View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17797_high_37 (Length: 238)
Name: NF17797_high_37
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17797_high_37 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 6350081 - 6349844
Alignment:
| Q |
1 |
aattaaatcacattaacaccaaaatctatatatttgacataactaaggttgataagatatttgacatataaatagttaaaattgtctgaagatcataaaa |
100 |
Q |
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| T |
6350081 |
aattaaatcacattaacaccaaaatctatatatttgacataactaaggttgataagatatttgacatataaatagttaaaattgtctgaagatcataaaa |
6349982 |
T |
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| Q |
101 |
tcataaagcatgaagatagacaagccagcaaatattgtaaatttcacagcatgttttgctatgtcactaataaatgtgcgcgtttcaagaatttaattca |
200 |
Q |
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| T |
6349981 |
tcataaagcatgaagatagacaagccagcaaatattgtaaatttcacagcatgttttgctatgtcactaataaatgtgcgcgtttcaagaatttaattca |
6349882 |
T |
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| Q |
201 |
aatatatttgatggaaggaagattaaaattttctaaca |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
6349881 |
aatatatttgatggaaggaagattaaaattttctaaca |
6349844 |
T |
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