View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17796_high_44 (Length: 201)
Name: NF17796_high_44
Description: NF17796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17796_high_44 |
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| [»] scaffold0020 (1 HSPs) |
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Alignment Details
Target: scaffold0020 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 130825 - 130758
Alignment:
| Q |
13 |
aatataataaagcaagattagttctttgacaaatttgtcatttgtcaagcaaacaagggtggtttctt |
80 |
Q |
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| T |
130825 |
aatataataaagcaagattagttctttgacaagtttgtcatttgtcaagcaaacaagggtggtttctt |
130758 |
T |
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