View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17796_low_31 (Length: 281)
Name: NF17796_low_31
Description: NF17796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17796_low_31 |
 | |
|
| [»] scaffold0201 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 23499758 - 23499484
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23499758 |
aaaacatcctaaaactggatatgaagatgtatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
23499659 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |
|
|
| T |
23499658 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtgttaaaatttagttatgctgacttag |
23499559 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgagtggacagggtaaagattttcttcgagatc |
275 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
23499558 |
atcgttgtcaaaaggccatatttctagacatcgcatgcttgttgagtggacagggtaaagattttgttagagatc |
23499484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 23447990 - 23447741
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23447990 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
23447891 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||| |
|
|
| T |
23447890 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcgaaagatttatgatgtgttaaaattgagttatgatgatttag |
23447791 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgagtgga |
250 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23447790 |
atcattgtcagaaggccatatttctagacatcgcatgcttgttgaatgga |
23447741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 23479279 - 23479015
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23479279 |
aaaacaacctaaaattggatatgaagatctatcagaaagtgtaattgcctattgcaaaggtaaccctctggcattaaaagttttaggtgcaaatctcagt |
23479180 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
|||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||||| |||| |
|
|
| T |
23479179 |
tcaaggggccaagaagcgtgggaaaatgaattgaaaaagctccaaaagattcccaatcgaaaaattcataatgtgttaaaattgagttatgatgagttag |
23479080 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgagtggacagggtaaagatttt |
265 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23479079 |
atcgttgtcaaaaggccatatttctagacatcgcatgcttgttgagtggacagggtaaagatttt |
23479015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23454755 - 23454510
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
23454755 |
aaaacatcctaaaattggatatgaagatctatcagagagtgtaattgcctattgcaaaggcaatcctctggctttaaaagttttaggtgctaatctgagt |
23454656 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| ||| ||| | ||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
23454655 |
tcaagaggcaaagatgaatgggaaaatgaattgaaaaagctccaaaagattcccaatacgaaaatttacaatgtattaaaattgagttatgatgacttag |
23454556 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
23454555 |
attgttgtcaaaaggccatatttctagacaacgcatgcttgctgag |
23454510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23469221 - 23468976
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
23469221 |
aaaacatcctaaaattggatatgaagatctatcagagagtgtaattgcctattgcaaaggcaatcctctggctataaaagttttaggtgcaaatccgagt |
23469122 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| || ||||||||||| |||||| |||||| ||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
23469121 |
tcaagaagcaaggaagcatgggacaatgaattgaaaatgctccaaaagattcccaataggaaaatttttaatgtgttaaaattgagttatgatgacttag |
23469022 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23469021 |
attgttgtcaaaaggccatatttctagatatcgcatgcttgttgag |
23468976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23473140 - 23472895
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||| | |
|
|
| T |
23473140 |
aaaacagcctaaaattggatatgaagatctatcagaaagtgtaattgcctattgcaaaggcaatcctctggctttaaaagttttaggggtaaatctccgc |
23473041 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| ||| ||| ||||||||||||||| ||||||||||| |||||||||| ||| || ||||||| || |||||||| |||||||||||||||| |
|
|
| T |
23473040 |
tcaagaggcaaagaggcatgggaaaatgaattgaaaaagctcgaaaagattccaaataggaaaatttatatcgtgttaaaattcagttatgatgacttag |
23472941 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|| || |||| ||||||||||| |||| || |||||||| ||||| |
|
|
| T |
23472940 |
atttttttcaacaggccatatttttagatattgcatgctttttgag |
23472895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 23352633 - 23352398
Alignment:
| Q |
5 |
catcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagttcaa |
104 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| ||||||||||||||||| |||| || || ||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
23352633 |
catcctaatattggatatgaagatctatcagaacgtgtaattgcctattgccaaggcaatccgctggctttaaaagttttaggtgctaatctgagttcaa |
23352534 |
T |
|
| Q |
105 |
ggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttagatca |
204 |
Q |
| |
|
| || | ||| |||| |||||||| |||||||||| ||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
23352533 |
gagggaaaaaagaatggaaaaatgaattgaaaaagctacaaaagattcccaataggaaaatttacaatgtgttaaaattgagttatgatgacttagattg |
23352434 |
T |
|
| Q |
205 |
ttgtcaaaaggccatatttctagacatcgcatgctt |
240 |
Q |
| |
|
|| ||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23352433 |
ttctcaaaaggccatatttctagatatcacatgctt |
23352398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 23440603 - 23440366
Alignment:
| Q |
9 |
ctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagttcaagggg |
108 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||| | ||||| || |
|
|
| T |
23440603 |
ctaaaattggatgtgaagatctatcagaaagtgtaattgcctattgcaaaggcaatcctctggctttaaaagttttaggggaaaatctccgctcaagagg |
23440504 |
T |
|
| Q |
109 |
ccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttagatcattgt |
208 |
Q |
| |
|
| ||| ||||||||||||||| ||||||||||| |||||||||| ||| || ||||||| || |||||||| |||||||||||||||||| || | |
|
|
| T |
23440503 |
caaagaggcatgggaaaatgaattgaaaaagctcgaaaagattccaaataggaaaatttataccgtgttaaaattcagttatgatgacttagattttttt |
23440404 |
T |
|
| Q |
209 |
caaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|||||||||||||| |||| || |||||||| ||||| |
|
|
| T |
23440403 |
taaaaggccatatttttagatattgcatgctttttgag |
23440366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23463977 - 23463732
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| || ||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
23463977 |
aaaacagcctaaaattggatatgaagatctatcggaaagtgtaattgcctattgcagaggcaaccctttggctttaaaagttttaggtaaaaatctccgt |
23463878 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| ||| | ||| ||||||| ||||| ||||||||||| ||| |||||| ||| | ||| | ||| | |||||||||||||||||| |||||| |
|
|
| T |
23463877 |
tcaagaggcaaaaaagtatgggaagatgaattgaaaaagctcgaaaggattccaaatggggaaattaacaatatgttaaaattgagttatgataacttag |
23463778 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|| || |||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
23463777 |
atatttttcaaaaggacatatttctagatatcgcatgcttgttgag |
23463732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23386972 - 23386727
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
23386972 |
aaaacagcctaaaattggatatgaagatatatcagaaagtgtaattgcctattgcagaggcaaccctttggctttaaaagttttaggtaaaaatctccgt |
23386873 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| ||| | ||| ||||||| ||||| |||||||||| ||| |||||| ||| | ||| | ||| | |||||||||||||||||| |||||| |
|
|
| T |
23386872 |
tcaagaggcaaaaaagtatgggaagatgaattgaaaaagcttgaaatgattccaaatggggaaattaacaatatgttaaaattgagttatgataacttag |
23386773 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|| || |||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
23386772 |
atatttttcaaaaggacatatttctagatatcgcatgcttgttgag |
23386727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23405346 - 23405101
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| || ||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||| || |
|
|
| T |
23405346 |
aaaacagcctaaaattggatatgaagatctatctgaaagtgtaattgcctattgcagaggcaaccctttggctttaaaagttttaggtaaaaatctccgt |
23405247 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| ||| | || ||||||| ||||| ||||||||||| |||||||||| ||| | ||| | ||| | |||||||||||||||||| |||||| |
|
|
| T |
23405246 |
tcaagaggcaaaatagtatgggaagatgaattgaaaaagctcgaaaagattccaaatggggaaattaacaatatgttaaaattgagttatgataacttag |
23405147 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgcttgttgag |
246 |
Q |
| |
|
|| || |||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
23405146 |
atatttttcaaaaggacatatttctagatattgcatgcttgttgag |
23405101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 23401762 - 23401616
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||| ||||||||||||||| ||||| ||| |
|
|
| T |
23401762 |
aaaacatcctaaaactggatatgaagatctatcagaaagtgtaattgcctattgcaaaggcaatcatctggctataaaagttttaggtgaaaatccgagt |
23401663 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaa |
147 |
Q |
| |
|
|||||| || |||||||| |||||||| |||||||||||||||| |
|
|
| T |
23401662 |
tcaaggagctaggaagcatgcaaaaatgaattgaaaaagctccaaaa |
23401616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 23398635 - 23398480
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||| | ||| ||||||||||||| ||| | ||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
23398635 |
aaaacatcctaaaattggatataaagatctatcacaaagtctaattgcctattgtaaatgaaaccctctggctttaaaagttttagctgcaaatccaagt |
23398536 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaa |
156 |
Q |
| |
|
||||||||| |||| |||||||||| ||| || ||||||||||||| |||||||| |
|
|
| T |
23398535 |
tcaaggggcaaagaaacatgggaaaaagaattggaaaagctccaaaatattcccaa |
23398480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 35768780 - 35768977
Alignment:
| Q |
5 |
catcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagttcaa |
104 |
Q |
| |
|
|||||||||| |||||||||||| || ||||| ||||| ||||||||||||||||| || ||| |||||||||||||||| |||||| ||| |||||| |
|
|
| T |
35768780 |
catcctaaaagtggatatgaagagctctcagaaagtgttattgcctattgcaaaggcaatcctttggctttaaaagttttgggtgcacgtcttcgttcaa |
35768879 |
T |
|
| Q |
105 |
ggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttagat |
202 |
Q |
| |
|
| | |||||||||| |||||||| || |||| ||||| |||||||| | || ||| | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
35768880 |
gaagtaaagaagcatggaaaaatgaattggaaaaactccagaagattccagaaatgaaaattcagaatgtgttaaaattgagttatgatgacttagat |
35768977 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 36003191 - 36002994
Alignment:
| Q |
43 |
aattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagttcaaggggccgagaagcatgggaaaatgaactgaaaaagctc |
142 |
Q |
| |
|
||||| ||||||| ||| || || ||||||||||||||||||||||||||| || || ||| || |||||||||||||| |||| || |||||||| |
|
|
| T |
36003191 |
aattggctattgcggaggcaatcccctggctttaaaagttttaggtgcaaatttccgtacaaaaagcaaagaagcatgggaaagtgaattggaaaagctc |
36003092 |
T |
|
| Q |
143 |
caaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttagatcattgtcaaaaggccatatttctagacatcgcatgctt |
240 |
Q |
| |
|
|||||||||| ||| | ||| || |||| |||||||||||| ||||||||||||| | |||| ||| |||||| ||||||| |||||||| |
|
|
| T |
36003091 |
aaaaagattcctaatgggagaattcatgatgtgctaaaattgagtttcgatgacttagatcgtactcaacaggagatatttttagacattgcatgctt |
36002994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0201 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0201
Description:
Target: scaffold0201; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 12141 - 11902
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaatctcagt |
100 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| || ||||| |||||||||||| |||| ||||||||| || |
|
|
| T |
12141 |
aaaacagcctaaaattggatatgaagatctatcagaaagtgtaatttcctattgcaaaggcaatcctctagctttaaaagttataggggcaaatctccgt |
12042 |
T |
|
| Q |
101 |
tcaaggggccgagaagcatgggaaaatgaactgaaaaagctccaaaagattcccaatcaaaagatttataatgtattaaaattgagttatgatgacttag |
200 |
Q |
| |
|
||||| ||| ||| ||||||||||||||| ||||||||||| |||||||||| ||| | ||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
12041 |
tcaagaggcaaagaggcatgggaaaatgaattgaaaaagctcaaaaagattccaaatggggaaatttacaatgtgttaaaattgagttatgatgacttag |
11942 |
T |
|
| Q |
201 |
atcattgtcaaaaggccatatttctagacatcgcatgctt |
240 |
Q |
| |
|
|| | | |||||||||||||||| || ||||||||||| |
|
|
| T |
11941 |
attttactgaaaaggccatatttctggatatcgcatgctt |
11902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12896274 - 12896367
Alignment:
| Q |
1 |
aaaacatcctaaaactggatatgaagatctatcagatagtgtaattgcctattgcaaaggtaaccctctggctttaaaagttttaggtgcaaat |
94 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||| | |||| ||||| |||||| | ||| || || |||||||| |||||||||||||||||| |
|
|
| T |
12896274 |
aaaacatcctaaagatggatatgaggatctatcaaagagtgcaattggctattgtagaggcaatcccctggctttgaaagttttaggtgcaaat |
12896367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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