View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17795_high_42 (Length: 291)
Name: NF17795_high_42
Description: NF17795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17795_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 37860022 - 37859842
Alignment:
| Q |
1 |
gacccacccatttcactcctcattcatctccattcctctcttctcaaccctctaattttctcccttatccttacaaacctaatcttcaatttcatttcaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37860022 |
gacccacccatttcactcctcattcatctccattcctctcttctcaaccctctaattttctcccttatccttacaaacctaatcttcaatttcatttcaa |
37859923 |
T |
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| Q |
101 |
acaacaacnnnnnnnccaataaccaaaccatgccttttgcttaacactctccaaaatttgctctcacctcataacatcctca |
182 |
Q |
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|||||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859922 |
acaacaac-aaaaaaccaataaccaaaccatgtctttggtttaacactctccaaaatttgctctcacctcataacatcctca |
37859842 |
T |
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