View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17795_high_65 (Length: 202)
Name: NF17795_high_65
Description: NF17795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17795_high_65 |
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Alignment Details
Target: chr5 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 7342137 - 7342242
Alignment:
| Q |
15 |
cacagaatttggaaatcgatgtattattaagaagagggaatctgttttgccaatttgtcggtattttcttatggttcacataacgactaaacataaacaa |
114 |
Q |
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| T |
7342137 |
cacagaatttggaaatcgatgtatttttaagaagagggaatctgttttgccaatttgtcggtattttcttatgattcacataacgactaaacataaacca |
7342236 |
T |
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| Q |
115 |
tgaagc |
120 |
Q |
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|||||| |
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| T |
7342237 |
tgaagc |
7342242 |
T |
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