View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17797_high_41 (Length: 208)
Name: NF17797_high_41
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17797_high_41 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18869888 - 18870086
Alignment:
| Q |
1 |
ttggtatttatatatgatgatgatttatgcagagataagcaaaagtctcctgctccagatgtctgcccttacaaaccaataggtgttgatttatttgtga |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18869888 |
ttggtatttatatatgatgataatttatgcagagataagcaaaagtctcctgctccagatgtctgcccttacaaaccaataggtgttgatttatttgtga |
18869987 |
T |
|
| Q |
101 |
gtccaaggaagataaatcacattgctaagcatattgaacttccaagtgtcggtgaacatccaaatgtaccttcacttctcattgtaaatacacaggttc |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
18869988 |
gtccaaggaagataaatcacattgctaagcatattgaacttccaagtgtcggtgaacatccaaatgtaccttcacttctcattgtaaatatacaggttc |
18870086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University