View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17795_low_72 (Length: 202)
Name: NF17795_low_72
Description: NF17795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17795_low_72 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22573616 - 22573798
Alignment:
| Q |
1 |
ccaaacgattccgtaagcaccgcgaccaataggcatgatcggaggacgatacttagccgtaacctcgaaaagattaccgaacacgttgtactgaacgaac |
100 |
Q |
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| T |
22573616 |
ccaaacgattccgtaagcaccacgaccaataggcatgatcggaggacgatacttagccgtaacctcgaaaagattaccgaacacgttgtactgaacgaac |
22573715 |
T |
|
| Q |
101 |
tgtccgccgtgagtctgaaccgccggaaactcagcgacgccgttttggttaactccggccattgatttgatttgatttgattt |
183 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22573716 |
tgtccgccgtgagtctgaaccgccggaaactcagcgacgccgttttggttaactccggccattgatttgatttgatttgattt |
22573798 |
T |
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