View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17796_low_22 (Length: 354)

Name: NF17796_low_22
Description: NF17796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17796_low_22
NF17796_low_22
[»] chr5 (22 HSPs)
chr5 (18-309)||(4293818-4294109)
chr5 (32-147)||(338765-338880)
chr5 (47-131)||(1479152-1479236)
chr5 (38-152)||(38610299-38610413)
chr5 (34-131)||(39335482-39335579)
chr5 (92-147)||(12914168-12914223)
chr5 (92-147)||(39167589-39167644)
chr5 (18-132)||(10406796-10406909)
chr5 (32-137)||(1759820-1759925)
chr5 (28-125)||(4421961-4422058)
chr5 (47-132)||(25568308-25568393)
chr5 (91-143)||(10163686-10163738)
chr5 (92-147)||(39567896-39567951)
chr5 (90-132)||(10979834-10979876)
chr5 (33-131)||(25017293-25017391)
chr5 (19-136)||(678454-678571)
chr5 (79-132)||(8454568-8454621)
chr5 (18-119)||(17168697-17168798)
chr5 (90-131)||(17605970-17606011)
chr5 (29-137)||(3241951-3242059)
chr5 (92-143)||(15310995-15311047)
chr5 (92-132)||(43414125-43414165)
[»] chr3 (23 HSPs)
chr3 (18-134)||(18774-18890)
chr3 (18-147)||(45899530-45899660)
chr3 (49-134)||(18946-19031)
chr3 (34-152)||(34060768-34060887)
chr3 (34-147)||(13647039-13647155)
chr3 (18-108)||(46365268-46365358)
chr3 (41-132)||(11675321-11675410)
chr3 (28-147)||(36730150-36730269)
chr3 (34-132)||(4759853-4759951)
chr3 (90-132)||(11316974-11317016)
chr3 (46-140)||(39436465-39436559)
chr3 (46-119)||(49976156-49976229)
chr3 (18-147)||(51256061-51256189)
chr3 (18-145)||(8498022-8498150)
chr3 (33-132)||(32415577-32415676)
chr3 (92-139)||(37509112-37509159)
chr3 (49-147)||(12051031-12051129)
chr3 (85-131)||(34750311-34750357)
chr3 (35-120)||(26850498-26850583)
chr3 (18-71)||(27863989-27864042)
chr3 (36-132)||(4542358-4542454)
chr3 (47-147)||(8847468-8847568)
chr3 (35-143)||(33633846-33633954)
[»] chr4 (36 HSPs)
chr4 (18-147)||(35675177-35675306)
chr4 (18-147)||(31010414-31010543)
chr4 (34-136)||(13498120-13498222)
chr4 (18-132)||(30617957-30618071)
chr4 (36-136)||(30199791-30199891)
chr4 (36-152)||(51018384-51018500)
chr4 (18-147)||(27545855-27545984)
chr4 (18-147)||(31494648-31494777)
chr4 (60-147)||(966575-966662)
chr4 (32-147)||(26040361-26040476)
chr4 (18-147)||(23260697-23260827)
chr4 (18-147)||(40593595-40593723)
chr4 (91-143)||(23690979-23691031)
chr4 (47-147)||(31754931-31755031)
chr4 (60-147)||(15986259-15986346)
chr4 (29-136)||(29462805-29462912)
chr4 (36-143)||(52341598-52341705)
chr4 (92-147)||(54339106-54339161)
chr4 (36-122)||(20435795-20435881)
chr4 (93-147)||(39158388-39158442)
chr4 (36-147)||(3684541-3684648)
chr4 (91-140)||(36486746-36486795)
chr4 (18-143)||(55120088-55120213)
chr4 (29-141)||(48513618-48513730)
chr4 (33-132)||(1457537-1457636)
chr4 (92-147)||(19328989-19329044)
chr4 (92-147)||(23765571-23765626)
chr4 (48-147)||(30475418-30475517)
chr4 (92-147)||(34316784-34316839)
chr4 (105-143)||(20435896-20435934)
chr4 (18-108)||(22376286-22376376)
chr4 (46-147)||(20456562-20456663)
chr4 (48-125)||(51266939-51267016)
chr4 (60-152)||(21760558-21760650)
chr4 (47-131)||(33951709-33951793)
chr4 (47-147)||(45688736-45688836)
[»] chr2 (18 HSPs)
chr2 (18-147)||(11659255-11659384)
chr2 (18-147)||(2239575-2239704)
chr2 (35-147)||(2805374-2805488)
chr2 (47-143)||(10900266-10900362)
chr2 (91-143)||(12695298-12695350)
chr2 (35-122)||(8326998-8327085)
chr2 (48-125)||(17603826-17603903)
chr2 (24-125)||(39085785-39085886)
chr2 (91-147)||(16242010-16242066)
chr2 (35-119)||(30831639-30831723)
chr2 (47-147)||(41436471-41436571)
chr2 (28-147)||(862582-862701)
chr2 (18-77)||(1729547-1729606)
chr2 (92-147)||(27495116-27495171)
chr2 (18-125)||(34220633-34220740)
chr2 (93-147)||(40798385-40798439)
chr2 (46-131)||(2136445-2136530)
chr2 (36-132)||(17457378-17457474)
[»] chr1 (27 HSPs)
chr1 (18-147)||(17402941-17403070)
chr1 (18-147)||(43168134-43168263)
chr1 (18-143)||(14331834-14331959)
chr1 (18-143)||(44359656-44359781)
chr1 (36-147)||(26469584-26469695)
chr1 (30-147)||(40920178-40920297)
chr1 (33-125)||(52396458-52396549)
chr1 (21-126)||(16691308-16691413)
chr1 (18-126)||(41898844-41898951)
chr1 (47-130)||(40845261-40845344)
chr1 (32-147)||(41147476-41147591)
chr1 (24-147)||(43433768-43433891)
chr1 (18-147)||(48938629-48938757)
chr1 (68-119)||(31975508-31975559)
chr1 (52-147)||(51424150-51424245)
chr1 (36-125)||(28277484-28277573)
chr1 (32-125)||(50295431-50295524)
chr1 (32-108)||(7190473-7190549)
chr1 (91-147)||(8892828-8892884)
chr1 (63-147)||(25177478-25177562)
chr1 (18-77)||(21268279-21268338)
chr1 (18-128)||(41492921-41493030)
chr1 (27-116)||(2125700-2125789)
chr1 (45-118)||(10160977-10161050)
chr1 (47-147)||(11385974-11386074)
chr1 (47-147)||(33929959-33930059)
chr1 (92-132)||(44286880-44286920)
[»] chr8 (16 HSPs)
chr8 (33-146)||(11332796-11332909)
chr8 (90-147)||(37922988-37923045)
chr8 (32-147)||(38869997-38870112)
chr8 (18-108)||(7532817-7532907)
chr8 (18-143)||(11295451-11295576)
chr8 (35-147)||(24304935-24305046)
chr8 (92-147)||(45337997-45338052)
chr8 (41-143)||(26892783-26892885)
chr8 (18-143)||(39972139-39972264)
chr8 (32-147)||(19389311-19389426)
chr8 (41-127)||(6841706-6841791)
chr8 (94-147)||(30351584-30351637)
chr8 (90-131)||(35455277-35455318)
chr8 (18-83)||(36766633-36766698)
chr8 (32-125)||(40550378-40550471)
chr8 (92-132)||(25249402-25249442)
[»] chr6 (14 HSPs)
chr6 (34-143)||(27127510-27127619)
chr6 (32-143)||(12226332-12226443)
chr6 (18-132)||(28014643-28014757)
chr6 (38-147)||(6507396-6507505)
chr6 (91-147)||(34780038-34780094)
chr6 (32-147)||(31220328-31220443)
chr6 (47-147)||(5578267-5578367)
chr6 (47-147)||(10855426-10855525)
chr6 (80-132)||(21186066-21186118)
chr6 (32-116)||(29692342-29692426)
chr6 (92-140)||(29964301-29964349)
chr6 (51-132)||(7875201-7875282)
chr6 (46-147)||(12175553-12175653)
chr6 (35-119)||(12775131-12775215)
[»] chr7 (30 HSPs)
chr7 (18-132)||(1907576-1907690)
chr7 (33-147)||(5240334-5240448)
chr7 (48-129)||(18800166-18800246)
chr7 (28-143)||(3863039-3863154)
chr7 (52-143)||(32204179-32204270)
chr7 (18-125)||(41084813-41084920)
chr7 (92-147)||(10575820-10575875)
chr7 (92-143)||(16931888-16931939)
chr7 (92-143)||(16937271-16937322)
chr7 (28-147)||(27053490-27053609)
chr7 (92-147)||(30388721-30388776)
chr7 (24-131)||(42222230-42222337)
chr7 (32-131)||(49069564-49069663)
chr7 (18-136)||(35003609-35003726)
chr7 (94-147)||(16957658-16957711)
chr7 (91-152)||(34835852-34835913)
chr7 (28-77)||(44478446-44478495)
chr7 (47-147)||(8380434-8380534)
chr7 (18-102)||(31360279-31360363)
chr7 (18-141)||(41769635-41769759)
chr7 (32-147)||(40763242-40763357)
chr7 (26-116)||(36279143-36279233)
chr7 (90-147)||(6548523-6548580)
chr7 (18-71)||(9887216-9887269)
chr7 (90-131)||(14718177-14718218)
chr7 (90-147)||(35404313-35404370)
chr7 (92-132)||(31626102-31626142)
chr7 (32-132)||(35239788-35239888)
chr7 (35-119)||(40774246-40774330)
chr7 (91-147)||(48879663-48879719)
[»] scaffold0050 (1 HSPs)
scaffold0050 (18-132)||(37376-37480)
[»] scaffold0062 (3 HSPs)
scaffold0062 (30-147)||(16771-16887)
scaffold0062 (30-147)||(26939-27055)
scaffold0062 (30-147)||(37105-37221)
[»] scaffold0144 (1 HSPs)
scaffold0144 (48-147)||(39582-39679)


Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 309
Target Start/End: Original strand, 4293818 - 4294109
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |    
T  4293818 aaagagtgttcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaatgataaagagtagtgaatttaactttttaaaagtcaaaaga 4293917  T
Q  118 ttattgaatccaatgtaaatatactactttcaattcc---aaaggcatttgttaatataacccttagnnnnnnnncaaaacacacacaaatcgtacgtgc 214  Q
    |||||||||||||| |||||||||||||||||||| |   ||| |||||||||| ||||||||| |         |||||||||||||||||||||||||    
T  4293918 ttattgaatccaatataaatatactactttcaatttctttaaaagcatttgttagtataaccctca---aaaaaacaaaacacacacaaatcgtacgtgc 4294014  T
Q  215 ttttaactcctcatgtcccataagtaccatgaagctataaactaaagcttccactctcaccctcctcaactaactagtaattccgtacccaaaaa 309  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  4294015 tcttaactcctcatgtcccataagtaccatgaagctataaactaaagcttccactctcaccctccccaactaaatagtaattccgtacccaaaaa 4294109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 338765 - 338880
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| |||| |||||||||||  |||||  |||||| |||| ||||| |||| | |||||||||||||||||||||||||||| ||||| | |||    
T  338765 gggcattggataaagggataaaaataaaaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttgaaacaaat 338864  T
Q  132 gtaaatatactacttt 147  Q
    | ||| || |||||||    
T  338865 gcaaacatgctacttt 338880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 1479152 - 1479236
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    |||||||||||| ||||| | ||||| ||||||| || |||| | ||||||||||||||||| ||||||| |||||||| |||||    
T  1479152 ggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaaccaat 1479236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 38610299 - 38610413
Alignment:
Q  38 tggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaat 137  Q
    ||||||| | ||||||||||| || |||| ||||| |||| ||||| ||||  |||||||||||||||||| |||||| ||| ||||||  ||| |||||    
T  38610299 tggttaagatgataaaaatagaaacattgcattgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaatttaatctaaat 38610398  T
Q  138 atactactttcaatt 152  Q
    | |||| ||| ||||    
T  38610399 aaactatttttaatt 38610413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 39335579 - 39335482
Alignment:
Q  34 gcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    |||||| |||| |||||| |||||  ||| |||| || | ||||| |||| |||| ||||||||||||||||||| ||||||| || |||||||||||    
T  39335579 gcattgattaagaggatacaaatataaattttgtgttcaaaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaat 39335482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 12914223 - 12914168
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||| |||||||||||||||||||| ||||| |||||| ||| ||||||||||    
T  12914223 aatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttt 12914168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 39167644 - 39167589
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||||||||||| ||| || ||| ||||||||||||| ||||||    
T  39167644 aatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttt 39167589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 10406909 - 10406796
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| |||||| |||||| |||||| |||  ||||| ||||||||||||| ||||    || |||| | ||||||| ||||| ||| ||||||||    
T  10406909 aaagagtgcccttaggacattggataaaagaataggaatagaaatattgtattgaaaaatggagaaaagtgataaatttaa-ttttttaaattcaaaata 10406811  T
Q  118 ttattgaatccaatg 132  Q
    || ||||||||||||    
T  10406810 ttgttgaatccaatg 10406796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 1759925 - 1759820
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| ||| ||||||||||||| ||||| ||||||| ||||    || |||| | ||||||||||||||||| ||||||| || || || |||||    
T  1759925 gggcattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaaccaat 1759826  T
Q  132 gtaaat 137  Q
    | ||||    
T  1759825 gcaaat 1759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 4421961 - 4422058
Alignment:
Q  28 cttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    ||||||||||||| ||| ||||||||||||| ||||| | ||||  ||||  | || |||| | |||||||||||||| |||||||||| || |||||    
T  4421961 cttagggcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttacaaatcaaaatgttgttgaa 4422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 25568308 - 25568393
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||||||  ||||| | ||||| |||| || || |||| |  |||||||||||||||||||||||| |||||||| ||||||    
T  25568308 ggataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaaaccaatg 25568393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 10163686 - 10163738
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    |||||||||||||||||| ||||||||||  ||||| |||| |||||||||||    
T  10163686 gaatttaactttttaaaagtcaaaatattgctgaattcaatataaatatacta 10163738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 39567951 - 39567896
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||||||||||| ||| ||||| |||||| ||| || |||||||    
T  39567951 aatttaactttttaaaaatcaaaacattgttgaaaccaatgcaaacatgctacttt 39567896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 10979876 - 10979834
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||||  |||||||||| |||||||||||||||||||||    
T  10979876 tgaatttaaaattttaaaaattaaaatattattgaatccaatg 10979834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 25017293 - 25017391
Alignment:
Q  33 ggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    |||||||| |||  |||||||||||| ||||| ||||||  ||||  | || |||| | ||||||||||||||||| |||||||||  ||||| |||||    
T  25017293 ggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaccaat 25017391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 678571 - 678454
Alignment:
Q  19 aagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatat 118  Q
    |||||||| ||||  ||||||||||| |||| |||||||| | | ||||||||  ||||  | || |||  |||||||||| |||||||| | |||| ||    
T  678571 aagagtgcccttaaagcattggttaagaggacaaaaatagaattgttgtattggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaat 678472  T
Q  119 tattgaatccaatgtaaa 136  Q
    | ||||||||| ||||||    
T  678471 tgttgaatccattgtaaa 678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 8454568 - 8454621
Alignment:
Q  79 ataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||| |||| || ||||||||||||||| || ||||||||||| |||||||||    
T  8454568 ataaaaagtgatggatttaactttttaaacattaaaatattattaaatccaatg 8454621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 17168798 - 17168697
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| |||| |||||||||||| | |||| |||||| ||||||| ||||| |||   | || | || ||||||| ||||||||||| | ||||||    
T  17168798 aaagagtgcacttaaggcattggttaagaagatacaaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttgactttttaaaatttaaaata 17168699  T
Q  118 tt 119  Q
    ||    
T  17168698 tt 17168697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 17606011 - 17605970
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||||||||||||| | ||||||||||||||| ||||    
T  17606011 tgaatttaactttttaaaagttaaaatattattgaattcaat 17605970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 3241951 - 3242059
Alignment:
Q  29 ttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcc 128  Q
    ||||| ||||| |||| | ||||||||||  ||||||| |||| ||| || | || | || |||||| |||||||||||| | |||||||| |||||| |    
T  3241951 ttaggacattgattaagacgataaaaataaaaatattgcattgggaagtagtgaaaattgatgaattaaactttttaaaagttaaaatattgttgaattc 3242050  T
Q  129 aatgtaaat 137  Q
    |||| ||||    
T  3242051 aatgaaaat 3242059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 15310995 - 15311047
Alignment:
Q  92 aatttaactttttaaaaatc-aaaatattattgaatccaatgtaaatatacta 143  Q
    |||||||||||| ||||||  |||||||||||||||| ||||||||| |||||    
T  15310995 aatttaacttttaaaaaatttaaaatattattgaatctaatgtaaatttacta 15311047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 43414125 - 43414165
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||||||||||||||||||||| || ||||| ||||||    
T  43414125 aatttaactttttaaaaatcaaaatgttgttgaaaccaatg 43414165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 18774 - 18890
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||| ||||   | || |||| ||||||||||||||||||||| ||||||    
T  18774 aaagagtgcccttagggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaata 18873  T
Q  118 ttattgaatccaatgta 134  Q
    || ||||||||||||||    
T  18874 ttgttgaatccaatgta 18890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 45899530 - 45899660
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataat-aaagagtggtgaatttaactttttaaaaatcaaaat 116  Q
    ||||||||||||| ||||||||| ||| || |||||||||| |||||| |||||  |||| || ||| |||| ||||||||| ||||||||| |||||||    
T  45899530 aaagagtgctcttggggcattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaat 45899629  T
Q  117 attattgaatccaatgtaaatatactacttt 147  Q
    ||| |||||| ||||||||| ||||||||||    
T  45899630 attgttgaattcaatgtaaacatactacttt 45899660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 18946 - 19031
Alignment:
Q  49 ataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgta 134  Q
    |||||||||| ||||||| |||| ||||   | || |||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  18946 ataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatgta 19031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 34060768 - 34060887
Alignment:
Q  34 gcattggttaaaaggataaaaa-tagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||||||| | |||||||| ||  ||||||||||||| ||||  | || |||| ||||||||||||||||||| | |||||||| |||||| |||||    
T  34060768 gcattggttaagaagataaaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatg 34060867  T
Q  133 taaatatactactttcaatt 152  Q
     ||| | |||||||| ||||    
T  34060868 caaacaaactacttttaatt 34060887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 13647039 - 13647155
Alignment:
Q  34 gcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttt---taaaaatcaaaatattattgaatccaa 130  Q
    ||||| ||||| ||||||||||||| ||||||| ||||| ||||| | || |||| ||||||||||||||   ||||||| |||| ||| |||||| |||    
T  13647039 gcatttgttaagaggataaaaatagaaatattggattgaaaaatagtgaaaagtgatgaatttaactttttactaaaaattaaaacattgttgaattcaa 13647138  T
Q  131 tgtaaatatactacttt 147  Q
    | ||||  |||||||||    
T  13647139 tataaacctactacttt 13647155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 46365358 - 46365268
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaa 108  Q
    |||||||||  |||| |||||| |||| || | |||||||| ||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  46365358 aaagagtgcctttagagcattgtttaagagaacaaaaatagaaatattgtattgagaaatggtaaaacgtggtgaattgaactttttaaaa 46365268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 11675410 - 11675321
Alignment:
Q  41 ttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||| |||||||||||| ||||||||||||| ||||  ||||   ||  |||||||||||||||||  |||||||||| ||||||||||||    
T  11675410 ttaaagggataaaaatagaaatattgtattgaaaaatggtaaaa--tgacgaatttaactttttaaatgtcaaaatattgttgaatccaatg 11675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 36730150 - 36730269
Alignment:
Q  28 cttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatc 127  Q
    |||| |||||||| |||  |||||||||||  ||||| ||||||| ||||  | || |||| | ||||||||||||||||| ||||||| || ||||| |    
T  36730150 cttatggcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaac 36730249  T
Q  128 caatgtaaatatactacttt 147  Q
    ||||| ||| || |||||||    
T  36730250 caatgcaaacatgctacttt 36730269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 4759853 - 4759951
Alignment:
Q  34 gcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||| |||| |||||||||||| ||||| | ||||| ||||  | || |||| | ||||||||||||||||| ||||||| || ||||| ||||||    
T  4759853 gcattggataaagggataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 4759951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 11317016 - 11316974
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  11317016 tgaatttaactttttaaaagtcaaaatattattgaatctaatg 11316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 39436559 - 39436465
Alignment:
Q  46 aggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatata 140  Q
    ||||||||||||| ||||||||||||| ||||  | || | |   |||||||||||||||||| ||| || |||||||||||  |||||||||||    
T  39436559 aggataaaaatagaaatattgtattgaaaaatggtgaaaaataaagaatttaactttttaaaagtcagaacattattgaatctgatgtaaatata 39436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 49976156 - 49976229
Alignment:
Q  46 aggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatt 119  Q
    ||||||||||||| | |||||||||||  |||  | || |||| ||||||||||||||||||| ||||||||||    
T  49976156 aggataaaaatagaattattgtattgactaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatatt 49976229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 51256061 - 51256189
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||||| |||||| |||| | ||||| ||||  || ||||||||| ||||  || || ||||  ||||| |||||||||||| |||||| |    
T  51256061 aaagagtgcccttagagcattgattaagatgataacaatataaacattgtattgggaaacgatgaaaagtgaagaatt-aactttttaaaagtcaaaaca 51256159  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || |||||| |||| ||||||||| |||||    
T  51256160 ttgttgaattcaatataaatataccacttt 51256189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 8498022 - 8498150
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttt-taaaaatcaaaat 116  Q
    ||||||| |||||| | |||||||||||||||||||||||| ||||||  || || ||||  | || || | ||||||||||||||  |||||  |||||    
T  8498022 aaagagtactcttaagacattggttaaaaggataaaaatagaaatattacatcgaaaaatggtgaaaagcgttgaatttaacttttgaaaaaaataaaat 8498121  T
Q  117 attattgaatccaatgtaaatatactact 145  Q
    ||| ||||||| |||| |||  |||||||    
T  8498122 attgttgaatctaatgcaaacctactact 8498150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 32415676 - 32415577
Alignment:
Q  33 ggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||| |||| |||||||||||| ||||| | ||||| ||||  | || |||  | ||||||||||||||||| ||||||| || ||||| ||||||    
T  32415676 ggcattggataaagggataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 32415577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 37509159 - 37509112
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatat 139  Q
    ||||||||||||||||| |||||||||| ||||| |||||| ||||||    
T  37509159 aatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaatat 37509112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 12051129 - 12051031
Alignment:
Q  49 ataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||| ||||| ||||||  ||||||| || | || | ||||||||||||||||||| ||||| || |||||  ||||| ||| || |||||||    
T  12051129 ataaaaatagaaatatagtattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttt 12051031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 34750311 - 34750357
Alignment:
Q  85 agtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    |||| |||||||||||||||| |||| |||||||| |||||||||||    
T  34750311 agtgatgaatttaactttttataaattaaaatattgttgaatccaat 34750357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 26850498 - 26850583
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatta 120  Q
    |||||||||| ||||||||||||  |||||| ||||   ||||  |||| |||| ||||||||| ||||||||| | |||||||||    
T  26850498 cattggttaataggataaaaatataaatattatattagaaaatggtaaaaagtgatgaatttaattttttaaaagttaaaatatta 26850583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 27863989 - 27864042
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattg 71  Q
    ||||||||| |||| |||||||||||| |||||||||| || ||||||| ||||    
T  27863989 aaagagtgcccttaaggcattggttaagaggataaaaaaagaaatattgcattg 27864042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 4542358 - 4542454
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||| |||||||||||||| ||  ||||||||||| | | || || || | || ||||||| ||||||||||| |  ||||||| ||||||||||||    
T  4542358 attgattaaaaggataaaattaaaaatattgtattaaaagatgatgaaaaatgatgaatttgactttttaaaagtttaaatattgttgaatccaatg 4542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 8847468 - 8847568
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||| |||||   ||||  ||||  |||| |||| | ||||||||||||||||| | |||||||| |||||  ||||||||| || ||||||    
T  8847468 ggataaaaatagaaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgtaaacatgctactt 8847567  T
Q  147 t 147  Q
    |    
T  8847568 t 8847568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 33633846 - 33633954
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgta 134  Q
    |||| ||||| || ||| |||||||||||||| ||||| |||| ||||| | |  ||||||||||| ||| ||| |  ||||||| ||||||||| || |    
T  33633846 catttgttaagagaatacaaatagtaatattgcattgaaaaatgataaaaaataatgaatttaactcttttaaagttgaaatattgttgaatccattgca 33633945  T
Q  135 aatatacta 143  Q
    ||| |||||    
T  33633946 aatctacta 33633954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 35675177 - 35675306
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||| ||| ||| ||||||||||||| | ||||||||||| |||||||||||| |||||| | || |||| ||||||||||||||||||| | ||||||    
T  35675177 aaagactgcccttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaactttttaaaagttaaaata 35675276  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || |||||| ||||| ||| ||||||||||    
T  35675277 ttgttgaattcaatgcaaacatactacttt 35675306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 31010414 - 31010543
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||| | ||||||||||| | ||||||||||| || ||||||||||||||| ||||| ||||  |||||||||||||||||| |||||| |    
T  31010414 aaagagtgcccttggagcattggttaagatgataaaaatagaaacattgtattgagaaatgataaaaagtgaagaatttaactttttaaaagtcaaaaca 31010513  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    ||  |||||   |||||||||| |||||||    
T  31010514 ttgctgaattatatgtaaatatgctacttt 31010543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 13498120 - 13498222
Alignment:
Q  34 gcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgt 133  Q
    ||||||||||| | ||||||||||| ||||||||||||  ||||| ||||||  | ||||||||||||||||||| ||||||  || |||||||||||||    
T  13498120 gcattggttaagatgataaaaatagaaatattgtattggaaaatagtaaagaacgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 13498219  T
Q  134 aaa 136  Q
    |||    
T  13498220 aaa 13498222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 30618071 - 30617957
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||||||||||||||||| |||||||| |||| ||||||| |||| ||||| || || ||   ||||||||||||||||||| |  |||||    
T  30618071 aaagagtgcccttagggcattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaactttttaaaagttcaaata 30617972  T
Q  118 ttattgaatccaatg 132  Q
    || ||||||||||||    
T  30617971 ttgttgaatccaatg 30617957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 30199791 - 30199891
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaa 135  Q
    |||| |||| ||||||||||||  ||||||| ||||| |||| ||||| |||| |||| |||| ||||||||| | ||||||||||||||||||||||||    
T  30199791 attgtttaagaggataaaaatataaatattgcattgaaaaatgataaaaagtgatgaaattaattttttaaaagttaaaatattattgaatccaatgtaa 30199890  T
Q  136 a 136  Q
    |    
T  30199891 a 30199891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 51018384 - 51018500
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaa 135  Q
    ||||||||| | ||||||||||| || |||| ||||| ||||  | || ||||  |||||||||||||||||||| |||| ||| |||||| ||||||||    
T  51018384 attggttaagatgataaaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaa 51018483  T
Q  136 atatactactttcaatt 152  Q
    |||||||||||| ||||    
T  51018484 atatactacttttaatt 51018500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 27545984 - 27545855
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaacttttt-aaaaatcaaaat 116  Q
    |||||||||||||| | ||||  |||| ||||||||||||| ||||||| ||||| |||| ||||| |||| ||||||||||||||| |||| | |||||    
T  27545984 aaagagtgctcttaagacatttattaagaggataaaaatagaaatattgcattgaaaaatgataaa-agtgatgaatttaactttttgaaaacttaaaat 27545886  T
Q  117 attattgaatccaatgtaaatatactacttt 147  Q
    ||| |||||||| ||| |||  |||||||||    
T  27545885 attgttgaatcctatgaaaacctactacttt 27545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 31494648 - 31494777
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||||||| ||||||| ||||| | ||||||||||| || ||||||||  |||||  | || ||||  |||||||||||||||||   ||||| |    
T  31494648 aaagagtgctcttggggcattagttaagatgataaaaatagaaacattgtatttggaaatggtgaaaagtgaagaatttaactttttaaatgacaaaaca 31494747  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || |||||| ||||||||||||| ||||||    
T  31494748 ttgttgaattcaatgtaaatatattacttt 31494777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 966662 - 966575
Alignment:
Q  60 aatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||| ||||| |||| ||||| | |  ||||||||||||||||||||| |||||||| |||||||||||| |||  |||||||||    
T  966662 aatattgcattgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttt 966575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 26040361 - 26040476
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| |||  |||||||||||| ||||| ||||||  ||||  | || |||| | | ||||||||||||||| |||||||||| ||||| |||||    
T  26040361 gggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataagtttaactttttaaaagtcaaaatattgttgaagccaat 26040460  T
Q  132 gtaaatatactacttt 147  Q
    | |||||| |||||||    
T  26040461 gcaaatatgctacttt 26040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 23260827 - 23260697
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagag-tggtgaatttaactttttaaaaatcaaaat 116  Q
    ||||| |||||||||  ||||| |||| | ||||||||||  ||||||| ||||||||||  | || || || ||||||||||||||||||| | |||||    
T  23260827 aaagaatgctcttagaacattgattaagatgataaaaataaaaatattgcattgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaat 23260728  T
Q  117 attattgaatccaatgtaaatatactacttt 147  Q
    |||||| ||| |||| ||||| |||| ||||    
T  23260727 attattaaattcaatttaaatttacttcttt 23260697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 40593723 - 40593595
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||| | |||||| |||||| |||  |||||| |||||||||||| |||||| | || |||| |||||||||| |||||||| ||| |||     
T  40593723 aaagagtgcccttggagcattgattaaaaagattgaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaac-ttttaaaagtcataatg 40593625  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || || ||| |||||||||  |||||||||    
T  40593624 ttgtttaattcaatgtaaaattactacttt 40593595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23690979 - 23691031
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    ||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||    
T  23690979 gaatttaaccttttaaaaatcaaaacattgttgaattcaatgtaaatatacta 23691031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 31755031 - 31754931
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||  ||||| | ||||| |||| || || |||| | ||||||||||||||||| |||||||||| ||||| |||||| ||| || ||||||    
T  31755031 ggataaaaatataaatatagaattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctactt 31754932  T
Q  147 t 147  Q
    |    
T  31754931 t 31754931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 15986346 - 15986259
Alignment:
Q  60 aatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||| ||||  | || |||||||||||||| ||||||||| ||| |||||| |||||| ||||| ||| || |||||||    
T  15986346 aatattgtattgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttt 15986259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 29462912 - 29462805
Alignment:
Q  29 ttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcc 128  Q
    ||||||||||| |||| ||||||||||||  |||||| |||||| |||| || || | ||  |||||| | ||||| ||| ||||||| || ||||||||    
T  29462912 ttagggcattgtttaagaggataaaaataaaaatattatattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatcc 29462813  T
Q  129 aatgtaaa 136  Q
    ||||||||    
T  29462812 aatgtaaa 29462805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 52341705 - 52341598
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaa 135  Q
    ||||||| | |||||| |||||| |||||| | |||  |||| || || | || ||||||||||||||||||| ||||||| || |||||||||||| ||    
T  52341705 attggttgagaggatacaaatagaaatattatgttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaa 52341606  T
Q  136 atatacta 143  Q
    | ||||||    
T  52341605 acatacta 52341598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 54339161 - 54339106
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||| ||||||||| |||||||||| ||||| ||||||||||||| |||||||    
T  54339161 aatttaattttttaaaagtcaaaatatttttgaaaccaatgtaaatatgctacttt 54339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 20435795 - 20435881
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattatt 122  Q
    ||||||||||| ||||||||||| || ||||| |||  ||||  | || ||||  ||||||||||||||||||||||||| ||||||    
T  20435795 attggttaaaaagataaaaatagaaacattgtcttggaaaattgtgaaaagtgaagaatttaactttttaaaaatcaaaacattatt 20435881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 39158388 - 39158442
Alignment:
Q  93 atttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||||| |||||||| || ||| ||||||||| ||||||||||    
T  39158388 atttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttt 39158442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 3684648 - 3684541
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaa 135  Q
    ||||||||||| |||||||   | |||||| ||||||||||| || || | || | ||||||||||||||||||| |||| |||||||||| |||| |||    
T  3684648 attggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaaat-aaaaaattattgaattcaatataa 3684553  T
Q  136 atatactacttt 147  Q
    | ||| ||||||    
T  3684552 acataatacttt 3684541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 36486746 - 36486795
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatata 140  Q
    |||||||| ||||||||| ||||||||||||||||| | |||||||||||    
T  36486746 gaatttaattttttaaaagtcaaaatattattgaattctatgtaaatata 36486795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 55120213 - 55120088
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||| || ||||| || ||||||||| | |||||||||   ||||||||||||| ||||| | || | ||  |||||| ||||||||||| |||||| |    
T  55120213 aaagaatgttcttaaggtattggttaagatgataaaaattaaaatattgtattgaaaaatagtgaaaaatgaagaatttgactttttaaaagtcaaaaca 55120114  T
Q  118 ttattgaatccaatgtaaatatacta 143  Q
    || |||||| |||  |||||||||||    
T  55120113 ttgttgaattcaacataaatatacta 55120088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 48513730 - 48513618
Alignment:
Q  29 ttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcc 128  Q
    ||||| |||||||||| | ||||||||||  || |||||||||| |||| || || ||||    |||||||||||||||| |||||| ||| |||||| |    
T  48513730 ttaggacattggttaagacgataaaaataaaaacattgtattgaaaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattc 48513631  T
Q  129 aatgtaaatatac 141  Q
    |||| || |||||    
T  48513630 aatgcaagtatac 48513618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 1457537 - 1457636
Alignment:
Q  33 ggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||| |||| | ||||||||||| ||||||  ||||| || ||||||| | || | ||||||| ||||||||| | |||||||| |||||| |||||    
T  1457537 ggcattgattaagaagataaaaatagaaatattacattgaaaagtaataaaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatg 1457636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 19328989 - 19329044
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||| |||||||||| ||||| |||||| ||| || |||||||    
T  19328989 aatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttt 19329044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 23765626 - 23765571
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||||||||||| || ||||| |||||| ||| || |||||||    
T  23765626 aatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgctacttt 23765571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 30475517 - 30475418
Alignment:
Q  48 gataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||  ||||| ||||||| ||||  | || |||| | ||||||||||||||||  |||||||||| ||||| |||||| ||| ||| ||||||    
T  30475517 gataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttt 30475418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 34316784 - 34316839
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||| |||||||||| ||||| |||||| ||| || |||||||    
T  34316784 aatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttt 34316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 20435896 - 20435934
Alignment:
Q  105 aaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  20435896 aaaaatcaaaacattattgaattcaatgtaaatatacta 20435934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 22376376 - 22376286
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaa 108  Q
    ||||||||| ||||||||||||||||| || || ||||||| || | ||||||| |||||  | || ||| | ||||||| ||||||||||    
T  22376376 aaagagtgcccttagggcattggttaagagaattaaaatagaaaaaatgtattgggaaatggtgaaaagttgcgaatttatctttttaaaa 22376286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 20456663 - 20456562
Alignment:
Q  46 aggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactact 145  Q
    ||||||||||||| ||| || |||||| |||| || || |||  ||||||||| ||||||||  | |||||||| |||||| ||||| ||| || |||||    
T  20456663 aggataaaaatagaaatgttttattgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctact 20456564  T
Q  146 tt 147  Q
    ||    
T  20456563 tt 20456562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 51267016 - 51266939
Alignment:
Q  48 gataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    ||||||||||| ||||| ||||||| ||||  | || |||| | ||||||||||||||||| ||||||| || |||||    
T  51267016 gataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 51266939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 21760650 - 21760558
Alignment:
Q  60 aatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactttcaatt 152  Q
    ||||||||||| | ||||| |||| | || |  ||||||||||| |||||| |||| |||||| ||| |||||||||| ||| ||||| ||||    
T  21760650 aatattgtattaaaaaatagtaaaaaatgatagatttaacttttgaaaaattaaaaaattattaaattcaatgtaaatttaccacttttaatt 21760558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 33951793 - 33951709
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    |||||||||||| ||||| ||||||  ||||  | || |||| | ||||||||||||||||||| ||||| || ||||| |||||    
T  33951793 ggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaat 33951709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 45688836 - 45688736
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||| || || | ||||| |||| || || |||| | ||||||||||||||||| ||||||| || ||||| | |||| ||| || ||||||    
T  45688836 ggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctactt 45688737  T
Q  147 t 147  Q
    |    
T  45688736 t 45688736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 11659384 - 11659255
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||| | ||||| ||||| ||||||||||||  ||||||||||||| ||||| | || ||||  |||||||||||||||||||| ||||||    
T  11659384 aaagagtgcccttggagcattcgttaagaggataaaaataaaaatattgtattgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaata 11659285  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || |||||| ||||||||||||||| ||||    
T  11659284 ttgttgaattcaatgtaaatatactgcttt 11659255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 2239704 - 2239575
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||| |||||||||| |||||||||| |||||||| |||| ||||||| | ||| ||||  |||| | || ||||||||||||||||||| | ||||||    
T  2239704 aaagaatgctcttaggacattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaata 2239605  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || |||||||||||  ||||||||||||||    
T  2239604 ttgttgaatccaatacaaatatactacttt 2239575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 2805488 - 2805374
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaact--ttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||||| ||||||||||||  | ||||||||||| ||||||| || |||| |||||||||||  |||||||| |||||||||| ||||||| |||     
T  2805488 cattggttaagaggataaaaatataagtattgtattgaaaaataattaaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaata 2805389  T
Q  133 taaatatactacttt 147  Q
     ||| ||||||||||    
T  2805388 caaacatactacttt 2805374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 10900266 - 10900362
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    |||||||||||| |||||   ||||| |||| ||||| |||| ||||||| | ||||||||| | ||||||||||||||| ||||||||||||||||    
T  10900266 ggataaaaatagaaatatcacattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaatatacta 10900362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 12695298 - 12695350
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  12695298 gaatttaactttttaaaaatcaaaacattgttgaattcaatgtaaatatacta 12695350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 8327085 - 8326998
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattatt 122  Q
    |||||||||| ||||||||||||  |||||||  |||||||||||| || ||||   ||||||||||||||||| | |||||||||||    
T  8327085 cattggttaagaggataaaaataaaaatattgctttgagaaataatgaaaagtgaaaaatttaactttttaaaagttaaaatattatt 8326998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 17603903 - 17603826
Alignment:
Q  48 gataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    ||||||||||| ||||| | ||||| |||| ||||| | || | ||||||||||||||||| ||||||| ||||||||    
T  17603903 gataaaaatagaaatatagcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaatgttattgaa 17603826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 39085785 - 39085886
Alignment:
Q  24 tgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattg 123  Q
    ||||||| || |||||| |||| |||||||||||| |||||   ||||  |||| ||||| |||| | ||||||||||||||||| ||||||| || |||    
T  39085785 tgctcttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagtgataaatttaactttttaaaagtcaaaatgttgttg 39085884  T
Q  124 aa 125  Q
    ||    
T  39085885 aa 39085886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 16242010 - 16242066
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||||| |||||| |||||||||| | |  |||||||||||||||    
T  16242010 gaatttaactttttaaaagtcaaaacattattgaattccacataaatatactacttt 16242066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 30831723 - 30831639
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatt 119  Q
    |||||||||| |  |||||||||| ||||||| ||| | |||| ||||| | || ||||||||||||||||||| | ||||||||    
T  30831723 cattggttaacaaaataaaaatagaaatattgcattaaaaaattataaaaaatgatgaatttaactttttaaaagtaaaaatatt 30831639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 41436571 - 41436471
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||  ||||| ||||||| |||| || || |||| | || |||||||||||||| ||||||| || ||||| |||||| ||| || ||||||    
T  41436571 ggataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactt 41436472  T
Q  147 t 147  Q
    |    
T  41436471 t 41436471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 862701 - 862582
Alignment:
Q  28 cttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatc 127  Q
    ||||||||||||  |||  |||||||||||| ||||| ||||||  ||||  | || |||| | ||||||||||||||| | ||||||| || ||||| |    
T  862701 cttagggcattgaataatgggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgttgaaac 862602  T
Q  128 caatgtaaatatactacttt 147  Q
    ||||| ||| || |||||||    
T  862601 caatgcaaacatgctacttt 862582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 1729606 - 1729547
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaat 77  Q
    ||||||||||||||||||||||||||| |||| |||  ||| ||| ||||||||| ||||    
T  1729606 aaagagtgctcttagggcattggttaagaggacaaacttagaaatgttgtattgaaaaat 1729547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 27495171 - 27495116
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||| |||||||||||||||| || ||||| |||||| ||| ||||||||||    
T  27495171 aatttaacattttaaaaatcaaaatgttgttgaaaccaatgcaaacatactacttt 27495116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 34220633 - 34220740
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||| |||| |||| | |||||||||| ||||||||||||| ||| ||| |||| ||| |  | || |||| ||||||||| ||||||||| | ||||||    
T  34220633 aaagtgtgcccttaagacattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaatttaagtttttaaaagttaaaata 34220732  T
Q  118 ttattgaa 125  Q
    || |||||    
T  34220733 ttgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 40798385 - 40798439
Alignment:
Q  93 atttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||| |||||| ||| |||||| |||||||| ||||| |||||    
T  40798385 atttaactttttaaaagtcaaaacattgttgaattcaatgtaagtataccacttt 40798439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 2136530 - 2136445
Alignment:
Q  46 aggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||||||| ||||||| ||||  |||| || || ||||| |||||| |||||| |||| | |||||||| |||||| ||||    
T  2136530 aggataaaaatagaaatattgcattggaaaatgatgaaaagtggagaatttgacttttgaaaagtgaaaatattgttgaatacaat 2136445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 17457474 - 17457378
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaa-atcaaaatattattgaatccaatg 132  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||| ||| | ||||| | | ||||||||||||||  | |||||||| ||||| ||||||    
T  17457474 attggttaagaggataaaa-tagaaatattgtcttgagaaatgatagaaagtggcggaattaactttttaaaagttaaaaatattgttgaacccaatg 17457378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 17403070 - 17402941
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||| ||||||||||||||||||||  ||||||||||   ||||||||||| | ||||  |||| |||| ||||||||||||||||||| ||||||||    
T  17403070 aaagagggctcttagggcattggttaaggggataaaaattaaaatattgtattaaaaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaata 17402971  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || ||||||| ||||||||  |||||||||    
T  17402970 ttgttgaatctaatgtaaaactactacttt 17402941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 43168263 - 43168134
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||||||||||||||||| | ||||||||||| || ||||||||| |||||  | || ||||  || ||||||||||||||| |||||| |    
T  43168263 aaagagtgcccttagggcattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtgaagagtttaactttttaaaagtcaaaaca 43168164  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || |||||| ||||||||||||||||||||    
T  43168163 ttgttgaattcaatgtaaatatactacttt 43168134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 14331959 - 14331834
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||| ||||||||||||||| ||||||||||| || ||||||||| |||||  | || | ||  |||||||||||||||||| |||||| |    
T  14331959 aaagagtgcccttggggcattggttaaaatgataaaaatagaaacattgtattgggaaatggtgaaaaatgaagaatttaactttttaaaagtcaaaaca 14331860  T
Q  118 ttattgaatccaatgtaaatatacta 143  Q
    || |||||| ||||||||||||||||    
T  14331859 ttgttgaattcaatgtaaatatacta 14331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 44359656 - 44359781
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||| || |||||||||| | ||||||||||| || ||||||| | |||||  | || ||||  |||||||||||||||||| |||||| |    
T  44359656 aaagagtgcccttgggccattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaactttttaaaagtcaaaaca 44359755  T
Q  118 ttattgaatccaatgtaaatatacta 143  Q
    || |||||| ||||||||||||||||    
T  44359756 ttgttgaattcaatgtaaatatacta 44359781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 26469584 - 26469695
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaa 135  Q
    ||||| |||| |||||||||||  ||||| | ||||| ||||||| || | || | ||||||||||||||||| |||||||||||||||| |||||| ||    
T  26469584 attggataaagggataaaaataaaaatatagcattgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaa 26469683  T
Q  136 atatactacttt 147  Q
    | ||||||||||    
T  26469684 acatactacttt 26469695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 40920297 - 40920178
Alignment:
Q  30 tagggcattggttaaaaggataaaaatagtaatattgtattgagaaataat--aaagagtggtgaatttaactttttaaaaatcaaaatattattgaatc 127  Q
    |||| |||||||||| ||||||||||||| ||||||| |||||||| |  |  |||| ||| | ||||||||||||||||| | |||||||| |||||||    
T  40920297 taggacattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatc 40920198  T
Q  128 caatgtaaatatactacttt 147  Q
    ||||| ||||  ||||||||    
T  40920197 caatgcaaatccactacttt 40920178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 52396549 - 52396458
Alignment:
Q  33 ggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    |||||||| |||  |||||||||||| ||||| ||||||| |||| ||||| |||| | ||||||||||||||||| ||||||||||||||||    
T  52396549 ggcattggataaggggataaaaatagaaatatagtattgaaaaatgataaa-agtgataaatttaactttttaaaagtcaaaatattattgaa 52396458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 16691413 - 16691308
Alignment:
Q  21 gagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatta 120  Q
    |||||| ||| ||||||||||||| | ||||||||||| || ||||||||| |||||  |||| | ||  |||||||||||||||||| |||||| |||     
T  16691413 gagtgcccttggggcattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattg 16691314  T
Q  121 ttgaat 126  Q
    ||||||    
T  16691313 ttgaat 16691308  T

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Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 41898844 - 41898951
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||| ||||||| | |||||||| |  ||| |||||| ||||||||||||| ||||  |||| |||| ||||||||||||||||||| | ||||||    
T  41898844 aaagagtgttcttaggacgttggttaagaa-atacaaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaata 41898942  T
Q  118 ttattgaat 126  Q
    || ||||||    
T  41898943 ttgttgaat 41898951  T

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Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 40845344 - 40845261
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaa 130  Q
    |||||||||||| ||||| ||||||| ||||  | || |||| | |||||||||||||||||||||||||||| ||||| ||||    
T  40845344 ggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttgaaaccaa 40845261  T

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Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 41147476 - 41147591
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| |||  |||||||||||| ||||| | ||||| ||||  |||| | || | ||||||||||||||||| |||||||||| ||||| |||||    
T  41147476 gggcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaaaccaat 41147575  T
Q  132 gtaaatatactacttt 147  Q
    | ||| || |||||||    
T  41147576 gcaaacatgctacttt 41147591  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 43433891 - 43433768
Alignment:
Q  24 tgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattg 123  Q
    ||||||| ||||||||| |||  |||||||||||| ||||| ||||| | ||||  | || |||| | ||||||||||||||||||| ||||| || |||    
T  43433891 tgctcttggggcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttg 43433792  T
Q  124 aatccaatgtaaatatactacttt 147  Q
    || |||||  ||| ||||||||||    
T  43433791 aaaccaatacaaacatactacttt 43433768  T

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Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 48938757 - 48938629
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||||||||  |||||| ||||| | ||||||||||| |||||||||||   ||||  | || ||||   |||||| |||||||||| |||||| |    
T  48938757 aaagagtgctctttaggcattagttaagatgataaaaatagaaatattgtattagaaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaaca 48938659  T
Q  118 ttattgaatccaatgtaaatatactacttt 147  Q
    || ||||||  |||||||||||||||||||    
T  48938658 ttgttgaatttaatgtaaatatactacttt 48938629  T

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Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 31975559 - 31975508
Alignment:
Q  68 attgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatt 119  Q
    ||||| |||| ||||| |||||| ||||||||||||||||||||||||||||    
T  31975559 attgaaaaatgataaaaagtggtaaatttaactttttaaaaatcaaaatatt 31975508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 51424245 - 51424150
Alignment:
Q  52 aaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||| ||||||||||||| ||||    || |||| ||||||||||||||||||  | |||| ||| |||||||||||||||| ||| ||||||    
T  51424245 aaaatagaaatattgtattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttt 51424150  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 28277484 - 28277573
Alignment:
Q  36 attggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    ||||| ||| ||||||||||||| |||||   ||||| |||| ||||| |||| | ||||||||||||||||||| ||||| || |||||    
T  28277484 attggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 28277573  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 50295431 - 50295524
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    ||||||||| |||  || ||||||||| ||||| ||||||  ||||| | || |||| | ||||||||||||||||| |||||||||| |||||    
T  50295431 gggcattggataagggggtaaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 50295524  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 7190473 - 7190549
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaa 108  Q
    ||||||||||||| ||||||||||||| ||||| | ||| | |||| || || |||| | |||||||||||||||||    
T  7190473 gggcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaatttaactttttaaaa 7190549  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 8892828 - 8892884
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||||| |||||| ||| || ||| |||| |||||||||||||||    
T  8892828 gaatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactacttt 8892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 25177478 - 25177562
Alignment:
Q  63 attgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||| | || | ||  ||| |||| ||||||||| |||||| ||  |||||| ||||||||||||||||||||    
T  25177478 attgtattgagaaatagtgaaaaatgaagaaattaattttttaaaagtcaaaacatcgttgaattcaatgtaaatatactacttt 25177562  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 21268279 - 21268338
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaat 77  Q
    ||||||||| ||||||||||||||||| |||| |||  ||| ||| ||||||||||||||    
T  21268279 aaagagtgcccttagggcattggttaagaggacaaacttagaaatgttgtattgagaaat 21268338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 41493030 - 41492921
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| |||| |||||||||||| ||||| ||||||| ||||||| |||| ||| |  | || |||| ||||||| || |||||||| | ||||||    
T  41493030 aaagagtgcccttaaggcattggttaagaggat-aaaatagaaatattgcattgggaagtggtgaaaagtgatgaattttacattttaaaagttaaaata 41492932  T
Q  118 ttattgaatcc 128  Q
    ||  |||||||    
T  41492931 ttgatgaatcc 41492921  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 2125700 - 2125789
Alignment:
Q  27 tcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaat 116  Q
    |||| ||||||||| |||  |||||||||||| ||||| | ||||| ||||  | || |||| | ||||||||||||||||| |||||||    
T  2125700 tcttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaat 2125789  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 10160977 - 10161050
Alignment:
Q  45 aaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatat 118  Q
    |||||| ||||||| ||| ||||||||| |||| ||  | || ||||||||||||||||||||| | |||||||    
T  10160977 aaggattaaaatagaaattttgtattgaaaaatgatcgaaagaggtgaatttaactttttaaaagttaaaatat 10161050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 11386074 - 11385974
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||| ||||| | ||||  ||||  |||| | || | ||||||||||||||||| ||||||| || ||||| |||||| ||| || ||||||    
T  11386074 ggataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactt 11385975  T
Q  147 t 147  Q
    |    
T  11385974 t 11385974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 33930059 - 33929959
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||  ||||| | ||||| ||||| | || | || | ||||||||||||||||| ||||||| || ||||| |||||| ||| || ||||||    
T  33930059 ggataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactt 33929960  T
Q  147 t 147  Q
    |    
T  33929959 t 33929959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 44286920 - 44286880
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||||||||||||||| ||||||||||| || ||||||    
T  44286920 aatttaactttttaaaaattaaaatattattaaaaccaatg 44286880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 11332796 - 11332909
Alignment:
Q  33 ggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||  |  | ||||  |||||||||||||||||| |||||| ||| |||||| ||||     
T  11332796 ggcattggttaagaagataaaaatagaaatattgtattgagaaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaata 11332895  T
Q  133 taaatatactactt 146  Q
    ||||||||||||||    
T  11332896 taaatatactactt 11332909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 37922988 - 37923045
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  37922988 tgaatttaactttttagaagtcaaaatattattgaatccaatgcaaacatactacttt 37923045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 38870112 - 38869997
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    |||||||| |||| | ||||||||||| || |||| ||||  |||| || || ||||  ||||| ||| |||||||| ||||||||||  ||||| ||||    
T  38870112 gggcattgattaagatgataaaaatagaaacattgcattggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaat 38870013  T
Q  132 gtaaatatactacttt 147  Q
    ||||||||||||||||    
T  38870012 gtaaatatactacttt 38869997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 7532907 - 7532817
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaa 108  Q
    |||||||| ||||||||||||||||||  |||||||||||| ||||||||||||  ||||  | || |||| ||||||||  |||||||||    
T  7532907 aaagagtgttcttagggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttaggtttttaaaa 7532817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 11295451 - 11295576
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||  |||| | |||||||||  | ||| ||||||  || ||||||||||||||| || || | || ||||||||||||||||||| |||||| |    
T  11295451 aaagagtgtccttaagacattggttacgatgatgaaaatataaacattgtattgagaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaaca 11295550  T
Q  118 ttattgaatccaatgtaaatatacta 143  Q
     | |||||| |||| |||||||||||    
T  11295551 atgttgaattcaatataaatatacta 11295576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 24305046 - 24304935
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgta 134  Q
    ||||| |||| | ||||||||| | ||||||||||||| |||   | || ||||  ||||||||||||| ||| |||||||| || |||||| |||||||    
T  24305046 cattgattaagatgataaaaatggaaatattgtattgaaaaacggtgaaaagtgaagaatttaactttt-aaagatcaaaattttgttgaattcaatgta 24304948  T
Q  135 aatatactacttt 147  Q
    |||||||||||||    
T  24304947 aatatactacttt 24304935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 45338052 - 45337997
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||||||||||| |||||||  |||||| ||| ||||||||||    
T  45338052 aatttaactttttaaaaatcaaaatgttattgagaccaatgcaaacatactacttt 45337997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 26892885 - 26892783
Alignment:
Q  41 ttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatata 140  Q
    |||| ||||||||||||| |||||  |||||| ||||  |||| | || | ||||||||||||||||| | |||||||||||||| | ||| |||| |||    
T  26892885 ttaagaggataaaaatagaaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaactaatataaacata 26892786  T
Q  141 cta 143  Q
    |||    
T  26892785 cta 26892783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 39972139 - 39972264
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||| ||||||||||||||||| | || |||  ||| ||| |||||||| |||||  | || |||| ||||||| ||||||||||| | |||| |    
T  39972139 aaagagtgcccttagggcattggttaagaagacaaatttagaaatgttgtattgggaaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaa 39972238  T
Q  118 ttattgaatccaatgtaaatatacta 143  Q
    || || ||| ||||| ||| ||||||    
T  39972239 ttgttcaattcaatgcaaacatacta 39972264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 19389311 - 19389426
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| |||  |||||||||||| ||||| ||||||  ||||  | || |||| | ||||||||||||||||| |||||||||  |||||  ||||    
T  19389311 gggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaacaat 19389410  T
Q  132 gtaaatatactacttt 147  Q
    | ||| || |||||||    
T  19389411 gcaaacatgctacttt 19389426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 6841706 - 6841791
Alignment:
Q  41 ttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatc 127  Q
    |||| ||||||||||||| |||||||||||   |||| || || |||| || || |||||||||||||||| |||||||||| ||||    
T  6841706 ttaagaggataaaaatagaaatattgtattagaaaatgatgaaaagtgatgtatataactttttaaaaatc-aaatattattaaatc 6841791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 30351637 - 30351584
Alignment:
Q  94 tttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||| | |||||||| |||||||||||| ||| ||| ||||||    
T  30351637 tttaactttttaaaagttaaaatattgttgaatccaatgcaaacatattacttt 30351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 35455318 - 35455277
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| ||||||||| |||||||| |||||||||||||    
T  35455318 tgaatttaattttttaaaagtcaaaataatattgaatccaat 35455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 36766633 - 36766698
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaa 83  Q
    ||||||||||||||||| |||| |||| ||||||||  ||| ||| ||||||||| |||| |||||    
T  36766633 aaagagtgctcttagggtattgattaagaggataaatttagaaatgttgtattgaaaaatgataaa 36766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 40550378 - 40550471
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaa 125  Q
    ||||||| ||||| |||||||||||   ||||||||||| |||||| || || | | |||||||||| |||||||||   |||||||| |||||    
T  40550378 gggcattagttaagaggataaaaatttaaatattgtattaagaaatgatgaaaaatagtgaatttaaatttttaaaagataaaatattgttgaa 40550471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 25249402 - 25249442
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
T  25249402 aatttaactttttaaaagtcaaaatattgttgaaaccaatg 25249442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 27127510 - 27127619
Alignment:
Q  34 gcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgt 133  Q
    |||||| |||| | ||||||||||| ||||||||||||||||||  | || | || ||||||||||||||||||| |||| ||||| ||||||||| |||    
T  27127510 gcattgtttaagatgataaaaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgttgaatccattgt 27127609  T
Q  134 aaatatacta 143  Q
    ||| ||||||    
T  27127610 aaaaatacta 27127619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 12226332 - 12226443
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||| ||||| | ||||||||||| || ||||||||||||||| || || ||||  |||||||||||||| ||| | |||| ||| |||||| ||||    
T  12226332 gggcattagttaagatgataaaaatagaaacattgtattgagaaatgattaaaagtgaagaatttaactttttgaaagtaaaaacattgttgaattcaat 12226431  T
Q  132 gtaaatatacta 143  Q
    ||||||||||||    
T  12226432 gtaaatatacta 12226443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 28014757 - 28014643
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||||  |||||||||||||||| ||| ||||| ||| |||||||||||| |||||  | || | || ||| ||| ||||||||||| | ||||||    
T  28014757 aaagagtgcctttagggcattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaata 28014658  T
Q  118 ttattgaatccaatg 132  Q
    || ||||||||||||    
T  28014657 ttgttgaatccaatg 28014643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 6507396 - 6507505
Alignment:
Q  38 tggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaat 137  Q
    ||||||| | ||||||||||| ||  ||| |||| |||||| | || ||||   |||||||||||||||||||||||| ||| |||||| ||||||| ||    
T  6507396 tggttaagatgataaaaatagaaactttgcattgggaaatattgaaaagtgaaaaatttaactttttaaaaatcaaaacattgttgaattcaatgtatat 6507495  T
Q  138 atactacttt 147  Q
    ||||||||||    
T  6507496 atactacttt 6507505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 34780038 - 34780094
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||||||||||||| | |||| ||| |||||| ||||||||||||||||||||    
T  34780038 gaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttt 34780094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 31220328 - 31220443
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| ||| |||||  |||| | ||||| || |||| ||||  |||| |||| ||||||||||||||||||| | ||||| |||||||||  |||    
T  31220328 gggcattggataagaggatggaaatggaaatatcgttttgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatgttattgaataaaat 31220427  T
Q  132 gtaaatatactacttt 147  Q
    | ||| ||||||||||    
T  31220428 gcaaacatactacttt 31220443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 5578367 - 5578267
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||| ||||| | ||||| ||||||| |  | || | ||||||||||||||||| |||||||||| ||||| | |||| ||| || ||||||    
T  5578367 ggataaaaatagaaatatagcattgaaaaataatgagaattgataaatttaactttttaaaagtcaaaatattgttgaaacaaatgcaaacatgctactt 5578268  T
Q  147 t 147  Q
    |    
T  5578267 t 5578267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 10855525 - 10855426
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||| |||||  |||||| |||| || || |||| | ||||||||||||||||| ||||||| || ||||| || ||| |||||| ||||||    
T  10855525 ggataaaaatagaaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaacc-atgcaaatatgctactt 10855427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 21186066 - 21186118
Alignment:
Q  80 taaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||| |||| ||||||||||||||||||| | |||||||||||||||| ||||    
T  21186066 taaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatg 21186118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 29692342 - 29692426
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaat 116  Q
    ||||||||| |||| |||||||||||| ||||| ||||||| ||||  | || |||| | ||||||||||||||| | |||||||    
T  29692342 gggcattggataaatggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaagagtcaaaat 29692426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 29964349 - 29964301
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatata 140  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||||||||    
T  29964349 aatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatata 29964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 7875201 - 7875282
Alignment:
Q  51 aaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||| ||||| | ||||  |||| || || |||| | ||||||||||||||||| |||||||||| ||||| ||||||    
T  7875201 aaaaatagaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatg 7875282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 12175653 - 12175553
Alignment:
Q  46 aggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactact 145  Q
    ||||||||||||  ||||| ||||||| |||| ||||| | || | ||||||||||||||||| | ||||  ||||| || |||||| ||| ||||||||    
T  12175653 aggataaaaatataaatatagtattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa-gttattaaaaccaatgcaaacatactact 12175555  T
Q  146 tt 147  Q
    ||    
T  12175554 tt 12175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 12775215 - 12775131
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatt 119  Q
    |||||||||| ||||||||||||  ||||||||||| | || | || || | || | ||||||||||||||||| | ||||||||    
T  12775215 cattggttaagaggataaaaatataaatattgtattaaaaactgatgaaaaatgattaatttaactttttaaaacttaaaatatt 12775131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 1907576 - 1907690
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||||||||  | |||||| |||||||||||||| || ||||||||||||| ||||  |||| | |  ||||||||| ||||||| ||||||||||    
T  1907576 aaagagtgctcttgagacattggataaaaggataaaaagagaaatattgtattgaaaaatggtaaaaaataatgaatttaattttttaataatcaaaata 1907675  T
Q  118 ttattgaatccaatg 132  Q
    || |||||| |||||    
T  1907676 ttgttgaatgcaatg 1907690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 5240334 - 5240448
Alignment:
Q  33 ggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    |||||||| |||| |||||||||||| ||||| ||||||| ||||  | || |||| | ||||||||||||||||| ||||||| |||||||| ||||||    
T  5240334 ggcattggataaagggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaaccaatg 5240433  T
Q  133 taaatatactacttt 147  Q
     ||| || |||||||    
T  5240434 caaacatgctacttt 5240448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 18800166 - 18800246
Alignment:
Q  48 gataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcca 129  Q
    ||||||||||| ||||||||||| | ||||||||||||||| | ||||||||||||||||||| | |||||| |||||||||    
T  18800166 gataaaaatagaaatattgtattaa-aaataataaagagtgataaatttaactttttaaaaattacaatattgttgaatcca 18800246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 3863154 - 3863039
Alignment:
Q  28 cttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatc 127  Q
    ||||| ||||||||||||| || |||||||  |||||||||| | ||||| || || | | |||||||||||||||| ||| | |||| ||| |||||||    
T  3863154 cttagtgcattggttaaaaagacaaaaataaaaatattgtatcgggaaatgatgaaaaatagtgaatttaacttttttaaagttaaaaaattgttgaatc 3863055  T
Q  128 caatgtaaatatacta 143  Q
    ||||| |||| |||||    
T  3863054 caatgcaaatctacta 3863039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 32204270 - 32204179
Alignment:
Q  52 aaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    ||||||| ||||||| ||||| |||| || || |||| ||||||||||||||||||| | |||||||| |||||| ||||| |||| |||||    
T  32204270 aaaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaatttacta 32204179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 41084920 - 41084813
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||||| ||||||||||| ||||||||| |||  ||  || |||||||||||||||||| || | || |  |||||||||||||||| | |||| |    
T  41084920 aaagagtgcttttagggcattgattaaaaggacaaatttaaaaaaattgtattgagaaataatgaaaattgatagatttaactttttaaaagttaaaaaa 41084821  T
Q  118 ttattgaa 125  Q
    ||||||||    
T  41084820 ttattgaa 41084813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 10575820 - 10575875
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||| || ||||||| |||||| ||||| ||||||||||||||    
T  10575820 aatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttt 10575875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16931939 - 16931888
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||    
T  16931939 aatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatacta 16931888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 16937322 - 16937271
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatacta 143  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||    
T  16937322 aatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatacta 16937271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 27053490 - 27053609
Alignment:
Q  28 cttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatc 127  Q
    ||||||||||||| |||| |||||||||||| ||||| | ||    ||||  | || |||| | ||||||||||||||||| |||||||||| ||||| |    
T  27053490 cttagggcattggataaagggataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaac 27053589  T
Q  128 caatgtaaatatactacttt 147  Q
    ||||| ||| || |||||||    
T  27053590 caatgcaaacattctacttt 27053609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 30388721 - 30388776
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||    
T  30388721 aatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttt 30388776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 42222337 - 42222230
Alignment:
Q  24 tgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattg 123  Q
    |||||||||| |||| | |||  |||||||||||| ||||| ||||||  ||||  | || |||| | ||||||||||||||||| |||||||||| |||    
T  42222337 tgctcttaggacattagataaggggataaaaatagaaatatggtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttg 42222238  T
Q  124 aatccaat 131  Q
    || |||||    
T  42222237 aaaccaat 42222230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 49069663 - 49069564
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| ||| | ||||||||||| ||||| ||||||| ||||  | || |||| | ||| |||||||||||||||||| ||||| ||||| |||||    
T  49069663 gggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaaaccaat 49069564  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 35003726 - 35003609
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    ||||||||||||| ||||||| ||| | |||| |||||||| |||||| |||||| ||||  | || |||| | ||||||||||||||||||| |||| |    
T  35003726 aaagagtgctcttggggcattagtttagaggacaaaaatagaaatattatattga-aaatggtgaaaagtgattaatttaactttttaaaaattaaaaaa 35003628  T
Q  118 ttattgaatccaatgtaaa 136  Q
     | |||||| ||| |||||    
T  35003627 gtgttgaattcaaagtaaa 35003609  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 16957711 - 16957658
Alignment:
Q  94 tttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||| |||||||||| ||||||  |||||||||||| ||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttt 16957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 34835913 - 34835852
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactttcaatt 152  Q
    |||||||||||||||||| | |||||||| || ||| |||| ||||||||||||||| ||||    
T  34835913 gaatttaactttttaaaagttaaaatattgttaaattcaatataaatatactacttttaatt 34835852  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 44478495 - 44478446
Alignment:
Q  28 cttagggcattggttaaaaggataaaaatagtaatattgtattgagaaat 77  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||| ||||    
T  44478495 cttagtgcattggttaagaggatataaatagtaatattgtattgaaaaat 44478446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 8380534 - 8380434
Alignment:
Q  47 ggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactactt 146  Q
    |||||||||||  ||||| | ||||  |||| || || |||| | ||||||||||||||||| ||||||| || ||||| |||||| ||| |||||||||    
T  8380534 ggataaaaataaaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgaaaacatactactt 8380435  T
Q  147 t 147  Q
    |    
T  8380434 t 8380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 31360279 - 31360363
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaacttt 102  Q
    ||||||||| ||||||| ||| ||| | | ||||||||||| |||||||||||| |||||  |||| |||| | |||||||||||    
T  31360279 aaagagtgcccttagggtattagtttagaagataaaaatagaaatattgtattgggaaatggtaaaaagtgataaatttaacttt 31360363  T

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Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 41769635 - 41769759
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaacttt-ttaaaaatcaaaat 116  Q
    ||||||||| ||| | ||||||||||| | ||||||||||| || ||| |||| | ||||  | || ||||| |||||||| ||| |||||| ||||||     
T  41769635 aaagagtgcccttggagcattggttaagatgataaaaatagaaacattatattaaaaaatggtgaaaagtggagaatttaattttattaaaagtcaaaac 41769734  T
Q  117 attattgaatccaatgtaaatatac 141  Q
    ||| |||||| |||||| |||||||    
T  41769735 attgttgaattcaatgttaatatac 41769759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 40763357 - 40763242
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||| |||  |||||||||||| |||||   ||||| ||||  | || |||| | ||||||||||||||||| | ||||| || ||||| |||||    
T  40763357 gggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaat 40763258  T
Q  132 gtaaatatactacttt 147  Q
    | |||||| |||||||    
T  40763257 gcaaatatgctacttt 40763242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 36279233 - 36279143
Alignment:
Q  26 ctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaat 116  Q
    ||||| ||||||||| ||| ||||||||||||  ||||| | ||||  ||||  | || |||| | |||||||||||||||||||||||||    
T  36279233 ctcttggggcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat 36279143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 6548580 - 6548523
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||||| | |||||||| ||| |||||||| |||  |||||||||    
T  6548580 tgaatttaactttttaaaagttaaaatattgttggatccaatgcaaacttactacttt 6548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9887269 - 9887216
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattg 71  Q
    ||||||| | |||||| |||||||||| ||||||||||||| ||||||| ||||    
T  9887269 aaagagtacccttaggacattggttaagaggataaaaatagaaatattgcattg 9887216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 14718177 - 14718218
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||||||||||||||| | ||||||||||||||| ||||    
T  14718177 tgaatttaactttttaaaagttaaaatattattgaattcaat 14718218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 35404313 - 35404370
Alignment:
Q  90 tgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||||||||||| | |||||||  ||||||| ||||||||  |||||||||    
T  35404313 tgaatttaactttttaaaagttaaaatatcgttgaatctaatgtaaacctactacttt 35404370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 31626102 - 31626142
Alignment:
Q  92 aatttaactttttaaaaatcaaaatattattgaatccaatg 132  Q
    ||||||||||||||||||||||||| || ||||| ||||||    
T  31626102 aatttaactttttaaaaatcaaaatgttgttgaaaccaatg 31626142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 35239788 - 35239888
Alignment:
Q  32 gggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaat 131  Q
    ||||||| | ||| ||||||||| ||  ||||| || |||| |||| |||||  ||| ||||||||||||||||||| | |||||  |||||||| ||||    
T  35239788 gggcatttgataagaggataaaagtaaaaatatggtgttgaaaaatgataaaacgtgatgaatttaactttttaaaagttaaaatgctattgaattcaat 35239887  T
Q  132 g 132  Q
    |    
T  35239888 g 35239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 40774246 - 40774330
Alignment:
Q  35 cattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatatt 119  Q
    ||||| |||| | |||| |||||| ||||||| ||||| |||| || || | || ||||||||||||||||||| | ||||||||    
T  40774246 cattgattaagaagatacaaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatatt 40774330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 48879719 - 48879663
Alignment:
Q  91 gaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    |||||||| ||||||||| | |||||||| ||||||  ||||||||||| |||||||    
T  48879719 gaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttt 48879663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 37376 - 37480
Alignment:
Q  18 aaagagtgctcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaata 117  Q
    |||||||| ||||||| |||||| ||| ||||| ||||||| ||||||||||||| |||          || |||||||||||||| |||| |||||||     
T  37376 aaagagtgttcttaggacattggataagaggattaaaatagaaatattgtattgaaaaa----------tgatgaatttaacttttcaaaagtcaaaatg 37465  T
Q  118 ttattgaatccaatg 132  Q
    |||||||||||||||    
T  37466 ttattgaatccaatg 37480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 34; Significance: 0.0000000005; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 16771 - 16887
Alignment:
Q  30 tagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcca 129  Q
    ||||||||||| |||  |||||||||||| ||||| | ||||| ||||| | || | || | ||| ||||||||||||| |||||||||| ||||| |||    
T  16771 tagggcattggataaggggataaaaatagaaatatagcattga-aaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaacca 16869  T
Q  130 atgtaaatatactacttt 147  Q
    ||| ||| || |||||||    
T  16870 atgcaaacatgctacttt 16887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 26939 - 27055
Alignment:
Q  30 tagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcca 129  Q
    ||||||||||| |||  |||||||||||| ||||| | ||||| ||||| | || | || | ||| ||||||||||||| |||||||||| ||||| |||    
T  26939 tagggcattggataaggggataaaaatagaaatatagcattga-aaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaacca 27037  T
Q  130 atgtaaatatactacttt 147  Q
    ||| ||| || |||||||    
T  27038 atgcaaacatgctacttt 27055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 37105 - 37221
Alignment:
Q  30 tagggcattggttaaaaggataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatcca 129  Q
    ||||||||||| |||  |||||||||||| ||||| | ||||| ||||| | || | || | ||| ||||||||||||| |||||||||| ||||| |||    
T  37105 tagggcattggataaggggataaaaatagaaatatagcattga-aaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaacca 37203  T
Q  130 atgtaaatatactacttt 147  Q
    ||| ||| || |||||||    
T  37204 atgcaaacatgctacttt 37221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 39679 - 39582
Alignment:
Q  48 gataaaaatagtaatattgtattgagaaataataaagagtggtgaatttaactttttaaaaatcaaaatattattgaatccaatgtaaatatactacttt 147  Q
    ||||||||||| || |||||||||  ||||| | || | ||  |||||||||||||||||| |||| ||  | |||||| ||||||||||||||||||||    
T  39679 gataaaaatagaaacattgtattggaaaatagtgaaaactgaagaatttaactttttaaaagtcaacat--tgttgaattcaatgtaaatatactacttt 39582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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