View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17797_high_1 (Length: 716)

Name: NF17797_high_1
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17797_high_1
NF17797_high_1
[»] chr8 (33 HSPs)
chr8 (19-692)||(2775840-2776513)
chr8 (610-690)||(9695631-9695711)
chr8 (601-689)||(7046335-7046423)
chr8 (613-688)||(12491343-12491418)
chr8 (613-692)||(36545147-36545226)
chr8 (613-692)||(36565446-36565525)
chr8 (613-692)||(18125171-18125250)
chr8 (621-687)||(18474173-18474239)
chr8 (601-689)||(79041-79132)
chr8 (602-675)||(30748472-30748545)
chr8 (512-588)||(10079978-10080054)
chr8 (613-692)||(36395154-36395234)
chr8 (614-690)||(45419237-45419313)
chr8 (613-692)||(39946855-39946934)
chr8 (613-692)||(40813322-40813401)
chr8 (554-651)||(17491767-17491864)
chr8 (601-690)||(29700276-29700365)
chr8 (613-692)||(11523928-11524008)
chr8 (516-588)||(38178335-38178407)
chr8 (625-692)||(2796555-2796622)
chr8 (635-690)||(33666726-33666781)
chr8 (613-692)||(42854209-42854288)
chr8 (620-690)||(32043590-32043660)
chr8 (632-690)||(41444550-41444608)
chr8 (612-681)||(38689547-38689616)
chr8 (521-593)||(39967579-39967651)
chr8 (617-692)||(8879649-8879724)
chr8 (520-599)||(35643685-35643764)
chr8 (644-686)||(7103274-7103316)
chr8 (621-675)||(35643814-35643868)
chr8 (523-588)||(4011218-4011283)
chr8 (621-690)||(25985519-25985587)
chr8 (601-666)||(30559717-30559782)
[»] chr7 (68 HSPs)
chr7 (612-690)||(19262637-19262715)
chr7 (613-692)||(13859213-13859292)
chr7 (613-692)||(49029274-49029353)
chr7 (601-687)||(12966025-12966111)
chr7 (622-690)||(28020964-28021032)
chr7 (616-692)||(34869418-34869494)
chr7 (613-692)||(2885927-2886006)
chr7 (613-688)||(12841480-12841555)
chr7 (613-692)||(31005221-31005300)
chr7 (613-692)||(33072950-33073029)
chr7 (613-688)||(35906406-35906481)
chr7 (613-692)||(38607002-38607081)
chr7 (613-692)||(43281672-43281751)
chr7 (613-692)||(45836685-45836764)
chr7 (604-690)||(36514403-36514489)
chr7 (613-692)||(37617942-37618022)
chr7 (613-692)||(6374866-6374945)
chr7 (621-684)||(7220750-7220813)
chr7 (613-692)||(11593958-11594037)
chr7 (613-692)||(33350011-33350090)
chr7 (602-689)||(40830224-40830311)
chr7 (613-692)||(44855377-44855456)
chr7 (613-692)||(46356061-46356140)
chr7 (601-687)||(28628126-28628212)
chr7 (613-691)||(36869449-36869527)
chr7 (612-690)||(40169649-40169727)
chr7 (625-690)||(38920794-38920859)
chr7 (601-690)||(39811957-39812046)
chr7 (601-690)||(42187470-42187559)
chr7 (621-690)||(47848674-47848743)
chr7 (622-690)||(27021906-27021974)
chr7 (613-689)||(31682807-31682883)
chr7 (613-689)||(39906575-39906651)
chr7 (616-687)||(22349623-22349694)
chr7 (613-692)||(29650382-29650461)
chr7 (624-690)||(7189442-7189508)
chr7 (632-690)||(30914692-30914750)
chr7 (613-690)||(43491308-43491385)
chr7 (605-690)||(45558362-45558447)
chr7 (601-665)||(6420683-6420747)
chr7 (620-680)||(25826682-25826742)
chr7 (602-690)||(28858044-28858132)
chr7 (617-660)||(24549902-24549945)
chr7 (623-690)||(30632968-30633035)
chr7 (613-683)||(7273046-7273116)
chr7 (624-690)||(36136764-36136830)
chr7 (620-674)||(41948532-41948586)
chr7 (605-690)||(5335920-5336005)
chr7 (610-683)||(14593772-14593845)
chr7 (612-689)||(18605350-18605427)
chr7 (612-689)||(18637563-18637640)
chr7 (612-689)||(18650997-18651074)
chr7 (621-690)||(43282408-43282477)
chr7 (601-666)||(48202895-48202960)
chr7 (520-588)||(12966151-12966219)
chr7 (604-672)||(30144793-30144861)
chr7 (620-688)||(36101977-36102045)
chr7 (627-683)||(40008636-40008692)
chr7 (605-649)||(43791638-43791682)
chr7 (601-672)||(38135405-38135476)
chr7 (529-588)||(45601611-45601670)
chr7 (613-692)||(46014386-46014464)
chr7 (529-599)||(1569140-1569210)
chr7 (613-675)||(36652007-36652069)
chr7 (632-690)||(46989903-46989961)
chr7 (620-690)||(48736111-48736181)
chr7 (610-687)||(25579279-25579356)
chr7 (621-666)||(35713719-35713764)
[»] chr5 (38 HSPs)
chr5 (617-690)||(31636129-31636202)
chr5 (613-692)||(4496382-4496461)
chr5 (613-692)||(24178508-24178587)
chr5 (620-690)||(33667216-33667286)
chr5 (613-692)||(1287784-1287863)
chr5 (612-690)||(18351111-18351190)
chr5 (613-692)||(38684965-38685044)
chr5 (613-691)||(16347583-16347661)
chr5 (616-692)||(28977067-28977143)
chr5 (612-691)||(15168791-15168870)
chr5 (616-690)||(1275264-1275338)
chr5 (601-675)||(42199301-42199375)
chr5 (610-690)||(2712944-2713024)
chr5 (613-689)||(3301845-3301921)
chr5 (601-653)||(11675547-11675599)
chr5 (613-692)||(12492589-12492671)
chr5 (622-690)||(15489706-15489774)
chr5 (620-692)||(34273025-34273097)
chr5 (613-692)||(2075679-2075758)
chr5 (603-690)||(10082934-10083021)
chr5 (613-692)||(14665712-14665791)
chr5 (617-683)||(1525651-1525717)
chr5 (613-687)||(20456776-20456850)
chr5 (613-687)||(43475243-43475317)
chr5 (601-667)||(4026528-4026594)
chr5 (601-687)||(14749310-14749396)
chr5 (601-683)||(21952364-21952446)
chr5 (621-683)||(36123405-36123466)
chr5 (632-689)||(11002647-11002704)
chr5 (620-689)||(28676596-28676665)
chr5 (515-588)||(42199528-42199601)
chr5 (601-690)||(418178-418269)
chr5 (622-686)||(37065533-37065597)
chr5 (621-689)||(43558040-43558108)
chr5 (621-688)||(17213079-17213146)
chr5 (520-598)||(14749432-14749510)
chr5 (601-650)||(79553-79602)
chr5 (637-690)||(14667763-14667816)
[»] chr1 (58 HSPs)
chr1 (606-687)||(38868885-38868966)
chr1 (613-692)||(1210743-1210822)
chr1 (613-692)||(34792554-34792633)
chr1 (613-689)||(51602057-51602133)
chr1 (613-692)||(8671916-8671995)
chr1 (613-692)||(15085932-15086011)
chr1 (613-692)||(22090094-22090173)
chr1 (613-692)||(30202335-30202414)
chr1 (601-687)||(5338727-5338813)
chr1 (601-690)||(52073655-52073745)
chr1 (602-690)||(43423719-43423807)
chr1 (613-692)||(696267-696346)
chr1 (613-692)||(4001660-4001739)
chr1 (613-692)||(9592732-9592811)
chr1 (603-690)||(48431601-48431688)
chr1 (613-692)||(51440970-51441049)
chr1 (620-690)||(9509318-9509388)
chr1 (601-687)||(40416374-40416460)
chr1 (601-690)||(2544599-2544688)
chr1 (620-676)||(16822234-16822290)
chr1 (604-688)||(27848001-27848085)
chr1 (601-689)||(32404719-32404807)
chr1 (604-659)||(10569263-10569318)
chr1 (613-692)||(32082950-32083029)
chr1 (621-692)||(32231167-32231238)
chr1 (620-687)||(39140523-39140590)
chr1 (601-687)||(14226022-14226108)
chr1 (603-688)||(3819051-3819136)
chr1 (601-674)||(46388392-46388465)
chr1 (613-690)||(49347598-49347675)
chr1 (610-690)||(1661430-1661510)
chr1 (601-693)||(13827763-13827855)
chr1 (613-692)||(4029120-4029199)
chr1 (613-692)||(8391770-8391849)
chr1 (611-690)||(13827920-13827999)
chr1 (613-692)||(38807876-38807955)
chr1 (613-692)||(43240584-43240663)
chr1 (620-690)||(8343070-8343140)
chr1 (613-663)||(25979436-25979486)
chr1 (601-687)||(35828743-35828829)
chr1 (624-690)||(37263331-37263397)
chr1 (512-573)||(15577568-15577629)
chr1 (601-690)||(17275196-17275285)
chr1 (512-588)||(8342952-8343028)
chr1 (622-662)||(44008616-44008656)
chr1 (621-688)||(27637846-27637913)
chr1 (611-689)||(10272260-10272338)
chr1 (517-579)||(12231509-12231571)
chr1 (636-690)||(37463101-37463155)
chr1 (612-686)||(38877547-38877621)
chr1 (624-690)||(51812525-51812591)
chr1 (640-690)||(52561843-52561893)
chr1 (634-683)||(9599620-9599669)
chr1 (621-690)||(23791857-23791926)
chr1 (621-690)||(40419639-40419708)
chr1 (625-690)||(43954199-43954264)
chr1 (516-585)||(46388514-46388583)
chr1 (516-585)||(46394958-46395027)
[»] scaffold0018 (2 HSPs)
scaffold0018 (613-692)||(31466-31545)
scaffold0018 (601-690)||(44061-44150)
[»] chr4 (67 HSPs)
chr4 (613-692)||(31960019-31960098)
chr4 (613-692)||(43433922-43434001)
chr4 (613-692)||(52569720-52569799)
chr4 (605-689)||(35555844-35555928)
chr4 (613-692)||(33227207-33227286)
chr4 (613-688)||(53707796-53707871)
chr4 (604-690)||(40018379-40018465)
chr4 (612-690)||(49738808-49738886)
chr4 (616-692)||(48622751-48622827)
chr4 (613-692)||(436227-436306)
chr4 (613-692)||(4440851-4440930)
chr4 (613-692)||(27450384-27450463)
chr4 (613-692)||(33191053-33191132)
chr4 (613-692)||(48174298-48174377)
chr4 (601-683)||(1380374-1380456)
chr4 (622-688)||(31459032-31459098)
chr4 (612-689)||(38903924-38904001)
chr4 (605-690)||(41192836-41192921)
chr4 (621-690)||(51252674-51252743)
chr4 (621-690)||(54470207-54470276)
chr4 (613-690)||(56375290-56375367)
chr4 (610-690)||(44047550-44047630)
chr4 (621-685)||(46715585-46715649)
chr4 (621-692)||(28236181-28236252)
chr4 (603-690)||(33709924-33710011)
chr4 (605-680)||(42285897-42285972)
chr4 (605-686)||(29398822-29398903)
chr4 (620-681)||(45094372-45094433)
chr4 (611-687)||(42293452-42293528)
chr4 (621-689)||(42639233-42639301)
chr4 (613-692)||(20192031-20192110)
chr4 (621-692)||(23906508-23906579)
chr4 (613-688)||(37797854-37797929)
chr4 (516-599)||(38903793-38903875)
chr4 (601-683)||(50662394-50662477)
chr4 (620-690)||(17900480-17900550)
chr4 (605-690)||(31897625-31897708)
chr4 (616-690)||(37773659-37773733)
chr4 (620-690)||(50471526-50471596)
chr4 (601-674)||(21879346-21879419)
chr4 (601-690)||(28497490-28497578)
chr4 (601-690)||(31339537-31339625)
chr4 (621-690)||(38570960-38571029)
chr4 (621-690)||(44360087-44360155)
chr4 (621-690)||(46372024-46372093)
chr4 (613-682)||(50286970-50287039)
chr4 (613-665)||(8286456-8286508)
chr4 (538-598)||(37488216-37488276)
chr4 (516-588)||(40018264-40018336)
chr4 (611-667)||(40268466-40268522)
chr4 (621-692)||(20591513-20591584)
chr4 (621-660)||(30853387-30853426)
chr4 (613-692)||(39100740-39100819)
chr4 (620-675)||(47611742-47611797)
chr4 (620-690)||(934648-934717)
chr4 (621-691)||(1793459-1793529)
chr4 (624-690)||(2588991-2589056)
chr4 (620-690)||(10209034-10209104)
chr4 (530-588)||(10209171-10209229)
chr4 (621-663)||(21214793-21214835)
chr4 (621-683)||(26356626-26356688)
chr4 (517-599)||(45569085-45569167)
chr4 (601-674)||(29182498-29182571)
chr4 (612-653)||(45176043-45176084)
chr4 (615-692)||(47265409-47265486)
chr4 (529-598)||(50680865-50680934)
chr4 (613-690)||(51421730-51421807)
[»] chr3 (54 HSPs)
chr3 (620-690)||(50960845-50960915)
chr3 (613-690)||(54128378-54128455)
chr3 (620-688)||(49503766-49503834)
chr3 (613-692)||(52138798-52138877)
chr3 (613-692)||(22071-22149)
chr3 (613-692)||(28245435-28245514)
chr3 (613-692)||(35033144-35033223)
chr3 (613-688)||(47233801-47233876)
chr3 (612-690)||(3987047-3987125)
chr3 (601-690)||(21200550-21200637)
chr3 (603-689)||(41842706-41842792)
chr3 (613-691)||(43694970-43695048)
chr3 (613-674)||(39235154-39235215)
chr3 (610-683)||(39535642-39535715)
chr3 (613-690)||(54279020-54279097)
chr3 (613-693)||(19736994-19737074)
chr3 (613-693)||(19757897-19757977)
chr3 (613-689)||(51447915-51447991)
chr3 (613-692)||(5168830-5168909)
chr3 (613-692)||(38060429-38060508)
chr3 (604-690)||(19676276-19676362)
chr3 (601-683)||(29374941-29375023)
chr3 (622-679)||(31261155-31261212)
chr3 (601-690)||(36820154-36820243)
chr3 (632-688)||(26490317-26490373)
chr3 (620-688)||(38430850-38430918)
chr3 (622-690)||(48734349-48734417)
chr3 (613-692)||(25191375-25191454)
chr3 (517-588)||(40982031-40982102)
chr3 (602-687)||(659528-659613)
chr3 (621-674)||(11581460-11581513)
chr3 (515-588)||(21200683-21200756)
chr3 (621-690)||(27917570-27917639)
chr3 (536-588)||(2340812-2340864)
chr3 (633-689)||(31337751-31337807)
chr3 (622-686)||(31454441-31454504)
chr3 (610-690)||(39600883-39600963)
chr3 (516-588)||(43308697-43308769)
chr3 (516-584)||(46431754-46431822)
chr3 (601-660)||(46431868-46431925)
chr3 (613-653)||(48508272-48508312)
chr3 (602-690)||(45289285-45289375)
chr3 (603-689)||(31208979-31209065)
chr3 (621-690)||(31453151-31453221)
chr3 (621-675)||(33272235-33272289)
chr3 (601-675)||(36303994-36304067)
chr3 (601-683)||(44443397-44443479)
chr3 (621-687)||(49841622-49841688)
chr3 (601-690)||(50249384-50249476)
chr3 (601-690)||(34719265-34719354)
chr3 (634-687)||(36868450-36868503)
chr3 (622-687)||(38850123-38850188)
chr3 (612-673)||(40981914-40981975)
chr3 (516-585)||(44443279-44443348)
[»] chr6 (19 HSPs)
chr6 (611-692)||(5258351-5258432)
chr6 (620-690)||(33084058-33084128)
chr6 (602-690)||(9593900-9593988)
chr6 (634-690)||(21870299-21870355)
chr6 (616-692)||(28085374-28085450)
chr6 (613-692)||(5631820-5631899)
chr6 (613-692)||(32755919-32755998)
chr6 (612-682)||(24665818-24665888)
chr6 (613-692)||(20427841-20427920)
chr6 (613-692)||(30031254-30031333)
chr6 (520-599)||(33997623-33997702)
chr6 (601-666)||(7150514-7150579)
chr6 (613-689)||(608158-608234)
chr6 (632-692)||(12890582-12890642)
chr6 (520-599)||(34584-34663)
chr6 (516-599)||(1747716-1747799)
chr6 (636-683)||(4948539-4948586)
chr6 (636-683)||(4955510-4955557)
chr6 (613-675)||(30679421-30679483)
[»] chr2 (41 HSPs)
chr2 (601-690)||(12141544-12141633)
chr2 (612-688)||(11017316-11017392)
chr2 (613-692)||(38452890-38452969)
chr2 (601-674)||(13240938-13241011)
chr2 (613-692)||(2610586-2610665)
chr2 (613-692)||(3866070-3866149)
chr2 (620-692)||(8180778-8180850)
chr2 (512-588)||(19235055-19235131)
chr2 (620-692)||(25834679-25834751)
chr2 (620-692)||(43238305-43238377)
chr2 (613-692)||(12734697-12734776)
chr2 (604-682)||(9647805-9647883)
chr2 (613-683)||(24583837-24583907)
chr2 (620-690)||(43752159-43752229)
chr2 (613-691)||(45367830-45367908)
chr2 (613-690)||(36183451-36183528)
chr2 (613-690)||(41763247-41763324)
chr2 (613-689)||(11992313-11992389)
chr2 (607-682)||(14197361-14197437)
chr2 (616-692)||(38429882-38429958)
chr2 (613-689)||(41197433-41197509)
chr2 (603-675)||(41858746-41858818)
chr2 (621-693)||(44437934-44438006)
chr2 (638-689)||(1456231-1456282)
chr2 (613-692)||(3243858-3243937)
chr2 (613-692)||(18424582-18424661)
chr2 (604-690)||(11412721-11412807)
chr2 (614-692)||(16097192-16097270)
chr2 (601-690)||(38434951-38435041)
chr2 (613-665)||(451853-451905)
chr2 (602-666)||(9556563-9556627)
chr2 (622-690)||(18188780-18188848)
chr2 (638-690)||(18958907-18958959)
chr2 (613-692)||(4807594-4807672)
chr2 (612-667)||(12026209-12026264)
chr2 (635-690)||(12882267-12882322)
chr2 (621-690)||(4598775-4598844)
chr2 (621-690)||(37481830-37481899)
chr2 (613-666)||(38264370-38264422)
chr2 (601-690)||(42092517-42092606)
chr2 (601-658)||(43260436-43260493)
[»] scaffold0325 (1 HSPs)
scaffold0325 (622-686)||(11802-11866)
[»] scaffold0570 (1 HSPs)
scaffold0570 (613-689)||(1153-1229)
[»] scaffold0113 (1 HSPs)
scaffold0113 (622-692)||(11810-11880)
[»] scaffold0024 (1 HSPs)
scaffold0024 (613-692)||(82719-82798)
[»] scaffold0003 (1 HSPs)
scaffold0003 (601-654)||(346966-347019)


Alignment Details
Target: chr8 (Bit Score: 666; Significance: 0; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 666; E-Value: 0
Query Start/End: Original strand, 19 - 692
Target Start/End: Original strand, 2775840 - 2776513
Alignment:
Q  19 gtgaatgatttggtgcagaaactagaaaacaatcattttgtttgctaactattctataattattatgcagacaaaaaactgtaagagaaacgacagacct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2775840 gtgaatgatttggtgcagaaactagaaaacaatcattttgtttgctaactattctataattattatgcagacaaaaaactgtaagagaaacgacagacct 2775939  T
Q  119 aatttggtagagtagaggtgtgaactcaatcgcatgccataattttgagtgttgtgcagcccttgacctgcgacagcctaaacaagcataacaacaataa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2775940 aatttggtagagtagaggtgtgaactcaatcgcatgccataattttgagtgttgtgcagcccttgacctgcgacagcctaaacaagcataacaacaataa 2776039  T
Q  219 ggaacagtattaaactaaacatttcttttcatcctatacacaaaacctctatatatttacaagaacctcttaatcttataccaataaaattattaagaat 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776040 ggaacagtattaaactaaacatttcttttcatcctatacacaaaacctctatatatttacaagaacctcttaatcttataccaataaaattattaagaat 2776139  T
Q  319 atcacaaataacaatcaatagtgtatagtaaaaagatagaaaattcatatatcgaaatacacgaaagagtaaatacaatatagtaaatcacaactcatta 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776140 atcacaaataacaatcaatagtgtatagtaaaaagatagaaaattcatatatcgaaatacacgaaagagtaaatacaatatagtaaatcacaactcatta 2776239  T
Q  419 attaagataagagtttttcagtgcttcttccatttccagttacaacagcagcagcaacaacaatgaagccttatcccactatcgaatgctgtctcaaata 518  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776240 attaagataagagtttttcagtgcttctttcatttccagttacaacagcagcagcaacaacaatgaagccttatcccactatcgaatgctgtctcaaata 2776339  T
Q  519 tcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctccccttactagagaatctac 618  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776340 tcatatctctatccaaatcattaatatctagatcgttcttaatcgtttttcttatagttttcctaggtctacatctgcctccccttactagagaatctac 2776439  T
Q  619 gggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776440 gggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 2776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 610 - 690
Target Start/End: Complemental strand, 9695711 - 9695631
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  9695711 agaatctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctacccc 9695631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 601 - 689
Target Start/End: Complemental strand, 7046423 - 7046335
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||| |||| ||||| || ||||||| |||||||||||||| |||||||||| ||| |||||| |||||||||| ||||||||||    
T  7046423 ccttactacagaagctacgtgttttctctctacatgcccaaaccagctaagccgaggttccaccatcttttctacgattggtgctaccc 7046335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 688
Target Start/End: Original strand, 12491343 - 12491418
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  12491343 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 36545226 - 36545147
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||| ||||||||    
T  36545226 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttaccccca 36545147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 36565446 - 36565525
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||| ||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  36565446 atctacgggtattctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 36565525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 18125250 - 18125171
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||  ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  18125250 atctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 18125171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 621 - 687
Target Start/End: Original strand, 18474173 - 18474239
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||||| |||||| ||||||| ||||||| |||||| |||||||||||||| |||||||||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctac 18474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 601 - 689
Target Start/End: Complemental strand, 79132 - 79041
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgag---tttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||| | ||||||| ||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||||  |||||| |||||    
T  79132 ccttactacaaaatctacaggtcttctctatacatgcccaaaccacctaagcctagtaatttctaccatcatttctactgtaggtgttaccc 79041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 602 - 675
Target Start/End: Complemental strand, 30748545 - 30748472
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||  | ||| |||||| |||||||    
T  30748545 cttactatagaatctacaggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctac 30748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 10079978 - 10080054
Alignment:
Q  512 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    ||||||||||||| ||||||||| |||||||| |||||| | |||||||  ||||||||||||||||  ||||||||    
T  10079978 tcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtct 10080054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 36395154 - 36395234
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacct-aagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| ||||||||||| |||||||||||||| || ||||| | ||||||||| | ||||||| ||||||||||||||||    
T  36395154 atctacaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctaccccca 36395234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 614 - 690
Target Start/End: Complemental strand, 45419313 - 45419237
Alignment:
Q  614 tctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| |||||| |||| |||||||||||||||||||| | | ||| ||||||| ||||||| ||||||||||||||    
T  45419313 tctacaggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctacccc 45419237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 39946934 - 39946855
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| |||||||| || ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  39946934 atctacaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 39946855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 40813401 - 40813322
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| | ||||||||| |||||||||||||| |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  40813401 atctacagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccca 40813322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 651
Target Start/End: Original strand, 17491767 - 17491864
Alignment:
Q  554 ttcttaatcgtttttcttatagttttcctaggtctacatctgcctccccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaag 651  Q
    |||||||| |||| ||||| |||||| |||||||| | | |||||| |||||||| | ||| ||  ||||||||||| |||| |||||||||||||||    
T  17491767 ttcttaatagtttctcttacagtttttctaggtcttcctgtgcctctccttactacaaaatgtataggtcttctctctacatacccaaaccacctaag 17491864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 29700365 - 29700276
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| |||||| |  |||||| |||| | |||||||||||||||||||| | ||||  ||||| ||||||| ||||||||||||||    
T  29700365 ccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctacccc 29700276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 11523928 - 11524008
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacct-aagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| || ||||| | |  |||||| | ||||||| ||||||||||||||||    
T  11523928 atctacgggtcttctctctacatgcccaaaccatctaaagcctattaactaccaacttttctactataggtgctaccccca 11524008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 588
Target Start/End: Original strand, 38178335 - 38178407
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    ||||||||||||||||||| |||||||| |||||  | || ||||| |||| |||||||||||| ||||||||    
T  38178335 atatcatatctctatccaactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtct 38178407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 625 - 692
Target Start/End: Complemental strand, 2796622 - 2796555
Alignment:
Q  625 tctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||| ||||||||||    
T  2796622 tctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggcgctaccccca 2796555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 635 - 690
Target Start/End: Original strand, 33666726 - 33666781
Alignment:
Q  635 tgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||    
T  33666726 tgcccaaaccatttaagtagagtttctaccatcttttctacgataggtgctacccc 33666781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 42854209 - 42854288
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | | ||| | ||||||| ||||||||    
T  42854209 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttctctgctataggtgttaccccca 42854288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 32043660 - 32043590
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| ||||| |||||||||| ||| | ||||||||||||| ||| ||| ||||||| ||||||    
T  32043660 ggtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtgatacccc 32043590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 690
Target Start/End: Original strand, 41444550 - 41444608
Alignment:
Q  632 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| ||||||||||||| || |||||| |||||| ||||||| ||||||||||||||    
T  41444550 acatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctacccc 41444608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 681
Target Start/End: Complemental strand, 38689616 - 38689547
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatagg 681  Q
    |||||||  |||||||||| | ||| | ||||||||||||| |||||||||||||| ||||||| |||||    
T  38689616 aatctacaagtcttctctctagatgtcaaaaccacctaagctgagtttctaccatcttttctacaatagg 38689547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 593
Target Start/End: Original strand, 39967579 - 39967651
Alignment:
Q  521 atatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatc 593  Q
    ||||||| |||||| ||||||||  ||||| | |||||||| |||| |||||||||||| ||||| |||||||    
T  39967579 atatctcaatccaactcattaatcgctagatctttcttaatagtttctcttatagtttttctaggcctacatc 39967651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 692
Target Start/End: Original strand, 8879649 - 8879724
Alignment:
Q  617 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||| |||| |||||| || ||||| | | ||||||||| | ||||||| ||||||||| ||||||    
T  8879649 acgggtcttctctctacatacccaaatcatctaagtctattttctaccaacttttctactataggtgcttccccca 8879724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 599
Target Start/End: Original strand, 35643685 - 35643764
Alignment:
Q  520 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    ||||| || |||||| |||||||| |||||| | ||||||||  ||| |||||||||||| |||||||| | ||||||||    
T  35643685 catatttcgatccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctc 35643764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 644 - 686
Target Start/End: Complemental strand, 7103316 - 7103274
Alignment:
Q  644 cacctaagccgagtttctaccatcatttctacgataggtgcta 686  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||    
T  7103316 cacctaagcctagtttctaccatcttttctactataggtgcta 7103274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 675
Target Start/End: Original strand, 35643814 - 35643868
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    |||||||||| |||||||||||||||||||||  | |||| |||||| |||||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctac 35643868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 4011283 - 4011218
Alignment:
Q  523 atctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||| ||||||| |||||||| | |||| | |||||||| |||| |||||||||||| ||||||||    
T  4011283 atctttatccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtct 4011218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 25985587 - 25985519
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| |||||| ||| |||  ||| | ||||||||||||| ||||||| ||||||||||||||    
T  25985587 gtcttctctca-catgccaaaatcacgcaagtctagtttctaccatcttttctactataggtgctacccc 25985519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 666
Target Start/End: Complemental strand, 30559782 - 30559717
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 666  Q
    |||||||| | |||||||  |||||||||| | |||||||||||||||||||| | |||| |||||    
T  30559782 ccttactacaaaatctacatgtcttctctctaaatgcccaaaccacctaagcctattttcgaccat 30559717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 612 - 690
Target Start/End: Original strand, 19262637 - 19262715
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  19262637 aatctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctacccc 19262715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 13859213 - 13859292
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  13859213 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 13859292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 49029353 - 49029274
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  49029353 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 49029274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 601 - 687
Target Start/End: Complemental strand, 12966111 - 12966025
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||||||  |||||| |||||| ||||| | |||||||||||    
T  12966111 ccttactacagaatttacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 28021032 - 28020964
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctacccc 28020964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 616 - 692
Target Start/End: Complemental strand, 34869494 - 34869418
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  34869494 tacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 34869418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 2885927 - 2886006
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||| ||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  2885927 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 2886006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 688
Target Start/End: Original strand, 12841480 - 12841555
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  12841480 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 12841555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 31005300 - 31005221
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  31005300 atctacgggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccca 31005221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 33073029 - 33072950
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  33073029 atctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccccca 33072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 688
Target Start/End: Original strand, 35906406 - 35906481
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  35906406 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 35906481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 38607081 - 38607002
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  38607081 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacctttctactataggtgctaccccca 38607002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 43281751 - 43281672
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  43281751 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 45836685 - 45836764
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  45836685 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 45836764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 604 - 690
Target Start/End: Original strand, 36514403 - 36514489
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| |||||| ||  ||| |||||| |||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  36514403 tactacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccc 36514489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 37618022 - 37617942
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccga-gtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| |  ||||||||| | ||||||| ||||||||||||||||    
T  37618022 atctacgggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctaccccca 37617942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 6374945 - 6374866
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| ||||||||||| |||||| ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  6374945 atctactggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 6374866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 621 - 684
Target Start/End: Complemental strand, 7220813 - 7220750
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgc 684  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 11594037 - 11593958
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| |||| |  | ||||||||| | ||||||| ||||||||||||||||    
T  11594037 atctacgggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctaccccca 11593958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 33350011 - 33350090
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | |||||| || | ||||||| |||||||| |||||||    
T  33350011 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgcaaccccca 33350090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 602 - 689
Target Start/End: Complemental strand, 40830311 - 40830224
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    ||||||| ||||| | | |||||||||||  |||||||||||||||||||  |||||||||||||| ||||| | |||||||||||||    
T  40830311 cttactatagaatttgcaggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctaccc 40830224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 44855377 - 44855456
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |||||| ||| |||||    
T  44855377 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtactatcccca 44855456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 46356061 - 46356140
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||| |||||||||| |||||||||||||| |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  46356061 atctacgtgtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccca 46356140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 687
Target Start/End: Original strand, 28628126 - 28628212
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||| | ||||||| ||| ||||||  |||||||||||||||||||||| | |||| ||||||||||||||  ||||||||||    
T  28628126 ccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctac 28628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 613 - 691
Target Start/End: Original strand, 36869449 - 36869527
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 691  Q
    |||||||||||||||||| ||||| |||||||| |||| || | ||||||||| | ||||||| |||||||||||||||    
T  36869449 atctacgggtcttctctctacatgaccaaaccatctaaacctattttctaccaacttttctactataggtgctaccccc 36869527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 612 - 690
Target Start/End: Complemental strand, 40169727 - 40169649
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| ||||| |||| |||||||||||||||||||||| | |||| |||||| ||||||| ||| ||||||||||    
T  40169727 aatctacgtgtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctacccc 40169649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 625 - 690
Target Start/End: Complemental strand, 38920859 - 38920794
Alignment:
Q  625 tctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| ||||||||||||||| |||||| |||||| |||||| ||||||| ||||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctacccc 38920794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 39812046 - 39811957
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| |||||||||   ||||||||| |||||||||||| |||||||||||||||  |||||  |||||| |||||||||| ||||    
T  39812046 ccttactatagaatctacatctcttctctctacatgcccaaactacctaagccgagttttcaccattttttctatgataggtgctgcccc 39811957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 42187559 - 42187470
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | ||||||| || |||||||  |||||||||||||||||||||| | |||| |||||| ||||||  ||||||||||||||    
T  42187559 ccttactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctacccc 42187470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 47848743 - 47848674
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| |||||||||||||||||||||| | |||| |||||| ||||||| ||||| ||||||||    
T  47848743 gtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctacccc 47848674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 622 - 690
Target Start/End: Original strand, 27021906 - 27021974
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| |||||||||||||||||||||| |||||  |||| | ||||||| ||||||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctacccc 27021974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 689
Target Start/End: Original strand, 31682807 - 31682883
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||||||||||| |||| ||||||||| ||||||| | ||||||||| | ||||||| ||| |||||||||    
T  31682807 atctacgggtcttctctctacatacccaaaccatctaagcctattttctaccaacttttctactatatgtgctaccc 31682883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 689
Target Start/End: Original strand, 39906575 - 39906651
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    ||||| |||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| |||||||||||||    
T  39906575 atctatgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccc 39906651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 616 - 687
Target Start/End: Complemental strand, 22349694 - 22349623
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    ||||||||||||||| ||||||| |||||| ||||||| | ||||||||| | ||||||| |||||||||||    
T  22349694 tacgggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 29650461 - 29650382
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | |||||||||   ||||||| ||||||||| ||||||    
T  29650461 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctgccccca 29650382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 624 - 690
Target Start/End: Original strand, 7189442 - 7189508
Alignment:
Q  624 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| |||||||||||||||||||||  | ||||||||||| ||||||| |||||||| |||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgacccc 7189508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 632 - 690
Target Start/End: Original strand, 30914692 - 30914750
Alignment:
Q  632 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||| ||||||||||||||||||  ||||||| |||||| |||||||    
T  30914692 acatgcccaaaccaccaaagccgagtttctaccattttttctacaataggtactacccc 30914750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 43491385 - 43491308
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||| |||||||||||||| ||||||| | |||||||||   ||| ||| ||||||| ||||||    
T  43491385 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttatactataggtgttacccc 43491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 605 - 690
Target Start/End: Complemental strand, 45558447 - 45558362
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||| |||||| || ||| ||||||| || ||| ||||||||||||| ||||||||||||| | ||||||| ||||||| ||||||    
T  45558447 actacagaatccacaggtattctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttctactataggtggtacccc 45558362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 665
Target Start/End: Original strand, 6420683 - 6420747
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctacca 665  Q
    |||||||| || ||||||  |||||||||| |||||||||||||||||||||| |||||| ||||    
T  6420683 ccttactacagtatctacaagtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 680
Target Start/End: Original strand, 25826682 - 25826742
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatag 680  Q
    ||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||| ||||    
T  25826682 ggtcttctctccacattcgcaaaccacccaagccgagtttctaccatcttttctacaatag 25826742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 690
Target Start/End: Complemental strand, 28858132 - 28858044
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| |||||| || |||| ||| || |||||||||||||||||||   |||||||||||||  ||||||| |||||||| |||||    
T  28858132 cttactatagaatccacaggtcatctttctacatgcccaaaccacctaacttgagtttctaccatgttttctacaataggtgccacccc 28858044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 660
Target Start/End: Original strand, 24549902 - 24549945
Alignment:
Q  617 acgggtcttctctcaacatgcccaaaccacctaagccgagtttc 660  Q
    |||||||||||||| |||||||||||||||||||||| ||||||    
T  24549902 acgggtcttctctctacatgcccaaaccacctaagcctagtttc 24549945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 690
Target Start/End: Complemental strand, 30633035 - 30632968
Alignment:
Q  623 cttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| |||||||||||||| |||||||||| ||| |||||  ||| || |||||||||||||||    
T  30633035 cttctctctacatgcccaaaccatctaagccgagcttccaccattttttttatgataggtgctacccc 30632968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 613 - 683
Target Start/End: Complemental strand, 7273116 - 7273046
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||| ||||||||||  |||||||||||||| ||||||| | ||||||||| | ||||||| |||||||    
T  7273116 atctacaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 690
Target Start/End: Complemental strand, 36136830 - 36136764
Alignment:
Q  624 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| | |||||||||| ||||||| | | ||||||||||| ||||||| ||||||||||||||    
T  36136830 ttctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctacccc 36136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 674
Target Start/End: Complemental strand, 41948586 - 41948532
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    ||||||||||| ||||||||||||||| |||||| |||||| |||||| ||||||    
T  41948586 ggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 690
Target Start/End: Complemental strand, 5336005 - 5335920
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||| |||||| || | ||||||||| | |||||||||||||||||| | |||||| |||||| || |||| |||| |||||||||    
T  5336005 actacagaatccacagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctacccc 5335920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 14593845 - 14593772
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||| || ||||||||| | ||||||||||| |||||||| | ||||||||||||  ||||||| |||||||    
T  14593845 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 18605350 - 18605427
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||  |||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||  |||||||||||||    
T  18605350 aatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18605427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 689
Target Start/End: Complemental strand, 18637640 - 18637563
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||  |||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||  |||||||||||||    
T  18637640 aatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18637563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 689
Target Start/End: Complemental strand, 18651074 - 18650997
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||  |||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||  |||||||||||||    
T  18651074 aatctacatgtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctaccc 18650997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 43282477 - 43282408
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| ||||||||||  |||||||||| |||||| |||  | ||||||| ||||||||||||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctacccc 43282408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 666
Target Start/End: Original strand, 48202895 - 48202960
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 666  Q
    |||||||| |||||||||  |||||||||| |||||| ||||||||||||||| || ||| |||||    
T  48202895 ccttactacagaatctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 12966219 - 12966151
Alignment:
Q  520 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    ||||| |||||||||||||||||| |||| |   |||||||| |||| |||||||||||| ||||||||    
T  12966219 catatttctatccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtct 12966151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 672
Target Start/End: Complemental strand, 30144861 - 30144793
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc 672  Q
    ||||| |||||||||  |||||||||| || ||||||||| ||||||||||  ||||||||||| ||||    
T  30144861 tactatagaatctacaagtcttctctctacctgcccaaactacctaagccggatttctaccatcttttc 30144793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 620 - 688
Target Start/End: Original strand, 36101977 - 36102045
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||||||||| |||| ||||||||||||||||| | |||| | |||| ||||||  ||||||||||||    
T  36101977 ggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctacc 36102045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 683
Target Start/End: Original strand, 40008636 - 40008692
Alignment:
Q  627 tctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||| ||||||||||||||||||| ||||||||| |||||| |||||  ||||||||    
T  40008636 tctctacatgcccaaaccacctaatccgagtttccaccatcttttctttgataggtg 40008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 649
Target Start/End: Original strand, 43791638 - 43791682
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccaccta 649  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||    
T  43791638 actacagaatctacaggtcttctctccacatgcccaaaccaccta 43791682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 672
Target Start/End: Original strand, 38135405 - 38135476
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc 672  Q
    |||||||| | ||||||| |||||||| || ||||| |||||||||||||||| | |||| |||||| ||||    
T  38135405 ccttactacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 588
Target Start/End: Complemental strand, 45601670 - 45601611
Alignment:
Q  529 atccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||||| |||||||| |||||| | |||||||| |||| |||||||||||| ||||||||    
T  45601670 atccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtct 45601611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 46014386 - 46014464
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||| |||||||||||| ||||| || ||||| ||||||| | ||||||||| | ||||||| |||||||| |||||||    
T  46014386 atctatgggtcttctctctacatgtcc-aaccatctaagcctattttctaccaacttttctactataggtgcaaccccca 46014464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 599
Target Start/End: Complemental strand, 1569210 - 1569140
Alignment:
Q  529 atccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    |||||| |||||||| |||||| | |||||||| |||  |||||||||||| ||||| |||| ||||||||    
T  1569210 atccaactcattaatctctagatctttcttaatagttactcttatagtttttctaggactacctctgcctc 1569140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 675
Target Start/End: Complemental strand, 36652069 - 36652007
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    |||||||||||||||||| ||||||  |||||| ||||||| | ||||||||| | |||||||    
T  36652069 atctacgggtcttctctctacatgctgaaaccatctaagcctattttctaccaacttttctac 36652007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 632 - 690
Target Start/End: Complemental strand, 46989961 - 46989903
Alignment:
Q  632 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||||||||||||  ||  ||| |||||| ||||||| ||||||||||||||    
T  46989961 acatgcccaaaccacctaagatgaaattcaaccatcttttctacaataggtgctacccc 46989903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 48736111 - 48736181
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| ||| |||||  ||||||||||||| | ||||||| ||||| |||||||  |||||||||||||    
T  48736111 ggtcttcgctctacatgagcaaaccacctaagtctagtttctcccatcttttctactgtaggtgctacccc 48736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 687
Target Start/End: Original strand, 25579279 - 25579356
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||||  |||||||||| |||| ||||||||||||||||| | |||| |||||  ||||| | || ||||||||    
T  25579279 agaatctacatgtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctac 25579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 666
Target Start/End: Complemental strand, 35713764 - 35713719
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 666  Q
    |||||||||| |||||||||||||||||||||| | |||| |||||    
T  35713764 gtcttctctctacatgcccaaaccacctaagcctattttccaccat 35713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 617 - 690
Target Start/End: Original strand, 31636129 - 31636202
Alignment:
Q  617 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  31636129 acgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccc 31636202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 4496461 - 4496382
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  4496461 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctaccccca 4496382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 24178587 - 24178508
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  24178587 atctacgggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 24178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 33667286 - 33667216
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  33667286 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccc 33667216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 1287784 - 1287863
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  1287784 atctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 1287863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 612 - 690
Target Start/End: Original strand, 18351111 - 18351190
Alignment:
Q  612 aatctacgggtcttctctcaaca-tgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||    
T  18351111 aatctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctacccc 18351190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 38685044 - 38684965
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  38685044 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 38684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 613 - 691
Target Start/End: Original strand, 16347583 - 16347661
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 691  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| |||||||||||||||    
T  16347583 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccc 16347661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 692
Target Start/End: Original strand, 28977067 - 28977143
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||| |||||| ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  28977067 tacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 28977143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 612 - 691
Target Start/End: Complemental strand, 15168870 - 15168791
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 691  Q
    ||||||| |||| | |||||||||| ||||||||||| |||| | ||||||||||| ||||||| |||||||||||||||    
T  15168870 aatctacaggtcatttctcaacatgtccaaaccaccttagcctattttctaccatcttttctactataggtgctaccccc 15168791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 1275338 - 1275264
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| ||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||    
T  1275338 tacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc 1275264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 675
Target Start/End: Complemental strand, 42199375 - 42199301
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    |||||||| |||||||||  |||||||||| |||||||||||||||||||| | |||||| |||||| |||||||    
T  42199375 ccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac 42199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 610 - 690
Target Start/End: Complemental strand, 2713024 - 2712944
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| || ||||||||||| |||||||||||||||||||| | ||| ||||||||| |||  || ||||||||||||||    
T  2713024 agaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctacccc 2712944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 689
Target Start/End: Complemental strand, 3301921 - 3301845
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||| |||||||    
T  3301921 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggggctaccc 3301845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 601 - 653
Target Start/End: Complemental strand, 11675599 - 11675547
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagcc 653  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  11675599 ccttactacagaatctacaggccttctctcaacatgcccaaaccacctaagcc 11675547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 12492589 - 12492671
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacga---taggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |   |||||||||||||||    
T  12492589 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagtaggtgctaccccca 12492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 622 - 690
Target Start/End: Original strand, 15489706 - 15489774
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| |||||||||||||| |||||| ||||||| |||||| ||||||| |||||| |||||||    
T  15489706 tcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactacccc 15489774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 620 - 692
Target Start/End: Complemental strand, 34273097 - 34273025
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||  ||||||||||||||||    
T  34273097 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctaccccca 34273025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 2075679 - 2075758
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | | ||||||| | |||||||  |||||| ||||||||    
T  2075679 atctacgggtcttctctctacatgcccaaaccatctaagcctattgtctaccaacttttctactgtaggtgttaccccca 2075758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 690
Target Start/End: Original strand, 10082934 - 10083021
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| |||||| ||  |||||||||| ||||||| ||||||| |||| | ||||||||||||| ||||||| ||||||| ||||||    
T  10082934 ttactacagaatccacaagtcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactataggtgatacccc 10083021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 14665791 - 14665712
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | |||||| || | | ||||| ||||||||||||||||    
T  14665791 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctaccccca 14665712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 617 - 683
Target Start/End: Complemental strand, 1525717 - 1525651
Alignment:
Q  617 acgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||||||||| ||||| |||| ||||||||| | ||||||||||||| ||||||| |||||||    
T  1525717 acgggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttctacaataggtg 1525651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 613 - 687
Target Start/End: Complemental strand, 20456850 - 20456776
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||||||||||||| |||||  ||||||| ||||||| | ||||||||| | ||||||| |||||||||||    
T  20456850 atctacgggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctac 20456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 613 - 687
Target Start/End: Complemental strand, 43475317 - 43475243
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||| |||||||||||   || ||||||||||||||||| |||||| |||||| ||||||| |||||||||||    
T  43475317 atctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 667
Target Start/End: Original strand, 4026528 - 4026594
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatc 667  Q
    |||||||| ||||||||| ||||| ||||| ||||| |||||||||||||| | |||||| ||||||    
T  4026528 ccttactacagaatctacaggtctcctctctacatgtccaaaccacctaagactagtttccaccatc 4026594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 687
Target Start/End: Complemental strand, 14749396 - 14749310
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||| | |||||| || ||||||||||| ||||| |||||||| ||||| | |||||||||||   ||||||| |||||||||||    
T  14749396 ccttacaacagaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctac 14749310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 683
Target Start/End: Complemental strand, 21952446 - 21952364
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||| |||||| || || |||||||| ||||| ||||||||||| || | ||||||| ||||| ||||||| |||||||    
T  21952446 ccttactatagaatccacaggacttctctctacatgtccaaaccacctgagtctagtttctgccatcttttctactataggtg 21952364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 621 - 683
Target Start/End: Original strand, 36123405 - 36123466
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||  ||||||| |||||||    
T  36123405 gtcttctctctacatgcccaaatcacctaagtcgagtttctaccat-ttttctacaataggtg 36123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 689
Target Start/End: Original strand, 11002647 - 11002704
Alignment:
Q  632 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||||||||||||| | ||||||||||||  |||||||  ||||||||||||    
T  11002647 acatgcccaaaccacctaagtctagtttctaccatgttttctactgtaggtgctaccc 11002704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 689
Target Start/End: Complemental strand, 28676665 - 28676596
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    ||||||||||| ||||||| |||||||||||| | | |||| |||||| ||||||| |||| ||||||||    
T  28676665 ggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctaccc 28676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 42199601 - 42199528
Alignment:
Q  515 aatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||| ||||| ||||||||| ||||||||||||||| | |||| ||| |||| ||| |||||||| ||||||||    
T  42199601 aataccatatttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtct 42199528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 690
Target Start/End: Original strand, 418178 - 418269
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccac--ctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||  |||||||||  || ||||||| ||||||||||||||   ||||||| | ||||| ||||| ||||||| ||||||||||||||    
T  418178 ccttactctagaatctacaagtattctctctacatgcccaaaccaggtctaagccaaatttctgccatcttttctaccataggtgctacccc 418269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 686
Target Start/End: Complemental strand, 37065597 - 37065533
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 686  Q
    ||||||||| |||||||||||  ||| ||| | ||||||||||||| ||||||| ||||||||||    
T  37065597 tcttctctctacatgcccaaatgacccaagtctagtttctaccatcttttctactataggtgcta 37065533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 689
Target Start/End: Original strand, 43558040 - 43558108
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||| | |||||||||||||||||||  |||||| |||||| ||||||  |||| ||||||||    
T  43558040 gtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctaccc 43558108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 688
Target Start/End: Complemental strand, 17213146 - 17213079
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||||| ||||| |||  |||||||||||| ||||||||||| ||| ||||||| |||| |||||||    
T  17213146 gtcttctttcaacgtgcaaaaaccacctaagtcgagtttctacaatcttttctacaatagatgctacc 17213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 520 - 598
Target Start/End: Complemental strand, 14749510 - 14749432
Alignment:
Q  520 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcct 598  Q
    ||||| ||||||||| || ||||| |||||| | ||||| || |||| |||||||||||| |||||||| | |||||||    
T  14749510 catatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttcctctgcct 14749432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 650
Target Start/End: Complemental strand, 79602 - 79553
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaa 650  Q
    |||||||| ||||||||  ||||||||||| ||||| |||||||||||||    
T  79602 ccttactacagaatctataggtcttctctctacatgtccaaaccacctaa 79553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 690
Target Start/End: Complemental strand, 14667816 - 14667763
Alignment:
Q  637 cccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||||||| | | |||| |||||| ||||||| ||||||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctacccc 14667763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 606 - 687
Target Start/End: Complemental strand, 38868966 - 38868885
Alignment:
Q  606 ctagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||||||||  || ||||||| ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  38868966 ctagagaatctactagtgttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 1210822 - 1210743
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  1210822 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 1210743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 34792554 - 34792633
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  34792554 atctacgggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctaccccca 34792633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 613 - 689
Target Start/End: Complemental strand, 51602133 - 51602057
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |||||||||||||    
T  51602133 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 51602057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 8671995 - 8671916
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||| ||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  8671995 atctacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 8671916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 15086011 - 15085932
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  15086011 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 15085932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 22090173 - 22090094
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||| | |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  22090173 atctacgggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 22090094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 30202335 - 30202414
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  30202335 atctacgggtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtgctaccccca 30202414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 687
Target Start/End: Complemental strand, 5338813 - 5338727
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||| || |||||| |||||||||||  ||||||||||||||||||||  |||||| |||||| ||||||| |||||||||||    
T  5338813 ccttactaaagcatctacaggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgctac 5338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 690
Target Start/End: Original strand, 52073655 - 52073745
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgag-tttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| ||||||||   |||||||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||    
T  52073655 ccttactatagaatctatatgtcttctctctacatgtccaaaccacctaagccgagttttttaccatcttttctacaataggtgctacccc 52073745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 602 - 690
Target Start/End: Complemental strand, 43423807 - 43423719
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| | |||||||  |||||||||| ||||| |||||||||||||||| |||||| |||||| ||||||| ||||||| ||||||    
T  43423807 cttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttacccc 43423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 696346 - 696267
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||| ||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  696346 atctacgggtcttctctctacatgtccaagccatctaagcctattttctaccaacttttctactataggtgctaccccca 696267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 4001660 - 4001739
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||| ||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  4001660 atctacgggtctcctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 4001739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 9592811 - 9592732
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||| ||| ||||||| | ||||||| | | ||||||| ||||||||||||||||    
T  9592811 atctacgggtcttctctctacatgcccaacccatctaagcctattttctacaaacttttctactataggtgctaccccca 9592732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 690
Target Start/End: Original strand, 48431601 - 48431688
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| | |||||||  |||||||||| |||||||||||||||||||||| | |||| |||||| ||||||| ||||| ||||||||    
T  48431601 ttactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctacccc 48431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 51440970 - 51441049
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||| ||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||| ||||||||    
T  51440970 atctccgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttaccccca 51441049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 9509388 - 9509318
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| |||||||||||| ||||||||| | ||| ||||||| ||||||| ||||||||||||||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctacccc 9509318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 687
Target Start/End: Complemental strand, 40416460 - 40416374
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||| | ||||||| | ||||||||| ||||||| ||||||||||||||  ||||| |||||| ||||||| |||||||||||    
T  40416460 ccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctac 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 2544688 - 2544599
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| ||||||||  ||||||||||| ||||| |||||||||||||| |   |||| |||||| ||||||| ||||||||||||||    
T  2544688 ccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctacccc 2544599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 620 - 676
Target Start/End: Original strand, 16822234 - 16822290
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacg 676  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||    
T  16822234 ggtcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctacg 16822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 604 - 688
Target Start/End: Original strand, 27848001 - 27848085
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||| || |||||| |||||||||||  ||||||||||||||||||||  | ||||||||||| ||||||| | ||||||||||    
T  27848001 tactacagcatctacaggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctacc 27848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 32404719 - 32404807
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||| ||||||||| ||||||||||| ||||  |||||||||||||||| | |||| |||||| ||| ||| ||||||| |||||    
T  32404719 ccttactatagaatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttaccc 32404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 604 - 659
Target Start/End: Original strand, 10569263 - 10569318
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagttt 659  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10569263 tactacagaatctacaggtcttctctctacatgcccaaaccacctaagccaagttt 10569318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 32082950 - 32083029
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||| |||||  |||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  32082950 atctacgggtctcctctctgcatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 32083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 621 - 692
Target Start/End: Original strand, 32231167 - 32231238
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||| |||||||||||||| ||||||| | |||||||||   ||||||| ||||||||||||||||    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctaccccca 32231238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 620 - 687
Target Start/End: Complemental strand, 39140590 - 39140523
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    ||||||||||| |||||||||||||||||||||| | ||| | ||||| ||||||| |||||||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctac 39140523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 687
Target Start/End: Original strand, 14226022 - 14226108
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||| | ||||||| ||  | ||||| |||||||||||||||||||||| | |||| |||||| |||||| ||||||||||||    
T  14226022 ccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggtgctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 603 - 688
Target Start/End: Original strand, 3819051 - 3819136
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||||||||||| ||  ||||||| || ||||||||||||||| |||| | |||| | |||||| ||||||| ||||||||||||    
T  3819051 ttactagagaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctacc 3819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 46388465 - 46388392
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    |||||||| |||||||||  |||||||||| |||||  ||||| |||||||||||||||| |||||| ||||||    
T  46388465 ccttactacagaatctacaagtcttctctctacatgtgcaaactacctaagccgagtttccaccatcttttcta 46388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 613 - 690
Target Start/End: Original strand, 49347598 - 49347675
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||||||||||  |||| |||||||| ||||||| | ||||||||| | ||||||| |||| |||||||||    
T  49347598 atctacgggtcttctctctgcatgaccaaaccatctaagcctattttctaccaacttttctactatagatgctacccc 49347675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 690
Target Start/End: Complemental strand, 1661510 - 1661430
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||  ||||||||||| |||||| ||||||| || |||| | |||| |||||| ||||||| ||||||||||||||    
T  1661510 agaatctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctacccc 1661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 693
Target Start/End: Original strand, 13827763 - 13827855
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaa 693  Q
    |||||||| |||||||||   ||||||||| ||||| ||||||||||| | || |||||| ||| || ||||||| |||||| ||||||||||    
T  13827763 ccttactacagaatctacacttcttctctctacatgtccaaaccaccttaccctagtttccaccgtcttttctactataggtactacccccaa 13827855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 4029199 - 4029120
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||  ||||||| | ||||||||| | | |||||  |||||||||||||||    
T  4029199 atctacgggtcttctctctacatgtccaaaccttctaagcctattttctaccaacttgtctactctaggtgctaccccca 4029120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 8391849 - 8391770
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||| ||||| ||||| |||||| | |||| || | ||||||||| | ||||||| ||||||||||||||||    
T  8391849 atctacgggtctcctctctacatgtccaaacaatctaaacctattttctaccaacttttctactataggtgctaccccca 8391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 611 - 690
Target Start/End: Original strand, 13827920 - 13827999
Alignment:
Q  611 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||| ||| ||||||||||| |||||  |||||||||||| || |||||| |||||| ||||||| ||||||||| ||||    
T  13827920 gaatatacaggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgctgcccc 13827999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 38807876 - 38807955
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||| |||||||||||  ||||||| |||||| ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  38807876 atctaagggtcttctctttacatgcctaaaccatctaagtctattttctaccaacttttctactataggtgctaccccca 38807955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 43240584 - 43240663
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||| ||||| | ||||||| | |||||| ||   ||||||| ||||||||||||||||    
T  43240584 atctacgggtcttctctctacatgctcaaactatctaagcctattttctatcaatttttctactataggtgctaccccca 43240663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 8343070 - 8343140
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| |||||||||  ||||||||||| |||||| |||||| ||||||| | ||||| ||||||    
T  8343070 ggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctactaaaggtgttacccc 8343140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 613 - 663
Target Start/End: Original strand, 25979436 - 25979486
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctac 663  Q
    |||||||||||||||||| ||||| |||||||| ||||||| |||||||||    
T  25979436 atctacgggtcttctctctacatgtccaaaccatctaagcctagtttctac 25979486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 687
Target Start/End: Original strand, 35828743 - 35828829
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||| | ||||||  ||||||||||| ||| | ||||||||||||| || | |||| |||||| ||||||| |||||||||||    
T  35828743 ccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 690
Target Start/End: Complemental strand, 37263397 - 37263331
Alignment:
Q  624 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| |||||||||||||||  ||| | ||||||||| ||| ||||||| ||||||||||||||    
T  37263397 ttctctctacatgcccaaaccactgaagtctagtttctactatcttttctactataggtgctacccc 37263331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 573
Target Start/End: Complemental strand, 15577629 - 15577568
Alignment:
Q  512 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttat 573  Q
    ||||||||||||||||||||||| |||||||| |||| | | |||||||| |||| ||||||    
T  15577629 tcaaatatcatatctctatccaactcattaatctctatatccttcttaatagtttctcttat 15577568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 17275285 - 17275196
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | ||||||| ||  ||||||| |||||| ||||||||||||||| |||||| || ||| ||||||| ||||  ||||||||    
T  17275285 ccttactacaaaatctacagggattctctctacatgcacaaaccacctaagccaagtttccacaatcttttctactatagaagctacccc 17275196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 8342952 - 8343028
Alignment:
Q  512 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||||||  |||| ||||||||| |||||||| |||||| | || ||||| |||| |||||||||||| ||||||||    
T  8342952 tcaaatactatatttctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtct 8343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 662
Target Start/End: Complemental strand, 44008656 - 44008616
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttcta 662  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  44008656 tcttttctctacatgcccaaaccacctaagccgagtttcta 44008616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 688
Target Start/End: Original strand, 27637846 - 27637913
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||| |||| ||||||||||| |||||||| | |||||||| |||| ||||| | ||||||||||||    
T  27637846 gtcttttctctacatgcccaaaacacctaagtctagtttctatcatcttttctgctataggtgctacc 27637913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 611 - 689
Target Start/End: Complemental strand, 10272338 - 10272260
Alignment:
Q  611 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    ||||| || ||||||||||| ||||||| ||||||| | || | ||||||||||||| ||||||| | |||||| ||||    
T  10272338 gaatccacaggtcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccc 10272260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 579
Target Start/End: Complemental strand, 12231571 - 12231509
Alignment:
Q  517 tatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagtttt 579  Q
    |||||||||||||||||| |||||||| || ||| | |||||||| || | ||||||||||||    
T  12231571 tatcatatctctatccaactcattaatctcgagatctttcttaatagtctctcttatagtttt 12231509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 636 - 690
Target Start/End: Original strand, 37463101 - 37463155
Alignment:
Q  636 gcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||| | |||||||  || ||||||| ||||||||||||||    
T  37463101 gcccaaaccacctaagcctattttctactgtcttttctactataggtgctacccc 37463155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 612 - 686
Target Start/End: Original strand, 38877547 - 38877621
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 686  Q
    ||||||| |||| |||||| ||||||  |||||||||||||||| ||| ||| ||| |||||| ||||| |||||    
T  38877547 aatctacaggtcatctctctacatgcttaaaccacctaagccgaatttttacaatcttttctatgatagatgcta 38877621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 690
Target Start/End: Complemental strand, 51812591 - 51812525
Alignment:
Q  624 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| ||||||||||| ||| |||||| |||||| |||||| ||||||| |||| || ||||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgttacccc 51812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 640 - 690
Target Start/End: Original strand, 52561843 - 52561893
Alignment:
Q  640 aaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||| | |||||| |||||||||||| | ||||||||||||    
T  52561843 aaaccacctaagcctattttctatcatcatttctactaaaggtgctacccc 52561893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 683
Target Start/End: Original strand, 9599620 - 9599669
Alignment:
Q  634 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||| ||||||||||||| | ||||||||||| ||||||| |||||||    
T  9599620 atgcccgaaccacctaagcctattttctaccatcttttctactataggtg 9599669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 23791857 - 23791926
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| |||||| |||||||||||||   ||| ||||||||| ||||||| || ||| |||||||    
T  23791857 gtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttctaccatgggtcctacccc 23791926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 40419708 - 40419639
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| ||||||||||||||| |||| | |||| ||||||||  |||||| ||| || |||||||    
T  40419708 gtcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttctacccc 40419639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 690
Target Start/End: Complemental strand, 43954264 - 43954199
Alignment:
Q  625 tctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| |||||| ||||||||||||||| |||||| | |||  |||||| |||||| ||||||||    
T  43954264 tctctctacatgctcaaaccacctaagccaagtttccatcatattttctaagataggcgctacccc 43954199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 585
Target Start/End: Complemental strand, 46388583 - 46388514
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctagg 585  Q
    |||||||||| |||||||| |||| ||| |||||| | |||||||  |||| |||||||||||| |||||    
T  46388583 atatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctagg 46388514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 585
Target Start/End: Complemental strand, 46395027 - 46394958
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctagg 585  Q
    |||||||||| |||||||| |||| ||| |||||| | |||||||  |||| |||||||||||| |||||    
T  46395027 atatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctagg 46394958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 31545 - 31466
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  31545 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 31466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 601 - 690
Target Start/End: Original strand, 44061 - 44150
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||||||||   ||||||||||| |||||||||||||||||||||| | ||||  ||||| ||||||| ||||||||||||||    
T  44061 ccttactagagaatctgaaggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctacccc 44150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 31960019 - 31960098
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  31960019 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 31960098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 43434001 - 43433922
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  43434001 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43433922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 52569720 - 52569799
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  52569720 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 52569799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 605 - 689
Target Start/End: Original strand, 35555844 - 35555928
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||| |||||| || ||||||||||| | |||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||    
T  35555844 actacagaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccc 35555928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 33227286 - 33227207
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||| | ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  33227286 atctacgggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctaccccca 33227207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 688
Target Start/End: Complemental strand, 53707871 - 53707796
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  53707871 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 53707796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 604 - 690
Target Start/End: Original strand, 40018379 - 40018465
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| ||||| |||  ||||||||||  |||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||||    
T  40018379 tactatagaatatacaagtcttctctcggcatgcccaaaccacataagccaagtttctaccatcttttttacgataggtgctacccc 40018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 612 - 690
Target Start/End: Original strand, 49738808 - 49738886
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| |||||||||||  ||| || |||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  49738808 aatctatgggtcttctctttacacgctcaaatcacctaagccgagtttctaccatcttttctacaataggtgctacccc 49738886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 692
Target Start/End: Original strand, 48622751 - 48622827
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| || |||||||||||||    
T  48622751 tacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctaccccca 48622827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 436306 - 436227
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| ||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  436306 atctacaggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccccca 436227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 4440930 - 4440851
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| | |||||||||||| ||||||| | ||||||||| | ||||||| ||||||||| ||||||    
T  4440930 atctacgggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctgccccca 4440851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 27450384 - 27450463
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| | |||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  27450384 atctacgggtcttctctctacatgtcaaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 27450463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 33191053 - 33191132
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||| | ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  33191053 atctacgggtcttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgctaccccca 33191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 48174298 - 48174377
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||| ||||||||    
T  48174298 atctacgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgttaccccca 48174377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 683
Target Start/End: Complemental strand, 1380456 - 1380374
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||| | ||||||| ||| ||||||| || |||||||||||||||||||||||||||| |||  |||||||| ||||||    
T  1380456 ccttactacaaaatctacaggttttctctctacgtgcccaaaccacctaagccgagtttctatcatgttttctacggtaggtg 1380374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 622 - 688
Target Start/End: Complemental strand, 31459098 - 31459032
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||||||  |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 31459032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 38903924 - 38904001
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||  |||||||||| |||||| ||||||| |||||||||||||| |||||| |||||| ||| ||||||||||    
T  38903924 aatctacaagtcttctctccacatgctcaaaccaactaagccgagtttccaccatcttttctatgatcggtgctaccc 38904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 690
Target Start/End: Complemental strand, 41192921 - 41192836
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||| ||||||||| ||||||||||| |||||| |||| |||||||| | |||||| |||||| |||||||  |||||||||||||    
T  41192921 actacagaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctacccc 41192836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 51252674 - 51252743
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| ||||||||| |||||||||||| |||||| |||||| ||||||| | ||||||||||||    
T  51252674 gtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctacccc 51252743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 54470276 - 54470207
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| ||||||||||||||| |||| | |||||| |||||| ||||||| ||||||||||||||    
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctacccc 54470207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 56375367 - 56375290
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||| |||||||||||||| |||||||   ||||||||| | ||||||  ||||||||||||||    
T  56375367 atctacgggtcttctctctacatgcccaaaccatctaagcctgttttctaccaacttttctattataggtgctacccc 56375290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 44047550 - 44047630
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| ||||||  ||| ||||| |||||||||||||||| || |||||||| | ||||||| ||||||||||||||    
T  44047550 agaatctacaggtcttaactctacatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctacccc 44047630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 621 - 685
Target Start/End: Original strand, 46715585 - 46715649
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgct 685  Q
    |||||||||| ||||||||| |||||||||||| |||||| |||||| ||||||| |||||||||    
T  46715585 gtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 621 - 692
Target Start/End: Complemental strand, 28236252 - 28236181
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||| |||||||||||||| ||||||| | |||| |||| | ||||||| ||||||||||||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctaccccca 28236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 690
Target Start/End: Complemental strand, 33710011 - 33709924
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| |||||| || | ||||||||| ||||||| ||||||||||| || |||||| |||||| ||||||| ||||||| ||||||    
T  33710011 ttactacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttacccc 33709924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 605 - 680
Target Start/End: Original strand, 42285897 - 42285972
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatag 680  Q
    |||| |||||| || ||||||||||  |||||||||||||||||||| | ||||||||||||| ||||||| ||||    
T  42285897 actacagaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 605 - 686
Target Start/End: Complemental strand, 29398903 - 29398822
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 686  Q
    |||| ||||||||  ||||||||||| ||||||||||||||| |||||  | |||| |||||| ||||||| ||||||||||    
T  29398903 actacagaatctataggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 620 - 681
Target Start/End: Original strand, 45094372 - 45094433
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgatagg 681  Q
    ||||||| ||| ||||||||||||||||||||||||||||  |||||| |||||| ||||||    
T  45094372 ggtcttccctctacatgcccaaaccacctaagccgagttttcaccatcctttctatgatagg 45094433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 611 - 687
Target Start/End: Original strand, 42293452 - 42293528
Alignment:
Q  611 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    ||||||||  ||| ||| || |||| |||||||||||||||||||||||| | |||| ||||||| |||||||||||    
T  42293452 gaatctacatgtcgtctttctacatacccaaaccacctaagccgagtttccatcatcttttctactataggtgctac 42293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 689
Target Start/End: Original strand, 42639233 - 42639301
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||| ||||| ||||||||||||||||  ||||| |||||| ||||||| |||||||| ||||    
T  42639233 gtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgcaaccc 42639301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 20192110 - 20192031
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||| | ||||||  | |||||| || | ||||||| ||| ||||||||||||    
T  20192110 atctacgggtcttctctctacatgcccaaactatctaagcttattttctatcaacttttctactataagtgctaccccca 20192031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 621 - 692
Target Start/End: Original strand, 23906508 - 23906579
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||| |||||| ||||||| ||||||| | ||||||| | | ||||||| ||||||||||||||||    
T  23906508 gtcttctctctacatgctcaaaccatctaagcctattttctacaaacttttctactataggtgctaccccca 23906579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 688
Target Start/End: Complemental strand, 37797929 - 37797854
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||||||  ||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  37797929 atctacgaatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 37797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 38903793 - 38903875
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    |||||||||||||||| || |||||||| | |||  | |||||||| |||| |||||||||||| |||||||| ||||||||||    
T  38903793 atatcatatctctatcaaactcattaatctttaggtctttcttaatagtttctcttatagtttt-ctaggtcttcatctgcctc 38903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 601 - 683
Target Start/End: Complemental strand, 50662477 - 50662394
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaa-ccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||| | |||||||||  |||||||||| ||||||||||| ||||||||||| | |||| |||||| ||||||| |||||||    
T  50662477 ccttacaatagaatctacaagtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtg 50662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 17900550 - 17900480
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| || |||||||||||| | || | |||||||||| || ||||||| ||||||||||||||    
T  17900550 ggtcttctctctacgtgcccaaaccacatgagtctagtttctaccgtcttttctactataggtgctacccc 17900480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 690
Target Start/End: Original strand, 31897625 - 31897708
Alignment:
Q  605 actagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||| |||||| || ||||| ||||| |||||| ||||||||| ||| | ||||||||||||| |||||||  |||||||||||||    
T  31897625 actacagaatccacaggtctgctctctacatgcgcaaaccacccaagtctagtttctaccatcttttctac--taggtgctacccc 31897708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 616 - 690
Target Start/End: Original strand, 37773659 - 37773733
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| ||| || |||||||||||||| ||||||| | ||||||||  | ||||||| ||||||||||||||    
T  37773659 tacgggtcgtctatctacatgcccaaaccatctaagcctattttctaccgacttttctactataggtgctacccc 37773733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 50471596 - 50471526
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| ||||||||||||||| ||| || |||||| |||||| ||||||| ||  ||||||||||    
T  50471596 ggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctactattagtgctacccc 50471526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 674
Target Start/End: Original strand, 21879346 - 21879419
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    |||||||| |||||||||  |||||||||   |||| |||||| |||||||||||||||| |||||| ||||||    
T  21879346 ccttactaaagaatctacatgtcttctctatgcatgtccaaactacctaagccgagtttccaccatcttttcta 21879419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 28497578 - 28497490
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | |||||||  |||||||||| ||||||||||||||||||||||   |||| || ||| ||||||| | ||||||||||||    
T  28497578 ccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcc-tttttccacaatcttttctactaaaggtgctacccc 28497490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 31339625 - 31339537
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | |||||||  |||||||||| |||||| ||||||||||||||  |||||| |||||  ||||||| |||||| |||||||    
T  31339625 ccttactacataatctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat-ttttctaccataggttctacccc 31339537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 38570960 - 38571029
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| || |||||||||||||||||||||| |||||| || ||| ||| ||| ||||||||| ||||    
T  38570960 gtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgcttcccc 38571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 44360155 - 44360087
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| |||||||||||| |||||| |  ||||||||||||| ||||||| ||||||| ||||||    
T  44360155 gtcttctctctacatgcccaaacaacctaatct-agtttctaccatcttttctactataggtgatacccc 44360087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 46372093 - 46372024
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| |||||| ||||||||||||| | ||||||||| ||  |||| || ||||||||||||||    
T  46372093 gtcttctctctacatgcacaaaccacctaagtctagtttctacaatattttcgactataggtgctacccc 46372024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 682
Target Start/End: Complemental strand, 50287039 - 50286970
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 682  Q
    |||||||||||||||||| |||||||||||||| | ||| | | ||||||||| | ||||||| ||||||    
T  50287039 atctacgggtcttctctctacatgcccaaaccatccaagtctattttctaccaacttttctactataggt 50286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 665
Target Start/End: Complemental strand, 8286508 - 8286456
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctacca 665  Q
    |||||||||||||||||| ||||||| |||||| ||||||| | |||||||||    
T  8286508 atctacgggtcttctctctacatgcctaaaccatctaagcctattttctacca 8286456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 598
Target Start/End: Complemental strand, 37488276 - 37488216
Alignment:
Q  538 attaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcct 598  Q
    |||||| |||||| | |||||||| |||| |||||||||||| |||||||||| |||||||    
T  37488276 attaatttctagatctttcttaatagtttctcttatagtttttctaggtctacctctgcct 37488216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 588
Target Start/End: Original strand, 40018264 - 40018336
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||||||||| |||||||| ||||| || |||||| | |||||||  ||||||||||||||||| ||| ||||    
T  40018264 atatcatatccctatccaactcattgatctctagatctttcttaacagtttttcttatagtttttctaagtct 40018336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 667
Target Start/End: Original strand, 40268466 - 40268522
Alignment:
Q  611 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatc 667  Q
    |||||||| ||||||||||| |||||||||| ||||| |||||||||| | ||||||    
T  40268466 gaatctacaggtcttctctctacatgcccaagccaccaaagccgagttcccaccatc 40268522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 692
Target Start/End: Original strand, 20591513 - 20591584
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||| |||||||||||||| |||| |  | ||||||||| | ||||||| ||| ||||||||||||    
T  20591513 gtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgctaccccca 20591584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 660
Target Start/End: Complemental strand, 30853426 - 30853387
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttc 660  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  30853426 gtcttctctctacatgcccaaaccacctaagctgagtttc 30853387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 39100740 - 39100819
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||| ||||||||| |||||  ||||||| ||||||| | |||||| || | ||||| | ||||||||||||||||    
T  39100740 atctacggatcttctctctacatgttcaaaccatctaagcctattttctatcaacttttcttctataggtgctaccccca 39100819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 675
Target Start/End: Complemental strand, 47611797 - 47611742
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    ||||||||||| |||||||||||||||||||||| | |||| | |||| |||||||    
T  47611797 ggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 934648 - 934717
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| ||||| || |||||||||||||||||  |||||||||||||| |||| | |||||||| ||||||    
T  934648 ggtctcctctctacttgcccaaaccacctaagatgagtttctaccatcttttc-atgataggtgatacccc 934717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 691
Target Start/End: Complemental strand, 1793529 - 1793459
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 691  Q
    |||||||||| ||||| |||||||| ||||||  | ||||||||| | ||| ||| |||||||||||||||    
T  1793529 gtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctaccccc 1793459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 690
Target Start/End: Complemental strand, 2589056 - 2588991
Alignment:
Q  624 ttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| ||||||| |||||||||||| | ||||||||||||| |||| || |||||| |||||||    
T  2589056 ttctctctacatgcctaaaccacctaagtctagtttctaccatcttttc-actataggtactacccc 2588991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 10209104 - 10209034
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| | |||||||||||||| |||||   ||||||| ||||| ||||||| |||||| |||||||    
T  10209104 ggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctacccc 10209034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 588
Target Start/End: Complemental strand, 10209229 - 10209171
Alignment:
Q  530 tccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    ||||| |||||||| |||||| | |||||||| |||| |||||||||||| ||||||||    
T  10209229 tccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 663
Target Start/End: Original strand, 21214793 - 21214835
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctac 663  Q
    |||||||||| ||||||||||||||||||||| |||| |||||    
T  21214793 gtcttctctctacatgcccaaaccacctaagcagagtctctac 21214835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 683
Target Start/End: Complemental strand, 26356688 - 26356626
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||||| |  ||||||||||||||||| | | ||||||||||| ||||||| |||||||    
T  26356688 gtcttctctctaagtgcccaaaccacctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 599
Target Start/End: Original strand, 45569085 - 45569167
Alignment:
Q  517 tatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    |||||||||||||||||| ||||| || ||||||   |||||||| |||| ||||||| | || |||||||| | ||||||||    
T  45569085 tatcatatctctatccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctc 45569167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 29182571 - 29182498
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    |||||| | ||||||||| ||| ||||||| ||||||| |||||||||||||  ||||| || |||| ||||||    
T  29182571 ccttaccacagaatctaccggttttctctctacatgcctaaaccacctaagcttagtttgtagcatcttttcta 29182498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 653
Target Start/End: Complemental strand, 45176084 - 45176043
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagcc 653  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  45176084 aatctacaagtcttctctctacatgcccaaaccacctaagcc 45176043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 692
Target Start/End: Original strand, 47265409 - 47265486
Alignment:
Q  615 ctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||| |||||||||| ||||||||||| || |||| || | ||||||| | | ||||||| ||||||| ||||||||    
T  47265409 ctacgtgtcttctctctacatgcccaaatcatctaaacctattttctactaccttttctactataggtgttaccccca 47265486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 598
Target Start/End: Complemental strand, 50680934 - 50680865
Alignment:
Q  529 atccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcct 598  Q
    |||||| |||||||| |||||| | |||| |||  ||| |||||||||||| |||||||||| |||||||    
T  50680934 atccaactcattaatctctagatctttctaaataatttctcttatagtttttctaggtctacctctgcct 50680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 51421807 - 51421730
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| ||||||||||  | |||||||||||||||||||| | |||||| ||||   ||||| ||| ||||||||||    
T  51421807 atctaccggtcttctctgtatatgcccaaaccacctaagcctattttctatcatctaatctactatatgtgctacccc 51421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 8e-20; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 50960845 - 50960915
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  50960845 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacccc 50960915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 54128455 - 54128378
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| |||||| |||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  54128455 atctacaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacccc 54128378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 620 - 688
Target Start/End: Original strand, 49503766 - 49503834
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 49503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 52138877 - 52138798
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| ||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  52138877 atctacaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 52138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 22149 - 22071
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  22149 atctacgggtcttctctctacatgtccaaaccatctaagccta-tttctaccaacttttctactataggtgctaccccca 22071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 28245514 - 28245435
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||| ||||||| |||||||||||||| ||||| | | ||||||||| | ||||||| ||||||||||||||||    
T  28245514 atctacgggttttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactataggtgctaccccca 28245435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 35033223 - 35033144
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| ||||||||  |||||| | ||||||||| | ||||||| ||||||||||||||||    
T  35033223 atctacgggtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgctaccccca 35033144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 688
Target Start/End: Original strand, 47233801 - 47233876
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||    
T  47233801 atctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacc 47233876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 612 - 690
Target Start/End: Complemental strand, 3987125 - 3987047
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||  |||||||||| |||| ||||||||||||||| | ||||||||||||| ||||||| ||||||| ||||||    
T  3987125 aatctaccagtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtgatacccc 3987047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 21200637 - 21200550
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||  |||||||||  |||||||||| |||||||||||||||||||| | |||||| |||||| |||||||  |||||||||||||    
T  21200637 ccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac--taggtgctacccc 21200550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 41842706 - 41842792
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||| ||||||||| | ||||||||| |||| ||||||||||||||| |  ||||| |||||| ||||||| |||||||||||||    
T  41842706 ttactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgctaccc 41842792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 613 - 691
Target Start/End: Original strand, 43694970 - 43695048
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 691  Q
    |||||| ||||||||||| |||||||||||||| ||||||  | ||||||||| | ||||||| |||||||||||||||    
T  43694970 atctacaggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtgctaccccc 43695048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 674
Target Start/End: Complemental strand, 39235215 - 39235154
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    |||||| ||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||    
T  39235215 atctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 39535642 - 39535715
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    ||||||||  ||||||||||| || |||| ||||||||||||||| |||||||||||| ||||||| |||||||    
T  39535642 agaatctataggtcttctctctacttgcctaaaccacctaagccgggtttctaccatcttttctactataggtg 39535715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 54279097 - 54279020
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||| || ||||||||||  ||||||| | ||||||||| | ||||||| ||||||||||||||    
T  54279097 atctacgggtcttctctctacgtgcccaaaccgtctaagcctattttctaccaacttttctactataggtgctacccc 54279020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 693
Target Start/End: Complemental strand, 19737074 - 19736994
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaa 693  Q
    |||||| |||||||||||  ||||| |||||||||||| || | ||||||||||| ||||||| ||||||||| |||||||    
T  19737074 atctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgcccccaa 19736994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 693
Target Start/End: Complemental strand, 19757977 - 19757897
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaa 693  Q
    |||||| |||||||||||  ||||| |||||||||||| || | ||||||||||| ||||||| ||||||||| |||||||    
T  19757977 atctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgcccccaa 19757897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 613 - 689
Target Start/End: Original strand, 51447915 - 51447991
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||| ||||||||| |||||||||||| | ||||||| | ||||||||| | ||||||| |||||||||||||    
T  51447915 atctacggatcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctaccc 51447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 5168909 - 5168830
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||  ||||||| ||||||  | ||||||||| | ||||||| ||||||||||||||||    
T  5168909 atctacgggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctaccccca 5168830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 38060508 - 38060429
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| ||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||  ||||||||||||||||    
T  38060508 atctacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccccca 38060429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 690
Target Start/End: Original strand, 19676276 - 19676362
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| || |||||| ||||||||||| ||||||| | |||||||||||| | |||||| |||| ||| ||| ||||||||||||||    
T  19676276 tactacagcatctacaggtcttctctctacatgccaataccacctaagccaattttctatcatcttttgtactataggtgctacccc 19676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 683
Target Start/End: Complemental strand, 29375023 - 29374941
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||| | ||||||| |||||| |||| ||| ||||||| |||||||| ||||||||||||||| ||||| | |||||||    
T  29375023 ccttactacaaaatctacaggtcttttctctacaagcccaaatcacctaagtcgagtttctaccatcttttctccaataggtg 29374941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 622 - 679
Target Start/End: Original strand, 31261155 - 31261212
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgata 679  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| ||||| |||||    
T  31261155 tcttctctcaacatgcccaaaccatctaagctgagtttctatcatcttttcttcgata 31261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 690
Target Start/End: Original strand, 36820154 - 36820243
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | |||||| |||||||||||  ||||| | |||||||||||||| |||||| |||||| || |||  ||||||||||||||    
T  36820154 ccttactacataatctatgggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctacccc 36820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 688
Target Start/End: Complemental strand, 26490373 - 26490317
Alignment:
Q  632 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||| |||||||||||||||| | ||||||||||| ||||||| ||||||||||||    
T  26490373 acatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacc 26490317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 620 - 688
Target Start/End: Complemental strand, 38430918 - 38430850
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    |||| |||||| |||||||||| | ||||||||| | ||||||||||| ||||||| ||||||||||||    
T  38430918 ggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgctacc 38430850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 690
Target Start/End: Original strand, 48734349 - 48734417
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||  |||||| ||| | ||||||||    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactatacgcgctacccc 48734417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 25191454 - 25191375
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||| | | ||||| |||   ||||||| ||||||||||||||||    
T  25191454 atctacgggtcttctctctacatgtccaaaccatctaagtctattttcttccaatttttctactataggtgctaccccca 25191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 517 - 588
Target Start/End: Complemental strand, 40982102 - 40982031
Alignment:
Q  517 tatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||||||| |||||||||  |||||||||||||| | |||||||| |||  |||||||||||| ||||||||    
T  40982102 tatcatatatctatccaacacattaatatctagatctttcttaatagttactcttatagtttttctaggtct 40982031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 687
Target Start/End: Complemental strand, 659613 - 659528
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    ||||||| |||||||||   | ||||||| |||||||||||||||||||||  ||||||||| ||| |||||| ||| || |||||    
T  659613 cttactacagaatctacaaattttctctctacatgcccaaaccacctaagctaagtttctactatcttttctatgattggagctac 659528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 674
Target Start/End: Complemental strand, 11581513 - 11581460
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    |||||||||| |||| ||||||||||||||| | ||||||||||||| ||||||    
T  11581513 gtcttctctctacatacccaaaccacctaagtctagtttctaccatcttttcta 11581460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 21200756 - 21200683
Alignment:
Q  515 aatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||| ||||| ||||||||| ||||||||||||||| | |||| ||| |||| ||| |||||||| ||||||||    
T  21200756 aataccatatttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtct 21200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 690
Target Start/End: Complemental strand, 27917639 - 27917570
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| || ||||| |||||||| ||||||| | || |||||||| ||||||| ||||||||||||||    
T  27917639 gtcttctttctacatgtccaaaccatctaagcctatttcctaccatcttttctactataggtgctacccc 27917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 536 - 588
Target Start/End: Original strand, 2340812 - 2340864
Alignment:
Q  536 tcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    |||||||| |||||| | |||||||| |||| |||||||||||||||||||||    
T  2340812 tcattaatctctagatctttcttaatagtttctcttatagttttcctaggtct 2340864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 633 - 689
Target Start/End: Original strand, 31337751 - 31337807
Alignment:
Q  633 catgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    ||||| |||||||| |||||| |||||| |||||| ||||||| |||||||||||||    
T  31337751 catgctcaaaccacttaagcctagtttcaaccatcttttctactataggtgctaccc 31337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 686
Target Start/End: Original strand, 31454441 - 31454504
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 686  Q
    ||||||||| |||||| ||||||||| ||| | ||||||||||||| ||||||| ||||||||||    
T  31454441 tcttctctctacatgcacaaaccacc-aagtctagtttctaccatcttttctactataggtgcta 31454504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 39600883 - 39600963
Alignment:
Q  610 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||| ||||||||||  ||||||| |||||||||||||    |||| |||||| ||||||| |||||| |||||||    
T  39600883 agaatctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactacccc 39600963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 588
Target Start/End: Complemental strand, 43308769 - 43308697
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    ||||||||||||||||||| | |||||| ||||||   |||||||| |||| |||| ||||||| ||||||||    
T  43308769 atatcatatctctatccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtct 43308697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 584
Target Start/End: Original strand, 46431754 - 46431822
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctag 584  Q
    |||| |||||||||||||| |||||||| |||||| | || ||||| |||| |||||||||||| ||||    
T  46431754 atataatatctctatccaactcattaatctctagatcttttttaatagtttctcttatagtttttctag 46431822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 660
Target Start/End: Original strand, 46431868 - 46431925
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttc 660  Q
    |||||||| ||||||||| | || |||||  |||||||||||||||||||||||||||||    
T  46431868 ccttactacagaatctacagatcctctct--acatgcccaaaccacctaagccgagtttc 46431925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 653
Target Start/End: Complemental strand, 48508312 - 48508272
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagcc 653  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  48508312 atctacgggtcttctctctacatgcccaaaccatctaagcc 48508272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 690
Target Start/End: Original strand, 45289285 - 45289375
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac--gataggtgctacccc 690  Q
    ||||||| | |||||||  || ||||||| || ||||||||||||||||||| | |||| |||||| |||||||   ||||||||||||||    
T  45289285 cttactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctactgaataggtgctacccc 45289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 603 - 689
Target Start/End: Complemental strand, 31209065 - 31208979
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||| |||||||||  | ||||||||  | | |||||||||||||| | ||||||  | |||| |||||||||||||||||||||    
T  31209065 ttactacagaatctacaaggcttctctcctcgttcccaaaccacctaaactgagttttcagcatcttttctacgataggtgctaccc 31208979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 31453151 - 31453221
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttc-tacgataggtgctacccc 690  Q
    |||||||||| ||||||| |||| ||||||| | ||||||||||||| |||| ||| ||||||||| ||||    
T  31453151 gtcttctctctacatgccaaaacaacctaagtctagtttctaccatcttttcttactataggtgctgcccc 31453221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 675
Target Start/End: Original strand, 33272235 - 33272289
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||| | |||||||    
T  33272235 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctac 33272289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 675
Target Start/End: Complemental strand, 36304067 - 36303994
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    |||||||| || |||||| ||||||||||| |||||||||| ||| |||| || |||||| |||||| |||||||    
T  36304067 ccttactaaagcatctacaggtcttctctctacatgcccaacccatctaa-cctagtttccaccatcttttctac 36303994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 683
Target Start/End: Original strand, 44443397 - 44443479
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||| ||||||||   |||||||||| |||||  ||||| || ||||||||||||| |||||| |||||| | ||||||    
T  44443397 ccttactacagaatctaaaagtcttctctctacatgtgcaaactacttaagccgagtttccaccatcttttctatggtaggtg 44443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 621 - 687
Target Start/End: Complemental strand, 49841688 - 49841622
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||||| ||| ||||||||||||| || | |||||| |||||| ||||||  |||||||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctac 49841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 50249476 - 50249384
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaac---cacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| |||||||||  |||||| ||| ||||||||||||   |||||||| | |||||| |||||| ||||||| ||| | ||||||||    
T  50249476 ccttactaaagaatctacatgtcttcactctacatgcccaaaccaccacctaagtctagtttccaccatcttttctactatacgcgctacccc 50249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 690
Target Start/End: Original strand, 34719265 - 34719354
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | |||| || || |||||||| | |||  |||| ||||||||  || |||| |||||| ||||||||||||||||||||||    
T  34719265 ccttactacaaaatcaacaggccttctctctatatgttcaaaacacctaagttgactttccaccatcttttctacgataggtgctacccc 34719354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 634 - 687
Target Start/End: Original strand, 36868450 - 36868503
Alignment:
Q  634 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    |||||||||||||||||||| | |||| |||||| | ||||| |||||||||||    
T  36868450 atgcccaaaccacctaagcctactttccaccatcttctctaccataggtgctac 36868503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 687
Target Start/End: Complemental strand, 38850188 - 38850123
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 687  Q
    ||||||||| |||||||||||||| ||||| | | ||||||||| | ||||||| ||| |||||||    
T  38850188 tcttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactatatgtgctac 38850123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 673
Target Start/End: Complemental strand, 40981975 - 40981914
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttct 673  Q
    ||||| || ||||||||||||||||||||||  |||||||  ||||||| |||||| |||||    
T  40981975 aatctccgtgtcttctctcaacatgcccaaagtacctaagttgagtttccaccatcttttct 40981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 585
Target Start/End: Original strand, 44443279 - 44443348
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctagg 585  Q
    |||||||||| |||||||| |||| ||| |||||| | |||||||  |||| |||||||||||| |||||    
T  44443279 atatcatatccctatccaactcatcaatctctagatcattcttaaaagtttctcttatagtttttctagg 44443348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 611 - 692
Target Start/End: Original strand, 5258351 - 5258432
Alignment:
Q  611 gaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  5258351 gaatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 5258432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 620 - 690
Target Start/End: Complemental strand, 33084128 - 33084058
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| |||| ||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  33084128 ggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctacccc 33084058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 602 - 690
Target Start/End: Original strand, 9593900 - 9593988
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| || ||||||  |||||||||| |||||||||||||||||||||| | ||||||||||| ||||||| |  |||||||||||    
T  9593900 cttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctacccc 9593988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 634 - 690
Target Start/End: Original strand, 21870299 - 21870355
Alignment:
Q  634 atgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  21870299 atgcccaaaccacctaagccgagtttctaccatcttttctactacaggtgctacccc 21870355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 692
Target Start/End: Complemental strand, 28085450 - 28085374
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  28085450 tacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 28085374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 5631899 - 5631820
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| ||||| |||||||| ||||||  | ||||||||| | ||||||| ||||||| ||||||||    
T  5631899 atctacgggtcttctctctacatgtccaaaccatctaagcatattttctaccaacttttctactataggtgttaccccca 5631820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 32755998 - 32755919
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||| ||||||||| ||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  32755998 atcttcgggtcttccctctacatgaccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 32755919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 612 - 682
Target Start/End: Complemental strand, 24665888 - 24665818
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 682  Q
    ||||||| ||||||||||| ||||| |||||||||||||||| | ||||||||||  ||||||| ||||||    
T  24665888 aatctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 20427841 - 20427920
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||  ||| |  ||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  20427841 atctacgggtcttctctatacacgttcaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 20427920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 30031333 - 30031254
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||| |||||||||||| ||||| ||||  || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  30031333 atctatgggtcttctctctacatgtccaactcatctaagcctattttctaccaacttttctactataggtgctaccccca 30031254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 599
Target Start/End: Original strand, 33997623 - 33997702
Alignment:
Q  520 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    ||||| ||||||||| |||||||| ||||| |  |||||||| |||| |||||||||||||| |||||| | ||||||||    
T  33997623 catatttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttcctctgcctc 33997702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 666
Target Start/End: Original strand, 7150514 - 7150579
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 666  Q
    |||||||| | |||||||  ||||||||||  |||||||||||||||||| ||||||||| |||||    
T  7150514 ccttactatataatctacaagtcttctctccccatgcccaaaccacctaatccgagtttccaccat 7150579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 689
Target Start/End: Complemental strand, 608234 - 608158
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||| ||||||||||| ||||| |||||||| ||||||| | |||||| || | ||||||| ||||||| |||||    
T  608234 atctacaggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttttctactataggtgataccc 608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 692
Target Start/End: Complemental strand, 12890642 - 12890582
Alignment:
Q  632 acatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||  |||||| | ||||||||| | ||||||| ||||||||||||||||    
T  12890642 acatgcccaaaccatgtaagcctattttctaccaacttttctactataggtgctaccccca 12890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 599
Target Start/End: Original strand, 34584 - 34663
Alignment:
Q  520 catatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    ||||| || |||||| |||||||| | |||| | |||||||| |||| |||||||||||| |||||||| | ||||||||    
T  34584 catatttcaatccaactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttcctctgcctc 34663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 1747716 - 1747799
Alignment:
Q  516 atatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtctacatctgcctc 599  Q
    ||||||||||| ||||||| |||||||| |||||| | ||||||   |||| |||||| ||||| |||||||| | ||||||||    
T  1747716 atatcatatctttatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctc 1747799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 683
Target Start/End: Original strand, 4948539 - 4948586
Alignment:
Q  636 gcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||||||||||||||| |||| |||||| |||||||||| ||||    
T  4948539 gcccaaaccacctaagccgaatttccaccatcttttctacgatgggtg 4948586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 683
Target Start/End: Original strand, 4955510 - 4955557
Alignment:
Q  636 gcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||||||||||||||| |||| |||||| |||||||||| ||||    
T  4955510 gcccaaaccacctaagccgaatttccaccatcttttctacgatgggtg 4955557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 675
Target Start/End: Complemental strand, 30679483 - 30679421
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    |||||||||||| ||||| ||||||||||| || ||||||| | ||||||||| | |||||||    
T  30679483 atctacgggtctcctctctacatgcccaaatcatctaagcctattttctaccaacttttctac 30679421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 12141633 - 12141544
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||| |||||||| || || |||||||||||||||||||   |||| |||||| ||||||| ||||||||||||||    
T  12141633 ccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctacccc 12141544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 612 - 688
Target Start/End: Complemental strand, 11017392 - 11017316
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacc 688  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||| || ||| ||||||| ||||||||||||    
T  11017392 aatctacgggtcttctctccacatacccaaaccacttaagccgagtttccacgatcttttctactataggtgctacc 11017316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 38452890 - 38452969
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||| |||| |||||||||||    
T  38452890 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctaccccca 38452969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 601 - 674
Target Start/End: Original strand, 13240938 - 13241011
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttcta 674  Q
    |||||||| |||||||||  |||||||||| |||||||||||||||||||||| |||||| |||||| ||||||    
T  13240938 ccttactaaagaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 2610665 - 2610586
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | ||||||||| | |||| || ||||||||||||||||    
T  2610665 atctacgtgtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctaccccca 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 3866149 - 3866070
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||||| ||||||| ||||||| | ||||||||| | ||| ||| ||||||||||||||||    
T  3866149 atctacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactataggtgctaccccca 3866070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 620 - 692
Target Start/End: Complemental strand, 8180850 - 8180778
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||| |||||||||||||| ||||||  | ||||||||| | ||||||| ||||||||||||||||    
T  8180850 ggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctaccccca 8180778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 19235055 - 19235131
Alignment:
Q  512 tcaaatatcatatctctatccaaatcattaatatctagaccgttcttaatcgtttttcttatagttttcctaggtct 588  Q
    ||||||| ||||| |||||||||||||||||| |||||| | |||| ||| |||| |||||||||||| ||||||||    
T  19235055 tcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtct 19235131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 620 - 692
Target Start/End: Complemental strand, 25834751 - 25834679
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  25834751 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 25834679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 620 - 692
Target Start/End: Original strand, 43238305 - 43238377
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||  |||||||||||||| ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccccca 43238377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 12734776 - 12734697
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||  ||||| |||||||| ||||||| | |||||||||   ||||||| ||||||||||||||||    
T  12734776 atctacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctaccccca 12734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 682
Target Start/End: Original strand, 9647805 - 9647883
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggt 682  Q
    ||||||||||||||| |||||||| |  ||||| |||||||||||||  | |||||| |||||||||||||| ||||||    
T  9647805 tactagagaatctacaggtcttctttttacatgtccaaaccacctaaagctagtttccaccatcatttctactataggt 9647883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 613 - 683
Target Start/End: Original strand, 24583837 - 24583907
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtg 683  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||||||| | ||||||  |||||||    
T  24583837 atctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtg 24583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 43752159 - 43752229
Alignment:
Q  620 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||| ||||| ||||| |||||||||| | ||||||||| | ||||||| ||||||||||||||    
T  43752159 ggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctacccc 43752229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 613 - 691
Target Start/End: Original strand, 45367830 - 45367908
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccc 691  Q
    |||||||||||||||||| ||||| |||||||| |||||   | ||||||||| | ||||||| |||||||||||||||    
T  45367830 atctacgggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctaccccc 45367908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 36183528 - 36183451
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||||| ||||||| |||||| |||||   | ||||||||| | ||||||| ||||||||||||||    
T  36183528 atctacgggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctacccc 36183451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 613 - 690
Target Start/End: Original strand, 41763247 - 41763324
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||| |||||||||||  |||| |||||||||||||||| | ||||||||| | ||||||| ||||||| ||||||    
T  41763247 atctacaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgttacccc 41763324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 689
Target Start/End: Original strand, 11992313 - 11992389
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||||||||||| | ||| |||||||| ||||||  | ||||||||| | ||||||| |||||||||||||    
T  11992313 atctacgggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactataggtgctaccc 11992389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 607 - 682
Target Start/End: Original strand, 14197361 - 14197437
Alignment:
Q  607 tagagaatctacgggtcttctctcaacatgcccaaaccacct-aagccgagtttctaccatcatttctacgataggt 682  Q
    ||||||||||||  |||||| ||| ||||||||||||||||| ||||| |||||| |||||| ||||||| ||||||    
T  14197361 tagagaatctacaagtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 692
Target Start/End: Complemental strand, 38429958 - 38429882
Alignment:
Q  616 tacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||||||  ||||| |||||||| ||||||| | ||||||||| | ||||||| ||||||||| ||||||    
T  38429958 tacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctgccccca 38429882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 689
Target Start/End: Original strand, 41197433 - 41197509
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||| ||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||  |||||||||||||    
T  41197433 atctacggatcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccc 41197509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 675
Target Start/End: Complemental strand, 41858818 - 41858746
Alignment:
Q  603 ttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctac 675  Q
    ||||||||||| ||||  |||||||||| ||||| |||||||| ||||||| |||||| |||||| |||||||    
T  41858818 ttactagagaacctacatgtcttctctctacatgtccaaaccatctaagcccagtttccaccatcttttctac 41858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 693
Target Start/End: Original strand, 44437934 - 44438006
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccaa 693  Q
    |||||||||| ||||||| |||||||||| | | ||||||||||||| ||||||| ||||| | |||||||||    
T  44437934 gtcttctctctacatgccgaaaccacctatgtctagtttctaccatcttttctactataggggttacccccaa 44438006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 638 - 689
Target Start/End: Complemental strand, 1456282 - 1456231
Alignment:
Q  638 ccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||| |||||||||||||||| |||||| |||||| ||||||||||||||    
T  1456282 ccaaactacctaagccgagtttccaccatcttttctaggataggtgctaccc 1456231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 3243858 - 3243937
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||||||||||||||| |||| ||||||||| ||||||| | |||| | || | ||| ||| ||||||||||||||||    
T  3243858 atctacgggtcttctctctacattcccaaaccatctaagcctattttccatcaacttttttactataggtgctaccccca 3243937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 18424582 - 18424661
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||||||| |||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| |||| |||||| ||||    
T  18424582 atctacgggtcgtctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagatgctacaccca 18424661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 690
Target Start/End: Complemental strand, 11412807 - 11412721
Alignment:
Q  604 tactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||| ||||||||| | |||| |||| | |||||||||| ||||||||| | |||| |||||  ||||||| ||||||||||||||    
T  11412807 tactacagaatctacagttcttatctctaaatgcccaaacaacctaagcctattttccaccatattttctactataggtgctacccc 11412721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 692
Target Start/End: Original strand, 16097192 - 16097270
Alignment:
Q  614 tctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||| ||||||||||| ||||| ||||| || ||||||| | ||||||||| | ||||||  ||||||||||||||||    
T  16097192 tctacaggtcttctctctacatgtccaaatcatctaagcctattttctaccaacttttctattataggtgctaccccca 16097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 38435041 - 38434951
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaa-gccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| || ||||||  |||||||||  |||||||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||    
T  38435041 ccttactaaagcatctacaagtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctacccc 38434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 665
Target Start/End: Original strand, 451853 - 451905
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctacca 665  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | |||||||||    
T  451853 atctacgggtcttttctctacatgcccaaaccatctaagcctattttctacca 451905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 666
Target Start/End: Original strand, 9556563 - 9556627
Alignment:
Q  602 cttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 666  Q
    ||||||| |||||||||  |||||||||| ||||||| |||||||||||||| | |||| |||||    
T  9556563 cttactacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccat 9556627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 690
Target Start/End: Complemental strand, 18188848 - 18188780
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||  |||||||||||||||||||| |||| ||| |||||| ||||||  | ||||||||||||    
T  18188848 tcttctctttacatgcccaaaccacctaagtcgagcttccaccatcttttctagaagaggtgctacccc 18188780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 638 - 690
Target Start/End: Complemental strand, 18958959 - 18958907
Alignment:
Q  638 ccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||||||||| | |||| |||||| ||||||| ||||||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctacccc 18958907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 4807672 - 4807594
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||||| |||||||||| | ||||| |||| | ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  4807672 atctacgagtcttctctctatatgccgaaactatctaagccta-tttctaccaacttttctactataggtgctaccccca 4807594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 667
Target Start/End: Original strand, 12026209 - 12026264
Alignment:
Q  612 aatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatc 667  Q
    ||||||| ||||||||||| |||||  ||||||||||||||| |||||| ||||||    
T  12026209 aatctacaggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 635 - 690
Target Start/End: Original strand, 12882267 - 12882322
Alignment:
Q  635 tgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||||||||||||||| | ||||||||||| ||||||  ||||||||| ||||    
T  12882267 tgcccaaaccacctaagcctattttctaccatcttttctagtataggtgctgcccc 12882322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 4598775 - 4598844
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    ||||||| || | ||| |||||||||| ||| | ||||||||||||| || |||| ||||||||||||||    
T  4598775 gtcttctttctatatgtccaaaccaccaaagtctagtttctaccatctttactactataggtgctacccc 4598844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 690
Target Start/End: Original strand, 37481830 - 37481899
Alignment:
Q  621 gtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||||| |||||| ||||||||||||||| || ||| |||||| ||| ||| |||||  |||||||    
T  37481830 gtcttctctctacatgctcaaaccacctaagcctaggttcaaccatcttttttactataggaactacccc 37481899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 666
Target Start/End: Complemental strand, 38264422 - 38264370
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccat 666  Q
    |||||| ||||||||||| |||| ||||||||||||||||| |||||| |||||    
T  38264422 atctacaggtcttctctctacat-cccaaaccacctaagcctagtttccaccat 38264370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 690
Target Start/End: Complemental strand, 42092606 - 42092517
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccc 690  Q
    |||||||| | |||||||  | |||||||| ||||||||| | ||||||| |  ||||||||||||| ||||||  ||||| ||||||||    
T  42092606 ccttactacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgctacccc 42092517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 658
Target Start/End: Complemental strand, 43260493 - 43260436
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtt 658  Q
    |||||||| |||||||||  ||||| |||  |||||||||||||||||||||| ||||    
T  43260493 ccttactatagaatctacaagtcttttcttcacatgcccaaaccacctaagcctagtt 43260436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 622 - 686
Target Start/End: Complemental strand, 11866 - 11802
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgcta 686  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  11866 tcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgcta 11802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 613 - 689
Target Start/End: Original strand, 1153 - 1229
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccc 689  Q
    |||||||||||||||||| ||||| |||||||| ||||||| | ||||||||| | ||||||| |||||||||||||    
T  1153 atctacgggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 692
Target Start/End: Original strand, 11810 - 11880
Alignment:
Q  622 tcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    |||||| || ||||||||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  11810 tcttctgtctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctaccccca 11880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 692
Target Start/End: Complemental strand, 82798 - 82719
Alignment:
Q  613 atctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctaccccca 692  Q
    ||||| || ||||||||| | ||| ||||| || ||||||| | ||||||||| | ||||||| ||||||||||||||||    
T  82798 atctatggatcttctctctatatgtccaaatcatctaagcccattttctaccaacttttctactataggtgctaccccca 82719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 654
Target Start/End: Original strand, 346966 - 347019
Alignment:
Q  601 ccttactagagaatctacgggtcttctctcaacatgcccaaaccacctaagccg 654  Q
    |||||||| ||||||||  ||| ||||||| |||| ||||||||||||||||||    
T  346966 ccttactacagaatctataggttttctctctacatacccaaaccacctaagccg 347019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University