View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17795_low_32 (Length: 343)

Name: NF17795_low_32
Description: NF17795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17795_low_32
NF17795_low_32
[»] chr5 (40 HSPs)
chr5 (38-298)||(39132773-39133033)
chr5 (1-41)||(26593283-26593323)
chr5 (1-41)||(38964117-38964157)
chr5 (1-39)||(39002030-39002068)
chr5 (1-41)||(6252070-6252110)
chr5 (299-343)||(6500588-6500632)
chr5 (1-41)||(6600139-6600179)
chr5 (1-41)||(8215998-8216038)
chr5 (1-41)||(11000731-11000771)
chr5 (1-41)||(11692150-11692190)
chr5 (1-41)||(14717703-14717743)
chr5 (1-41)||(16095963-16096003)
chr5 (1-41)||(20408631-20408671)
chr5 (1-41)||(27457200-27457240)
chr5 (1-41)||(30297752-30297792)
chr5 (1-41)||(30863351-30863391)
chr5 (1-41)||(33760473-33760513)
chr5 (1-39)||(1052631-1052669)
chr5 (301-343)||(6500960-6501002)
chr5 (1-39)||(43166274-43166312)
chr5 (1-38)||(41282440-41282477)
chr5 (1-41)||(3352005-3352045)
chr5 (1-41)||(6739958-6739998)
chr5 (1-41)||(8689670-8689710)
chr5 (1-41)||(11935543-11935583)
chr5 (1-41)||(19659504-19659544)
chr5 (1-41)||(23128916-23128956)
chr5 (1-41)||(28078408-28078448)
chr5 (1-41)||(31710380-31710420)
chr5 (1-39)||(40075048-40075086)
chr5 (1-39)||(42993616-42993654)
chr5 (1-38)||(19398199-19398236)
chr5 (1-34)||(27116109-27116142)
chr5 (299-343)||(1028493-1028537)
chr5 (1-41)||(4015877-4015917)
chr5 (1-41)||(6332874-6332914)
chr5 (1-41)||(14952422-14952462)
chr5 (1-41)||(20079261-20079301)
chr5 (5-41)||(35342282-35342318)
chr5 (1-41)||(39824654-39824694)
[»] scaffold0693 (1 HSPs)
scaffold0693 (1-41)||(5030-5070)
[»] chr8 (31 HSPs)
chr8 (1-41)||(260075-260115)
chr8 (1-41)||(655806-655846)
chr8 (1-41)||(841541-841581)
chr8 (40-135)||(26058964-26059057)
chr8 (1-41)||(36400073-36400113)
chr8 (1-41)||(43806536-43806576)
chr8 (1-41)||(513405-513445)
chr8 (1-41)||(2533370-2533410)
chr8 (1-41)||(15847210-15847250)
chr8 (1-41)||(23972298-23972338)
chr8 (1-41)||(38107197-38107237)
chr8 (1-41)||(38208851-38208891)
chr8 (1-41)||(40301896-40301936)
chr8 (1-41)||(41536530-41536570)
chr8 (1-38)||(22683994-22684031)
chr8 (1-41)||(440938-440978)
chr8 (1-41)||(1293584-1293624)
chr8 (1-41)||(3876006-3876046)
chr8 (1-41)||(24193133-24193173)
chr8 (1-41)||(28496358-28496398)
chr8 (1-41)||(35443409-35443449)
chr8 (1-41)||(35884433-35884473)
chr8 (1-41)||(37933740-37933780)
chr8 (5-39)||(8137240-8137274)
chr8 (1-39)||(9056343-9056381)
chr8 (1-41)||(4649248-4649288)
chr8 (1-41)||(13797186-13797226)
chr8 (5-41)||(24430574-24430610)
chr8 (1-41)||(33651939-33651979)
chr8 (1-41)||(38633713-38633753)
chr8 (310-342)||(41129127-41129159)
[»] chr7 (35 HSPs)
chr7 (1-41)||(33884417-33884457)
chr7 (1-41)||(35600125-35600165)
chr7 (1-41)||(221373-221413)
chr7 (1-41)||(1469496-1469536)
chr7 (1-41)||(2960643-2960683)
chr7 (1-41)||(11476559-11476599)
chr7 (1-41)||(23842403-23842443)
chr7 (1-41)||(30971944-30971984)
chr7 (1-41)||(42888947-42888987)
chr7 (1-41)||(44544507-44544547)
chr7 (1-41)||(47219243-47219283)
chr7 (2-41)||(37394001-37394040)
chr7 (1-39)||(8162717-8162755)
chr7 (1-38)||(29248440-29248477)
chr7 (1-38)||(41113475-41113512)
chr7 (1-41)||(11050264-11050304)
chr7 (1-41)||(30798371-30798411)
chr7 (1-41)||(30876357-30876397)
chr7 (1-41)||(31684137-31684177)
chr7 (1-41)||(38427566-38427606)
chr7 (1-41)||(43752779-43752819)
chr7 (1-41)||(43968262-43968302)
chr7 (1-41)||(47272079-47272119)
chr7 (1-41)||(47281127-47281167)
chr7 (1-41)||(47294294-47294334)
chr7 (1-41)||(48628903-48628943)
chr7 (1-39)||(4923314-4923352)
chr7 (298-343)||(30244490-30244534)
chr7 (298-343)||(30253708-30253752)
chr7 (299-343)||(1085593-1085636)
chr7 (299-343)||(7517984-7518028)
chr7 (1-41)||(18353242-18353282)
chr7 (1-41)||(40851372-40851412)
chr7 (1-41)||(42979341-42979381)
chr7 (9-41)||(45723494-45723526)
[»] chr4 (49 HSPs)
chr4 (1-41)||(25730338-25730378)
chr4 (1-41)||(55517188-55517228)
chr4 (1-38)||(37381944-37381981)
chr4 (1-41)||(5227488-5227528)
chr4 (1-41)||(10588678-10588718)
chr4 (1-41)||(11795157-11795197)
chr4 (1-41)||(26017521-26017561)
chr4 (1-41)||(28264741-28264781)
chr4 (1-41)||(28812290-28812330)
chr4 (1-41)||(31208842-31208882)
chr4 (1-41)||(31591173-31591213)
chr4 (1-41)||(33807783-33807823)
chr4 (1-41)||(42273900-42273940)
chr4 (1-41)||(48551767-48551807)
chr4 (1-41)||(49118709-49118749)
chr4 (1-41)||(50276141-50276181)
chr4 (1-38)||(9339129-9339166)
chr4 (1-38)||(12196567-12196604)
chr4 (1-38)||(48707739-48707776)
chr4 (5-41)||(2055380-2055416)
chr4 (1-41)||(4544988-4545028)
chr4 (1-41)||(14564894-14564934)
chr4 (1-41)||(15985108-15985148)
chr4 (1-41)||(17847099-17847139)
chr4 (1-41)||(17993020-17993060)
chr4 (1-41)||(20534263-20534303)
chr4 (1-41)||(23135009-23135049)
chr4 (1-41)||(24458634-24458674)
chr4 (1-41)||(30141111-30141151)
chr4 (1-41)||(30467006-30467046)
chr4 (1-41)||(31973689-31973729)
chr4 (1-41)||(32118812-32118852)
chr4 (1-41)||(33693336-33693376)
chr4 (1-41)||(35930137-35930177)
chr4 (5-41)||(40988735-40988771)
chr4 (1-41)||(44490417-44490457)
chr4 (1-41)||(51371050-51371090)
chr4 (1-39)||(19496107-19496145)
chr4 (1-38)||(25734229-25734266)
chr4 (1-38)||(28159959-28159996)
chr4 (1-38)||(32318051-32318088)
chr4 (5-41)||(8882016-8882052)
chr4 (299-343)||(10246057-10246101)
chr4 (1-41)||(22298616-22298656)
chr4 (9-41)||(23553170-23553202)
chr4 (1-41)||(33174023-33174063)
chr4 (1-41)||(39995170-39995210)
chr4 (1-41)||(48149597-48149637)
chr4 (1-41)||(50542357-50542397)
[»] chr3 (39 HSPs)
chr3 (1-41)||(20760074-20760114)
chr3 (1-41)||(35346474-35346514)
chr3 (1-41)||(38446574-38446614)
chr3 (1-41)||(1017142-1017182)
chr3 (1-41)||(1687749-1687789)
chr3 (1-41)||(21564594-21564634)
chr3 (1-41)||(26455680-26455720)
chr3 (1-41)||(27070742-27070782)
chr3 (1-41)||(31122760-31122800)
chr3 (1-41)||(40922168-40922208)
chr3 (1-41)||(42016971-42017011)
chr3 (1-41)||(44798365-44798405)
chr3 (1-41)||(50287664-50287704)
chr3 (91-145)||(5371786-5371840)
chr3 (1-39)||(19664639-19664677)
chr3 (1-39)||(36314977-36315015)
chr3 (1-39)||(41250984-41251022)
chr3 (1-41)||(20813444-20813484)
chr3 (1-41)||(21656616-21656656)
chr3 (1-41)||(33151794-33151834)
chr3 (1-41)||(37248054-37248094)
chr3 (1-41)||(42107102-42107142)
chr3 (1-41)||(47329178-47329218)
chr3 (1-41)||(48651346-48651386)
chr3 (1-36)||(12748489-12748524)
chr3 (2-41)||(44152772-44152811)
chr3 (5-39)||(55164120-55164154)
chr3 (1-38)||(3697244-3697281)
chr3 (299-343)||(22304331-22304376)
chr3 (1-38)||(22852094-22852131)
chr3 (1-38)||(53925985-53926022)
chr3 (1-41)||(20086317-20086357)
chr3 (5-41)||(20913757-20913793)
chr3 (5-41)||(20921875-20921911)
chr3 (1-41)||(33473242-33473282)
chr3 (1-41)||(35608134-35608174)
chr3 (5-41)||(39069828-39069864)
chr3 (299-343)||(41359467-41359511)
chr3 (1-41)||(53196112-53196152)
[»] chr2 (33 HSPs)
chr2 (1-41)||(7297237-7297277)
chr2 (1-41)||(2094413-2094453)
chr2 (1-41)||(9276672-9276712)
chr2 (1-41)||(11949429-11949469)
chr2 (1-41)||(14630712-14630752)
chr2 (1-41)||(16246196-16246236)
chr2 (1-41)||(17134327-17134367)
chr2 (1-41)||(17484553-17484593)
chr2 (1-41)||(27328682-27328722)
chr2 (1-41)||(28650429-28650469)
chr2 (1-41)||(34253240-34253280)
chr2 (1-41)||(37838395-37838435)
chr2 (1-41)||(40854707-40854747)
chr2 (1-39)||(2314980-2315018)
chr2 (1-39)||(2456108-2456146)
chr2 (1-38)||(771981-772018)
chr2 (5-41)||(921124-921160)
chr2 (1-41)||(2057024-2057064)
chr2 (1-37)||(3430631-3430667)
chr2 (1-41)||(7379061-7379101)
chr2 (1-33)||(8899780-8899812)
chr2 (1-41)||(12759753-12759793)
chr2 (1-41)||(33865270-33865310)
chr2 (1-41)||(36444231-36444271)
chr2 (1-41)||(41500505-41500545)
chr2 (1-41)||(45124217-45124257)
chr2 (5-39)||(28216969-28217003)
chr2 (1-41)||(9331854-9331894)
chr2 (1-41)||(19180519-19180559)
chr2 (1-41)||(33106972-33107012)
chr2 (1-41)||(37732196-37732236)
chr2 (1-41)||(38751146-38751186)
chr2 (299-343)||(41283451-41283495)
[»] chr1 (46 HSPs)
chr1 (1-41)||(19315738-19315778)
chr1 (1-41)||(23767417-23767457)
chr1 (1-41)||(7553019-7553059)
chr1 (5-41)||(7651764-7651800)
chr1 (1-41)||(18892427-18892467)
chr1 (1-41)||(24204474-24204514)
chr1 (1-41)||(25988274-25988314)
chr1 (1-41)||(26069990-26070030)
chr1 (1-41)||(37216994-37217034)
chr1 (1-41)||(41106114-41106154)
chr1 (1-41)||(46095078-46095118)
chr1 (1-41)||(48802334-48802374)
chr1 (1-41)||(49094714-49094754)
chr1 (1-41)||(50690041-50690081)
chr1 (3-41)||(48669399-48669437)
chr1 (1-38)||(5400968-5401005)
chr1 (1-41)||(9878787-9878827)
chr1 (1-41)||(12143170-12143210)
chr1 (1-41)||(21929624-21929664)
chr1 (1-41)||(23228197-23228237)
chr1 (1-41)||(26549486-26549526)
chr1 (1-41)||(28425366-28425406)
chr1 (1-41)||(33325825-33325865)
chr1 (1-41)||(36781175-36781215)
chr1 (1-41)||(38473629-38473669)
chr1 (5-41)||(41982238-41982274)
chr1 (1-41)||(46051548-46051588)
chr1 (1-41)||(46825629-46825669)
chr1 (1-41)||(49814398-49814438)
chr1 (1-41)||(52349927-52349967)
chr1 (299-341)||(45084576-45084617)
chr1 (5-38)||(18782095-18782128)
chr1 (4-41)||(36157681-36157718)
chr1 (1-41)||(6711538-6711578)
chr1 (5-41)||(7608769-7608805)
chr1 (9-41)||(8141489-8141521)
chr1 (1-41)||(9962849-9962889)
chr1 (1-41)||(16705968-16706008)
chr1 (9-41)||(18917630-18917662)
chr1 (1-41)||(19274657-19274697)
chr1 (1-41)||(33674115-33674155)
chr1 (1-41)||(34971178-34971218)
chr1 (5-41)||(40721445-40721481)
chr1 (299-343)||(44290800-44290844)
chr1 (1-41)||(50533481-50533521)
chr1 (1-41)||(52147091-52147131)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-41)||(218984-219024)
[»] chr6 (19 HSPs)
chr6 (1-41)||(2598102-2598142)
chr6 (1-41)||(3408287-3408327)
chr6 (1-41)||(10256335-10256375)
chr6 (1-41)||(12612974-12613014)
chr6 (1-41)||(29050370-29050410)
chr6 (1-41)||(30379115-30379155)
chr6 (1-39)||(1915348-1915386)
chr6 (1-41)||(1077335-1077375)
chr6 (1-41)||(2390363-2390403)
chr6 (1-41)||(2707557-2707597)
chr6 (1-41)||(6503816-6503856)
chr6 (1-41)||(8178252-8178292)
chr6 (1-41)||(12626734-12626774)
chr6 (1-41)||(17428275-17428315)
chr6 (5-41)||(31376019-31376055)
chr6 (310-342)||(2578822-2578854)
chr6 (1-41)||(11133972-11134012)
chr6 (1-41)||(17943134-17943174)
chr6 (1-41)||(25820552-25820592)
[»] scaffold0184 (1 HSPs)
scaffold0184 (9-41)||(13201-13233)
[»] scaffold0078 (1 HSPs)
scaffold0078 (9-41)||(59611-59643)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-41)||(252441-252481)
[»] scaffold1986 (1 HSPs)
scaffold1986 (1-41)||(212-252)
[»] scaffold0727 (1 HSPs)
scaffold0727 (9-41)||(5291-5323)


Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 38 - 298
Target Start/End: Original strand, 39132773 - 39133033
Alignment:
Q  38 acgagctactatgggtacttcgttcatggttatgggaagattaccagacttgtgaatcagttgttaagagatggcgttgtatggaataaggaaatgcagg 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39132773 acgagctactatgggtacttcgttcatggttatgggaagattaccagacttgtgaatcagttgttaggagatggcgttgtatggaataaggaaatgcagg 39132872  T
Q  138 cagcatttgaaaacaggtcaaaaatatannnnnnncccaaccaatgtttgaatgtcattattatttattagtcctatttgaaagaaggcatggctctatg 237  Q
    ||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39132873 cagcatttgaaaacaggtcaaaaatatatttttttcccaaccaatgtttgaatgccattattatttattagtcctatttgaaagaaggcatggctctatg 39132972  T
Q  238 cagttgtgtagtgctatttagtatttactctctaagcatcttttcaatttaataatgaact 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39132973 cagttgtgtagtgctatttagtatttactctctaagcatcttttcaatttaataatgaact 39133033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26593323 - 26593283
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26593323 ttaccaactatgctatctacaatatgacttgtttgaaacga 26593283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38964157 - 38964117
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38964157 ttaccaactatgctatctacaatatgacttgtttgaaacga 38964117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39002068 - 39002030
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39002068 ttaccaactatgctatctacaatatgacttgtttgaaac 39002030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6252070 - 6252110
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  6252070 ttaccaactatgctatctacaataggacttgtttgaaacga 6252110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 6500632 - 6500588
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  6500632 tgttgggtaagtgaggggagcctgggggaccgtccacatcgaggc 6500588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6600179 - 6600139
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  6600179 ttaccaactatgctatctacaataggacttgtttgaaacga 6600139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8215998 - 8216038
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  8215998 ttaccaactatgctatctacaataggacttgtttgaaacga 8216038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11000771 - 11000731
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  11000771 ttaccaactatgctatctacaataggacttgtttgaaacga 11000731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11692190 - 11692150
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  11692190 ttaccaactatgctatctgcaatatgacttgtttgaaacga 11692150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14717703 - 14717743
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  14717703 ttaccaactatgctatctacaataggacttgtttgaaacga 14717743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16096003 - 16095963
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  16096003 ttaccaactatgctatctacaataggacttgtttgaaacga 16095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20408631 - 20408671
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  20408631 ttaccaactatgctatctacaataggacttgtttgaaacga 20408671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27457240 - 27457200
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  27457240 ttaccaactatgttatctacaatatgacttgtttgaaacga 27457200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30297792 - 30297752
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  30297792 ttaccaactatgctatctacaataggacttgtttgaaacga 30297752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30863351 - 30863391
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  30863351 ttaccaactatgctatctacattatgacttgtttgaaacga 30863391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33760513 - 33760473
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  33760513 ttaccaactatgctatctacaataggacttgtttgaaacga 33760473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1052631 - 1052669
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1052631 ttaccaactatgctatctacaataggacttgtttgaaac 1052669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 6501002 - 6500960
Alignment:
Q  301 ttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  6501002 ttgggtaagtgaggggagcctgggggaccgtccacatcgaggc 6500960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43166312 - 43166274
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  43166312 ttaccaactatgctatctacaataggacttgtttgaaac 43166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41282440 - 41282477
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41282440 ttaccaactatgctatctacaataggacttgtttgaaa 41282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3352045 - 3352005
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  3352045 ttaccaactatgttatctacaataggacttgtttgaaacga 3352005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6739998 - 6739958
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  6739998 ttaccaactatgttatctacaataggacttgtttgaaacga 6739958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8689670 - 8689710
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  8689670 ttaccaactatgttatctacattatgacttgtttgaaacga 8689710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11935543 - 11935583
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  11935543 ttaccaactatgttatctacaataggacttgtttgaaacga 11935583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19659544 - 19659504
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  19659544 ttaccaactatgctatctacaataggacttatttgaaacga 19659504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23128956 - 23128916
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  23128956 ttaccaattatgctatctacgatatgacttgtttgaaacga 23128916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28078448 - 28078408
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  28078448 ttaccaactatgctatctacattaggacttgtttgaaacga 28078408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31710380 - 31710420
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  31710380 ttaccaactatgttatctacattatgacttgtttgaaacga 31710420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40075048 - 40075086
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  40075048 ttaccaactatgttatctacaataggacttgtttgaaac 40075086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42993616 - 42993654
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  42993616 ttaccaactatgctatctacaataggaattgtttgaaac 42993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19398236 - 19398199
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  19398236 ttaccaactatgctatctacaatagaacttgtttgaaa 19398199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27116142 - 27116109
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgttt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  27116142 ttaccaactatgctatctacaataggacttgttt 27116109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 1028493 - 1028537
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    |||||||||| ||||||||||   |||||||||||||||||||||    
T  1028493 tgttgggtcactgaggggagctagggggaccgtccacatcgaggc 1028537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4015917 - 4015877
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| |||||| |||||||||    
T  4015917 ttaccaactatgttatctacaataggacttgcttgaaacga 4015877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6332874 - 6332914
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| ||||||||||||  |||||||||||||||    
T  6332874 ttaccaactattctatctacaatagaacttgtttgaaacga 6332914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14952422 - 14952462
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||| | ||||||||||||||||    
T  14952422 ttaccaactatgttatctacaacaagacttgtttgaaacga 14952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20079301 - 20079261
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||| || ||||||||||||||||    
T  20079301 ttaccaactatgttatctacattaggacttgtttgaaacga 20079261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 35342282 - 35342318
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||  ||||||||||||||||    
T  35342282 caactatgctatctacaatgagacttgtttgaaacga 35342318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39824654 - 39824694
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||  |||||||||| ||||||||||||||||    
T  39824654 ttaccaactatgtcatctacaataggacttgtttgaaacga 39824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5070 - 5030
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5070 ttaccaactatgctatctacaatatgacttgtttgaaacga 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 260075 - 260115
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  260075 ttaccaactatgctatctacaatatgacttgtttgaaacga 260115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 655846 - 655806
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  655846 ttaccaactatgctatctacaatatgacttgtttgaaacga 655806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 841581 - 841541
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  841581 ttaccaactatgctatctacaatatgacttgtttgaaacga 841541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 26058964 - 26059057
Alignment:
Q  40 gagctactatgggtacttcgttcatggttatgggaagattaccagacttgtgaatcagttgttaagagatggcgttgtatggaataaggaaatgca 135  Q
    ||||||| || ||| ||||| ||||||| |||  | |||||||||||| |||||||||||||||| || |||| |||||||||||||||| |||||    
T  26058964 gagctaccataggtgcttcgctcatggtaatg--atgattaccagactcgtgaatcagttgttaaaaggtggctttgtatggaataaggacatgca 26059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36400113 - 36400073
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36400113 ttaccaactatgctatctacaatatgacttgtttgaaacga 36400073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43806576 - 43806536
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43806576 ttaccaactatgctatctacaatatgacttgtttgaaacga 43806536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 513405 - 513445
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  513405 ttaccaactatgctatctacaataggacttgtttgaaacga 513445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2533370 - 2533410
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2533370 ttaccaactatgatatctacaatatgacttgtttgaaacga 2533410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15847210 - 15847250
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  15847210 ttaccaactatgctatctacaataggacttgtttgaaacga 15847250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23972338 - 23972298
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  23972338 ttaccaactatgttatctacaatatgacttgtttgaaacga 23972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38107197 - 38107237
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  38107197 ttaccaactatgctatctacaataagacttgtttgaaacga 38107237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38208851 - 38208891
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  38208851 ttaccaactatgttatctacaatatgacttgtttgaaacga 38208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40301936 - 40301896
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  40301936 ttaccaactatgctatctacaatatgacttttttgaaacga 40301896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41536570 - 41536530
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  41536570 ttaccaactatgctatctacaataggacttgtttgaaacga 41536530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22684031 - 22683994
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22684031 ttaccaactatgatatctacaatatgacttgtttgaaa 22683994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 440938 - 440978
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  440938 ttaccaactatgctatatacaataggacttgtttgaaacga 440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1293584 - 1293624
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  1293584 ttaccaactatgttatctacaacatgacttgtttgaaacga 1293624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3876006 - 3876046
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  3876006 ttaccaactatgttatctacaataggacttgtttgaaacga 3876046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24193173 - 24193133
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  24193173 ttaccaactatgttatctacaataggacttgtttgaaacga 24193133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28496398 - 28496358
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  28496398 ttaccaactatgttatctacaataggacttgtttgaaacga 28496358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35443409 - 35443449
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  35443409 ttaccaactatgctatctacaatagaacttgtttgaaacga 35443449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35884473 - 35884433
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  35884473 ttaccaactatgttatctacaataagacttgtttgaaacga 35884433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37933740 - 37933780
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  37933740 ttaccaactatgctatctacgataagacttgtttgaaacga 37933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 8137240 - 8137274
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  8137240 caactatgctatctacaataagacttgtttgaaac 8137274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9056381 - 9056343
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  9056381 ttaccaactatgttatctacaataggacttgtttgaaac 9056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4649248 - 4649288
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  4649248 ttaccaattatgctatctacaattggacttgtttgaaacga 4649288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13797186 - 13797226
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| || |||||||||||||    
T  13797186 ttaccaactatgctatatacaataggatttgtttgaaacga 13797226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 24430610 - 24430574
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  24430610 caactatactatctacaataggacttgtttgaaacga 24430574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33651939 - 33651979
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||| ||||||||||||||| ||| ||||||||||||||||    
T  33651939 ttacaaactatgctatctacgataggacttgtttgaaacga 33651979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38633753 - 38633713
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||| ||  |||||||||||||||    
T  38633753 ttaccaactatgctatctacattagaacttgtttgaaacga 38633713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 342
Target Start/End: Complemental strand, 41129159 - 41129127
Alignment:
Q  310 tgaggggagcctaggggaccgtccacatcgagg 342  Q
    |||||||||||| ||||||||||||||||||||    
T  41129159 tgaggggagcctgggggaccgtccacatcgagg 41129127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33884417 - 33884457
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33884417 ttaccaactatgctatctacaatatgacttgtttgaaacga 33884457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35600165 - 35600125
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35600165 ttaccaactatgctatctacaatatgacttgtttgaaacga 35600125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 221373 - 221413
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  221373 ttaccaactatgctatctacaataggacttgtttgaaacga 221413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1469536 - 1469496
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  1469536 ttaccaactatgctatctacaataggacttgtttgaaacga 1469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2960683 - 2960643
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  2960683 ttaccaactatgctatctacaataggacttgtttgaaacga 2960643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11476599 - 11476559
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  11476599 ttaccaactatgctatctacaataggacttgtttgaaacga 11476559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23842403 - 23842443
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23842403 ttaccaactatgctatctacaataggacttgtttgaaacga 23842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30971984 - 30971944
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  30971984 ttaccaactatgccatctacaatatgacttgtttgaaacga 30971944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42888947 - 42888987
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  42888947 ttaccaactatgctatctacaataggacttgtttgaaacga 42888987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44544507 - 44544547
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  44544507 ttaccaactatgctatctacaataggacttgtttgaaacga 44544547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47219243 - 47219283
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  47219243 ttaccaactatgctatctacaataggacttgtttgaaacga 47219283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 37394040 - 37394001
Alignment:
Q  2 taccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  37394040 taccaactatgctatctacaataggacttgtttgaaacga 37394001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8162755 - 8162717
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8162755 ttaccaactatgctatctacaataggacttgtttgaaac 8162717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29248440 - 29248477
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29248440 ttaccaactatgctatctacaataagacttgtttgaaa 29248477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41113475 - 41113512
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41113475 ttaccaactatgctatctacaataggacttgtttgaaa 41113512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11050304 - 11050264
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  11050304 ttaccaaatatgctatctacaataggacttgtttgaaacga 11050264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30798411 - 30798371
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  30798411 ttaccaactatgctatctacaataggatttgtttgaaacga 30798371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30876357 - 30876397
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  30876357 ttaccaactatgctatctacaatagcacttgtttgaaacga 30876397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31684177 - 31684137
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  31684177 ttaccaactattctatctacaataggacttgtttgaaacga 31684137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38427606 - 38427566
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  38427606 ttaccaactatgctatctataataggacttgtttgaaacga 38427566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43752819 - 43752779
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  43752819 ttaccaattatgctatctacaataggacttgtttgaaacga 43752779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43968302 - 43968262
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  43968302 ttaccaactacgctatctacaataggacttgtttgaaacga 43968262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47272079 - 47272119
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  47272079 ttaccaactatgttatctacaataggacttgtttgaaacga 47272119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47281167 - 47281127
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  47281167 ttaccaactatggtatctacaataggacttgtttgaaacga 47281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47294334 - 47294294
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  47294334 ttaccaacgatgctatctacaataggacttgtttgaaacga 47294294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48628903 - 48628943
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  48628903 ttaccaactatgttatctacaataggacttgtttgaaacga 48628943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4923314 - 4923352
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  4923314 ttaccaactatgctatccacaataggacttgtttgaaac 4923352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 30244534 - 30244490
Alignment:
Q  298 ttgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  30244534 ttgttgggtca-tgaggggagcctgagggaccgtccacatcgaggc 30244490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 30253752 - 30253708
Alignment:
Q  298 ttgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||    
T  30253752 ttgttgggtca-tgaggggagcctgggggacagtccacatcgaggc 30253708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 1085593 - 1085636
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    |||||||||| |||||||||||  |||||||||||||||||||||    
T  1085593 tgttgggtca-tgaggggagccagggggaccgtccacatcgaggc 1085636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 7518028 - 7517984
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    |||||||||| ||||||||||| ||||||||  ||||||||||||    
T  7518028 tgttgggtcactgaggggagccaaggggaccacccacatcgaggc 7517984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18353242 - 18353282
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||  || ||||||||||||||||    
T  18353242 ttaccaactatgctatctaccttaggacttgtttgaaacga 18353282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40851372 - 40851412
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  40851372 ttaccaactattctacctacaataggacttgtttgaaacga 40851412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42979381 - 42979341
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||| || ||||||||||||||||    
T  42979381 ttaccaactatgttatctacagtaggacttgtttgaaacga 42979341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 45723526 - 45723494
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||| |||||||||||||    
T  45723526 tatgctatctacaatatgatttgtttgaaacga 45723494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25730338 - 25730378
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25730338 ttaccaactatgctatctacaatatgacttgtttgaaacga 25730378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 55517228 - 55517188
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  55517228 ttaccaactatgctatctacaatatgacttgtttgaaacga 55517188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37381944 - 37381981
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37381944 ttaccaactatgctatctacaatatgacttgtttgaaa 37381981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5227488 - 5227528
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  5227488 ttaccaactatgctatctacaataggacttgtttgaaacga 5227528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10588678 - 10588718
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  10588678 ttaccaactatgctatctacaatacgacttgtttgaaacga 10588718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11795197 - 11795157
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  11795197 ttaccaactatgctatctagaatatgacttgtttgaaacga 11795157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26017521 - 26017561
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  26017521 ttaccaactatgctatctacaataggacttgtttgaaacga 26017561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28264741 - 28264781
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28264741 ttaccaactatgctatctacaataggacttgtttgaaacga 28264781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28812330 - 28812290
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28812330 ttaccaactatgctatctacaataggacttgtttgaaacga 28812290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31208842 - 31208882
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  31208842 ttaccaactatgctatctacaataggacttgtttgaaacga 31208882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31591173 - 31591213
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  31591173 ttaccaactatgctatctacaataggacttgtttgaaacga 31591213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33807823 - 33807783
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  33807823 ttaccaactatgctatctacaataggacttgtttgaaacga 33807783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42273900 - 42273940
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  42273900 ttaccaactatgctatctacaataggacttgtttgaaacga 42273940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48551807 - 48551767
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  48551807 ttaccaaccatgctatctacaatatgacttgtttgaaacga 48551767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49118709 - 49118749
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  49118709 ttaccaactatgctatctacaataggacttgtttgaaacga 49118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50276181 - 50276141
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  50276181 ttaccaactatgctatctacaataggacttgtttgaaacga 50276141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9339166 - 9339129
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9339166 ttaccaactatgttatctacaatatgacttgtttgaaa 9339129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12196567 - 12196604
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12196567 ttaccaactatgctatctacaataggacttgtttgaaa 12196604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48707776 - 48707739
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48707776 ttaccaactatgctatctacaataggacttgtttgaaa 48707739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 2055380 - 2055416
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||| ||||||||||||||||||||||||||||    
T  2055380 caactatgttatctacaatatgacttgtttgaaacga 2055416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4545028 - 4544988
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  4545028 ttaccaactatgttatctacaataggacttgtttgaaacga 4544988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14564894 - 14564934
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  14564894 ttaccaactatgctatatacaataggacttgtttgaaacga 14564934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15985108 - 15985148
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  15985108 ttaccaactatgttatctagaatatgacttgtttgaaacga 15985148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17847139 - 17847099
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  17847139 ttaccaattatgctatctacaataggacttgtttgaaacga 17847099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17993060 - 17993020
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  17993060 ttaccaactatgctatttacaataggacttgtttgaaacga 17993020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20534263 - 20534303
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  20534263 ttaccaactatgctatcaacaataggacttgtttgaaacga 20534303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23135049 - 23135009
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  23135049 ttaccaactatgttatctacaataggacttgtttgaaacga 23135009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24458674 - 24458634
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  24458674 ttaccaactatgttatctacaataagacttgtttgaaacga 24458634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30141151 - 30141111
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  30141151 ttaccaactatgctatcaacaataggacttgtttgaaacga 30141111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30467046 - 30467006
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  30467046 ttaccaactatgctatctacaatagaacttgtttgaaacga 30467006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31973689 - 31973729
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  31973689 ttaccaactatgctatctacaatagaacttgtttgaaacga 31973729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32118812 - 32118852
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  32118812 ttaccaactatgctatctacaatagaacttgtttgaaacga 32118852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33693376 - 33693336
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  33693376 ttaccaactatgctatctacaacaggacttgtttgaaacga 33693336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35930137 - 35930177
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  35930137 ttaccaactatgctatctacaatagaacttgtttgaaacga 35930177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 40988735 - 40988771
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  40988735 caactatgctatctacaataggacttgtttgaaacga 40988771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44490417 - 44490457
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  44490417 ttaccaactatgatatctacaataggacttgtttgaaacga 44490457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51371090 - 51371050
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  51371090 ttaccaactatgctatctacaatagaacttgtttgaaacga 51371050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19496145 - 19496107
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  19496145 ttaccaactatggtatctacaataggacttgtttgaaac 19496107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25734266 - 25734229
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  25734266 ttaccaactatgttatctacaataggacttgtttgaaa 25734229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28159996 - 28159959
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  28159996 ttaccaactatggtatctacaataagacttgtttgaaa 28159959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32318051 - 32318088
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  32318051 ttaccaactatgttatctacaataggacttgtttgaaa 32318088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 8882052 - 8882016
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  8882052 caactatgctatctagaataggacttgtttgaaacga 8882016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 10246101 - 10246057
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    ||||||||||| ||||||||| | ||||| |||||||||||||||    
T  10246101 tgttgggtcagcgaggggagcttgggggagcgtccacatcgaggc 10246057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22298616 - 22298656
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||| | ||||||||||||||    
T  22298616 ttaccaattatgctatctacaatagggcttgtttgaaacga 22298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 23553170 - 23553202
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||| ||||||||||||||||||    
T  23553170 tatgctatctacaacatgacttgtttgaaacga 23553202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33174063 - 33174023
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||  |||||||||| ||||||||||||||||    
T  33174063 ttaccaactatgaaatctacaataagacttgtttgaaacga 33174023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39995210 - 39995170
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||||||  |||||||||||||||    
T  39995210 ttaccaactatgttatctacaatagaacttgtttgaaacga 39995170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48149597 - 48149637
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||| || ||||||||||||||||    
T  48149597 ttaccaactatgttatctacattaggacttgtttgaaacga 48149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50542397 - 50542357
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| || |||||| ||||||    
T  50542397 ttaccaactatgctatctacaataagatttgtttaaaacga 50542357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20760114 - 20760074
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20760114 ttaccaactatgctatctacaatatgacttgtttgaaacga 20760074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35346514 - 35346474
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35346514 ttaccaactatgctatctacaatatgacttgtttgaaacga 35346474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38446574 - 38446614
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38446574 ttaccaactatgctatctacaatatgacttgtttgaaacga 38446614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1017142 - 1017182
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  1017142 ttaccaactatgctatctacaataggacttgtttgaaacga 1017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1687749 - 1687789
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  1687749 ttaccaactatgctatctacaataggacttgtttgaaacga 1687789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21564594 - 21564634
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  21564594 ttaccaactatgctatctacaataggacttgtttgaaacga 21564634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26455680 - 26455720
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  26455680 ttaccaactatgctatctacaacatgacttgtttgaaacga 26455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27070782 - 27070742
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27070782 ttaccaactatgctatctacaataagacttgtttgaaacga 27070742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31122760 - 31122800
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  31122760 ttaccaactatgctatctacaataagacttgtttgaaacga 31122800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40922208 - 40922168
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  40922208 ttaccaactatgctatctacaatacgacttgtttgaaacga 40922168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42016971 - 42017011
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  42016971 ttaccaactatgttatctacaatatgacttgtttgaaacga 42017011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44798365 - 44798405
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  44798365 ttaccaactatgctatctacaataggacttgtttgaaacga 44798405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50287664 - 50287704
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  50287664 ttaccaactatgctatctacaataggacttgtttgaaacga 50287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 5371786 - 5371840
Alignment:
Q  91 gaatcagttgttaagagatggcgttgtatggaataaggaaatgcaggcagcattt 145  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||| || |||||    
T  5371786 gaatcagttgttaaaagatggctttggatggaataaggaaatgcagccaccattt 5371840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19664639 - 19664677
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19664639 ttaccaactatgctatctacaataggacttgtttgaaac 19664677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36315015 - 36314977
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36315015 ttaccaactatgctatctacaataggacttgtttgaaac 36314977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41250984 - 41251022
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41250984 ttaccaactatgctatctacaataagacttgtttgaaac 41251022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20813484 - 20813444
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  20813484 ttaccaattatgctatctacattatgacttgtttgaaacga 20813444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21656616 - 21656656
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  21656616 ttaccaactatgctatatacaataggacttgtttgaaacga 21656656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33151794 - 33151834
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  33151794 ttaccaactatgttatctacaataggacttgtttgaaacga 33151834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37248054 - 37248094
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  37248054 ttaccaactatgttatctacaataggacttgtttgaaacga 37248094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42107142 - 42107102
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  42107142 ttaccaactatactatctacaataggacttgtttgaaacga 42107102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47329218 - 47329178
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  47329218 ttaccaactatgctatctacgatatgacttgttggaaacga 47329178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48651346 - 48651386
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  48651346 ttaccaactatgctatctacattaggacttgtttgaaacga 48651386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12748489 - 12748524
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttga 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  12748489 ttaccaactatgctatctacaataggacttgtttga 12748524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 44152772 - 44152811
Alignment:
Q  2 taccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  44152772 taccaactatgttatctataatatgacttgtttgaaacga 44152811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 55164154 - 55164120
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||||| ||||||||    
T  55164154 caactatgctatctacaatatgacttatttgaaac 55164120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3697244 - 3697281
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  3697244 ttaccaactatactatctacaataggacttgtttgaaa 3697281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 22304376 - 22304331
Alignment:
Q  299 tgttgggtcagtgaggggagcctagggg-accgtccacatcgaggc 343  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||    
T  22304376 tgttgggtcagtgaggggaagctagggggaccgtccacatcgaggc 22304331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22852094 - 22852131
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  22852094 ttaccaactatgctatctacaataggacttatttgaaa 22852131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 53926022 - 53925985
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  53926022 ttaccaactatactatctacaatatgacttatttgaaa 53925985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20086357 - 20086317
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  20086357 ttaccaagtatgctatctataataggacttgtttgaaacga 20086317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 20913793 - 20913757
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||  |||||||||||||||    
T  20913793 caactatgctatctacaatagaacttgtttgaaacga 20913757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 20921911 - 20921875
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||  |||||||||||||||    
T  20921911 caactatgctatctacaatagaacttgtttgaaacga 20921875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33473282 - 33473242
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||||||  |||||||||||||||    
T  33473282 ttaccaactatgttatctacaataaaacttgtttgaaacga 33473242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35608174 - 35608134
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||| ||||| ||||||||||    
T  35608174 ttaccaattatgctatctacaataggacttatttgaaacga 35608134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 39069828 - 39069864
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||  |||||||||||||||||||||||    
T  39069828 caactatgctattaacaatatgacttgtttgaaacga 39069864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 41359467 - 41359511
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    ||||||||||| |||||||| || ||||||||||||||| |||||    
T  41359467 tgttgggtcagcgaggggagtctgggggaccgtccacattgaggc 41359511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53196112 - 53196152
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||| ||||||||||    
T  53196112 ttaccaactatgttatctacaataagacttctttgaaacga 53196152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7297277 - 7297237
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7297277 ttaccaactatgctatctacaatatgacttgtttgaaacga 7297237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2094453 - 2094413
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  2094453 ttaccaactatgctatctacaataggacttgtttgaaacga 2094413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9276672 - 9276712
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  9276672 ttaccaactatgctatctacaataggacttgtttgaaacga 9276712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11949469 - 11949429
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  11949469 ttaccaactatgctatctacaataggacttgtttgaaacga 11949429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14630712 - 14630752
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14630712 ttaccaactatgttatctacaatatgacttgtttgaaacga 14630752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16246236 - 16246196
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  16246236 ttaccaactatgctatctacaataggacttgtttgaaacga 16246196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17134327 - 17134367
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  17134327 ttaccaactatgctatctacaataggacttgtttgaaacga 17134367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17484593 - 17484553
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  17484593 ttaccaactatgctatctacaataggacttgtttgaaacga 17484553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27328682 - 27328722
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27328682 ttaccaactatgctatctacaataggacttgtttgaaacga 27328722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28650469 - 28650429
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28650469 ttaccaactatgctatctacaataggacttgtttgaaacga 28650429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34253240 - 34253280
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  34253240 ttaccaactatgctatctacaataggacttgtttgaaacga 34253280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37838395 - 37838435
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  37838395 ttaccaactatgctatctacaataggacttgtttgaaacga 37838435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40854707 - 40854747
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  40854707 ttaccaactatgctatctacaataggacttgtttgaaacga 40854747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2315018 - 2314980
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  2315018 ttaccaactatgctatctacaataagacttgtttgaaac 2314980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2456108 - 2456146
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  2456108 ttaccaactatgctatctacaataggacttgtttgaaac 2456146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 772018 - 771981
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  772018 ttaccaactatgctatctacaataggacttgtttgaaa 771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 921124 - 921160
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  921124 caactatgctatctacaataggacttgtttgaaacga 921160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2057024 - 2057064
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  2057024 ttaccaactatgttatctacaataagacttgtttgaaacga 2057064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3430667 - 3430631
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3430667 ttaccaactatgctatctacaataggacttgtttgaa 3430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7379061 - 7379101
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  7379061 ttaccaactattctatctacattatgacttgtttgaaacga 7379101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8899780 - 8899812
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtt 33  Q
    |||||||||||||||||||||||||||||||||    
T  8899780 ttaccaactatgctatctacaatatgacttgtt 8899812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12759793 - 12759753
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  12759793 ttaccaactatgttatctacaataggacttgtttgaaacga 12759753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33865310 - 33865270
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  33865310 ttaccaactatgttatctacaataagacttgtttgaaacga 33865270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36444271 - 36444231
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  36444271 ttaccaactatgctatctactataggacttgtttgaaacga 36444231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41500545 - 41500505
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  41500545 ttaccaactatgctatgtacaataggacttgtttgaaacga 41500505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45124217 - 45124257
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  45124217 ttaccaactatgctatctacaataagatttgtttgaaacga 45124257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 28217003 - 28216969
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||| ||||||||||||||||||||||||||    
T  28217003 caactatgttatctacaatatgacttgtttgaaac 28216969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9331854 - 9331894
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||| || |||||||||||| ||||||||||||||||    
T  9331854 ttaccaacaatactatctacaataggacttgtttgaaacga 9331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19180519 - 19180559
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||| |||||| |||||||||||| ||||||||||||||||    
T  19180519 ttactaactatactatctacaataagacttgtttgaaacga 19180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33107012 - 33106972
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| |||| |||||||||||    
T  33107012 ttaccaactatgatatctacaataggactcgtttgaaacga 33106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37732236 - 37732196
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||| ||||||| ||||||||||||||||    
T  37732236 ttaccaactatgttatttacaataagacttgtttgaaacga 37732196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38751146 - 38751186
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| ||||||||| || ||||||||||||||||    
T  38751146 ttaccaactatactatctacattaggacttgtttgaaacga 38751186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 41283451 - 41283495
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    |||||||| |||||||||||| | |||||||||||||||| ||||    
T  41283451 tgttgggtaagtgaggggagcatgggggaccgtccacatcaaggc 41283495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19315738 - 19315778
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19315738 ttaccaactatgctatctacaatatgacttgtttgaaacga 19315778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23767457 - 23767417
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23767457 ttaccaactatgctatctacaatatgacttgtttgaaacga 23767417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7553059 - 7553019
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7553059 ttaccaactatgttatctacaatatgacttgtttgaaacga 7553019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 7651764 - 7651800
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||||||    
T  7651764 caactatgctatctacaatatgacttgtttgaaacga 7651800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18892427 - 18892467
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  18892427 ttaccaactatgctatctacaataggacttgtttgaaacga 18892467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24204514 - 24204474
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  24204514 ttaccaactatgctatctacaataggacttgtttgaaacga 24204474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25988314 - 25988274
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  25988314 ttaccaactatgctatctacaataggacttgtttgaaacga 25988274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26069990 - 26070030
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26069990 ttaccaactatgatatctacaatatgacttgtttgaaacga 26070030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37216994 - 37217034
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  37216994 ttaccaactatgctatctacaataggacttgtttgaaacga 37217034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41106114 - 41106154
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  41106114 ttaccaactatgctatctacaataggacttgtttgaaacga 41106154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46095118 - 46095078
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  46095118 ttaccaactatgctatctacaataggacttgtttgaaacga 46095078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48802374 - 48802334
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  48802374 ttaccaactatgctatctacaataagacttgtttgaaacga 48802334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49094754 - 49094714
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  49094754 ttaccaactatgctatctacaataggacttgtttgaaacga 49094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50690041 - 50690081
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  50690041 ttaccaactatgttatctacaatatgacttgtttgaaacga 50690081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 48669437 - 48669399
Alignment:
Q  3 accaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  48669437 accaactatgctatctacaataggacttgtttgaaacga 48669399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5400968 - 5401005
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  5400968 ttaccaactatgctatctacaataggacttgtttgaaa 5401005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9878827 - 9878787
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  9878827 ttaccaactattttatctacaatatgacttgtttgaaacga 9878787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12143170 - 12143210
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  12143170 ttaccaactatgttatctacaataggacttgtttgaaacga 12143210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21929624 - 21929664
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  21929624 ttaccaactatgctatctacaatagaacttgtttgaaacga 21929664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23228237 - 23228197
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  23228237 ttaccaactatgctatctacaatagtacttgtttgaaacga 23228197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26549486 - 26549526
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  26549486 ttaccaactatgctatctacaataggacttgtttaaaacga 26549526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28425406 - 28425366
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  28425406 ttaccaactatgctatctgcaataggacttgtttgaaacga 28425366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33325825 - 33325865
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  33325825 ttaccaactatgttatctacaataggacttgtttgaaacga 33325865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36781215 - 36781175
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  36781215 ttaccaactatgatatctacaataagacttgtttgaaacga 36781175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38473669 - 38473629
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  38473669 ttaccaactatgatatctacaataggacttgtttgaaacga 38473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 41982274 - 41982238
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||| ||||||||||||||||||||||||||||    
T  41982274 caactatgttatctacaatatgacttgtttgaaacga 41982238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46051548 - 46051588
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  46051548 ttaccaactatgctatctacaacaggacttgtttgaaacga 46051588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46825629 - 46825669
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  46825629 ttaccaattatgctatctacaataggacttgtttgaaacga 46825669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49814398 - 49814438
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  49814398 ttaccaactatgctatctagaatatgacttatttgaaacga 49814438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52349967 - 52349927
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  52349967 ttaccaactatgctatttacaataggacttgtttgaaacga 52349927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 45084617 - 45084576
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgag 341  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  45084617 tgttgggtca-tgagggaagcctaggggaccgtccacatcgag 45084576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 18782128 - 18782095
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaa 38  Q
    ||||||||||||||| ||||||||||||||||||    
T  18782128 caactatgctatctagaatatgacttgtttgaaa 18782095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 36157718 - 36157681
Alignment:
Q  4 ccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  36157718 ccaattatgctatctacaataggacttgtttgaaacga 36157681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6711538 - 6711578
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||  | ||||||||||||||||||||||||||    
T  6711538 ttaccaactataatgtctacaatatgacttgtttgaaacga 6711578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 7608805 - 7608769
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  7608805 caactatgctatctataataggacttgtttgaaacga 7608769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 8141521 - 8141489
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||||||||||||    
T  8141521 tatgctatctacaataggacttgtttgaaacga 8141489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9962849 - 9962889
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  9962849 ttaccaactatgctatctacaacagaacttgtttgaaacga 9962889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16705968 - 16706008
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||| |||| ||||||||||||||||    
T  16705968 ttaccaactatgttatctaaaataagacttgtttgaaacga 16706008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 18917630 - 18917662
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||||||||||| |||||||||||||    
T  18917630 tatgctatctacaatatgatttgtttgaaacga 18917662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19274657 - 19274697
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||| ||||| ||||||||||| ||||||||||||||||    
T  19274657 ttaccagctatgttatctacaataggacttgtttgaaacga 19274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33674115 - 33674155
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||| ||||||||||||||||| ||||||||||| ||||    
T  33674115 ttaccagctatgctatctacaataggacttgtttgacacga 33674155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34971178 - 34971218
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||||| || ||||||||||||||||    
T  34971178 ttaccaactatgttatctacattaggacttgtttgaaacga 34971218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 40721445 - 40721481
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| |||||||| |||||||    
T  40721445 caactatgctatctacaataggacttgttggaaacga 40721481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 44290800 - 44290844
Alignment:
Q  299 tgttgggtcagtgaggggagcctaggggaccgtccacatcgaggc 343  Q
    ||||||||||||| |||||||   |||||||||||||||||||||    
T  44290800 tgttgggtcagtggggggagctcgggggaccgtccacatcgaggc 44290844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50533481 - 50533521
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| |||||| |||| ||||||||||||||||    
T  50533481 ttaccaactatgttatctataataggacttgtttgaaacga 50533521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52147091 - 52147131
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||| ||||||||||| ||||| ||||||||||||||||||    
T  52147091 ttacaaactatgctatatacaacatgacttgtttgaaacga 52147131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 218984 - 219024
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  218984 ttaccaactatgctatctacaataggacttgtttgaaacga 219024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2598142 - 2598102
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2598142 ttaccaactatgatatctacaatatgacttgtttgaaacga 2598102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3408287 - 3408327
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  3408287 ttaccaactatactatctacaatatgacttgtttgaaacga 3408327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10256335 - 10256375
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  10256335 ttaccaactatgctatctacaataggacttgtttgaaacga 10256375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12613014 - 12612974
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  12613014 ttaccaactatgctatctacaataggacttgtttgaaacga 12612974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29050370 - 29050410
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  29050370 ttaccaactatgctatctacaataggacttgtttgaaacga 29050410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30379115 - 30379155
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  30379115 ttaccaactatgctatctacaataggacttgtttgaaacga 30379155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1915386 - 1915348
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaac 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1915386 ttaccaactatgctatctacaataggacttgtttgaaac 1915348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1077335 - 1077375
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  1077335 ttaccaactatgctatctacaacatgacttatttgaaacga 1077375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2390363 - 2390403
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  2390363 ttaccaactatgttatctacaataggacttgtttgaaacga 2390403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2707557 - 2707597
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  2707557 ttaccaactatgatatctacaataggacttgtttgaaacga 2707597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6503816 - 6503856
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  6503816 ttaccaactatgatatctacaataggacttgtttgaaacga 6503856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8178292 - 8178252
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  8178292 ttaccaactatgctatctacaataggacatgtttgaaacga 8178252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12626734 - 12626774
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  12626734 ttaccaactattctatctacaataggacttgtttgaaacga 12626774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17428315 - 17428275
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  17428315 ttaccaactatgttatctacaataggacttgtttgaaacga 17428275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 31376019 - 31376055
Alignment:
Q  5 caactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31376019 caactatgctatctacaataggacttgtttgaaacga 31376055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 342
Target Start/End: Original strand, 2578822 - 2578854
Alignment:
Q  310 tgaggggagcctaggggaccgtccacatcgagg 342  Q
    |||||||||||| ||||||||||||||||||||    
T  2578822 tgaggggagcctgggggaccgtccacatcgagg 2578854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11133972 - 11134012
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  11133972 ttaccatctatgctatctacgataggacttgtttgaaacga 11134012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17943134 - 17943174
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||||| ||||||||||||| || ||||||||||||||||    
T  17943134 ttaccaattatgctatctacattaggacttgtttgaaacga 17943174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25820592 - 25820552
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  25820592 ttaccaactatgctatctacgataggaattgtttgaaacga 25820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 13201 - 13233
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||    
T  13201 tatgctatctacaatatgacttgtttgaaacga 13233  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 59643 - 59611
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||||||||||||||||||||    
T  59643 tatgctatctacaatatgacttgtttgaaacga 59611  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 252481 - 252441
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  252481 ttaccaactatgctatatacaataggacttgtttgaaacga 252441  T

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Target: scaffold1986 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 212 - 252
Alignment:
Q  1 ttaccaactatgctatctacaatatgacttgtttgaaacga 41  Q
    ||||| ||||||||||||||| || ||||||||||||||||    
T  212 ttaccgactatgctatctacattaggacttgtttgaaacga 252  T

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Target: scaffold0727 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 5291 - 5323
Alignment:
Q  9 tatgctatctacaatatgacttgtttgaaacga 41  Q
    |||||||||||||| ||||||||||||||||||    
T  5291 tatgctatctacaacatgacttgtttgaaacga 5323  T

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