    
T  10048061 agagagaatcgaacctgagaccatgagaaggagcatactcttaggtcccaagccaataccac 10048000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 19112986 - 19112929
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    ||||||||||| ||| | ||| | |||||||||||||||||||| |||| ||||||||    
T  19112986 gagaatcgaacctgataactcgaagaggagcacactcctaggtctcaagtcaatacca 19112929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 49262667 - 49262740
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||| |||| | ||||||||||| |||||||||||  ||||||||||||  | ||| ||||| ||||||||    
T  49262667 taaattggcactggggagaatcgaacctgagacctcaacaaggagcacactctcaagtcccaagcgaataccac 49262740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 4249269 - 4249197
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| |||||||||| ||| ||||||||  |||||||||||||||| |  || |||||| |||||||    
T  4249269 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccac 4249197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 13265090 - 13265162
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacc 76  Q
    |||||||| | | |||||||||||||  ||| |||  ||||||||||||| ||| ||||| ||||||||||||    
T  13265090 ttaaattggctcaagagagaatcgaatctgaaaccataaggaggagcacattcccaggtcccaagccaatacc 13265162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 16581785 - 16581713
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| ||||| ||| |||| ||||||||  |||||||||| ||||| ||||  ||||||||||||||    
T  16581785 aaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaataccac 16581713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 37443792 - 37443705
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||| ||||| |||||||| ||| |||||   |||||| ||||||| || || |||||||||||||| ||  ||||||||||||    
T  37443792 taaattggcaccagagataatcgaacatgaaacctc---gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgg 37443705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 39030135 - 39030187
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgga 96  Q
    |||||||||||||| ||||| |||||||| ||||||||  |||||| ||||||    
T  39030135 gaggagcacactccaaggtcccaagccaacaccaccaggccaaccccagtgga 39030187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 51622577 - 51622521
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggt 62  Q
    |||||| ||| ||||||| |||||| ||||||||  |||||||||||||||| ||||    
T  51622577 aaattggcaccagagagagtcgaacctgagaccttgaggaggagcacactccaaggt 51622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 56410028 - 56409949
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||||||||| ||||||||  || ||||||||||||| ||||| |||||||| | ||||||  || ||||||||| ||||    
T  56410028 gagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacagcaccaggccagcccaagtgggttga 56409949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2220069 - 2219975
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| | ||||||||||||| ||||||||| ||||| ||||||||   ||||  |||||||||||||||||||||||||||||||    
T  2220069 catttaaattgacattggagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaacaacccaagtgg 2219975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 40257491 - 40257402
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||  || ||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||  ||||||||||||    
T  40257491 aaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgg 40257402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 17745239 - 17745328
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||||||| |  ||||| |||||||||||||| ||  |||||||||||    
T  17745239 taaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 37400351 - 37400279
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||||||||||||||||| |||||||||||||||   ||||| |||||||||||||||||| ||||||||||    
T  37400351 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagt 37400279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 19528325 - 19528407
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgatt 102  Q
    ||||||||||| ||||||||  ||||||||||||||| ||| || |||||||||||||||||  |||||||||||| ||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggttgatt 19528407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 15786304 - 15786393
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| | |||||||||||| ||||||||  |||||||||||||||| || || ||||||||||| || ||| ||||||||||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 24047085 - 24047174
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||| |||| | ||||||||||||||| ||||| |||||||||||||||| | ||| |||||||||||||  ||| |||||||||||    
T  24047085 taaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccatgagaccaacccaagtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 44961857 - 44961768
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||||||||||||| |||||||   ||||||||||||||| ||  || ||||| ||||||||| || ||||||||||||    
T  44961857 aaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgaccaacccaagtgg 44961768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 31383795 - 31383855
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacc 79  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccacc 31383855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 33700755 - 33700846
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| ||| |||||||||||||| ||||||||  |||||||||||||||| || |  |||||||||||||| ||  ||||||||||||    
T  33700755 ttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtgg 33700846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 1690080 - 1690150
Alignment:
Q  25 tcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| |||  |||||||    
T  1690080 tcgaacttgagacctcaaggaggaacagactcccaggtcccaagccaataccaccagaccaattcaagtgg 1690150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11068822 - 11068912
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||||||||||||| |||||||| |||  ||||  ||||| ||||||||||||||| | || |||| ||||||||||||| ||||||||    
T  11068822 catttaaattgacactggagagaattgaatctgaggtctcaaagaggagcacactcctggatcccaagtcaataccaccagatcaacccaa 11068912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 19940855 - 19940945
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||  ||||||||| ||| |||||||| ||||||||||||||||| ||| | ||||| || ||||||||| ||||||||||||    
T  19940855 taaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaacccaagtgg 19940945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 40814390 - 40814444
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcct 58  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  40814390 ttaaattgacactagagagaatcgaacctgaaacctcaaggatgagcacactcct 40814444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 44126488 - 44126398
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||||||||||||| ||  |||||||||  ||||||||||||||| ||||| || | ||||||||||||  ||||||||||||    
T  44126488 taaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgg 44126398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 6122886 - 6122801
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||||||||| | ||| |||||| ||||||| ||  ||||||||    
T  6122886 aaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 6122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 9165179 - 9165268
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| ||||||||| |||| |||||| |  |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  9165179 aaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 9165268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 31794248 - 31794337
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||| ||||||||||  ||||||  |||||||||||||||| | ||| |||||||||||||| ||  ||||||||||||    
T  31794248 aaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgg 31794337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 26232398 - 26232462
Alignment:
Q  34 agacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||||| ||||||||||||| || || |||||||||||||| ||| |||||||||||||||    
T  26232398 agacctcaagcaggagcacactcccagatctcaagccaataccactagaccaacccaagtggatt 26232462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 27476766 - 27476826
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    |||||||||| ||||||||| ||| |||||||||||||||||| ||| |||||||||||||    
T  27476766 agagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaatacca 27476826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 52336758 - 52336830
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||| ||||| |||||||| ||||| || ||||||||||||||||| || || ||||||||||||||    
T  52336758 aaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccac 52336830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 4566642 - 4566551
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||  |||||||||||||| |||||||   |||||||||||||||| ||||  |||||||||| ||| ||  ||||||||||||    
T  4566642 ttaaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgg 4566551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 30689106 - 30689015
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| |||| | |||||| |||| |||||||||||||||||||| ||||| |||||  |||||||||||| |||  ||||| ||||||    
T  30689106 ttaaattggcactggggagaattgaacatgagacctcaaggaggagcaaactcccaggtcctaagccaataccatcagggcaacctaagtgg 30689015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 50901674 - 50901584
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaa-taccaccagaacaacccaagtgg 95  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||| | ||||| |||||||| |||||| ||  ||||||||||||    
T  50901674 taaattggcact-gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgg 50901584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 36371551 - 36371473
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| | ||||||  |||||||||||||||| ||||  |||||||||||||| ||  ||||||||||||    
T  36371551 agagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 36371473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 10526915 - 10526830
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||||| | |||||||||||||  ||||||||  |||||||||| ||||| ||||| ||||||||||||||  || ||||||||    
T  10526915 aaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaa 10526830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 11063648 - 11063563
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||| |||||||||||||||||| | ||||||  ||||||| ||||||   ||||| |||||||||||||| ||| ||||||||    
T  11063648 aaattggcactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaa 11063563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 16893486 - 16893397
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||  |||| |||||||| ||||||||| |||||||| ||||||| |  || ||||||||||||| |||  ||||||||||||    
T  16893486 aaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgg 16893397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 25494052 - 25494125
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||| |||||| ||||| |||||| |||||||| ||||| |||| |||||||| || ||||||||||||||    
T  25494052 taaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaataccac 25494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 2799954 - 2799882
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||||||||| || || |||||| |||||||    
T  2799954 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccac 2799882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 8177166 - 8177238
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| |||||||||||||| ||| ||||  |||||||||||||||| || || ||||||||||||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccac 8177238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 9224855 - 9224779
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||||| ||||||||||||||| |||| ||||  || || |||  ||||||||||||| |||||||||||    
T  9224855 gagagaatcgaacctgagacctcaaggagaagcatactctcagatctcaaagcaataccaccagaccaacccaagtg 9224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 17440010 - 17439958
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||    
T  17440010 taaattgacactggagagaatcaaacatgagacctcgaggaggagcacactcc 17439958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 21547475 - 21547551
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    |||||||||||||| ||| ||||| ||||||||||| |||| | ||| |||||||||||||| ||  ||||||||||    
T  21547475 agagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagt 21547551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 52116766 - 52116850
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||| |||||| |||||| |||| |||||| |  |||||||||||||||| | ||| |||||||||||||||||  ||||||||    
T  52116766 aattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 52116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 37047039 - 37046988
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||| |||||||| ||||||||| ||||||||||||    
T  37047039 gaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgg 37046988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 51703873 - 51703786
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||| || |||||||||||||| ||| || |  |||||||||||||||| || |  |||||||||||||| ||| ||||||||    
T  51703873 ttaaattgataccagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaa 51703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 52029935 - 52029994
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacc 79  Q
    ||||||||||| ||||||||  || ||||||||||||||||||| |||| ||||||||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactcctaggtctcaagtcaataccacc 52029994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 1094618 - 1094528
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||  |||||||||||| ||||||||||  ||||||||||||||  ||||  |||| |||||||| || | ||||||||||||    
T  1094618 taaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaataccaacaaaccaacccaagtgg 1094528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 4825049 - 4824975
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||| ||| ||||||||  | |||||||||||||| ||||| |||||||| |||| |||| |||||||||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtg 4824975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 8904506 - 8904456
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    |||||| ||| |||||||||||||||||||||||  |||||||||||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12370258 - 12370192
Alignment:
Q  3 tttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagc 69  Q
    |||||||||| ||  ||||||||| ||| ||||||||| |||||||||||||||| ||||| |||||    
T  12370258 tttaaattgataccggagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 18459243 - 18459305
Alignment:
Q  34 agacctcaaggaggagcacactcctaggtcgcaagccaa-taccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||| ||| ||||||||||||    
T  18459243 agacctcaaggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgg 18459305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 36124903 - 36124853
Alignment:
Q  28 aacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||||||||||||||||||||  ||||| |||| |||||||||    
T  36124903 aacttgagacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 6650688 - 6650615
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||| |||||||||||||| |||||| |  |||||||||| |||||  | || ||||||||||||||    
T  6650688 taaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccac 6650615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 12587350 - 12587285
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaa 83  Q
    ||||||||||||| ||||||||| |||||||||||||||  || || |||| ||||| ||||||||    
T  12587350 gagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcaccagaa 12587285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 18037609 - 18037686
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||||||| ||| |  ||||||||||||| | ||| ||| |||||| || |||| ||||||||||||    
T  18037609 gagagaatcgaacttgagatctcgaaaaggagcacactcccaagtcccaaaccaatatcatcagaccaacccaagtgg 18037686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 21694520 - 21694444
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    |||||||||| ||||||||    |||||||||||||| | ||| |||||||||||||||||  |||||||||||| ||||    
T  21694520 agaatcgaacctgagacctt---gaggagcacactcccaagtctcaagccaataccaccaggtcaacccaagtgggttga 21694444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31049706 - 31049637
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    |||| |||||| |||||||||||||  ||||| ||  ||||||||||||||||||| || ||||||||||    
T  31049706 taaactgacaccagagagaatcgaagatgagatctttaggaggagcacactcctagatcccaagccaata 31049637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 31605846 - 31605903
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    ||||||||||||||||||||  |||||||||||||| | ||||| |||||||| ||||    
T  31605846 gagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacacca 31605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 51814574 - 51814497
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||||||||  |||||||||||||||  || || |||| |||||||| |||  ||||||||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgg 51814497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 9117196 - 9117140
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    |||||||||| |||||||||||||||||||||||| | || || |||||| ||||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacacttccagatcccaagcccatacca 9117140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 16169976 - 16170056
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||||||||| ||| ||||  ||||||| |||||||| ||||| |||| ||||||||||||   ||||||||||| ||||    
T  16169976 gagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggttga 16170056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 17410309 - 17410233
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgga 96  Q
    ||||||||||||||||| ||| ||||||| |||||||| || || ||| |||||||||| ||  |||||||| ||||    
T  17410309 gagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaattgga 17410233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28411427 - 28411347
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||||||| ||| ||||||||| |||  ||||||||||| |||||||||||||  |  || |||| ||||||||||||    
T  28411427 catttaaattggcaccagagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccag 28411347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 42983356 - 42983432
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||| |||  ||||||||||||| |  |||||||||||||| |||||||| || || |||| |||||||||||    
T  42983356 ttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccacca 42983432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 45235388 - 45235452
Alignment:
Q  31 ttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||||| | ||| ||| ||||||||| |||| ||||||||||||    
T  45235388 ttgagatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgg 45235452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 47720886 - 47720830
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||||||||||  || |||| ||||||||||||| |||||||| ||||||    
T  47720886 aggaggagcacactcctatatctcaagtcaataccaccagatcaacccaaatggatt 47720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 47727878 - 47727822
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||||||||||  || |||| ||||||||||||| |||||||| ||||||    
T  47727878 aggaggagcacactcctatatctcaagtcaataccaccagatcaacccaaatggatt 47727822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 50920046 - 50919974
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||| |||||||||||||| ||| |||| ||||| ||||||||||  ||||  |||| |||||||||    
T  50920046 aaattgacaccagagagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaataccac 50919974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 952589 - 952514
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||| |||||| |  |||| ||||||||||| ||||| |||||||| ||||||||| |||| |||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagaccaactcaagtgg 952514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 1600276 - 1600327
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||| |||||||||||||| ||| || | |||||||||||||||||    
T  1600276 aaattgacaccagagagaatcgaacctgaaactttaaggaggagcacactcc 1600327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 3799999 - 3799936
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaag 68  Q
    ||||||| |||||||||||||||||| ||| || || |||||||||||| ||||| ||| ||||    
T  3799999 taaattggcactagagagaatcgaacctgaaacttcgaggaggagcacattcctaagtctcaag 3799936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 15581163 - 15581214
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||| |||||||| ||||||||  ||||||||||||    
T  15581163 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 15581214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 26232352 - 26232395
Alignment:
Q  13 cactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    |||| |||||||| |||| |||||||||||||||||||||||||    
T  26232352 cactggagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 28283624 - 28283573
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||| |||||||||||||| |||||| ||||||| || |||||||    
T  28283624 taaattgacaccagagagaatcgaacctgagacatcaaggaagaacacactc 28283573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 42949274 - 42949332
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggt 62  Q
    |||||||| |||  ||||||||| ||  ||||||||| |||||||||||||||||||||    
T  42949274 ttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcctaggt 42949332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 1205426 - 1205455
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcac 52  Q
    ||||||||||||||||||||||||||||||    
T  1205426 aatcgaacttgagacctcaaggaggagcac 1205455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 12259338 - 12259301
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||||||||||| || ||||||||||||||||    
T  12259338 gagaatcgaacttgagacttcgaggaggagcacactcc 12259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 21184391 - 21184444
Alignment:
Q  25 tcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||||||  || ||||||||||||  ||||| ||||||||||||||    
T  21184391 tcgaacttgagaccttcagaaggagcacactcgcaggtcccaagccaataccac 21184444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 28022138 - 28022191
Alignment:
Q  35 gacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacc 88  Q
    |||||| ||||| |||||| ||| ||||| ||||||||||||||||| ||||||    
T  28022138 gacctcgaggagaagcacaatcccaggtcccaagccaataccaccaggacaacc 28022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 43446041 - 43445984
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    ||||||||||| ||||||||  |||||||||||||||| ||| | |||||||| ||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaacacca 43445984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 3266005 - 3265965
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    |||||||||||||| ||||||||  ||||||||||||||||    
T  3266005 agagagaatcgaacctgagaccttgaggaggagcacactcc 3265965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 6948060 - 6948152
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggat 97  Q
    |||||||||||  | |||||| |||| ||||||||| ||||| |||||||||| || |  ||| | ||||||||| || ||||||||| ||||    
T  6948060 taaattgacaccggtgagaattgaacatgagacctcgaggagcagcacactcccagatgtcaaactaataccacccgaccaacccaagcggat 6948152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 12662375 - 12662287
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||||| || |||||| |||||||| |||||| || |||||||||||||| |    || |||| |||||||| |||| ||||||||||    
T  12662375 taaattggcattagagataatcgaacctgagacatcgaggaggagcacacttccgtatcacaagtcaataccatcagaccaacccaagt 12662287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 21549121 - 21549210
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||||||||| ||||||||||||||| | ||||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  21549121 aaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 21549210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 30883182 - 30883271
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| | |||||| |||||||||||||  |||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||    
T  30883182 aaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgg 30883271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 16773888 - 16773810
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||| |||| ||||||||||||| |||| |||||||    
T  16773888 agagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgg 16773810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 30109308 - 30109381
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||   ||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgg 30109381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 25627149 - 25627060
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||||||||| | ||  |||||||||||||| ||  ||||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgg 25627060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 34984898 - 34984809
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| | ||||||  |||||||||||||||| ||||  |||||||||||||| ||| ||||||||||||    
T  34984898 aaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 34984809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 21589381 - 21589291
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||| |||| ||||||||| |||||| || ||||| |||| ||||| ||||| |||||||||||||||||  ||||||||||||    
T  21589381 taaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgg 21589291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 29075874 - 29075784
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||| |||||||||||||| ||||| ||| |||||||||||||||| || || |||||||||||||| ||   |||||||||||    
T  29075874 taaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgg 29075784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8278271 - 8278348
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| |||| ||||||||| ||| |||||||||||||||| | ||| ||||||||||||| |||| ||||||||||||    
T  8278271 gagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgg 8278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 1410645 - 1410728
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||| | ||||||||||||| |||||||| |||||||||||||||| |  || |||| ||||||||||||| ||||||||    
T  1410645 aattgacaccacagagaatcgaact-gagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 37258350 - 37258422
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||| |||||||||||||| ||| ||||  ||||||||||||||||||| || ||||| ||||||||    
T  37258350 aaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccac 37258422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16457888 - 16457813
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| ||||||||  |||||||||||||||| ||||| |||||||||||||||||  ||||| ||||||    
T  16457888 gagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgg 16457813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 17028247 - 17028337
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||| ||||| ||| ||||||||  |||||||||||||||| | ||| ||| ||||||| || ||  ||||||||||||    
T  17028247 taaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgg 17028337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14285253 - 14285164
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||||||||| ||||  ||||||||| ||||  |  ||||||||||||    
T  14285253 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgg 14285164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14495801 - 14495874
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||| ||  ||||||||| |||||||||||||||| || || |||| ||||||||||||| ||||||||    
T  14495801 gagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 14495874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 18595985 - 18596074
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| ||||| |||||||| | ||||||  |||||||||||| ||| ||||| |||||||||||||| ||| ||| ||||||||    
T  18595985 aaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtgg 18596074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22020845 - 22020918
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||||| ||||||||||||  |||||| ||||||||||||||||||| || || ||||| ||||||||    
T  22020845 taaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccac 22020918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 43442288 - 43442216
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||  |||||||||||||| ||||||||  |||||||||||||||| || || ||| ||||||||||    
T  43442288 aaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccac 43442216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 43241679 - 43241754
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||| |||| |||||||||||||| | ||||||||| || || |||| ||||||||| ||| |||||||||||    
T  43241679 agagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 29173583 - 29173529
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactccta 59  Q
    ||||||||||| ||||| |||||||| ||| ||||| ||||||||||||||||||    
T  29173583 taaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactccta 29173529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 29210451 - 29210397
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactccta 59  Q
    |||||||| || ||||||||| |||||||| ||||| ||||||||||||||||||    
T  29210451 taaattgataccagagagaattgaacttgaaacctcgaggaggagcacactccta 29210397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 1279083 - 1279034
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacact 55  Q
    |||||||||| |||||||||| ||||||||||||| | ||||||||||||    
T  1279083 aaattgacaccagagagaatctaacttgagacctcgatgaggagcacact 1279034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 7918453 - 7918542
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| | ||||||  ||||||||  |||||| ||||  |||||||||||||| ||  ||||||||||||    
T  7918453 aaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgg 7918542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 26078035 - 26078124
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||||||||||||||||| ||||||||  | ||| |||| ||||| | ||| ||| |||||||||| ||  ||||||||||||    
T  26078035 aaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgg 26078124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 12883920 - 12883844
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||| |||| |||||||||||||||||||||||||| || || ||| | ||||||| |||  ||| |||||||    
T  12883920 gagagaattgaacatgagacctcaaggaggagcacactcccagatcccaacctaataccatcaggtcaatccaagtg 12883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 84902 - 84851
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagcca 71  Q
    ||||||||||||||||||||  |||||||||||||||| || || |||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 16172982 - 16173056
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  || ||||||||||||| ||||| |||||||| || |||||  ||||||||||||    
T  16172982 gagaatcgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacactaccaggccaacccaagtgg 16173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 16436692 - 16436622
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||| ||||||||  |||||||||||||||| | ||| |||||||||||||| ||  |||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactcc-aagtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 36958116 - 36958195
Alignment:
Q  16 tagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||| |||||| || | ||||| |||||||| |  || ||||||||| |||||| | ||||||||||||    
T  36958116 tagagagaatcgaacctgagacttcgatgaggaacacactcccaaatctcaagccaatcccaccatatcaacccaagtgg 36958195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 22737163 - 22737085
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| ||||||||| |||||| |   ||||||||||||| | | ||| |||||||||||||| ||| ||||||||||||    
T  22737163 agagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgg 22737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 4963983 - 4964040
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||||||||| | ||| | ||| |||||| |||||| ||||||||||||||    
T  4963983 agaatcgaacttgagactttaagaaagagtacactcgtaggtctcaagccaataccac 4964040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 29692406 - 29692455
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||||||||||||| || || ||| |||||||||||||| ||||||||    
T  29692406 aggaggagcacactcccagatcccaatccaataccaccagaccaacccaa 29692455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 12669565 - 12669517
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcaca 53  Q
    ||||||||||| |||||||||||||||||| |||| ||| || ||||||    
T  12669565 taaattgacaccagagagaatcgaacttgaaaccttaagaagaagcaca 12669517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 23301593 - 23301680
Alignment:
Q  13 cactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| | ||| |||| ||||||||||||  |||||||||||| ||||    
T  23301593 cactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggttga 23301680  T

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Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 15905658 - 15905747
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgga 96  Q
    ||||||||| ||| ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||| ||||  |||||||||||||    
T  15905658 aaattgacattagggagaatcgaacctgagacct-aaggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgga 15905747  T

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Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 43215265 - 43215187
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgg 43215187  T

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Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 2446388 - 2446311
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||||||| ||| |||||||||||||||| | ||| ||||||||||||| |||| ||||||||||||    
T  2446388 gagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgg 2446311  T

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Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 26459394 - 26459483
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 26459483  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 22760941 - 22760866
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  |||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgg 22760866  T

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Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 23552211 - 23552121
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| || ||||||||||||||||||||||||  |||||||||||||||| ||||| |||| ||||| ||| ||  ||||||||||||    
T  23552211 taaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgg 23552121  T

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Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 20335829 - 20335909
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||||||||| ||||||||| |||||||||||||||| | ||| |||||||||||| | ||| |||||||||||| ||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggttga 20335909  T

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Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 45229007 - 45229091
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacc 88  Q
    ||||||||||||| ||||||||||||| | | |||||||| || |||||||||||||||| ||| ||||||||| ||||| ||||    
T  45229007 ttaaattgacactggagagaatcgaacctaaaacctcaagaagaagcacactcctaggtcccaaaccaataccaacagaagaacc 45229091  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 48772013 - 48771941
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| |||||||||||||||||||||||||| || || ||||||||||||||||   ||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgg 48771941  T

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Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 18884403 - 18884481
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||||||||||||||| ||| || |||||||||| |||||  ||| ||||||||||| | |||||||||||||||    
T  18884403 gagaatcgaacttgagaccttaagaagaagcacactccgaggtccaaagtcaataccaccaaaccaacccaagtggatt 18884481  T

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Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 30579428 - 30579338
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||| ||||| |||||||| ||||||||  |||||| | ||||||| ||||| |||||||||||||||||  ||||||||||||    
T  30579428 taaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgg 30579338  T

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Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 15137645 - 15137556
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||||||| ||| ||||||||  ||||||||||||||||||  || |||| || |||||||||  ||||||||||||    
T  15137645 aaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgg 15137556  T

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Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 17040996 - 17041085
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| ||||||||||||| ||||||||  |||||||||||||| | || || ||||||||| |||| ||| ||||||||||||    
T  17040996 aaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgg 17041085  T

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Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 39631936 - 39631847
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||  ||||| ||||| |||||||||||||| ||  ||||||||||||    
T  39631936 aaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgg 39631847  T

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Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 7721461 - 7721389
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||| |||||||||||||| ||||||||  |||||||| ||||||| ||||| ||| ||||||||||    
T  7721461 aaattgacaccagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccac 7721389  T

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Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 41975981 - 41975937
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggagga 48  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  41975981 ttaaattgacactagagagaatcgaacttgagacctcaatgagga 41975937  T

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Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 43590998 - 43590914
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||| |||||| ||||||||||| |||||| |  |||||||||||||||| | ||| |||||||||||||||||  ||||||||    
T  43590998 aattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaa 43590914  T

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Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 5934214 - 5934147
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaa 72  Q
    ||||||||||| |||| ||||||||| ||| |||||||||||||||||||||| || || ||||||||    
T  5934214 taaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactcccagatcccaagccaa 5934147  T

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Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 37473707 - 37473652
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctag 60  Q
    |||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||    
T  37473707 taaattgacattagggagaatcgaacctgagacctcaaggaggagcaaactcctag 37473652  T

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Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 45976928 - 45976999
Alignment:
Q  27 gaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||| | |||| ||||||||||||||||| ||||| |||||||||||||| ||  |||||||||||||||    
T  45976928 gaacttaaaaccttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtggatt 45976999  T

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Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 7309449 - 7309397
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcc 57  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  7309449 ttaaattgacacg-gagagaatcgaacttgagacctcgaggaggagcacactcc 7309397  T

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Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9608613 - 9608690
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaa 83  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||| ||||||| || || |||||| ||||||| ||||    
T  9608613 aaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccactagaa 9608690  T

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Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9836185 - 9836262
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaa 83  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||| ||||||| || || |||||| ||||||| ||||    
T  9836185 aaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctataccactagaa 9836262  T

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Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 25590703 - 25590614
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||   ||| ||||||||  |||||||| |||||||||||||||| || || ||||||||||||| |||  ||||||||||||    
T  25590703 aaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgg 25590614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 33869429 - 33869518
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||||||||||||||  |||||||  || ||||||||||| | ||||| ||||||||||| || ||  ||||||||||||    
T  33869429 aaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgg 33869518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 42712051 - 42711962
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||||||||| ||||||||||| ||||||||  |||||||||||||||| | ||  ||||| |||||||| |   |||||||||||    
T  42712051 taaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 33222462 - 33222390
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||| |||||||||||||| ||||||||  |||| ||| ||||| | ||||| ||||||||||||||    
T  33222462 aaattgacaccagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccac 33222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 41519248 - 41519335
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||||||||||||||||  || |||| ||||||||| ||  ||||||||||    
T  41519248 taaattgacac-agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

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Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 43663091 - 43663171
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||| |||||| ||||| ||| ||||||| ||| |||||||||| |||| |||||||| |||  |||||||||||||||    
T  43663091 gagagattcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtggatt 43663171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 48125195 - 48125247
Alignment:
Q  43 ggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||    
T  48125195 ggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgg 48125247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 5579244 - 5579307
Alignment:
Q  32 tgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||  |||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||    
T  5579244 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgg 5579307  T

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Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 11720944 - 11721019
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    |||||| |||| | ||||||||||  ||| |||| ||||||||||||| ||| ||||| |||||||||||||||||    
T  11720944 aaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccaccag 11721019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 18056773 - 18056848
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  |||||||||||||||| | | | |||| |||||||||||||  |||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgg 18056848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 25132376 - 25132435
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacc 79  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||  ||| ||||||||||    
T  25132376 gagaatcgaacctgagaccttaagaaggagcacactcctaggtcctaagtcaataccacc 25132435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 31835284 - 31835189
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgat 101  Q
    |||||| ||| || || |||||||| ||||||||  |||||||||||||||| ||  | |||||||| ||||||||  |||||||||||| |||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggttgat 31835189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 33460405 - 33460496
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctc-aaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||  | ||||||||||  ||||||||  |||||||| |||||||||||||| ||| |||||||||||| | ||||||| ||||    
T  33460405 taaattgacaccggggagaatcgaatctgagaccttgaaggaggaccacactcctaggtcccaaaccaataccaccaaaccaacccaggtgg 33460496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 39499704 - 39499792
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||  || |||||||||| |||||||| || ||||| |||||||  ||||| |||||||||||||| ||  ||||||||||||    
T  39499704 taaattgacac--gaaagaatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgg 39499792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 21877886 - 21877828
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||| |||||||| |||||||||||| |||| ||||| |||| |||||||||    
T  21877886 gagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccac 21877828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 28236586 - 28236652
Alignment:
Q  27 gaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||| |||||||| ||||||||| |||||| ||||| ||||||||||||| || | ||||||||||    
T  28236586 gaactagagacctcgaggaggagcgcactcccaggtcccaagccaataccatcaaatcaacccaagt 28236652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 18363780 - 18363699
Alignment:
Q  14 actagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||| ||||||||  |||||||||||||||| |  || |||||| ||||||| ||  ||||||||||||    
T  18363780 actagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgg 18363699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 24513889 - 24513800
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||  || || |||||||| ||||||||||||||| || ||||||| |  || |||||||||||||| ||  ||||||||||||    
T  24513889 aaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgg 24513800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 25021355 - 25021408
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  25021355 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 25021408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 9122138 - 9122178
Alignment:
Q  12 acactagagagaatcgaacttgagacctcaaggaggagcac 52  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  9122138 acactagagagaatcaaacttgagacctaaaggaggagcac 9122178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 19553531 - 19553460
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaag 92  Q
    |||||| |||| | ||||||  |||||||||||||||| ||||| |||||||||||||||||  |||||||||    
T  19553531 gagaattgaacctaagaccttgaggaggagcacactcccaggtc-caagccaataccaccaggccaacccaag 19553460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 20952169 - 20952225
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||||||||||| ||||| ||| ||||||||| |||  |||||||||||||||    
T  20952169 aggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtggatt 20952225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 22035492 - 22035424
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaa 72  Q
    ||||||||||||  ||||||||||||| || | |||| |||||||||||||||  ||||| ||||||||    
T  22035492 ttaaattgacacaggagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaagccaa 22035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 23595785 - 23595733
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||||||||||||| || || |||| ||||||||||||| |||||||||||    
T  23595785 aggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtg 23595733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 23945954 - 23945906
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcaca 53  Q
    |||||||||| ||||||| ||||||| ||||||||||| ||||||||||    
T  23945954 taaattgacattagagaggatcgaacctgagacctcaatgaggagcaca 23945906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 30442567 - 30442491
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| | ||||||  |||||||||| ||||| ||||| ||||||||||||||  |  ||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgg 30442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 5668567 - 5668626
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    ||||||||||| | ||||||||| |||||||||||||| | | ||| |||||||||||||    
T  5668567 gagagaatcgatcctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 8108658 - 8108599
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||||| ||||||||||||||||||| |||||| |  || |||| |||||||||||    
T  8108658 agaatcgaacctgagacctcaaggaggagcgcactcccatatcccaagtcaataccacca 8108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 11765036 - 11765111
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||  ||||| |||||||||||||||||||| | |||  ||| ||||||||||| | ||||| |||||||||    
T  11765036 aatcgaatctgagatctcaaggaggagcacactcccacgtccaaagtcaataccaccaaatcaacctaagtggatt 11765111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 21558221 - 21558146
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||||| ||| |||||||||||||| ||||||||  |||||||||||| || |||||  |||| |||||| ||||    
T  21558221 taaattggcaccagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaatactacca 21558146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 30217969 - 30217922
Alignment:
Q  8 attgacactagagagaatcgaacttgagacctcaaggaggagcacact 55  Q
    |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  30217969 attgacactgaagagaatcgaacttgagaccttgaggaggagcacact 30217922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 38374597 - 38374672
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| | ||||||  |||||||||||||||  ||||| |||||||| |||||||   ||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgg 38374672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 5830586 - 5830672
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||||| |||||||||||| | ||  |||||||| ||||||| ||||  ||| |||||| |||  || ||||||||    
T  5830586 taaattgacactagagataatcgaacttgaaatcttgaggaggagtacactcccaggttccaaaccaatatcactggaccaacccaa 5830672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 7801253 - 7801183
Alignment:
Q  25 tcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||||||||  | |||||||||||||| ||||| |||| ||||||||||||  ||| ||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgg 7801183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 17113876 - 17113818
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||   ||||||||||    
T  17113876 agagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatac 17113818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 21570016 - 21570066
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    |||||||||| ||||| |||||||||||||||||  ||||||||| |||||    
T  21570016 aaattgacaccagagaaaatcgaacttgagaccttgaggaggagcgcactc 21570066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 38917186 - 38917098
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| || ||||||||||||||||| |||||||| |||||| | ||| ||| ||||  |||||||| ||| |||| |||||||    
T  38917186 taaattgacact-gaaagaatcgaacttgagacttcaaggagaagcaca-ttctaagtctcaagttaataccactagaccaactcaagtgg 38917098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 48039631 - 48039725
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    |||||| ||| || |||||| |||| ||||||||   | ||||||| ||||| || ||||||||||| ||||||||  |||||||||||| ||||    
T  48039631 aaattggcaccagggagaatagaacctgagaccttgcgaaggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggttga 48039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 2883043 - 2882986
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggt 62  Q
    ||||||| ||| ||||||||| |||| ||||||||  |||||||||||||||| ||||    
T  2883043 taaattgccaccagagagaattgaacctgagaccttgaggaggagcacactccaaggt 2882986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 4566411 - 4566504
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||| ||| |||||||||| ||| ||||||||  || ||||  ||||||| |||||  ||| ||||||||| ||  |||||||||||||||    
T  4566411 taaattggcaccagagagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaacccaagtggatt 4566504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 5273610 - 5273663
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||  ||||| |||||||| ||||||||  ||||||||||||    
T  5273610 aggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgg 5273663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24438226 - 24438303
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||| |||||||||| |||||||||||||  ||| |||| ||| | ||||||||||| | ||| ||| ||||||||||    
T  24438226 cattcaaattgacaccagagagaatcgaatctgaaaccttaagaaagagcacactcccaagtcccaaaccaataccac 24438303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 25242073 - 25241996
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||||  ||||||||| |||||||||| ||||  || || ||||  | |||||||||| |||||||||||||||    
T  25242073 agaatcgaatctgagacctcgaggaggagcatactctcagatctcaagatattaccaccagatcaacccaagtggatt 25241996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 29385727 - 29385816
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| | |||||||| ||| ||||||||  |||||||||||||||| | ||| |||||||| |||| | |  ||||||||||||    
T  29385727 aaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtgg 29385816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 33181194 - 33181279
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||| ||||||||| ||||| ||  ||  |||||||||||| | ||| |||||| ||||||| ||  ||||||||    
T  33181194 aaattgacactagagggaatcgaacctgagatcttgagttggagcacactcccaagtcccaagcctataccactagggcaacccaa 33181279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 42836021 - 42836074
Alignment:
Q  42 aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| ||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  42836021 aggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 42836074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 44628183 - 44628256
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||| |||||||||| |  |||||||||||||||| ||||| ||||| || | ||||||  ||||||||||||    
T  44628183 gaatcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggccaacccaagtgg 44628256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 45709704 - 45709777
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||| |||||||| ||||||||| |||||||||||||||  || || ||||| |||||||| ||  ||||||||    
T  45709704 gagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaa 45709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 3280494 - 3280558
Alignment:
Q  31 ttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||  |||||||||||||||   |||| ||||||||||||||||   ||||||||||||    
T  3280494 ttgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgg 3280558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 22932736 - 22932784
Alignment:
Q  47 gagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| |||||| ||||| |||||||||||||||| | ||||||||||||    
T  22932736 gagcgcactcccaggtcccaagccaataccaccataccaacccaagtgg 22932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 29785285 - 29785357
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| ||| |||||||||| ||||||||  |||||||||||||| | || || |||||| |||||||    
T  29785285 aaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcctataccac 29785357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 37085547 - 37085607
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||||||||| ||| ||||| |||| ||||||||||| |  || ||||||||||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccacca 37085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 41487436 - 41487365
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||||||||    |||||| ||||||| | ||| |||||||||||||||||  ||||||||||||    
T  41487436 agaatcgaacctgagacctt---gaggagaacactcccaagtcccaagccaataccaccaggccaacccaagtgg 41487365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 49050489 - 49050525
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  49050489 gagaatcgaacctgagacctcaaggaggagtacactc 49050525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 7799017 - 7799108
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| |||| ||||||||||||  ||||| ||| |||||||||||||||| | ||| ||||||||||||||||| |||||||||||||    
T  7799017 ttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgg 7799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 21213847 - 21213777
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaaccca 90  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 8162047 - 8162134
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| |||| ||  ||||| ||||| ||||||||||| | |||||||    
T  8162047 ttaaattgacactggagagaatccaacttgagacctcaaggaggaacacattctcaggtcccaagctaataccaccaggataacccaa 8162134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 19016109 - 19016034
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||||||||||||| |||||||||||||||| | ||| ||||||||||||| |||| ||||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgg 19016034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 35710484 - 35710394
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| |||| |||||||||||| ||||||||||| ||||| |||||||||| ||| |||| |||| |||||||| |||| |||||||    
T  35710484 taaattgatactacagagaatcgaacatgagacctcaaagaggaacacactcctaagtctcaagtcaatcccaccagatcaactcaagtgg 35710394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 42327392 - 42327468
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| ||||||||  |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 42327468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 33582066 - 33582015
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  33582066 taaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 37480153 - 37480078
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  |||||||||||||||  ||||| |||||||||||||||||  ||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgg 37480078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 39715070 - 39714995
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||| |||| |||||||||||   ||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgg 39714995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 12994376 - 12994446
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaag 92  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||| ||| |||| ||||    
T  12994376 gaatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaag 12994446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 3001460 - 3001383
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||| || |||| ||||||||| ||  |||||||||||    
T  3001460 agagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 7667453 - 7667550
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgatta 103  Q
    ||||||||| |||  |||||||| |  |||| |||||||||||||||||||| | ||| |||||||||| |||| || ||||||||||||||| ||||    
T  7667453 aaattgacattagtaagaatcgagccggagatctcaaggaggagcacactcccaagtcccaagccaatatcacccgaccaacccaagtggattaatta 7667550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19322860 - 19322771
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||||||||||||| |||  |||||||  | |||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||    
T  19322860 aaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgg 19322771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 40416374 - 40416463
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| |||||||| ||||||||||| ||||| ||||  |||| ||||||||| ||  ||||||||||||    
T  40416374 aaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgg 40416463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 13519036 - 13519084
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacac 54  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  13519036 aaattgaaattagagagaatcgaacttgagacctcaaggaggagcacac 13519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 30410533 - 30410605
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| ||| ||||| |||||||| |||| |||  |||||||||||||||||||||| ||||||||||||||    
T  30410533 aaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaataccac 30410605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 29503349 - 29503274
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  |||||||||||||||| ||||| ||| |||||||||| ||  ||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgg 29503274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 41504918 - 41505012
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattg 99  Q
    ||||||||||||  ||||||||||||   ||||  || |||||||||| ||||| ||||| ||||||||||||||| |||||| ||||||||||||    
T  41504918 ttaaattgacaccggagagaatcgaatcggagatatcgaggaggagcatactcccaggtcccaagccaataccacccgaacaa-ccaagtggattg 41505012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 42860424 - 42860365
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||| ||||| ||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccag 42860365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 13803576 - 13803502
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||| |||||||| ||||||||  |||||||||||||||||| ||| |||||||||| ||| ||| ||||||||    
T  13803576 agagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaa 13803502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 23052514 - 23052596
Alignment:
Q  13 cactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||||||||||| ||||||||  ||||| |||||||||| | ||| |||||||||||||||||  ||||| ||||||    
T  23052514 cactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgg 23052596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 24191932 - 24191842
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    ||||||||||||  | ||||||||| | ||||| |||||||||||||||||||  ||||| ||||||||||||| |||  |||| ||||||    
T  24191932 ttaaattgacaccggggagaatcgatcatgagatctcaaggaggagcacactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 29197375 - 29197449
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||| ||||||||||||||||||| | ||| |||| |||||||||||   ||||||||||||    
T  29197375 agaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgg 29197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 37755974 - 37756044
Alignment:
Q  25 tcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||| || ||||||||| ||| ||||| ||||||||||||||||   ||||||||||||    
T  37755974 tcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgg 37756044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 42922507 - 42922417
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctca-aggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||   |||||||||||||||| ||||  |||||||||||||| ||  ||||||||||||    
T  42922507 aaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 42922417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 11251180 - 11251107
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||| |||||||||| ||| ||||||||  |||||||||||||| | | ||| ||||||||||||||    
T  11251180 taaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccac 11251107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19244201 - 19244112
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||   ||||||||||||||  ||||| |||| ||||||||  ||| ||||||||||||    
T  19244201 aaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgg 19244112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 21195660 - 21195745
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||||||||| | ||  |||||| ||||||| ||  ||||||||    
T  21195660 aaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaa 21195745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 32687558 - 32687481
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||||| ||||||||| ||||||| |||||||  | ||| ||| | |||||||| |||||||||||||||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactctcaagtcccaaactaataccacaagaacaacccaagtggatt 32687481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26545919 - 26545843
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| ||||||||||||| || ||||||||||| | || || ||||| |||||||||| | ||||||||||||    
T  26545919 agagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaacccaagtgg 26545843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 28846766 - 28846694
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| |||||| || |||||||||||||||| ||||| |||| ||||||||| ||| ||||| ||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgg 28846694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 41908639 - 41908711
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||  |||||||||||||||| ||||| ||| || | ||||||||  ||||||||||||    
T  41908639 aatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgg 41908711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1435155 - 1435067
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||||||||||| ||||||||  ||||| ||||||||||||  || ||||||| |||||| |   ||||||||||||    
T  1435155 aaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgg 1435067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1729908 - 1729819
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||| ||  | ||||||  |||||||||||||||| | ||| |||||||||||||| ||  ||||||||||||    
T  1729908 aaattggcaccagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgg 1729819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 4060198 - 4060287
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||||||||||| ||||| ||  ||||| |||||||||  ||||  ||| |||||||||| ||  ||||||||||||    
T  4060198 aaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgg 4060287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7599978 - 7600039
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||||||| ||| ||||| ||||||||||||||| || ||| ||||||||| ||||||    
T  7599978 agagaatcgaacatgaaacctcgaggaggagcacactcttaagtctcaagccaatgccacca 7600039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 11062452 - 11062363
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| |||||||||| ||| ||||||||  ||||| |||||||||| | ||  |||||||||| ||| ||  ||||||||||||    
T  11062452 aaattgacacaagagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgg 11062363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 30359745 - 30359657
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| | |||||||||| | |||||||  |||||||||||||||| ||||| |||||||| |||||||   ||||||||||||    
T  30359745 aaattggcactggggagaatcgaaat-gagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 42602634 - 42602557
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| ||| | ||||||  || ||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 42602557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 3677335 - 3677411
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||||||| ||  ||||||||||||||| ||||||| ||||| |||| |||| ||| ||  |||||||||||||||    
T  3677335 ttaaattgataccggagagaatcgaacttaagacctcgaggagaagcatactcttagatcctaagccaataccacca 3677411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    ||||||||||||| ||||||||  |||||||||||||| | ||||| ||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 17737608 - 17737680
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||| |||||| || |||||||| ||||||||  |||||||||||||||| | ||| ||| ||||||||||    
T  17737608 aaattggcactagggataatcgaacatgagaccttgaggaggagcacactcccaagtcacaaaccaataccac 17737680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 18825415 - 18825344
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| ||||||||||||  || ||||||||||||||||||| |||||||| ||||||||   |||||||||||    
T  18825415 aatcaaacttgagaccttgag-aggagcacactcctaggtcccaagccaacaccaccaggtaaacccaagtgg 18825344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 30808644 - 30808720
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||  ||||||||  |||||||||| | ||  ||||| |||||||||| ||||||| ||||||||||||    
T  30808644 agagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgg 30808720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 3697421 - 3697472
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| |||| ||||| ||||||||||||| |||| ||||||||||||    
T  3697421 gaggagcactctccaaggtcccaagccaataccatcagaccaacccaagtgg 3697472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 12086129 - 12086188
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    |||||||||  |||||||  |||||||||||||| | ||||| |||||||||||||||||    
T  12086129 gaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccag 12086188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 26482170 - 26482096
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  || ||||||||||||||||||| |||||||| |||| |||  ||||| ||||||    
T  26482170 gagaatcgaacctgagaccttgag-aggagcacactcctaggtcccaagccaacaccatcaggccaacctaagtgg 26482096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 31573638 - 31573701
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccaga 82  Q
    |||||||||||| |||||| ||||||||||||||||||  || || ||| |||||| |||||||    
T  31573638 agagaatcgaacctgagacatcaaggaggagcacactctcagatctcaaaccaatatcaccaga 31573701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 4683285 - 4683211
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||| |||||||||| ||| ||||||||| |||||  ||||  ||| ||||||||||||| ||||| ||||||    
T  4683285 gagaattgaacttgagatctcgaggaggagcgcactctcaggtttcaaaccaataccaccaggacaactcaagtg 4683211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 16918573 - 16918651
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||| | ||||||  |||||||||||||||| || || ||| |||||||||| ||  ||||||||||||    
T  16918573 agagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgg 16918651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 39765026 - 39764988
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaag 43  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  39765026 taaattgacactagagggaatcgaacctgagacctcaag 39764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 2750610 - 2750659
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacact 55  Q
    |||||| |||||||||||||||||| ||||||||  |||| |||||||||    
T  2750610 aaattggcactagagagaatcgaacatgagaccttgaggaagagcacact 2750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14500369 - 14500280
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||  ||||||||  |||||||||||||||| || || |||||  ||||||| ||  ||| ||||||||    
T  14500369 aaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgg 14500280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 18259820 - 18259747
Alignment:
Q  8 attgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||||| |||||| | |||| ||||||||  |||||||||||||||  |  || |||||||||||||||||    
T  18259820 attgacactggagagagttgaacctgagacctataggaggagcacactctcaaatctcaagccaataccaccag 18259747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 45026835 - 45026782
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactccta 59  Q
    |||||| ||| |||||||||| ||| ||||||||  ||||||||||||||||||    
T  45026835 aaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactccta 45026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3660990 - 3661042
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||| | ||||||||||||| ||||| ||| |||||| ||||||||    
T  3660990 ttaaattgacatttgagagaatcgaacctgagatctcgaggaggggcacactc 3661042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 45742 - 45812
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatac 75  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||| ||||||    
T  45742 taaattgacaccagagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaatac 45812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 16852433 - 16852343
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||||  ||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  16852433 taaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 16852343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 968442 - 968365
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||  |||| |||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgg 968365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 19703472 - 19703560
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| ||||||||||| ||||||||  |||||||||||||||  ||||| |||||||||||||| ||  ||||||||||||    
T  19703472 aattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgg 19703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 6536613 - 6536540
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||| ||| ||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||||||||||    
T  6536613 taaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 29431090 - 29431009
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    |||||||||||| |||| ||||||||||||||||||||| | ||| |||||||||||| ||||  |||||||||||| ||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggttga 29431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 26688957 - 26688862
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgat 101  Q
    |||||||||||||  ||||  |||| ||||||||  |||||||||||||||| ||||| |||||||| ||||||||  |||||||||||| |||||    
T  26688957 aaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttgat 26688862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 28783138 - 28783063
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||||||||||   ||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgg 28783063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 40791877 - 40791960
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaac 87  Q
    |||||||||||||||||| |||||||| | |||| ||||||||||||||| ||  ||||| || |||||||||||||| |||||    
T  40791877 ttaaattgacactagagaaaatcgaacctaagacttcaaggaggagcacattctgaggtcccaggccaataccaccaggacaac 40791960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8485092 - 8485002
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| |||  ||||||||||||  ||||||||||| |||||||||||||  ||||| ||||| |||||||||||  ||||||||||||    
T  8485092 taaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgg 8485002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 23361632 - 23361722
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||| ||||||||| |||| ||||||||  |||||||||||||||| |  || |||| ||||||||||||  ||||||||||||    
T  23361632 taaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgg 23361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3624660 - 3624583
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||||||||  | |||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 3624583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 11819868 - 11819783
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||||||||| | ||| |||||| ||||||| ||  ||||||||    
T  11819868 aaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 11819783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 18540390 - 18540301
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  ||||| || ||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  18540390 aaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgg 18540301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 27750822 - 27750737
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||||||||| | ||| |||||| ||||||| ||  ||||||||    
T  27750822 aaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaa 27750737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 29858049 - 29858122
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| ||||||||| ||||||||||||||||  |||| |||||||||||||||||  ||| ||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgg 29858122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 34986191 - 34986099
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgat 101  Q
    ||||||||| ||| |||||||| |||| ||||||||||||||| |     |||| ||||| ||| ||||||||||||||||||||||||||| |||||    
T  34986191 ttaaattgatactggagagaattgaacctgagacctcaaggagta-----ctcccaggtcccaaaccaataccaccagaacaacccaagtgggttgat 34986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 35641897 - 35641974
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| |||||| || |||||||||||||||| |  || |||||| ||||||||||| ||||||||||||    
T  35641897 gagagaatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgg 35641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 44780098 - 44780187
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||| ||||| ||| ||||||||  |||||||||||||||| | ||| ||||||||| |||| ||  ||||||||||||    
T  44780098 aaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgg 44780187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 6436550 - 6436628
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| ||||||||  ||||||||   ||||||||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  6436550 agagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgg 6436628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 35690046 - 35690120
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||||||||||| |||||||||||||| ||||||||  |||||||||| || || || || ||||||||||||||    
T  35690046 ttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccac 35690120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 36205273 - 36205195
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    ||||||||||| ||||||||  |||||||||||||||| || || ||| |||||| || |||| |||||||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtggatt 36205195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 43968981 - 43969071
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| |||| ||||| |||||||  |||||||||| ||||||||||||||||| | | ||||||||||||| ||   ||||||||||||    
T  43968981 taaattaacaccagagataatcgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgccaacccaagtgg 43969071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6569755 - 6569844
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| | |||||||||||| ||| |||| ||||||||||||||||| || || |||||||||| ||| ||  ||||| ||||||    
T  6569755 aaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgg 6569844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 12281588 - 12281503
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaaccc 89  Q
    |||||||||||   |||| |||||||  ||||||||| |||||| ||||||||  ||||| |||||||||||||| ||||||||||    
T  12281588 ttaaattgacatcggagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagccaataccacaagaacaaccc 12281503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 31087238 - 31087331
Alignment:
Q  2 atttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||||  |||| |||||||| ||||||||| |||||| | | ||||| || || |||||||||| ||||  ||||||||||||||    
T  31087238 atttaaattgacaccggagataatcgaacctgagacctcgaggagggggatactcccagatcccaagccaatatcaccgaaacaacccaagtgg 31087331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 43594302 - 43594370
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    ||||||||||||||||||||||||| ||||||||  ||||||| |||| |||||| ||  |||||||||    
T  43594302 aaattgacactagagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaata 43594370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 2203558 - 2203495
Alignment:
Q  32 tgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||  |||||||||||||||| ||||| |||||||||||||| ||  ||||||||||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgg 2203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 5801121 - 5801050
Alignment:
Q  24 atcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||| || ||  ||||||||||||||| || ||||| |||||||||||  ||||||||||||    
T  5801121 atcgaacttgagacgtcgagacggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgg 5801050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 6530861 - 6530810
Alignment:
Q  44 gaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||||| |||||||| ||||||||  ||||||||||||    
T  6530861 gaggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgg 6530810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 34966851 - 34966926
Alignment:
Q  23 aatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||| ||||||||||||| | ||| |||||||||| | ||| ||||||||||||| |||| |||| ||||||||||    
T  34966851 aatcaaacttgagacctcgaagagtagcacactcccaagtctcaagccaataccatcagaccaactcaagtggatt 34966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 11492057 - 11492127
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacc 76  Q
    |||||||||||  |||||||||||| | ||||||| || ||||||||||||| || || ||||||||||||    
T  11492057 aaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatacc 11492127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33017306 - 33017217
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||||||| | ||||  ||||||||||  || ||  ||||||||||||    
T  33017306 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgg 33017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 33727857 - 33727906
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacact 55  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||||||||||    
T  33727857 aaattgacactagagggaatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 15948031 - 15948107
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||| ||||||| ||||||||||||| |  ||| || |||||||||| ||||| | ||| ||||||||||||||||    
T  15948031 ttaaaatgacactggagagaatcgaacctatgacatcgaggaggagcatactcccaagtcccaagccaataccacca 15948107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 31408104 - 31408156
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||| ||||||||||||||| ||| ||||  |||||||||||||||    
T  31408104 ttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 33692315 - 33692374
Alignment:
Q  34 agacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtg 94  Q
    |||||| |||||||||||| |||||| ||| |||||||||||||||| | |||||||||||    
T  33692315 agaccttaaggaggagcac-ctcctatgtctcaagccaataccaccaaaccaacccaagtg 33692374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 5264610 - 5264547
Alignment:
Q  32 tgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||| |||||||||||| ||| ||||  |||||||||||||| ||  ||||||||||||    
T  5264610 tgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgg 5264547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 7140789 - 7140726
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||||||||  ||||| ||| ||||||||||||| || || || |||||||||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaataccaccag 7140726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 18546360 - 18546443
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattgatta 103  Q
    ||||||||||| ||||||||| ||||||||||  |||  ||||| |||  ||||||||| ||| ||||| ||||||||| ||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtggattaatta 18546443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 8794327 - 8794401
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||  || |||||||||||||| |||||||   |||||||||||||| | ||||  ||||||||||||||    
T  8794327 ttaaattggtaccagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccac 8794401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 11793520 - 11793594
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| | ||||||  |||||||||||||||| ||||| ||||| || ||||| ||| ||||||||||||    
T  11793520 agaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaacccaagtgg 11793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 18030253 - 18030187
Alignment:
Q  25 tcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||| |||||  || |||||||||||| ||| ||| ||||||||||||||||||||  |||||||    
T  18030253 tcgaacctgagatatcgaggaggagcacattccgaggccgcaagccaataccaccagactaacccaa 18030187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 18897243 - 18897169
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||| ||||||||  |||||||||||||||  ||||| ||| |||| ||||| ||  ||||||||||||    
T  18897243 agaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgg 18897169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 23874366 - 23874455
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||| ||||||  |||| ||||| ||||||||| |||||| ||| | ||| ||||| |||||||||||||| ||  ||||||||||||    
T  23874366 taaattgtcactaggaagaa-cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgg 23874455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30483863 - 30483965
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    |||| |||||| ||| ||||||||| |||| ||||||    |||||||||||||||| |  || ||||||||||||||  |  |||||||||||| ||||    
T  30483863 cattcaaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggttga 30483962  T
Q  101 tta 103  Q
    |||    
T  30483963 tta 30483965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 12988520 - 12988431
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||| ||| |||||| ||||||| ||| ||||  |||||||||||||| | ||||  |||||||||||||| ||  ||| ||||||||    
T  12988520 aaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgg 12988431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 20994479 - 20994536
Alignment:
Q  43 ggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||||||||||||| ||||| |||| ||||||||| ||  |||||||||||| ||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggttga 20994536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 22268930 - 22269006
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||| |||| ||||||||||||  || || |||||||||| ||||| |||||||| ||||||||  ||||||||||||    
T  22268930 gagaaaatcaaacttgagaccttgagaag-agcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 22269006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 24351725 - 24351762
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  24351725 agagaattgaacttgagacctcaaggaggagtacactc 24351762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 28560691 - 28560607
Alignment:
Q  13 cactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||||||||||||||||| |||| | | ||  ||||||||||||  ||||| ||| |||||||||| ||  |||||||||||||||    
T  28560691 cactagagagaatcgaacatgagccttgaaa-aggagcacactctaaggtcccaaaccaataccactagttcaacccaagtggatt 28560607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 35287796 - 35287719
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||||||||||| ||| ||||  |||||||||||||||| |  || |||||||| ||||||||  | ||||||||||    
T  35287796 gagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgg 35287719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 3058046 - 3058118
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||||||||| ||||||||    |||||||||||||| | | | ||| |||||||||||||| ||||||||    
T  3058046 agagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaa 3058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 3826774 - 3826850
Alignment:
Q  19 agagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||| ||||| |||  ||||||||||||||  |  | ||||||||||||||| ||  ||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgg 3826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 36043072 - 36042984
Alignment:
Q  7 aattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    ||||| |||| || |||||||||| ||||| || | |||||| |||||||| | |   |||||||||||||||||  ||||||||||||    
T  36043072 aattggcactggaaagaatcgaacctgagatcttacggaggaacacactcccaagatccaagccaataccaccagcccaacccaagtgg 36042984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38881 - 38978
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||| ||||||||||  |||| |||||||| ||||| || || || ||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  38881 cattcaaattgacaccggagaaaatcgaacgtgagatcttaaagatgagcatactcctaggtcccaagccaataccaccagaccaacccaagtggatt 38978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 7725 - 7797
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagt 93  Q
    ||||||||||||||||||| |||||||||||||||   ||||| |||||||||||||||||| ||||||||||    
T  7725 agaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagt 7797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 11620 - 11545
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||| |||| |||||||||||||| ||||||||| |||||||||||||||| || || |||||||||||||||||    
T  11620 aaattaacaccagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccag 11545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 19846 - 19902
Alignment:
Q  21 agaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaatacca 77  Q
    ||||||||||||||||||||||||||||||| ||||| || || |||||||||||||    
T  19846 agaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaatacca 19902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 145913 - 145965
Alignment:
Q  22 gaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaata 74  Q
    ||||||||  ||||||||| || ||||||||||||||||||| ||| ||||||    
T  145913 gaatcgaatctgagacctcgagaaggagcacactcctaggtcccaaaccaata 145965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 832 - 899
Alignment:
Q  14 actagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||||||||||||| |||||| || |||||||||||| ||| || || |||||||||||||||||    
T  832 actagagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccag 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 94953 - 95044
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||| ||| ||||| ||| |||| ||||||||  |||||||||||||||| ||||  |||||||||||||| ||  ||||||||||||    
T  94953 ttaaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 13042 - 13104
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    ||||||||||||| ||||||||  |||||||||||||||| || || ||||||||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccacca 13104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25326 - 25403
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    |||| |||||||||| ||||| |||||||| ||||||||  || ||||||||||||| | ||| ||||||||||||||    
T  25326 cattcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccac 25403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 41617 - 41706
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||  ||||||||| |||| ||||||||| |||||||||| ||||  || || |||||||||||||| ||  ||||||||||||    
T  41617 aaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgg 41706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 19946 - 20018
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||| |||| |||||||||||||| ||||||||  |||||||||| ||||| ||||  ||||||||||||||    
T  19946 aaattaacaccagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccac 20018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 2907 - 2982
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtgg 95  Q
    |||||||||||||||||||| |||||||| |||||| | ||||| ||| |||| |||||||   ||||||||||||    
T  2907 gagaatcgaacttgagaccttaaggaggatcacacttcaaggtcccaaaccaaaaccaccaagccaacccaagtgg 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 112375 - 112280
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggattga 100  Q
    ||||||| |||  ||||||||||||| | ||||||||| ||||| |||||||| || |  ||||||||||| |||||  |||||||||||| ||||    
T  112375 taaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggttga 112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 43316 - 43390
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||||||  || ||||||||| |||||||| ||| |||| |||||||| | ||| ||||||||||||||||    
T  43316 aaattgacactgaagggaatcgaacatgagaccttaagaaggaacacactcccaagtcccaagccaataccacca 43390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 2468 - 2539
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||||||| ||||||||  |||||||||||||||| || ||  || ||||||||||| || ||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaa 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 14947 - 15005
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggt 62  Q
    |||||||| |||  ||||||||| ||  ||||||||| |||||||||||||||||||||    
T  14947 ttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcctaggt 15005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 106140 - 106066
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacca 80  Q
    |||||||||  |||||||||||||||| |||| || || || ||||||||||  |||| ||||| ||||||||||    
T  106140 aaattgacataagagagaatcgaactttagacttcgagaagcagcacactccctggtcccaagctaataccacca 106066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 157000 - 157056
Alignment:
Q  35 gacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||| |||||||||||||||| || || ||||||||||||| |||  ||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 157056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 162992 - 163078
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    |||||||||||  ||||||||||||| | |||||| | ||||||||||||||  |||||  ||| ||| ||||| ||| ||||||||    
T  162992 taaattgacaccggagagaatcgaacctcagaccttatggaggagcacactctcaggtcataagtcaaaaccactagaccaacccaa 163078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 320135 - 320049
Alignment:
Q  5 taaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaa 91  Q
    ||||||| ||| || || ||||||||||||||||| || || || ||||||| |||||| ||| ||||||| |||| | ||||||||    
T  320135 taaattggcaccagcgataatcgaacttgagaccttaatgaagaacacactcttaggtcccaatccaatactaccacaccaacccaa 320049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0955 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3559 - 3463
Alignment:
Q  1 catttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccagaacaacccaagtggatt 98  Q
    |||| ||||||||||  |||| |||||||| ||||| || ||  | ||||| ||| ||||||| ||||||||||||||| |  |||||||||||||||    
T  3559 cattcaaattgacaccggagaaaatcgaacgtgagatcttaaa-atgagcatacttctaggtcccaagccaataccacccggccaacccaagtggatt 3463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 2695 - 2748
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactccta 59  Q
    |||||| ||| |||||||||||||| ||||||||  |||||||||| |||||||    
T  2695 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcagactccta 2748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 10812 - 10872
Alignment:
Q  18 gagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccacc 79  Q
    |||| ||| |||| |||||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  10812 gagataattgaacctgagacctgaaggaggagcacactcctaagtc-caagccaatatcacc 10872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 15775 - 15836
Alignment:
Q  20 gagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccaccag 81  Q
    ||||||| ||||||||||||  |||||||||| ||||| |  || |||||||||||||||||    
T  15775 gagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccaccag 15836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 35384 - 35445
Alignment:
Q  17 agagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||| |||||||||| ||||||  |||||||||| |||||||| |  ||||||||||||||    
T  35384 agagataatcgaacttaagaccttgaggaggagcatactcctagattccaagccaataccac 35445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 4432 - 4360
Alignment:
Q  6 aaattgacactagagagaatcgaacttgagacctcaaggaggagcacactcctaggtcgcaagccaataccac 78  Q
    ||||||||||||||| ||||||||| | | |||| ||| ||||||||||||| |  || |||||| |||||||    
T  4432 aaattgacactagagggaatcgaacctaaaaccttaagaaggagcacactcccaaatcccaagcctataccac 4360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 49400 - 49348
Alignment:
Q  4 ttaaattgacactagagagaatcgaacttgagacctcaaggaggagcacactc 56  Q
    ||||||||||||  ||||||||||||| ||| ||||| | |||||||||||||    
T  49400 ttaaattgacaccggagagaatcgaacctgatacctcgaagaggagcacactc 49348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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