View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17797_low_12 (Length: 456)

Name: NF17797_low_12
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17797_low_12
NF17797_low_12
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-441)||(26659-27089)
[»] chr7 (33 HSPs)
chr7 (11-441)||(16437029-16437459)
chr7 (11-441)||(14926902-14927331)
chr7 (11-441)||(15350368-15350797)
chr7 (209-441)||(10280065-10280296)
chr7 (11-398)||(29545616-29545999)
chr7 (23-240)||(10280317-10280526)
chr7 (54-392)||(20991845-20992184)
chr7 (95-441)||(20924666-20925012)
chr7 (6-392)||(16207351-16207735)
chr7 (145-405)||(10661153-10661415)
chr7 (207-412)||(15506551-15506753)
chr7 (31-392)||(14165471-14165829)
chr7 (89-267)||(6045746-6045926)
chr7 (174-406)||(42636508-42636740)
chr7 (11-392)||(4459046-4459423)
chr7 (207-386)||(15438406-15438585)
chr7 (156-441)||(26132547-26132830)
chr7 (30-316)||(12326190-12326477)
chr7 (54-334)||(11520930-11521210)
chr7 (274-437)||(42783019-42783184)
chr7 (86-267)||(7586081-7586262)
chr7 (56-238)||(21260888-21261069)
chr7 (89-268)||(23082328-23082507)
chr7 (50-267)||(10038244-10038461)
chr7 (55-392)||(11588769-11589105)
chr7 (163-334)||(11999243-11999412)
chr7 (56-293)||(24902508-24902741)
chr7 (207-334)||(645495-645622)
chr7 (171-218)||(10251863-10251910)
chr7 (89-266)||(23960456-23960632)
chr7 (89-131)||(4794150-4794192)
chr7 (89-129)||(9564862-9564902)
chr7 (89-129)||(9567456-9567496)
[»] chr6 (43 HSPs)
chr6 (11-403)||(29253157-29253548)
chr6 (11-440)||(23882173-23882601)
chr6 (11-392)||(20465369-20465751)
chr6 (6-392)||(12039178-12039565)
chr6 (38-270)||(15930350-15930582)
chr6 (247-412)||(17864137-17864301)
chr6 (91-392)||(8465226-8465528)
chr6 (89-406)||(24541942-24542260)
chr6 (24-392)||(17234899-17235265)
chr6 (89-441)||(17869468-17869819)
chr6 (89-441)||(17879220-17879571)
chr6 (99-334)||(19077504-19077739)
chr6 (11-194)||(25805908-25806092)
chr6 (207-333)||(14259278-14259404)
chr6 (178-406)||(21322920-21323147)
chr6 (56-237)||(19658373-19658554)
chr6 (11-148)||(20653616-20653753)
chr6 (24-267)||(33666219-33666462)
chr6 (27-237)||(13869893-13870103)
chr6 (25-151)||(17863963-17864089)
chr6 (207-334)||(25969702-25969828)
chr6 (207-334)||(25974142-25974268)
chr6 (208-316)||(19171795-19171903)
chr6 (176-334)||(17527527-17527684)
chr6 (207-388)||(21723078-21723257)
chr6 (89-159)||(28623132-28623202)
chr6 (54-392)||(19100204-19100538)
chr6 (27-159)||(17876245-17876377)
chr6 (94-238)||(26965132-26965276)
chr6 (207-392)||(9281382-9281561)
chr6 (399-441)||(29254778-29254820)
chr6 (24-272)||(13195747-13195995)
chr6 (24-334)||(23879247-23879556)
chr6 (24-153)||(21706018-21706147)
chr6 (207-267)||(19894341-19894401)
chr6 (348-435)||(28623786-28623872)
chr6 (207-392)||(17855504-17855683)
chr6 (89-238)||(11960927-11961076)
chr6 (244-386)||(20989472-20989612)
chr6 (99-159)||(12028706-12028766)
chr6 (352-392)||(13195629-13195669)
chr6 (352-392)||(13870212-13870251)
chr6 (89-129)||(16308924-16308964)
[»] chr1 (17 HSPs)
chr1 (11-441)||(23477410-23477839)
chr1 (91-441)||(17850931-17851280)
chr1 (24-412)||(24986282-24986654)
chr1 (89-406)||(12753350-12753666)
chr1 (234-441)||(15803809-15804015)
chr1 (11-202)||(15803612-15803803)
chr1 (112-337)||(1625935-1626156)
chr1 (24-382)||(20840752-20841108)
chr1 (170-363)||(25349837-25350038)
chr1 (99-392)||(4246341-4246632)
chr1 (283-412)||(11667607-11667736)
chr1 (11-187)||(11667378-11667555)
chr1 (24-269)||(20200576-20200820)
chr1 (205-316)||(13165773-13165883)
chr1 (89-238)||(10339711-10339860)
chr1 (11-66)||(17850902-17850957)
chr1 (369-441)||(1625823-1625893)
[»] chr5 (25 HSPs)
chr5 (11-441)||(26328690-26329119)
chr5 (6-441)||(18221365-18221798)
chr5 (43-441)||(23624132-23624523)
chr5 (11-438)||(30605166-30605593)
chr5 (24-426)||(22082179-22082578)
chr5 (11-358)||(38405698-38406045)
chr5 (156-441)||(13338843-13339125)
chr5 (11-293)||(26037181-26037462)
chr5 (6-388)||(23757727-23758107)
chr5 (6-388)||(23823183-23823563)
chr5 (24-392)||(23420045-23420413)
chr5 (89-337)||(20714295-20714540)
chr5 (54-334)||(24190222-24190504)
chr5 (207-392)||(22404434-22404615)
chr5 (340-438)||(26037070-26037168)
chr5 (89-261)||(13941561-13941732)
chr5 (207-334)||(25105117-25105242)
chr5 (207-334)||(25164210-25164335)
chr5 (54-272)||(9422034-9422251)
chr5 (54-267)||(22245877-22246091)
chr5 (207-267)||(22251713-22251773)
chr5 (343-438)||(22184409-22184503)
chr5 (54-153)||(25104978-25105077)
chr5 (54-153)||(25164071-25164170)
chr5 (89-131)||(20740543-20740585)
[»] chr4 (19 HSPs)
chr4 (32-371)||(15699832-15700169)
chr4 (11-406)||(19183159-19183553)
chr4 (11-412)||(15161959-15162361)
chr4 (91-412)||(10724544-10724866)
chr4 (91-412)||(10938313-10938635)
chr4 (170-441)||(15622691-15622961)
chr4 (95-441)||(19659693-19660035)
chr4 (174-406)||(9069234-9069466)
chr4 (89-363)||(33746249-33746523)
chr4 (207-392)||(16384196-16384377)
chr4 (205-267)||(28019729-28019791)
chr4 (207-267)||(25117282-25117342)
chr4 (89-261)||(32862080-32862251)
chr4 (171-218)||(10197878-10197925)
chr4 (207-392)||(10191192-10191373)
chr4 (54-334)||(23399714-23399994)
chr4 (89-238)||(41785891-41786040)
chr4 (89-131)||(31971478-31971520)
chr4 (207-267)||(33898681-33898741)
[»] chr3 (27 HSPs)
chr3 (12-412)||(28051421-28051825)
chr3 (11-406)||(21253472-21253866)
chr3 (12-398)||(295749-296124)
chr3 (24-392)||(18063695-18064064)
chr3 (56-406)||(17042275-17042623)
chr3 (24-373)||(19634204-19634551)
chr3 (174-406)||(6579186-6579418)
chr3 (207-392)||(13515267-13515450)
chr3 (89-441)||(286450-286801)
chr3 (189-392)||(18034550-18034753)
chr3 (30-334)||(18548009-18548313)
chr3 (99-316)||(44452863-44453078)
chr3 (207-267)||(13791104-13791164)
chr3 (207-334)||(24195884-24196011)
chr3 (56-267)||(979898-980108)
chr3 (54-267)||(23954076-23954291)
chr3 (54-392)||(17135663-17135997)
chr3 (163-218)||(31650165-31650220)
chr3 (54-272)||(7028589-7028809)
chr3 (207-392)||(18483045-18483226)
chr3 (54-267)||(1918762-1918977)
chr3 (325-406)||(21718720-21718800)
chr3 (89-131)||(7495501-7495543)
chr3 (90-131)||(7478735-7478776)
chr3 (169-218)||(7495569-7495618)
chr3 (230-334)||(17702767-17702871)
chr3 (223-334)||(15635559-15635670)
[»] chr2 (10 HSPs)
chr2 (24-441)||(21530636-21531049)
chr2 (35-363)||(15328653-15328985)
chr2 (110-438)||(19444858-19445184)
chr2 (240-441)||(19466229-19466429)
chr2 (54-334)||(12910853-12911133)
chr2 (207-334)||(24789832-24789958)
chr2 (89-238)||(21249750-21249899)
chr2 (207-267)||(22611317-22611377)
chr2 (54-153)||(23759166-23759265)
chr2 (355-411)||(26860069-26860125)
[»] chr8 (15 HSPs)
chr8 (11-438)||(33977316-33977743)
chr8 (209-438)||(24092215-24092443)
chr8 (109-438)||(33961997-33962327)
chr8 (54-391)||(27924971-27925307)
chr8 (11-391)||(45136418-45136795)
chr8 (89-363)||(25240694-25240965)
chr8 (43-132)||(18622237-18622326)
chr8 (54-334)||(22485493-22485774)
chr8 (24-392)||(23540895-23541263)
chr8 (51-406)||(9996788-9997141)
chr8 (24-267)||(26536714-26536957)
chr8 (89-261)||(20254429-20254601)
chr8 (207-388)||(13660044-13660224)
chr8 (207-388)||(13718687-13718867)
chr8 (89-130)||(1684520-1684561)
[»] scaffold0226 (3 HSPs)
scaffold0226 (24-412)||(7026-7415)
scaffold0226 (11-412)||(17600-18002)
scaffold0226 (11-412)||(26994-27396)
[»] scaffold0213 (1 HSPs)
scaffold0213 (11-398)||(8054-8443)
[»] scaffold0069 (1 HSPs)
scaffold0069 (100-392)||(6211-6502)
[»] scaffold1001 (1 HSPs)
scaffold1001 (89-363)||(294-569)
[»] scaffold0190 (1 HSPs)
scaffold0190 (11-384)||(16096-16467)
[»] scaffold0185 (1 HSPs)
scaffold0185 (54-334)||(1886-2166)
[»] scaffold0103 (1 HSPs)
scaffold0103 (54-316)||(25196-25458)
[»] scaffold0259 (1 HSPs)
scaffold0259 (54-159)||(16844-16949)
[»] scaffold0059 (2 HSPs)
scaffold0059 (207-255)||(48065-48113)
scaffold0059 (54-148)||(47910-48004)
[»] scaffold0004 (1 HSPs)
scaffold0004 (207-267)||(356968-357028)
[»] scaffold0359 (1 HSPs)
scaffold0359 (215-316)||(2299-2398)
[»] scaffold0020 (1 HSPs)
scaffold0020 (207-334)||(12183-12309)
[»] scaffold0037 (1 HSPs)
scaffold0037 (207-267)||(109932-109992)
[»] scaffold0480 (1 HSPs)
scaffold0480 (96-131)||(11745-11780)
[»] scaffold0088 (1 HSPs)
scaffold0088 (99-334)||(36952-37186)
[»] scaffold0034 (1 HSPs)
scaffold0034 (89-131)||(73799-73841)


Alignment Details
Target: scaffold0003 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 27089 - 26659
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27089 atatctttgcaggatcagttgtggaatattcctaaagttgtgattatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctatat 26990  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  26989 tttaggactttccatatttgtctttgattcctgttttgtagatcagctggaagatctgttttgttctgaagcccagcaagaatatttgacccgtgctgct 26890  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 310  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26889 tcagtataaaaggaagacatcaagacctaattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 26790  T
Q  311 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  26789 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtatgtgatacatgtttaggactgtgtgtagagttggaaactcttgt 26690  T
Q  411 gttctatgccaaagcttttaagcaaggttgt 441  Q
    |||||| ||||||||||||||||||||||||    
T  26689 gttctacgccaaagcttttaagcaaggttgt 26659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 16437459 - 16437029
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16437459 atatctttgcaggatcagttgtggaatattcctaaagttgtgattatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctatat 16437360  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  16437359 tttaggactttccatatttgtctttgattcctgttttgtagatcagctggaagatctgttttgttctgaagcccagcaagaatatttgacccgtgctgct 16437260  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 310  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16437259 tcagtataaaaggaagacatcaagacctaattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 16437160  T
Q  311 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16437159 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtatgtgatacatgtttaggactgtgtgtagagttggaaactcttgt 16437060  T
Q  411 gttctatgccaaagcttttaagcaaggttgt 441  Q
    |||||| ||||||||||||||||||||||||    
T  16437059 gttctacgccaaagcttttaagcaaggttgt 16437029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 14927331 - 14926902
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| || |||| ||||||||||||||||| ||    
T  14927331 atatctttacagaatcagttgtggaatattcctaaagatgtgattatattt-aggaaatatttgaagctgtattggacgctcctaaagatgttcctacat 14927233  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||  ||| | |||||    
T  14927232 tttaggactttccatatttgtctctgattcctgttttgcagatcagctggacgatctgttttgttctgaagcccaacaagaccatttggcccatattgct 14927133  T
Q  211 tcagtataaaaggaagacatcaagacctgatt-gattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    |||||||||||||||||| ||||||||| |||  |||||||| |   ||||||| ||||| ||||| ||||| |||||| |||| |  ||||||||||||    
T  14927132 tcagtataaaaggaagacttcaagacctaattatattattcatgttttcattctgaaaag-tttagtttttatggttttgagtcattgtgtgttctattc 14927034  T
Q  310 ttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    ||||||| |||||||||||||||||| |  |||||||| ||||||| ||||| ||  || ||||||||||| |||||||||||| |||||||||||||||    
T  14927033 ttgtatcgtgttgatgcaagtttagttctgttttattgtgagccttccttgtttcaatt-tgatacatgttaaggactgtgtgttgagttgtaaactctt 14926935  T
Q  409 gtgttctatgccaaagcttttaagcaaggttgt 441  Q
     ||| ||| ||||||||||||||| ||||||||    
T  14926934 ctgtgctacgccaaagcttttaagaaaggttgt 14926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 15350797 - 15350368
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| || |||| ||||||||||||||||| ||    
T  15350797 atatctttacagaatcagttgtggaatattcctaaagatgtgattatattt-aggaaatatttgaagctgtattggacgctcctaaagatgttcctacat 15350699  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||  ||| | |||||    
T  15350698 tttaggactttccatatttgtctctgattcctgttttgcagatcagctggacgatctgttttgttctgaagcccaacaagaccatttggcccatattgct 15350599  T
Q  211 tcagtataaaaggaagacatcaagacctgatt-gattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    |||||||||||||||||| ||||||||| |||  |||||||| |   ||||||| ||||| ||||| ||||| |||||| |||| |  ||||||||||||    
T  15350598 tcagtataaaaggaagacttcaagacctaattatattattcatgttttcattctgaaaag-tttagtttttatggttttgagtcattgtgtgttctattc 15350500  T
Q  310 ttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    ||||||| |||||||||||||||||| |  |||||||| ||||||| ||||| ||  || ||||||||||| |||||||||||| |||||||||||||||    
T  15350499 ttgtatcgtgttgatgcaagtttagttctgttttattgtgagccttccttgtttcaatt-tgatacatgttaaggactgtgtgttgagttgtaaactctt 15350401  T
Q  409 gtgttctatgccaaagcttttaagcaaggttgt 441  Q
     ||| ||| ||||||||||||||| ||||||||    
T  15350400 ctgtgctacgccaaagcttttaagaaaggttgt 15350368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 209 - 441
Target Start/End: Complemental strand, 10280296 - 10280065
Alignment:
Q  209 cttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctatt 308  Q
    |||||||||||||||||||||||||||||| ||  | |||||||||| | |||||||||||||| |||||||| |  ||| |||||||||||||||||||    
T  10280296 cttcagtataaaaggaagacatcaagacctaatgtactattcaagccgttattctaaaaagttt-agcttttacgagtttgagtcttcatgtgttctatt 10280198  T
Q  309 cttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||    
T  10280197 cttgtatcatgttgatgcaagtttagtaccttttattgtgagcctttcttgtatcgtttgtgataaatgtttaggactgtgtgttgggttgtaaacactt 10280098  T
Q  409 gtgttctatgccaaagcttttaagcaaggttgt 441  Q
    |||| ||| ||||||||| ||||| ||||||||    
T  10280097 gtgtgctacgccaaagctgttaagtaaggttgt 10280065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 29545616 - 29545999
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||||||||||| |||||| ||  |||||||||||||||||||||   ||||||| |||| ||||||||||||||| | ||    
T  29545616 atatctttacagaatcagttgtggaatattcctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacat 29545715  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||||||||||||| | |||||||||||||| |||| ||||| |  |||||| |||||||| ||||||||| | | |||||  |||  | |||    
T  29545716 tttaggactttccatatttgtttctgatttctgttttgcagattagctgaaccgatctgctttgttctaaagcccaactaaattatttggcccaagctgc 29545815  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    ||||||||| |||| |||| |||| |||| |||||| ||     || ||||||||||||||||    |||||| ||||| ||||| |||||| |||| ||    
T  29545816 ttcagtatataagggagacttcaaaacctaattgatcat-----ccgtcattctaaaaagtttagatttttagagttttgagtctacatgtgctctactc 29545910  T
Q  310 ttgta-tcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagtt 398  Q
    ||||| | ||  |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29545911 ttgtattgattgtgatgcaagtttagaacc-tttattgtgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgttgagtt 29545999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 10280526 - 10280317
Alignment:
Q  23 gatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttc 122  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  10280526 gatcagttgtggcatattcctaaagttgtgattatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctacattttaggactttc 10280427  T
Q  123 catatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
     || ||||||| | ||| |||||||        |||||| ||||||||||||||| |||||||||| |||||||| ||||||| ||||||| ||||||||    
T  10280426 tatttttgtctctaattcctgtttt--------gctggatgatctgttttgttctaaagcccaacacgaatatttgacccgtgctgcttcaatataaaag 10280335  T
Q  223 gaagacatcaagacctga 240  Q
    ||||||||||||||||||    
T  10280334 gaagacatcaagacctga 10280317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 54 - 392
Target Start/End: Complemental strand, 20992184 - 20991845
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||||   |||  |   ||| ||||||||||||||| | ||||||||||||||||||||||| | |||||  ||||||| ||||    
T  20992184 ttatattttaggaaatatttgttattgggtggaacgatcctaaagatgttccgacattttaggactttccatatttgtttatgattcttgttttgcagat 20992085  T
Q  154 cagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaa 252  Q
     ||||| |  |||||| ||||| ||||||||| || |   |||||| |||  |||||||||||||| |||| |||| ||||||||| |||||| ||||||    
T  20992084 tagctgaaccgatctgctttgtgctgaagcccgactaatgtatttatcccaagttgcttcagtatataagggagacttcaagacctaattgatcattcaa 20991985  T
Q  253 gccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagc 351  Q
     || |||| |||||||||||    |||||||||||| ||||| |||||| |||| ||||||||||| | |||||||||||||| | | | ||||| || |    
T  20991984 tccgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctactcttgtatcatttgtgatgcaagtttag-aacatatattgtgatc 20991886  T
Q  352 ctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  20991885 ctttcttgtatcatttgtgatacttgtttaggactgtgtgt 20991845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 95 - 441
Target Start/End: Original strand, 20924666 - 20925012
Alignment:
Q  95 aaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaata 194  Q
    |||||||||||||| | |||||||||||| |||||||   |||||  ||||||| |||| ||||||| |||||  |||||| ||||||||||  ||  ||    
T  20924666 aaagatgttcctatttcttaggactttccttatttgttactgattcgtgttttgcagattagctggacgatctactttgttatgaagcccaaacaggtta 20924765  T
Q  195 tttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtct 294  Q
      |  ||| ||||||||||||||||||| || || ||||||||| |||||  |||||||   ||||||||||||| | |||| ||||||||||| ||||     
T  20924766 aatggcccatgttgcttcagtataaaagaaatacttcaagacctaattgagaattcaagatgtcattctaaaaag-tctagc-tttagggttttgagtcg 20924863  T
Q  295 tcatgtgt-tctattcttgtatcatgttgatgcaagtttagtac---cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgt 390  Q
    | |||||| |||| |||||||||||||||||| |||||||||||    | |||||| ||||||||||||||| |||||||||||||| | |||| |||||    
T  20924864 t-atgtgtgtctactcttgtatcatgttgatgtaagtttagtactatttattattgtgagcctttcttgtattgtttgtgatacatgctaaggattgtgt 20924962  T
Q  391 gtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
     | |||||||||| |||||||| |||  ||||||||| |||||||||||||    
T  20924963 attgagttgtaaa-tcttgtgtgctacaccaaagcttataagcaaggttgt 20925012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 392
Target Start/End: Original strand, 16207351 - 16207735
Alignment:
Q  6 cacagatatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcc 105  Q
    |||| ||||||||| || ||||||||| |||||||  ||||||     ||||||||||||||||||||    ||| ||   ||| ||||| | |||||||    
T  16207351 cacacatatctttgaagaatcagttgtcgaatatttctaaagtatattttatattttaggaaatattttttattggttggaacgatcctataaatgttcc 16207450  T
Q  106 tatattttaggactttccatatttgtctttgatttctgttttgtagatcagctg-gaagatctgttttgttctgaagcccaacaagaatatttaacccgt 204  Q
     |||| |||||||||||||||||||| | | |||  ||||||| |||| || || |  |||||| ||||| |||||||||| | | | |||||| |||      
T  16207451 gatatgttaggactttccatatttgtttctaattcttgttttgcagattagttgtgccgatctgctttgtgctgaagcccaccta-agtatttagcccaa 16207549  T
Q  205 gttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttc 304  Q
    |  ||||||||||| ||||||||| ||||||||| |||| |||||||||||||||| |||||||||||    |||||||||||| |||||| ||||| ||    
T  16207550 gaagcttcagtatataaggaagacttcaagacctaattgtttattcaagccatcatactaaaaagtttagatttttagggttttgagtctttatgtgctc 16207649  T
Q  305 tattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||||||| | | ||||| |||||||| |||||   ||| |||||||||||||||||| |||||||  ||||||||| |||||||    
T  16207650 tattcttgtatcgtttgtgatgtaagtttagaacctt---ttgtgagcctttcttgtatcgtctgtgatatttgtttaggattgtgtgt 16207735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 145 - 405
Target Start/End: Complemental strand, 10661415 - 10661153
Alignment:
Q  145 tttgtagatcagctggaagatctgt--tttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgatt 242  Q
    ||||||||||||||| | ||||||   ||| |||||||||||||||||| ||||| |||||| ||||||||||||| ||  || || ||||||||| |||    
T  10661415 tttgtagatcagctgaacgatctgcaatttattctgaagcccaacaagactatttgacccgtattgcttcagtatataaacaaaacttcaagacctaatt 10661316  T
Q  243 gattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttt 341  Q
      | |   ||||| |||  |||||||| ||||| |||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||| |  |||    
T  10661315 tgtcaccgaagccgtcaaactaaaaaggtttagtttttagggttttgagtctttgtgtgttctactcttgtatcgtgttgatgcaagtttagtcctgttt 10661216  T
Q  342 tattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaact 405  Q
    ||||| |||||||||||||||| | | ||||||||| | |||||||| ||| ||||||||||||    
T  10661215 tattgtgagcctttcttgtatcatct-tgatacatgctaaggactgtttgttgagttgtaaact 10661153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 207 - 412
Target Start/End: Complemental strand, 15506753 - 15506551
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||| ||||||||||| |||| |   |||||||    |||||||||||| ||||| |||||| |  |    
T  15506753 tgcttcagtatataaggaagacttcaagacctaattgcttattcaagccgtcatac---aaagtttagatttttagggttttgagtctacatgtgcttca 15506657  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaact 405  Q
    |||||||||| | | |||||||||| ||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||  | |||    
T  15506656 ttcttgtatcgtttgtgatgcaagtctagaaccttt-attgtgagtctttcttgtatcgtttgtgatacatgtttaggactgtgtgttgagtttaatact 15506558  T
Q  406 cttgtgt 412  Q
    |||||||    
T  15506557 cttgtgt 15506551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 392
Target Start/End: Complemental strand, 14165829 - 14165471
Alignment:
Q  31 gtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttg 130  Q
    ||||||||||  |||||| |  |||||||||||||||||||||    ||||||   ||| ||||| | || |||| | ||||||||||||||||   |||    
T  14165829 gtggaatatttctaaagtagatattatattttaggaaatatttatttttgtttggaacgctcctataaattttccgacattttaggactttccagcattg 14165730  T
Q  131 tctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagaca 229  Q
    | | |||||  ||||||| |||| ||||| |  ||||||  ||||  ||||||||||| | | |||||| |||  ||||||||||||||||||||||||     
T  14165729 tttctgattcttgttttgcagattagctgaaccgatctgcattgtgttgaagcccaacga-attatttagcccaagttgcttcagtataaaaggaagact 14165631  T
Q  230 tcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaag 329  Q
    ||||||||| |||| | ||||||||| |||||||||||   ||||| ||||  || ||| ||||||| ||| || |  ||||||||||||||||||||||    
T  14165630 tcaagacctaattgttcattcaagccgtcattctaaaa--gtttagatttttagggtttgagtcttcgtgtattatgctcttgtatcatgttgatgcaag 14165533  T
Q  330 tttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    ||||| | | |||| || | ||||| |||||||||  |||||||| ||||||||| |||||||    
T  14165532 tttagaatc-tttaatgtgtgccttacttgtatcgcctgtgatacttgtttaggattgtgtgt 14165471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 267
Target Start/End: Complemental strand, 6045926 - 6045746
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatct--gttttgttctgaagcccaa 186  Q
    ||||||||||||||||||| || |||||||||||| |||||||| ||||||  ||||| |||||||||||| | |||||    |||||||||||||||||    
T  6045926 gttcctaaagatgttcctacatattaggactttccttatttgtcattgattcttgtttcgtagatcagctgaacgatctacaatttgttctgaagcccaa 6045827  T
Q  187 caagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    ||||  |||||| ||| | || |||||||||||||||||||| ||||||||| |||   |||||||||  |||| ||||||    
T  6045826 caaggttatttagcccatatttcttcagtataaaaggaagacttcaagacctaattaggtattcaagctgtcatactaaaa 6045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 406
Target Start/End: Complemental strand, 42636740 - 42636508
Alignment:
Q  174 ttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagtttt 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||| ||  ||||  ||||||||| |||  | |   ||| | |||  |||||||| |||    
T  42636740 ttctgaagttcaacaagactatttgacccgtattgcttcagtatataaacaagatttcaagacctaatttgtcaccgaagtcgtcaaactaaaaaggttt 42636641  T
Q  274 agcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgat 372  Q
    || |||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||| | |  |||||||| |||||||||||||||| | | ||||    
T  42636640 agtttttagggttttgagtctttgtgtgttctactcttgtatcgtgttgatgcaagtttaatcctattttattgtgagcctttcttgtatcatct-tgat 42636542  T
Q  373 acatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||||| |||||||| ||| |||||||||||||    
T  42636541 acatgttaaggactgtttgttgagttgtaaactc 42636508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 392
Target Start/End: Complemental strand, 4459423 - 4459046
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||| | ||| ||||| |||||||||||  |||||| |   ||||||||| |||||||||||   ||| ||   ||| ||||| | ||||| | | ||    
T  4459423 atatctatccagaatcagctgtggaatatttctaaagtagattttatatttttggaaatatttgttattggttggaacgatcctataaatgtttcgacat 4459324  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||| |||||||| |||| | |||||||||||||| |||| ||||| |  |||||| |||||||||||||| ||  | | |||||| |||  | |||    
T  4459323 tttaggattttccataattgtttctgatttctgttttgcagattagctgaaccgatctgctttgttctgaagcctaaata-agtatttagcccaagctgc 4459225  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    || |||||| ||  ||||| ||||||||| |||| | ||||||||| |||| |||||||||||    |||||||||||| ||||| ||||| ||||  ||    
T  4459224 tttagtatataaacaagacttcaagacctaattgctcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctacatgtattctgctc 4459125  T
Q  310 ttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||||||||||| |||||||| | | |||||||   ||||   ||||||||| |||||||| |||||| ||||||||||    
T  4459124 ttgtatcatgttgatgaaagtttagaatc-tttattgtatgcct---ttgtatcgtatgtgatacttgtttaagactgtgtgt 4459046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 207 - 386
Target Start/End: Complemental strand, 15438585 - 15438406
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    ||||| |||||| ||||||||| ||||||||| ||  ||||||||| || |||| |||||||||||    ||||||| |||| ||||| |||||| || |    
T  15438585 tgctttagtatataaggaagacttcaagacctaataaattattcaacccgtcatactaaaaagtttagatttttaggattttgagtctacatgtgctcca 15438486  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggact 386  Q
    |||||||||| | | || ||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  15438485 ttcttgtatcgtttgtgttgcaagtctagaaccttt-attgtgagcctttcttgtatcgtttgtgatacatgtttaggact 15438406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 156 - 441
Target Start/End: Original strand, 26132547 - 26132830
Alignment:
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagcc 255  Q
    |||||| ||||| ||||||||||||||||||||||  || | | ||| | || |||||||||| ||||||||| ||||||||| |||   ||||||||||    
T  26132547 gctggacgatctattttgttctgaagcccaacaaggttaatcagcccatatttcttcagtatataaggaagacttcaagacctaattaggtattcaagcc 26132646  T
Q  256 atcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac----cttttattgcgagc 351  Q
     ||||||||||||| | ||| |||||||||||| ||||||  |||| |||| ||||||||| ||||||||||||||||||||      ||| ||| || |    
T  26132647 gtcattctaaaaag-tctag-ttttagggttttgagtctttgtgtg-tctactcttgtatcgtgttgatgcaagtttagtactgtttgtttgttgtgatc 26132743  T
Q  352 ctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    ||| |||||||| ||  ||||||||||| |||| ||||||| ||||||| ||||| | ||| |||  ||||| |||||||||||||||||    
T  26132744 cttgcttgtatc-ttcttgatacatgttaaggattgtgtgttgagttgt-aactcgt-tgtgctacaccaaaacttttaagcaaggttgt 26132830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 30 - 316
Target Start/End: Complemental strand, 12326477 - 12326190
Alignment:
Q  30 tgtggaatattcttaaagttgtgattatattttaggaaatatttga-agttgttttagacgttcctaaagatgttcctatattttaggactttccatatt 128  Q
    |||||||||||  |||||| ||  ||||||||||| |||||||||  | |||||  | ||| ||||||||||||||| | ||||||||||||||||||||    
T  12326477 tgtggaatatttctaaagtagtatttatattttagaaaatatttgttatttgttggaaacgatcctaaagatgttccgacattttaggactttccatatt 12326378  T
Q  129 tgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaaga 227  Q
    ||| | | |||  ||||||| |||| ||||| |  |||||| ||||| || || |||||| | |||||||| |||  | |||||||||||| |||| |||    
T  12326377 tgtttctaattcttgttttgaagattagctgaaccgatctgctttgtgctaaatcccaacta-aatatttagcccaagatgcttcagtatataagggaga 12326279  T
Q  228 catcaagacctgattgatt-attcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatc 316  Q
    | | ||||||| ||||||| |||||||   |||| |||||||||||  | |||||||||||| |||| ||||||| ||||||||||||||    
T  12326278 ctttaagacctaattgattcattcaagttgtcatactaaaaagtttaggtttttagggttttgagtc-tcatgtgctctattcttgtatc 12326190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 334
Target Start/End: Original strand, 11520930 - 11521210
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    ||||||||||||||||||||    ||||||   ||| ||||| | ||||| | | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  11520930 ttatattttaggaaatatttattattgtttggaacgatcctataaatgtttcgacattttaggactttccagatttgtttctgattcttgttttgcagat 11521029  T
Q  154 ca-gctggaa-gatctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
    || |||| |  ||||||  ||||| |||||||||||| | | |||||| |||  | |||||||||||| ||||||||| ||||||||| |||||||||||    
T  11521030 caagctgaaccgatctgcattgttactgaagcccaacga-attatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgattattc 11521128  T
Q  251 aagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    ||||| ||||||| ||||||| ||  |||||||| ||| ||||||||||| ||||  ||||||||| | | ||||||||||||||    
T  11521129 aagccgtcattct-aaaagttata-tttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 11521210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 274 - 437
Target Start/End: Complemental strand, 42783184 - 42783019
Alignment:
Q  274 agcttttagggttttaagtcttcatgtgttctat--tcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtg 370  Q
    ||||||||||||||||||||||  || ||||| |  |||||||||||||||||||||||||||| |  |||||||| ||| |||||||||||| | | ||    
T  42783184 agcttttagggttttaagtctttgtgagttctctactcttgtatcatgttgatgcaagtttagttctgttttattgtgagtctttcttgtatcatat-tg 42783086  T
Q  371 atacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaagg 437  Q
    ||| ||| | |||||||| ||| ||||||||||||| ||||  |||  || ||||||||||||||||    
T  42783085 ataaatgctaaggactgtttgttgagttgtaaactcatgtgcactactccgaagcttttaagcaagg 42783019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 86 - 267
Target Start/End: Original strand, 7586081 - 7586262
Alignment:
Q  86 gacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagccca 185  Q
    |||||||||||||||||||||| |||||||  |||| |||||||||  ||||||  ||||  ||||||||||||   |||||  ||| ||||||||||||    
T  7586081 gacgttcctaaagatgttcctacattttagttcttttcatatttgttattgattcttgttacgtagatcagctgagcgatctactttattctgaagccca 7586180  T
Q  186 acaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    | |||  || | | ||| | ||||||||||||| ||||||||| |||||| || |||   |||||||||| |||||||||||    
T  7586181 agaaggttaatgagcccatattgcttcagtatataaggaagacttcaagatctaatttggtattcaagccgtcattctaaaa 7586262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 238
Target Start/End: Complemental strand, 21261069 - 21260888
Alignment:
Q  56 atattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatca 155  Q
    |||||||||| |||||||| |  |||||  || ||||||||||||||||||| || ||| |||||||| |||||||   |||||  |||| |||||||||    
T  21261069 atattttagggaatatttggatatgtttg-gaagttcctaaagatgttcctacatattatgactttccttatttgttactgattcttgttatgtagatca 21260971  T
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacct 238  Q
    | || | |||||   |||||||||| |||||||||  |||| | ||| | ||||||||||||| ||||||||| |||||||||    
T  21260970 gttgaacgatctacattgttctgaaacccaacaaggttattgagcccatattgcttcagtatataaggaagacttcaagacct 21260888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 268
Target Start/End: Original strand, 23082328 - 23082507
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||||||||||||||||| || ||| |||||||| |||||||   |||||  |||| ||||||||| ||| | |||||  |  ||||||||||||||||    
T  23082328 gttcctaaagatgttcctacatattacgactttccttatttgttagtgattcttgttatgtagatcacctgaacgatctactaagttctgaagcccaaca 23082427  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaa 268  Q
    ||  || | | ||| | ||||||||||||| ||||||||| | ||||||| |||   ||||||||||  |||||||||||    
T  23082428 aggttaataagcccatattgcttcagtatataaggaagacttgaagacctaattaggtattcaagccgccattctaaaaa 23082507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 267
Target Start/End: Original strand, 10038244 - 10038461
Alignment:
Q  50 gtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgt 149  Q
    ||||| |||||||||| |||||||| |  |||||  || |||||||||||||||||||||| | |||| ||||| ||||||||  |||||  ||||  ||    
T  10038244 gtgataatattttagggaatatttggatatgtttg-gaagttcctaaagatgttcctatatataaggattttccttatttgtcactgattcttgttacgt 10038342  T
Q  150 agatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc-ttcagtataaaaggaagacatcaagacctgattgattat 248  Q
    || ||| ||| | |||||  |||||||||||||||||||||  ||   | ||| | |||| || |||||| ||||||||| ||||||||| |||   |||    
T  10038343 agttcaactgaatgatctactttgttctgaagcccaacaaggttaaggagcccatattgcttttagtatataaggaagacttcaagacctaattaggtat 10038442  T
Q  249 tcaagccatcattctaaaa 267  Q
    ||||||| |||||||||||    
T  10038443 tcaagccgtcattctaaaa 10038461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 392
Target Start/End: Complemental strand, 11589105 - 11588769
Alignment:
Q  55 tatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatc 154  Q
    |||||||||| |||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | | |||  ||||||| ||||     
T  11589105 tatattttagcaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctaattcttgttttgcagatt 11589006  T
Q  155 a-gctggaa-gatctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattca 251  Q
    | |||| |  |||||| |||||| |||||||||||| | | ||||||  ||  | |||||||||||| ||||||||| ||||||||| |||| | |||||    
T  11589005 aagctgaaccgatctgctttgttactgaagcccaacga-attatttagaccaagctgcttcagtatataaggaagacttcaagacctaattgttcattca 11588907  T
Q  252 agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag 350  Q
    |||| || | |||||||| ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | | |||||||||||||| |   | || || | |    
T  11588906 agccgtcttactaaaaag-tttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa---tctactgtgtg 11588811  T
Q  351 -cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
      ||||||||||||||||||||||| || ||||||||||||||    
T  11588810 ttctttcttgtatcgtttgtgatacttg-ttaggactgtgtgt 11588769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 334
Target Start/End: Complemental strand, 11999412 - 11999243
Alignment:
Q  163 gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattc 262  Q
    |||||| ||||| |||||||||||| | | |||||| |||  | |||||||||||| ||||||||| |||| |||| |||| ||||||||| | ||||||    
T  11999412 gatctgctttgtgctgaagcccaacta-agtatttagcccaagctgcttcagtatataaggaagacttcaaaacctaattg-ttattcaagtcgtcattc 11999315  T
Q  263 taaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    ||||||| ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | | ||||||||||||||    
T  11999314 taaaaag-tttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 11999243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 293
Target Start/End: Complemental strand, 24902741 - 24902508
Alignment:
Q  56 atattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatca 155  Q
    |||||||| | |||||||||| ||||||  || ||||||||||||||||||| || ||| |||||||| |||||||   |||||  |||| |||||||||    
T  24902741 atattttaaggaatatttgaatttgtttg-gaagttcctaaagatgttcctacatattaagactttccttatttgttactgattcttgttatgtagatca 24902643  T
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagcc 255  Q
    |||| | |||||   || |||||||||||||||||  ||   | ||| |  ||||| | |||| ||||||||| ||||| ||| |||   ||||||||||    
T  24902642 gctgaacgatctacatt-ttctgaagcccaacaaggttaacgatcccataatgctttaatatataaggaagacttcaaggcctaatttggtattcaagcc 24902544  T
Q  256 atcattctaaaaagttttagcttttagggttttaagtc 293  Q
     ||||||||||||   |||| |||||||||||| ||||    
T  24902543 gtcattctaaaaa--attagtttttagggttttgagtc 24902508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 334
Target Start/End: Complemental strand, 645622 - 645495
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| || |||||| ||||||||| |||  ||||||||||| |||| |||||||| ||||| ||||  || ||| ||||||||||| ||||     
T  645622 tgcttcagtatataaagaagacttcaagacctaattctttattcaagccgtcatactaaaaag-tttagatttttagggtttgagtcttcatgtattctg 645524  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  645523 ctcttgtatcgtttgtgatgcaagtttag 645495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 10251910 - 10251863
Alignment:
Q  171 ttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtata 218  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  10251910 ttgttctgaagcccaacaagactatttagcccgtattgcttcagtata 10251863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 266
Target Start/End: Complemental strand, 23960632 - 23960456
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| |||||||||||||  | |||||||||||| | |||||   |||||  |||| ||||||||| ||| | ||| ||  |||| |||||||||||||    
T  23960632 gttccgaaagatgttcctacgtattaggactttcctt-tttgttaatgattcgtgttatgtagatcaactgaacgatttgcattgtgctgaagcccaaca 23960534  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaa 266  Q
    ||  |||| | | | | ||||||||||||| ||||||||  ||||||||| | |   |||||||||| ||||||||||    
T  23960533 aggttattgagctcatattgcttcagtatataaggaagatttcaagacctaactaggtattcaagccgtcattctaaa 23960456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 4794150 - 4794192
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  4794150 gttcctaaagatgttcctactttttaggagtttccatatttgt 4794192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 9564902 - 9564862
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatattt 129  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  9564902 gttcctaaagatgttcctactttttaggagtttccatattt 9564862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 9567496 - 9567456
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatattt 129  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  9567496 gttcctaaagatgttcctactttttaggagtttccatattt 9567456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 11 - 403
Target Start/End: Original strand, 29253157 - 29253548
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||    
T  29253157 atatctttacatgatcagttgtggaatattcctaaagtagtgattatattttaggaaatatttgaagctgttttagacgttcctaacgatgttcctacat 29253256  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| | ||||    
T  29253257 tttaggactttccatatttgtctctgattcctgttttgcagatcagctggacgatctgttttgttttgaagcccaacaagaatatttgacccgagctgct 29253356  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 310  Q
    ||||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  29253357 tcagtataaaaggaagacaacaagacctaattgatcatccaagccatcattctaaaaag-tttagcttttaggattttgagtcttcatgtgttctattct 29253455  T
Q  311 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaa 403  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29253456 tgtatcatgttgatgcaagtttagtaccttttattgtgagcctttcttgtatcatttgtgatacatgtttaggactgtgtgtagagttgtaaa 29253548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 440
Target Start/End: Original strand, 23882173 - 23882601
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    ||||||||  || |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||    
T  23882173 atatctttatagaatcagttgtggaatattcctaaagatgtgattatattttaggaaatatttgaagctgttttggacgttcctaaagatgttcctacat 23882272  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    |||||||||||||| |||| ||| |||||  |||| || |||| ||||| | ||| || ||||||||||| |||||||    |  ||| ||| | |||||    
T  23882273 tttaggactttccaaatttttctctgattcttgttatgcagattagctgaacgatttgctttgttctgaaacccaacatcgtttattagcccatattgct 23882372  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 310  Q
    |||||||| ||||||| | ||||||||| |||||| ||||||||| ||||| || ||||||| || |||||||||||| ||||||  ||||||||| |||    
T  23882373 tcagtatataaggaaggcttcaagacctaattgatcattcaagccgtcattatataaagttt-agattttagggttttgagtctttgtgtgttctactct 23882471  T
Q  311 tgtatcatgttgatgcaagtttagtacc-ttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttg 409  Q
    |||||| ||||||| |||||||||| |  |||||||| ||||||||||||||||  || ||||||||||| |||||||||||| ||||| ||||||||||    
T  23882472 tgtatcgtgttgattcaagtttagtcctgttttattgtgagcctttcttgtatcagtt-tgatacatgttaaggactgtgtgttgagttataaactcttg 23882570  T
Q  410 tgttctatgccaaagcttttaagcaaggttg 440  Q
    ||| ||| ||||||| | |||||||||||||    
T  23882571 tgtgctacgccaaagttgttaagcaaggttg 23882601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 11 - 392
Target Start/End: Original strand, 20465369 - 20465751
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| ||||| |||||||||||  |||||| ||  |||||||||||||||||||||   ||| ||   ||| ||||||||||||||| | ||    
T  20465369 atatctttacagaatcagctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccgacat 20465468  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||||||||||||| | |||||  ||||||| |||| ||||| |  |||||| |||||  ||||||||||| | | |||||| |||  | |||    
T  20465469 tttaggactttccatatttgtttatgattcttgttttgcagattagctgaactgatctgctttgtgttgaagcccaactaaagtatttagcccaagctgc 20465568  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    | ||||||| |||| |||| |||||| |  |||||| |||||||   |||| |||||||||||    |||||||||||| ||||| |||||| |||||||    
T  20465569 tacagtatataagggagacttcaagaacaaattgatcattcaagttgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctattc 20465668  T
Q  310 ttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    || |||| | | |||||||||||||| |||| | |||| || |||||||||||||||||||||||| |||||||||||||||||    
T  20465669 ttttatcttttgtgatgcaagtttagaacctat-attgtgaacctttcttgtatcgtttgtgatacttgtttaggactgtgtgt 20465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 6 - 392
Target Start/End: Original strand, 12039178 - 12039565
Alignment:
Q  6 cacagatatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcc 105  Q
    |||| |||||||| ||| ||||| |||||||||||  |||||| ||  |||||||||||||||||||||   ||||||| |||| |||||||||||||||    
T  12039178 cacacatatctttacagaatcagctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttcc 12039277  T
Q  106 tatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgt 204  Q
     | ||||||||||||||||||||||| | |||||  | ||||| | || ||||| |  |||||| |||||  ||||||  ||| |   ||||||  ||      
T  12039278 gacattttaggactttccatatttgtttatgattcttattttgcatattagctgaactgatctgctttgtgttgaagcataactaatgtatttagtccaa 12039377  T
Q  205 gttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttc 304  Q
    | ||||| |||||| |||| |||| ||||||||| |||| | ||| ||| | |||| |||||||||||    |||||||||||| ||||| |||||| ||    
T  12039378 gctgctttagtatataagggagacttcaagacctaattggtcattaaagtcgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctc 12039477  T
Q  305 tattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    || ||||||||| | | |||||||||||||| |||| || ||| || |||||||||||| ||||||||||| |||||||||||||||||    
T  12039478 tactcttgtatcgtttgtgatgcaagtttagaacctatt-ttgtgatcctttcttgtattgtttgtgatacttgtttaggactgtgtgt 12039565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 38 - 270
Target Start/End: Original strand, 15930350 - 15930582
Alignment:
Q  38 attcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttga 137  Q
    |||| ||||| ||||||||||||||| ||||||||||||| | |||| |||||||||||||||||||||| |||||||||||||| |||||||||| |||    
T  15930350 attcctaaagatgtgattatattttacgaaatatttgaagctattttggacgttcctaaagatgttcctacattttaggactttctatatttgtctctga 15930449  T
Q  138 tttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacc 237  Q
    ||  ||||||| ||||||| |||| |||||| |||||| | ||||||||  |   ||  |  ||| | |||||||||||||||| |||||| ||||||||    
T  15930450 ttcgtgttttgcagatcagttggacgatctgctttgttttaaagcccaaacatgttaaatggcccatattgcttcagtataaaacgaagacttcaagacc 15930549  T
Q  238 tgattgattattcaagccatcattctaaaaagt 270  Q
    | |||||  ||||||||| ||||||||||||||    
T  15930550 taattgagaattcaagccgtcattctaaaaagt 15930582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 247 - 412
Target Start/End: Original strand, 17864137 - 17864301
Alignment:
Q  247 attcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtaccttttattg 346  Q
    ||||||||| |||||||| |||||||    |||| ||||||| ||||| |||||| |||| ||||||||||||||||||||||||||| |||||| ||||    
T  17864137 attcaagccgtcattctataaagtttagatttttggggttttgagtctacatgtgctctactcttgtatcatgttgatgcaagtttagaaccttt-attg 17864235  T
Q  347 cgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgt 412  Q
     |||||||||||||||||| |||||||||||||||||||||||||| |||||  | ||||||||||    
T  17864236 tgagcctttcttgtatcgtctgtgatacatgtttaggactgtgtgttgagtttgatactcttgtgt 17864301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 91 - 392
Target Start/End: Original strand, 8465226 - 8465528
Alignment:
Q  91 tcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaa 189  Q
    ||||||||||||||  | ||||||||||||||||||||||| | |||||  ||||||| |||| ||||| |  ||| || ||||| |||||||||||| |    
T  8465226 tcctaaagatgttctgacattttaggactttccatatttgtttctgattcttgttttgcagattagctgaaccgatatgctttgtactgaagcccaacta 8465325  T
Q  190 gaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttta 289  Q
        ||||| |||  | |||||||||||| |||| |||| ||||||||| |||||| ||||||||| |||  |||||||||||    ||||| ||||||     
T  8465326 atgaatttagcccaagctgcttcagtatataagggagacttcaagacctaattgatcattcaagccgtcacactaaaaagtttagatttttaaggttttg 8465425  T
Q  290 agtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    ||||| |||||| |||| ||||||||| | | |||||||||||||| ||| | ||||| ||  |||||||||||||| |||||||| |||||||||||||    
T  8465426 agtctacatgtgctctactcttgtatcgtttatgatgcaagtttagaacc-tatattgtgattctttcttgtatcgtctgtgatacttgtttaggactgt 8465524  T
Q  389 gtgt 392  Q
    ||||    
T  8465525 gtgt 8465528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 406
Target Start/End: Complemental strand, 24542260 - 24541942
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatat-ttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaac 187  Q
    |||||||||||||||| ||  |||||||||||||| | | |||    |||||  ||| ||| |||||||||||| |||||| |||||||||||||||||     
T  24542260 gttcctaaagatgttcttactttttaggactttccttttgttggtactgattcgtgtgttgcagatcagctggacgatctgctttgttctgaagcccaaa 24542161  T
Q  188 aagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttt 287  Q
      |  ||||| |||||| ||||||||||||| |   ||||| ||||||||| |||  ||||||||||| |||  |||||||| ||||| |||||||||||    
T  24542160 ccgtttatttgacccgtattgcttcagtatatattcaagacttcaagacctaattatttattcaagccgtcaaactaaaaaggtttagtttttagggttt 24542061  T
Q  288 taagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggact 386  Q
    | |||| |  ||||||||| |||||||| ||||||||||||||||||| |  |||||||| ||| |||| ||||||| | | ||||||||| | ||||||    
T  24542060 tgagtcgttgtgtgttctactcttgtattatgttgatgcaagtttagttctgttttattgtgagtcttttttgtatcatct-tgatacatgctaaggact 24541962  T
Q  387 gtgtgtagagttgtaaactc 406  Q
     | ||| |||||||||||||    
T  24541961 atttgttgagttgtaaactc 24541942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 392
Target Start/End: Complemental strand, 17235265 - 17234899
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    ||||| |||||||||||  |||| | |  |||||||||||||||||||||    ||||||   | | ||||| | ||||||| | |||||||||||||||    
T  17235265 atcagatgtggaatatttctaaattagatattatattttaggaaatatttattattgtttggaatgatcctataaatgttccgacattttaggactttcc 17235166  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    | |||||| | |||||  ||||||| |||| ||||| |  |||||| ||||| |||||||||||||| | |||||| |||  ||||||| |||||| ||     
T  17235165 agatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaacaa-attatttagcccaagttgctttagtatataaa 17235067  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagct-tttagggttttaagtcttcatgtgttctattcttgtatcatgt- 320  Q
    |||||| ||||||||| |||| | ||||||||| |||| |||||||| ||||| | ||||||||||| ||||||||||| ||||  ||||||||| | |     
T  17235066 gaagacttcaagacctaattgttcattcaagccgtcatactaaaaag-tttagatctttagggtttt-agtcttcatgtattctgctcttgtatcgtttg 17234969  T
Q  321 tgatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||||||||| |   | || || | |  ||||||||||||||||||||||| |||||||||||||||||    
T  17234968 tgatgcaagtttagaa---tctaatgtgtgttctttcttgtatcgtttgtgatacttgtttaggactgtgtgt 17234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 441
Target Start/End: Original strand, 17869468 - 17869819
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgt--tttgttctgaagcccaa 186  Q
    ||||| |||||||||||| | | ||| |||||||| ||||||| | |||||  |||||||||| ||| ||| | |||||    |||||||||||||||||    
T  17869468 gttccgaaagatgttcctttttcttatgactttccttatttgt-tctgattcgtgttttgtagttcatctgaacgatctccaatttgttctgaagcccaa 17869566  T
Q  187 caagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtt 286  Q
     |||  |  ||| ||| | ||||||||||||||||||||||| ||||||||| ||||||||| |||||| |||||   |||||| |  | ||||||||||    
T  17869567 taaggtttgttatcccatattgcttcagtataaaaggaagacttcaagacctaattgattatgcaagccgtcatttctaaaagtct--ggttttagggtt 17869664  T
Q  287 ttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac----cttttattgcgagcctttcttgtatcgtttgtgatacatgtttag 382  Q
    || ||| ||  |||| |||| ||||||||||||||| ||||||||||||||      |||||||||||||||||||||||| ||  ||||||| ||| ||    
T  17869665 ttgagtatttgtgtg-tctactcttgtatcatgttggtgcaagtttagtactgtttgtttattgcgagcctttcttgtatc-ttcttgatacaagttaag 17869762  T
Q  383 gactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    || ||| ||| ||||||| ||||| | ||| |||  ||||| |||||||||||||||||    
T  17869763 gattgtttgttgagttgt-aactcgt-tgtgctacaccaaaacttttaagcaaggttgt 17869819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 441
Target Start/End: Original strand, 17879220 - 17879571
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgt--tttgttctgaagcccaa 186  Q
    ||||| |||||||||||| | | ||| |||||||| ||||||| | |||||  |||||||||| ||| ||| | |||||    |||||||||||||||||    
T  17879220 gttccgaaagatgttcctttttcttatgactttccttatttgt-tctgattcgtgttttgtagttcatctgaacgatctccaatttgttctgaagcccaa 17879318  T
Q  187 caagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtt 286  Q
     |||  |  ||| ||| | ||||||||||||||||||||||| ||||||||| ||||||||| |||||| |||||   |||||| |  | ||||||||||    
T  17879319 taaggtttgttatcccatattgcttcagtataaaaggaagacttcaagacctaattgattatgcaagccgtcatttctaaaagtct--ggttttagggtt 17879416  T
Q  287 ttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac----cttttattgcgagcctttcttgtatcgtttgtgatacatgtttag 382  Q
    || ||| ||  |||| |||| ||||||||||||||| ||||||||||||||      |||||||||||||||||||||||| ||  ||||||| ||| ||    
T  17879417 ttgagtatttgtgtg-tctactcttgtatcatgttggtgcaagtttagtactgtttgtttattgcgagcctttcttgtatc-ttcttgatacaagttaag 17879514  T
Q  383 gactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    || ||| ||| ||||||| ||||| | ||| |||  ||||| |||||||||||||||||    
T  17879515 gattgtttgttgagttgt-aactcgt-tgtgctacaccaaaacttttaagcaaggttgt 17879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 99 - 334
Target Start/End: Complemental strand, 19077739 - 19077504
Alignment:
Q  99 atgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatattt 197  Q
    ||||||| | ||||||||||||||| ||||||| | |||||  ||||||| |||| ||||| |  |||||| ||||| |||||||||||| | | ||| |    
T  19077739 atgttccgacattttaggactttccctatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaacta-agtatct 19077641  T
Q  198 aacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttca 297  Q
    | |||  | |||||||||||| ||||||||| ||||||||| |||| | ||||||||| | || |||||||||||    |||||||||||| |||||| |    
T  19077640 agcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtaatactaaaaagtttagatttttagggttttgagtcttta 19077541  T
Q  298 tgtgttctattcttgtatcatgttgatgcaagtttag 334  Q
    ||| ||||  |||||||||||||| ||||||||||||    
T  19077540 tgtattctgctcttgtatcatgttcatgcaagtttag 19077504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 25806092 - 25805908
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||| | ||| |||| ||| |||||||| ||||||| |   ||||||||||||| |||||| |  |||||||||||| ||||||||||||||| | |     
T  25806092 atatctctacagaatcaattgaggaatatttttaaagtagcatttatattttaggagatatttaatattgttttagacgatcctaaagatgttccgacac 25805993  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaata 194  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| ||||| |  |||||| ||||| |||||||||||| ||||||    
T  25805992 tttaggactttccatatttgtctctgattcctgttttgcagattagctgaaccgatctgctttgtgctgaagcccaactagaata 25805908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 207 - 333
Target Start/End: Complemental strand, 14259404 - 14259278
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||||| ||||||| | ||||  ||||||||||    |||||||||||| |||||| |||| |||||    
T  14259404 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagtcgtcatattaaaaagtttagatttttagggttttgagtctttatgtattcta 14259305  T
Q  307 ttcttgtatcatgttgatgcaagttta 333  Q
     ||||||||||||||||||||||||||    
T  14259304 ctcttgtatcatgttgatgcaagttta 14259278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 178 - 406
Target Start/End: Original strand, 21322920 - 21323147
Alignment:
Q  178 gaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagct 277  Q
    |||||||||||| | ||||| |||||| ||||||||||||  |   ||||| ||||||||| |||||| ||||||||| || | |||||||  | ||| |    
T  21322920 gaagcccaacaaaactattttacccgtattgcttcagtatttatacaagacttcaagacctaattgataattcaagccgtcgtcctaaaaaagtctag-t 21323018  T
Q  278 tttagggttttaagtcttcatgtgt-tctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgataca 375  Q
    ||||||||||| ||||||  ||||| |||| ||||||||| ||||||||||||||||||||  |||||||| ||||||||| |||| | | | |||||||    
T  21323019 tttagggttttgagtcttt-tgtgtgtctactcttgtatcgtgttgatgcaagtttagtactgttttattgtgagcctttcgtgtaacatct-tgataca 21323116  T
Q  376 tgtttaggactgtgtgtagagttgtaaactc 406  Q
    || | |||||||| | | |||||||||||||    
T  21323117 tgataaggactgtttattgagttgtaaactc 21323147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 19658554 - 19658373
Alignment:
Q  56 atattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatca 155  Q
    |||||||||| ||| |||| |  |||||| |  |||||||||||||||| || |||||||||| ||||||||||||  ||||||  ||||  ||||||||    
T  19658554 atattttagggaatctttggatatgttttggcggttcctaaagatgttcatacattttaggaccttccatatttgttattgattcttgttacgtagatca 19658455  T
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacc 237  Q
    |||| | |||||   ||||||||||||||||||||| |||| | ||| | ||||||||||||| || |||||  ||||||||    
T  19658454 gctgaacgatctacattgttctgaagcccaacaagattattgagcccatattgcttcagtatataaagaagatttcaagacc 19658373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 20653753 - 20653616
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| ||||| |||||||||||  ||||||  |  |||||||||| ||||||||||   ||||||| |||| ||||||||||||||| | ||    
T  20653753 atatctttacagaatcagctgtggaatatttctaaagtaatatttatattttaagaaatatttgttattgttttggacgatcctaaagatgttccaacat 20653654  T
Q  111 tttaggactttccatatttgtctttgatttctgttttg 148  Q
    ||||||||||||||||||||| | |||||  |||||||    
T  20653653 tttaggactttccatatttgtttctgattcttgttttg 20653616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 267
Target Start/End: Complemental strand, 33666462 - 33666219
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  ||||||     ||||||||||||||||||||    ||||||   ||| ||||| | ||||||| | |||||||||||||||    
T  33666462 atcagttgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctata-atgttccgacattttaggactttcc 33666364  T
Q  124 atatttgtctttgatttctgttttgtagatca-gctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaa 221  Q
    | |||||| | |||||  ||||||| |||| | |||| |  ||||||  || | |||||||||||||| | |||||| |||  | |||||||||||| ||    
T  33666363 agatttgtttctgattattgttttgcagattaagctgaaccgatctgcattttgctgaagcccaacaa-attatttagcccaagctgcttcagtatataa 33666265  T
Q  222 ggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||    
T  33666264 ggaagacttcaagacctaattgtttattcaagccatcattctaaaa 33666219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 237
Target Start/End: Original strand, 13869893 - 13870103
Alignment:
Q  27 agttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccata 126  Q
    ||||||||||||||  |||||| |  |||||||||||||||||||||    ||||||   ||| ||||| | ||||||| | |||||||||||||| | |    
T  13869893 agttgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttagaacgatcctataaatgttccgacattttaggactttcaaga 13869992  T
Q  127 tttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaa 225  Q
    ||||| | |||||  ||||||| |||| ||||| |  ||| || ||||| |||||||||||||| | |||||| |||||| | |||||||||| ||||||    
T  13869993 tttgtttctgattcttgttttgcagattagctgaaccgatgtgctttgtgctgaagcccaacaa-attatttagcccgtgctacttcagtatataaggaa 13870091  T
Q  226 gacatcaagacc 237  Q
    ||| ||||||||    
T  13870092 gacttcaagacc 13870103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 17863963 - 17864089
Alignment:
Q  25 tcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcca 124  Q
    ||||||||||||||||  ||||||  |  ||||||||||| |||||||||   ||||||| |||| |||||| |||||||| | ||||||||||||||||    
T  17863963 tcagttgtggaatatttctaaagtaatatttatattttagaaaatatttgttattgttttggacgatcctaatgatgttccgacattttaggactttcca 17864062  T
Q  125 tatttgtctttgatttctgttttgtag 151  Q
    ||||||| | |||||  ||||||||||    
T  17864063 tatttgtttctgattcttgttttgtag 17864089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 334
Target Start/End: Complemental strand, 25969828 - 25969702
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||||| |||| ||||||||  |||| ||||  || ||| ||||||||||||||||     
T  25969828 tgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcatactaaaaag--ttagatttttagggtttgagtcttcatgtgttctg 25969731  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  25969730 ctcttgtatcgtttgtgatgcaagtttag 25969702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 207 - 334
Target Start/End: Complemental strand, 25974268 - 25974142
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||||| |||| ||||||||  |||| ||||  || ||| ||||||||||||||||     
T  25974268 tgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcatactaaaaag--ttagatttttagggtttgagtcttcatgtgttctg 25974171  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  25974170 ctcttgtatcgtttgtgatgcaagtttag 25974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 316
Target Start/End: Complemental strand, 19171903 - 19171795
Alignment:
Q  208 gcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctat 307  Q
    ||||||||||| |||||||||  |||||||| |||||| ||||||||| |||| |||||||||||    |||||||||||| |||||| |||| ||||      
T  19171903 gcttcagtatataaggaagactccaagacctaattgatcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtattctgc 19171804  T
Q  308 tcttgtatc 316  Q
    |||||||||    
T  19171803 tcttgtatc 19171795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 334
Target Start/End: Original strand, 17527527 - 17527684
Alignment:
Q  176 ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttag 275  Q
    |||||||||||||| | |||||| |||  | |||||||||||| ||||||||| | ||||||| |||| | ||||||||| |||| |||||||||||       
T  17527527 ctgaagcccaacaa-attatttagcccaagctgcttcagtatataaggaagactttaagacctaattgctcattcaagccgtcatactaaaaagtttaga 17527625  T
Q  276 cttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
     |||||||| ||| ||||||||||| ||||  ||||||||| | | ||||||||||||||    
T  17527626 attttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 17527684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 21723078 - 21723257
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| || |||||| ||||| ||| |||| ||||||| ||| |||||||||||   ||||| ||||  || ||| ||||||||||| ||||     
T  21723078 tgcttcagtatataaagaagacttcaagccctaattgtttattcatgccgtcattctaaaa--gtttagatttttagggtttgagtcttcatgtattctg 21723175  T
Q  307 ttcttgtatca-tgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
      ||||||||| | |||||||| |||||| | | |||| || | |||||||||||||||  |||||||| |||||||||||||    
T  21723176 cacttgtatcatttttgatgcaggtttagaatc-tttactgtgtgcctttcttgtatcggctgtgatacttgtttaggactgt 21723257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 28623132 - 28623202
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctg 159  Q
    ||||||||||||||||| | ||||||||||||||||| ||||| | |||||||||||||| |||| |||||    
T  28623132 gttcctaaagatgttccgacattttaggactttccatctttgtttatgatttctgttttgcagattagctg 28623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 392
Target Start/End: Complemental strand, 19100538 - 19100204
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    ||||||||||||||||||||    ||| ||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  19100538 ttatattttaggaaatatttattattggttggaacgatcctataaatgttccgacattttaggactttccagatttgtttatgattcttgttttgcagat 19100439  T
Q  154 cagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctga-ttgattattca 251  Q
     ||||| |  |||||| ||||| ||||||||||||   | |||||| |||  | |||||||||||  ||||||||| ||||||||| | ||  |||||||    
T  19100438 tagctgaaccgatctgctttgtgctgaagcccaac-ttagtatttagcccaagctgcttcagtat--aaggaagacttcaagacctaatttttttattca 19100342  T
Q  252 agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag 350  Q
    |||| ||||  ||| ||| ||||| |||||||| ||| ||||||||||| ||||  ||||||||| | | |||||||||||||| |   | || || | |    
T  19100341 agccgtcatagtaacaag-tttagattttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa---tctactgtgtg 19100247  T
Q  351 -cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
      |||||||||||||| |||||||| ||||||||| |||||||    
T  19100246 ttctttcttgtatcgtctgtgatacttgtttaggattgtgtgt 19100204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 17876245 - 17876377
Alignment:
Q  27 agttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccata 126  Q
    ||||||||||||||  ||||||  |  |||||||||||||||| ||||   || ||||   || ||||||||||||||| | |||||||||||||| |||    
T  17876245 agttgtggaatatttctaaagtaatatttatattttaggaaatgtttgttatttttttgttcgatcctaaagatgttccgacattttaggactttcgata 17876344  T
Q  127 tttgtctttgatttctgttttgtagatcagctg 159  Q
    ||||| |||||||  ||||||| |||| |||||    
T  17876345 tttgtttttgattcttgttttgcagattagctg 17876377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 26965132 - 26965276
Alignment:
Q  94 taaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaat 193  Q
    |||||||||||||| |||||| ||||||||||||||||   |||||  ||||  |||||||||||| | ||| |   ||||||||||||||  ||||  |    
T  26965132 taaagatgttcctacattttatgactttccatatttgttactgattcttgttacgtagatcagctgaacgatgtacattgttctgaagccccgcaaggtt 26965231  T
Q  194 atttaacccgtgttgcttcagtataaaaggaagacatcaagacct 238  Q
    ||| | ||  | ||||||||||||| ||||||||| |||||||||    
T  26965232 attgagccaatattgcttcagtatataaggaagacttcaagacct 26965276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 392
Target Start/End: Original strand, 9281382 - 9281561
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||||  ||||||| ||||||||| |||| | ||||||||  ||||||| |||||||| |  || ||||| ||| ||||||||||| ||||     
T  9281382 tgcttcagtataa--ggaagacttcaagacctaattgttcattcaagcagtcattct-aaaagtttaaatttgtaggg-tttgagtcttcatgtattctg 9281477  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
     ||||||||||| | |||||||||||||| |   | ||||| | |  ||||||||||||||||||||||| || ||||||||||||||    
T  9281478 ctcttgtatcatttgtgatgcaagtttagaa---tctattgtgtgttctttcttgtatcgtttgtgatacttg-ttaggactgtgtgt 9281561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 441
Target Start/End: Original strand, 29254778 - 29254820
Alignment:
Q  399 gtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  29254778 gtaaactcttgtgttctatgccaaagcttttaagtaaggttgt 29254820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 13195995 - 13195747
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    ||||| |||||||||||  |||||| |  |||||||||||||||||||||    ||||||   ||| ||||| | || | || | ||||||||||||| |    
T  13195995 atcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctataaatatgccgacattttaggacttttc 13195896  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    | |||||| | |||||  ||||||| |||| ||| | |  |||||| ||||| |||||||||||| | | |||||| |||  | |||||||||||| ||     
T  13195895 agatttgtttctgattcttgttttgcagattagcagaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaagctgcttcagtatataaa 13195797  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttt 272  Q
    ||||||   ||||||| |||| ||||||||||| | || |||||||||||    
T  13195796 gaagactgtaagacctaattgtttattcaagccgttatactaaaaagttt 13195747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 334
Target Start/End: Complemental strand, 23879556 - 23879247
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  ||||||     ||||||||| |||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||    
T  23879556 atcagttgtggaatatttctaaagtgtattttatattttgggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttcc 23879457  T
Q  124 atatttgtctttgatttctgttttgtagatca-gctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaa 221  Q
    | |||||| | |||||  ||||||| |||| | |||| |  ||||||  || |  ||||||||||| | | |||||| |||  | |||||||| ||| ||    
T  23879456 agatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattttgttgaagcccaacga-attatttagcccaagctgcttcagcatataa 23879358  T
Q  222 ggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt- 320  Q
    ||||||| ||||||||| || | | ||||||||| |||||||||||   ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | |     
T  23879357 ggaagacttcaagacctaat-gttcattcaagccgtcattctaaaa--gtttagatttttcgggtttgagtcttcatgtattctgctcttgtatcgtttg 23879261  T
Q  321 tgatgcaagtttag 334  Q
    ||||||||||||||    
T  23879260 tgatgcaagtttag 23879247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 21706018 - 21706147
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  |||||| |  |||||||||||||||||||||    || |||   | | ||||| | ||||||| | |||||||||||||||    
T  21706018 atcagttgtggaatatttctaaagtagatattatattttaggaaatatttattattatttggaatgatcctataaatgttccgacattttaggactttcc 21706117  T
Q  124 atatttgtctttgatttctgttttgtagat 153  Q
    | ||| |||| |||||  ||||||||||||    
T  21706118 agattagtctctgattcatgttttgtagat 21706147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 19894341 - 19894401
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||||  |||||||||||    
T  19894341 tgcttcagtatataaggaagacttcaagacctaattgttcattcaagctgtcattctaaaa 19894401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 435
Target Start/End: Complemental strand, 28623872 - 28623786
Alignment:
Q  348 gagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaa 435  Q
    |||||||||||||||| | | ||||||| ||| |||||||| | | ||||||||||||||||| | |||  ||||||||| |||||||    
T  28623872 gagcctttcttgtatcatct-tgatacaagttaaggactgtttattgagttgtaaactcttgtatgctacaccaaagcttgtaagcaa 28623786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 392
Target Start/End: Complemental strand, 17855683 - 17855504
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||  ||||||||||  ||||||| |||    |||| |||| ||| ||| |||||| |||| || |     
T  17855683 tgcttcagtatataaggaagacttcaagacctaattctttattcaagctgtcattctgaaa---gttagatttttggggtttgagtctttatgtattatg 17855587  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
     ||||||||| | | |||||||||||||| |   | ||||| | |   ||||||||||||||||||||| || ||||||||||||||    
T  17855586 ctcttgtatcgtttgtgatgcaagtttagaa---tctattgtgtgttcttcttgtatcgtttgtgatacttg-ttaggactgtgtgt 17855504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 11961076 - 11960927
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| ||||||||| |||  | |||||||||||| | |||||   |||||  | || |||||||||| || | |||||  |||||||||||||||||||    
T  11961076 gttccgaaagatgtttctacttcttaggactttccttttttgttactgattcgtattatgtagatcagttgaacgatctactttgttctgaagcccaaca 11960977  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacct 238  Q
    ||  || ||| ||  | ||| || |||||| ||||||||| |||||||||    
T  11960976 aggttaattagcctatattgtttaagtatataaggaagacttcaagacct 11960927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 386
Target Start/End: Original strand, 20989472 - 20989612
Alignment:
Q  244 attattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtacctttt 342  Q
    |||| ||||||  |||| |||||||||||    |||||||||||| |||||| ||||  |||| |||||||||   | |||||||||| ||| |||||||    
T  20989472 attactcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtcctctaatcttgtatcggttgtgatgcaagtctagaacctttt 20989571  T
Q  343 attgcgagcctttcttgtatcgtttgtgatacatgtttaggact 386  Q
     |   ||||||||||| ||||||  ||||||| |||||||||||    
T  20989572 gt---gagcctttcttatatcgtccgtgatacttgtttaggact 20989612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 12028706 - 12028766
Alignment:
Q  99 atgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctg 159  Q
    ||||||| | ||||||||||||| ||||||||| | ||| |||||||||| |||| |||||    
T  12028706 atgttccgacattttaggacttttcatatttgtttctgaattctgttttgcagattagctg 12028766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 13195669 - 13195629
Alignment:
Q  352 ctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  13195669 ctttcttggatcgtctgtgatacttgtttaggactgtgtgt 13195629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 13870212 - 13870251
Alignment:
Q  352 ctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  13870212 ctttcttgtatcgtttgtgatacttg-ttaggactgtgtgt 13870251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 16308924 - 16308964
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatattt 129  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  16308924 gttcctaaagatgttcctactttttaggagtttccatattt 16308964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 441
Target Start/End: Original strand, 23477410 - 23477839
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||    
T  23477410 atatctttacaggatcaattgtggaatattcctaaagttgtgattatattttaggaaatatttgaagttgatttggacgttcctaaagatgtttctacat 23477509  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatc-tgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    | ||||||||||||||||||||| ||||| ||||||| |||||| |||||| |||| | ||||||||||||||||||||||||||||| ||| |||||||    
T  23477510 tgtaggactttccatatttgtctatgattcctgttttatagatcggctggacgatctttttttgttctgaagcccaacaagaatatttgacctgtgttgc 23477609  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    ||||||||||||||||| ||||||||||| ||  |||||||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  23477610 ttcagtataaaaggaagccatcaagacctaatgtattattcaagccgtcattctaaaaag-tttatcttttagggttttgagtcttcatgtgttctattc 23477708  T
Q  310 ttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttg 409  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||||| ||||||||| | ||||||| ||||||||||||||||    
T  23477709 ttgtatcatg-tgatgcaagtttagtaccttttattgtgatcctttcttgtatcttttgtgattcatgtttagaattgtgtgttgagttgtaaactcttg 23477807  T
Q  410 tgttctatgccaaagcttttaagcaaggttgt 441  Q
    ||| ||| ||||||||| |||||  |||||||    
T  23477808 tgtgctacgccaaagctgttaagttaggttgt 23477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 91 - 441
Target Start/End: Original strand, 17850931 - 17851280
Alignment:
Q  91 tcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaag 190  Q
    ||||||||||||   |||||||||||||||||||| ||| ||| |||||  ||||||| |||| ||||||| ||| || |||||||||||||||||||||    
T  17850931 tcctaaagatgtgattatattttaggactttccatttttatctctgattcttgttttgcagattagctggacgatttgctttgttctgaagcccaacaag 17851030  T
Q  191 aatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaa 290  Q
      |  ||| ||| | || |||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||||| | || |||||||||||| |    
T  17851031 gtttattagcccatatttcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaaagtgt-agtttttagggttttga 17851129  T
Q  291 gtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtacc-ttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtg 389  Q
    |||||  ||||||||| |||||||||  ||||||||||||||||| |  |||||||| ||||||||||||||||  || ||||||||||| |||||||||    
T  17851130 gtctttgtgtgttctactcttgtatcgcgttgatgcaagtttagtcctgttttattgtgagcctttcttgtatcagtt-tgatacatgttaaggactgtg 17851228  T
Q  390 tgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    ||| ||||||||||||||||||| ||| |||||| || ||||||||||||||    
T  17851229 tgttgagttgtaaactcttgtgtgctacgccaaaactattaagcaaggttgt 17851280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 24 - 412
Target Start/End: Complemental strand, 24986654 - 24986282
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  ||||||  |  |||||||||||||||||||||   |||||||  ||| || |||||||||||| | |||||||||||||||    
T  24986654 atcagttgtggaatatttctaaagtaatatttatattttaggaaatatttgtttttgttttgaacgatcataaagatgttccgacattttaggactttcc 24986555  T
Q  124 atatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    |||||||| | ||||||||||||||||||| ||||| |  ||| || ||| ||||||||| |||| | | |||||| |||  | |||||||||||| |||    
T  24986554 atatttgtttctgatttctgttttgtagattagctgaaccgatttgcttttttctgaagcgcaactaaagtatttagcccaagctgcttcagtatataag 24986455  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttg 322  Q
    | |||| ||||||||| || ||| ||||||||| ||||||||||||||||    |||||||||||| ||||| |||  ||       |||        ||    
T  24986454 ggagacttcaagacctaatagatcattcaagccgtcattctaaaaagtttagatttttagggttttgagtctacat-cgt-------ttg--------tg 24986371  T
Q  323 atgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgt 412  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||  | ||||||||||    
T  24986370 atgcaagtttagaacc-tttattgtgagccttacttgtatcgtttgtgatacatgtttaggactgtgtgttgagtttgatactcttgtgt 24986282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 406
Target Start/End: Complemental strand, 12753666 - 12753350
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    |||||||||||||||||||  |||||||||||||| | || ||  | ||||  ||| ||| |||||||||||| |||||| |||||||| ||||||||      
T  12753666 gttcctaaagatgttcctactttttaggactttcctttttggtact-gattcgtgtgttgcagatcagctggacgatctgctttgttctaaagcccaaac 12753568  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttt 288  Q
     |  ||||| |||||| ||||||||||||| |   ||||| ||||||||| |||  | ||||||||| |||  |||||||  ||||| ||||||||||||    
T  12753567 cgtttatttgacccgtattgcttcagtatatattcaagacttcaagacctaattattcattcaagccgtcaaactaaaaaagtttagtttttagggtttt 12753468  T
Q  289 aagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactg 387  Q
     ||||||  ||||||||| ||||||||| |||||||||||||||||| |  |||||||| |||||||||||||||| | | ||||||||| | |||||||    
T  12753467 tagtctttgtgtgttctactcttgtatcgtgttgatgcaagtttagttctgttttattgtgagcctttcttgtatcatct-tgatacatgctaaggactg 12753369  T
Q  388 tgtgtagagttgtaaactc 406  Q
    | ||| |||||||||||||    
T  12753368 tttgttgagttgtaaactc 12753350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 234 - 441
Target Start/End: Original strand, 15803809 - 15804015
Alignment:
Q  234 gacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagttta 333  Q
    ||||| |||||||||||||||| |||||||||||||| | || ||||||| |||| ||| ||  ||||||||| ||||||||| ||||||||||||||||    
T  15803809 gacctaattgattattcaagccgtcattctaaaaagtct-agattttaggattttgagtatttgtgtgttctactcttgtatcgtgttgatgcaagttta 15803907  T
Q  334 gtacc-ttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaag 432  Q
    || |  |||||||  ||||||||||||||||  || ||||||||||| |||| ||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  15803908 gttctgttttattatgagcctttcttgtatcagtt-tgatacatgttaaggattgtgtgttgagttgtaaactcttgtgtgctacgccaaagcttttaag 15804006  T
Q  433 caaggttgt 441  Q
     ||||||||    
T  15804007 taaggttgt 15804015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 15803612 - 15803803
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||| || ||| ||| |||||||| ||||| ||    
T  15803612 atatctttacagaatcagttatggaatattcctaaagatgtgattatattttaggaaatatttgaagctgtattggacattcataaagatgatcctacat 15803711  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaaccc 202  Q
    ||||||| ||| ||||||||||| ||||| || ||||| ||||||| ||    ||||||||||||||||||| |||||||| ||||| ||||    
T  15803712 tttaggatttttcatatttgtctctgattcctattttgcagatcagttgaccaatctgttttgttctgaagctcaacaagactatttgaccc 15803803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 112 - 337
Target Start/End: Complemental strand, 1626156 - 1625935
Alignment:
Q  112 ttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgctt 211  Q
    |||||||||||| | ||||| | |||||  ||||||||||||||| |||| |||||  |||||| ||||||||||||||  |||||| ||| | ||||||    
T  1626156 ttaggactttccttgtttgt-tctgattcgtgttttgtagatcagatggacgatctactttgttatgaagcccaacaaggttatttagcccatattgctt 1626058  T
Q  212 cagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattctt 311  Q
    |||||||||||||| || ||||||||| |||||||||||||||| |||||   ||||| | ||| |||||||||||| ||||||  |||| |||| ||||    
T  1626057 cagtataaaaggaaaacttcaagacctaattgattattcaagccgtcatttctaaaag-tctag-ttttagggttttgagtctttgtgtg-tctactctt 1625961  T
Q  312 gtatcatgttgatgcaagtttagtac 337  Q
    ||||| ||||||||||||||||||||    
T  1625960 gtatcgtgttgatgcaagtttagtac 1625935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 382
Target Start/End: Original strand, 20840752 - 20841108
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  |||||| |   |||||||||||||||||||||   ||| ||   ||| ||||| | ||||||| | |||||||||||||||    
T  20840752 atcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttcc 20840851  T
Q  124 atatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    |||||||| | |||||  |||||||||||| ||||| |  |||||| ||||| |||||||||||| | | |||||| |||  | | ||||| |||| |||    
T  20840852 atatttgtttctgattcttgttttgtagattagctgaactgatctgctttgtactgaagcccaacta-agtatttagcccaagcttcttcaatatataag 20840950  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-t 321  Q
     || || ||||||||| |||||| ||| ||||| |||| |||||||||||    |||||| ||||| |||||| ||||| | |||||||||||| | | |    
T  20840951 aaatacttcaagacctaattgatcatttaagccgtcatactaaaaagtttagatttttagtgttttgagtctttatgtgctatattcttgtatcgtttgt 20841050  T
Q  322 gatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttag 382  Q
    ||||||||| ||  |||||   ||| ||||||||||| |||| |||||||||| |||||||    
T  20841051 gatgcaagtctataacctt---ttgtgagcctttcttatatcatttgtgatacttgtttag 20841108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 363
Target Start/End: Original strand, 25349837 - 25350038
Alignment:
Q  170 tttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaag 269  Q
    |||||||||||||||||||||  |||| | || || ||||||||||||||||||||||| ||||||||| ||    ||||||||||||||||||||||||    
T  25349837 tttgttctgaagcccaacaaggttattgagcctgtattgcttcagtataaaaggaagacttcaagacctaatcaggtattcaagccatcattctaaaaag 25349936  T
Q  270 ttttagcttttagggttttaagtc---ttc-atgtgt-tctattcttgtatcatgttgatgcaagtttagtac----cttttattgcgagcctttcttgt 360  Q
      |||| |||||||||||| ||||   |||  ||||| |||| ||||||||| |||||||| |||||||||||      ||||||| |||||||||||||    
T  25349937 -attagtttttagggttttgagtcgttttctttgtgtgtctactcttgtatcgtgttgatgtaagtttagtactgtttgtttattgtgagcctttcttgt 25350035  T
Q  361 atc 363  Q
    |||    
T  25350036 atc 25350038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 392
Target Start/End: Complemental strand, 4246632 - 4246341
Alignment:
Q  99 atgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatattt 197  Q
    ||||||| | |||||||||||||| |||||||| | |||||  ||||||| |||| ||||| |  |||||| ||||| |||||||||||| | | |||||    
T  4246632 atgttccgacattttaggactttcaatatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaacta-attattt 4246534  T
Q  198 aacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttca 297  Q
    | |||  | |||||||||||| || |||||| ||||||||| |||| | |||||||||  ||| |||||||| ||||| ||||  || ||| ||||||||    
T  4246533 agcccaagctgcttcagtatataaagaagacttcaagacctaattgttcattcaagccgccatactaaaaag-tttagatttttagggtttgagtcttca 4246435  T
Q  298 tgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    ||| || |  ||||||||| | | |||||||||||||| |   | ||||| | |  |||||||||||||| |||||||  |||||||||||||||||    
T  4246434 tgtattttgctcttgtatcgtttgtgatgcaagtttagaa---tctattgtgtgttctttcttgtatcgtatgtgatatttgtttaggactgtgtgt 4246341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 11667607 - 11667736
Alignment:
Q  283 ggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgttta 381  Q
    |||||| ||||| ||||||||||| | ||||||| | | |||| ||||||||| |||||| |||| || ||||||||||||||||||||||||||||| |    
T  11667607 ggttttgagtctacatgtgttctacttttgtatcgtttgtgattcaagtttagaaccttt-attgtgatcctttcttgtatcgtttgtgatacatgttaa 11667705  T
Q  382 ggactgtgtgtagagttgtaaactcttgtgt 412  Q
    ||||||||||| |||||  | ||||||||||    
T  11667706 ggactgtgtgttgagtttgatactcttgtgt 11667736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 11 - 187
Target Start/End: Original strand, 11667378 - 11667555
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| || ||||||||||||||  |||||| ||  |||||||||||||||||||||   ||||||| |||| ||||||||||||| | | ||    
T  11667378 atatctttacagaataagttgtggaatatttctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttacaacat 11667477  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaac 187  Q
    ||||||| ||||||||||||| | | |||  ||||||| || | ||||| |  |||||| |||||| |||||||||||    
T  11667478 tttaggattttccatatttgtttctaattcttgttttgcaggttagctgaactgatctgctttgttttgaagcccaac 11667555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 269
Target Start/End: Original strand, 20200576 - 20200820
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  |||||| |   |||||||||||||||||||||   ||| ||   ||| ||||| | ||||||| ||||||||||||||||     
T  20200576 atcagttgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccaatattttaggactttct 20200674  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    | |||||| | |||||  ||||||| |||| ||||| |  |||||| ||||| |||||||| ||| | | |||||| ||   | |||||||||||| ||     
T  20200675 aaatttgtatatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcctaacta-agtatttagcctaagctgcttcagtatataac 20200773  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaag 269  Q
    |||||| ||||||| | |||||| ||||||||| |||| ||||||||    
T  20200774 gaagacttcaagacataattgatcattcaagccgtcatactaaaaag 20200820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 13165883 - 13165773
Alignment:
Q  205 gttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttc 304  Q
    |||||||||||||| ||||||||| ||||||| | |||| | ||||||| | |||| |||||||| ||||| ||||  || ||| ||||||||||| |||    
T  13165883 gttgcttcagtatataaggaagacttcaagacataattgttcattcaagtcgtcatactaaaaag-tttagatttttagggtttgagtcttcatgtattc 13165785  T
Q  305 tattcttgtatc 316  Q
    |  |||||||||    
T  13165784 tgctcttgtatc 13165773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 10339711 - 10339860
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| ||||||||||||| || || ||||||||| | |||||   |||||  |||| ||||||||||||| | ||||||  |||| |||||||||| ||    
T  10339711 gttccgaaagatgttcctacatatttggactttccttttttgttactgattcgtgttatgtagatcagctgaacgatctgcattgtgctgaagcccagca 10339810  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacct 238  Q
    ||  |||| | ||  | ||||||||||||| |||||| |  |||||||||    
T  10339811 aggttattgagcctatattgcttcagtatataaggaaaatttcaagacct 10339860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 17850902 - 17850957
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttagga 66  Q
    |||||||| ||| |||||||||| |||| || ||||| ||||||||||||||||||    
T  17850902 atatctttacagaatcagttgtgtaatactcctaaagatgtgattatattttagga 17850957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 1625893 - 1625823
Alignment:
Q  369 tgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    ||||||||||| |||||| | | | |||||||||||||  |||| |||  |||||||||||||||||||||||    
T  1625893 tgatacatgttaaggactatttattgagttgtaaactc--gtgtcctacaccaaagcttttaagcaaggttgt 1625823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 11 - 441
Target Start/End: Original strand, 26328690 - 26329119
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    ||||||||  || |||||||||| ||||||| |||||||||||||||||||||| |||||||| | |||||||| |||| ||||||||||||||  | ||    
T  26328690 atatctttatagaatcagttgtgtaatattcctaaagttgtgattatattttagaaaatatttaatgttgttttggacgctcctaaagatgttctgacat 26328789  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| |||| || ||||    
T  26328790 tttaggactttccatatttgtctctgattcttgttttgcagatcagctggacgatctgttttgttctgaagcccaacaataatatttgacccttgctgct 26328889  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 310  Q
    || ||||||||||||||||||||||||| ||  |  ||||||||| |||||||||| || |||||||||||||||||| ||| | |||||||||||||||    
T  26328890 tcggtataaaaggaagacatcaagacctaatgaaccattcaagccgtcattctaaagag-tttagcttttagggttttgagtatacatgtgttctattct 26328988  T
Q  311 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgt 410  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  26328989 tgtatcatgttgatgcaagtttagtaccttttattgtgagcctttcttgtatcgtttgggatacatgtttaggactgtgtgttgagttgtaaacacttgt 26329088  T
Q  411 gttctatgccaaagcttttaagcaaggttgt 441  Q
    ||||||  |||||||||||||||||||||||    
T  26329089 gttctacaccaaagcttttaagcaaggttgt 26329119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 6 - 441
Target Start/End: Complemental strand, 18221798 - 18221365
Alignment:
Q  6 cacagatatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcc 105  Q
    |||| |||||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||    
T  18221798 cacacatatctttacaggatcagttgtgtaatattcctaaagttgtgattatattttagaaaatatttgaagttgttttggacattcctaaagatgttcc 18221699  T
Q  106 tatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtg 205  Q
    || ||||||||||||||||||||||||| ||||| ||||||   ||||||||||||  |||||||||||||||||| |||| || | ||||| || || |    
T  18221698 tacattttaggactttccatatttgtctatgattcctgtttcacagatcagctggacaatctgttttgttctgaagaccaagaaaattatttgactcgag 18221599  T
Q  206 ttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttct 305  Q
     ||||||| ||||||||||||||| |||||||| |||||| ||||||||   |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  18221598 ctgcttcattataaaaggaagacaacaagacctaattgatcattcaagcggacattctaaaaag-tttagcttttagggttttgagtcttcatgtgttct 18221500  T
Q  306 attcttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaact 405  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  18221499 attcttgtatcatgttgatgcaagtttagtaccttttattgtgagtctttcttgtatcatttgcgatacatgtttaggactgtgtgtagagttg-aaact 18221401  T
Q  406 cttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    |||||||| || |  |||||||||||| || |||||    
T  18221400 cttgtgttttacgataaagcttttaagaaaagttgt 18221365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 43 - 441
Target Start/End: Complemental strand, 23624523 - 23624132
Alignment:
Q  43 taaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttct 142  Q
    ||||||||||||||||||||||||||||||    |||||||| || ||||||||||||||||||| ||||||||||||| | | ||||||| ||||| ||    
T  23624523 taaagttgtgattatattttaggaaatatt----gttgttttggaagttcctaaagatgttcctacattttaggacttttcttttttgtctctgattcct 23624428  T
Q  143 gttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgatt 242  Q
    |||||| ||||||||| || |||||||||||| |||||||||||||||| ||||| ||||| | |||||||||||| || | |||| ||||||||| ||     
T  23624427 gttttgcagatcagctagacgatctgttttgtactgaagcccaacaagagtatttgacccgagctgcttcagtatataaaggagacttcaagacctaatg 23624328  T
Q  243 gattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtacctttt 342  Q
     | |||||||||| |||||||||||||||| |||||||||||||    |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  23624327 aactattcaagccgtcattctaaaaagttt-agcttttagggttgg--gtctacatgtgttctattcttgtatcatgttgatgcaagtctagtacctttt 23624231  T
Q  343 attgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  23624230 attgtgagcctttcttgtatcgtttgtgatacatgctaaggactgtgtgtagagttgtaaactcttgtgttctacgaaaaagcttttaagcaaggttgt 23624132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 438
Target Start/End: Original strand, 30605166 - 30605593
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgtttta-gacgttcctaaagatgttcctata 109  Q
    |||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||||||||| | |    
T  30605166 atatctttacagaatcagttgtggaatattcctaaagttgtgtttatattttaggaaatatttgaagttgttttgtgacgatcctaaagatgttccgaca 30605265  T
Q  110 ttttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    || ||||||||||||||||||| | | |||  ||||||| ||||||| |||| ||||||||||||||||||||||||||||  ||||| ||  | |||||    
T  30605266 ttataggactttccatatttgtttctaattcttgttttgcagatcagttggacgatctgttttgttctgaagcccaacaagtttatttgacttgagttgc 30605365  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    ||||||||| |||| |||| ||||||||| ||  | |||||||||| | ||||||||||||||    |||||||||||| ||| | ||||||||||| ||    
T  30605366 ttcagtatataagggagacttcaagacctaatgaactattcaagccgtaattctaaaaagtttagatttttagggttttgagtatacatgtgttctactc 30605465  T
Q  310 ttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttg 409  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||  |||||||  | ||||    
T  30605466 ttgtatcatgttgatgcaagtttagtacc-tttattgtgagcctttcttgtgtcgtttgtgatacatgttaaggactgtgtgttaagttgtattcacttg 30605564  T
Q  410 tgttctatgccaaagcttttaagcaaggt 438  Q
    ||| |||  ||||||||| ||||||||||    
T  30605565 tgtactacaccaaagcttgtaagcaaggt 30605593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 24 - 426
Target Start/End: Original strand, 22082179 - 22082578
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||   ||||||| |||| ||||||||||||||  | |||||| ||||||||    
T  22082179 atcagttgtggaatattcctaaagtagtgtttatattttaggaaatatttgttattgttttggacgatcctaaagatgttctgacattttaagactttcc 22082278  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaagg 223  Q
    |||||||||| |||||  ||||||| | |||||||||| |||||||||||||||| || ||||||| | ||||| ||||| | ||||| |||||| ||||    
T  22082279 atatttgtctctgattcttgttttgcatatcagctggacgatctgttttgttctggagtccaacaa-agtatttgacccgagctgctttagtatataagg 22082377  T
Q  224 aagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttga 323  Q
     |||| |||| |||| |||||  ||||||||  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||    
T  22082378 gagacttcaaaacctaattgagcattcaagctgtcattctaaaaag-tttagcttttagagttttgagtctacatgtgttctatttttgtatcatgttga 22082476  T
Q  324 tgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaa 423  Q
    ||||| ||||||||| ||||||  || |||||||||| |||||||||||||||||| | |||||| ||| ||||||||||||| ||||| |||  |||||    
T  22082477 tgcaaatttagtacc-tttattatgaacctttcttgtgtcgtttgtgatacatgttaatgactgtatgttgagttgtaaactcatgtgtactacaccaaa 22082575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 358
Target Start/End: Complemental strand, 38406045 - 38405698
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||||||||||| ||||||  || ||||||||||||||||||||    ||||||| |||| ||||||| ||| ||| | ||    
T  38406045 atatctttacagaatcagttgtggaatattcctaaagtaatgtttatattttaggaaatattttttattgttttggacgatcctaaaaatgatccgacat 38405946  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||| ||||| ||||||||||||||||||||| ||| ||||||||| ||||  | ||||    
T  38405945 tttaggactttccatatttgtctctgattcttgttttgcagatcatctggacgatctgttttgttctgaagccaaactagaatatttgacccaagatgct 38405846  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattct 310  Q
    |||||||| ||||||||| ||||||| | ||||| |||||||||| ||||||||||||||||    |||||| ||||| ||||| |||||| |||| |||    
T  38405845 tcagtatataaggaagacttcaagacttaattgagtattcaagccttcattctaaaaagtttagatttttagtgttttgagtctacatgtgctctactct 38405746  T
Q  311 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttctt 358  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  38405745 tgtatcatgttgatgcaagtttataaccttttattgtgagcctttctt 38405698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 156 - 441
Target Start/End: Complemental strand, 13339125 - 13338843
Alignment:
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagcc 255  Q
    |||||| ||| |||||||| |||||||||||||| | ||||| |||||| ||| ||||| ||||||| ||||||||||||||| |||  ||||||||| |    
T  13339125 gctggatgatatgttttgtgctgaagcccaacaaaattatttgacccgtattgtttcagcataaaagcaagacatcaagacctaattagttattcaagac 13339026  T
Q  256 atcatt-ctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtaccttttattgcgagcctt 354  Q
     | ||| |||||| | |  || |||||||||||| ||||||  ||||||||  ||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  13339025 gttatttctaaaaggct--ag-ttttagggttttgagtctttgtgtgttcttctcttgtatcgtgttgatgcaagtttagtaccttttattgtgagtctt 13338929  T
Q  355 tcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    |||| ||||  || ||||||||||| |||||||||| | ||||||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  13338928 tcttatatcagtt-tgatacatgttaaggactgtgttttgagttgtaaactcttgtgtgctacgccaaagctgttaagtaaggttgt 13338843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 11 - 293
Target Start/End: Complemental strand, 26037462 - 26037181
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||  |||||||||||||||||| |||||| ||  |||||||||||||||||||||   ||||||| |||| ||||||||||||||| | ||    
T  26037462 atatctttacaaaatcagttgtggaatattcctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacat 26037363  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||||||||||||| | ||| |||||||||| |||| ||||| |  |||||  |||||||||||||| ||| | | ||||| ||||| | |||    
T  26037362 tttaggactttccatatttgt-tctga-ttctgttttgcagattagctgaactgatcttctttgttctgaagccaaactaaagtatttgacccgagctgc 26037265  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtc 293  Q
    ||||||||| |||| |||| ||||||||| ||  | |||||||||| ||||||||||||||||    |||||||||||| ||||    
T  26037264 ttcagtatataagggagacttcaagacctaatgaactattcaagccgtcattctaaaaagtttagatttttagggttttgagtc 26037181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 388
Target Start/End: Original strand, 23757727 - 23758107
Alignment:
Q  6 cacagatatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcc 105  Q
    |||| ||||||||| || || || |||||||||||  |||||| |   |||||||||||||||||||||   ||| ||   ||| ||||| | |||||      
T  23757727 cacacatatctttggagaattagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgtttt 23757826  T
Q  106 tatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgt 204  Q
     | |||||||||||||||| |||||| |  | ||  ||||| | |||| ||||| |  |||||| |||||  ||||||||||| | | |||||| |||      
T  23757827 gacattttaggactttccagatttgtttcgggttcttgtttggcagattagctgaaccgatctgctttgtgttgaagcccaacta-agtatttatcccaa 23757925  T
Q  205 gttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttc 304  Q
    | |||||||||||| || ||||||  |||||||| |||||| ||||||||  |||| |||||||||||    |||||||||||| |||||| ||||| ||    
T  23757926 gctgcttcagtatataaagaagactacaagacctaattgatcattcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctc 23758025  T
Q  305 tattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    |||||||||||| | | |||||||||| ||| |||||   ||| ||| |||||||||||||| |||||||| |||||||||||||    
T  23758026 tattcttgtatcgtttgtgatgcaagtctagaacctt---ttgtgagtctttcttgtatcgtctgtgatacttgtttaggactgt 23758107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 388
Target Start/End: Original strand, 23823183 - 23823563
Alignment:
Q  6 cacagatatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcc 105  Q
    |||| ||||||||| || || || |||||||||||  |||||| |   |||||||||||||||||||||   ||| ||   ||| ||||| | |||||      
T  23823183 cacacatatctttggagaattagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgtttt 23823282  T
Q  106 tatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgt 204  Q
     | |||||||||||||||| |||||| |  | ||  ||||| | |||| ||||| |  |||||| |||||  ||||||||||| | | |||||| |||      
T  23823283 gacattttaggactttccagatttgtttcgggttcttgtttggcagattagctgaaccgatctgctttgtgttgaagcccaacta-agtatttatcccaa 23823381  T
Q  205 gttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttc 304  Q
    | |||||||||||| || ||||||  |||||||| |||||| ||||||||  |||| |||||||||||    |||||||||||| |||||| ||||| ||    
T  23823382 gctgcttcagtatataaagaagactacaagacctaattgatcattcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctc 23823481  T
Q  305 tattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    |||||||||||| | | |||||||||| ||| |||||   ||| ||| |||||||||||||| |||||||| |||||||||||||    
T  23823482 tattcttgtatcgtttgtgatgcaagtctagaacctt---ttgtgagtctttcttgtatcgtctgtgatacttgtttaggactgt 23823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 392
Target Start/End: Original strand, 23420045 - 23420413
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||||||||||  |||||| ||  ||||||||||||||||||||    ||| ||   ||| ||||| | ||||||| | ||||||||||||||     
T  23420045 atcagttgtggaatatttctaaagtagtttttatattttaggaaatatttattattggttggaacgatcctataaatgttccgacattttaggactttca 23420144  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
     ||||||| | |||||  ||||||| |||| ||||| |  |||||| |||||||||||||||||| | | |||||| |||  | | |||||||||  ||     
T  23420145 gtatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgttctgaagcccaacta-attatttagcccaagctacttcagtatgtaaa 23420243  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-t 321  Q
     ||||| ||||||||| |||| | ||||||||| |||| |||||||| ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | | |    
T  23420244 aaagacttcaagacctaattgctcattcaagccgtcatactaaaaag-tttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgt 23420342  T
Q  322 gatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    ||||||||||||| | || ||| || | |  |||| |||||||||||||||||| || |||||| |||||||    
T  23420343 gatgcaagtttagaatctcttactgtgtgttctttattgtatcgtttgtgatacttg-ttaggagtgtgtgt 23420413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 337
Target Start/End: Original strand, 20714295 - 20714540
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| |||||||||||||  | |||||||||||| |||||||   |||||  | |||||||||| ||||||| |||||  |||||| | ||||||||      
T  20714295 gttccgaaagatgttcctacttcttaggactttccttatttgttactgattcgtattttgtagattagctggacgatctactttgttttaaagcccaaac 20714394  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttt 288  Q
    ||  ||  |  ||| | ||||||||||||| ||||||||| ||||||||| ||||| ||||||| || |||||   ||||| | ||| ||||||||||||    
T  20714395 aggttaaatgccccat-ttgcttcagtatataaggaagacttcaagacctaattgaatattcaaaccgtcatttctaaaag-tctagtttttagggtttt 20714492  T
Q  289 aagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac 337  Q
     ||| ||  |||| |||| ||||||||| ||||||||||||||||||||    
T  20714493 gagtttttgtgtg-tctactcttgtatcgtgttgatgcaagtttagtac 20714540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 334
Target Start/End: Complemental strand, 24190504 - 24190222
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  || |||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  24190504 ttatattttaggaaatatttaatattttttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagat 24190405  T
Q  154 ca-gctggaa-gatctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
     | |||| |  ||||||  ||||| |||||||||||||  | |||||| |||  | |||||||||||| ||||||||| ||||||||| |||| | ||||    
T  24190404 taagctgaaccgatctgcattgttactgaagcccaacat-attatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattc 24190306  T
Q  251 aagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    ||||| |||| |||||||||||    |||||||||||| ||||||||||| ||||  | ||||||| | | ||||||||||||||    
T  24190305 aagccgtcatactaaaaagtttagatttttagggtttt-agtcttcatgtattctgcttttgtatcgtttgtgatgcaagtttag 24190222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 392
Target Start/End: Original strand, 22404434 - 22404615
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||  |||||| ||||  || ||| ||||||||| | || |     
T  22404434 tgcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaa--ttttagatttttagggtttgagtcttcatttattatg 22404531  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
     ||||||||||| | |||||||||||||| | ||  || || |   ||||||||||||||||||||||| || ||||||||||||||    
T  22404532 ctcttgtatcatttgtgatgcaagtttagaatctacta-tgtg-ttctttcttgtatcgtttgtgatacttg-ttaggactgtgtgt 22404615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 438
Target Start/End: Complemental strand, 26037168 - 26037070
Alignment:
Q  340 tttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggt 438  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||| || ||||||| || |||  || ||| ||||| |||||||    
T  26037168 tttattgtgagcctttcttgtatcgtctttgatacatgtttaggactgtgtgttgagttttatactcttgggtactacaccgaagattttacgcaaggt 26037070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 261
Target Start/End: Original strand, 13941561 - 13941732
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| |||||||||||||  | |||| ||||||| |||||||   |||||  | || ||||||||||||| | |||||  |||||||||||||||||||    
T  13941561 gttccgaaagatgttcctacttcttag-actttccttatttgttactgattcgtattatgtagatcagctgaacgatctactttgttctgaagcccaaca 13941659  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcatt 261  Q
    ||  || ||| | | | ||||||| ||||||||||||||| ||||||||| |||   |||||||||| |||||    
T  13941660 aggttaattagctcatattgcttccgtataaaaggaagacttcaagacctaattaggtattcaagccgtcatt 13941732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 25105117 - 25105242
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||  | |||||||||||||||||||||    |||| ||||  || ||| ||||||||||| |||||    
T  25105117 tgcttcagtatataaggaagacttcaagacctaatttttcattcaagccatcattctaaaag---ttagatttttagggtttgagtcttcatgtattcta 25105213  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  25105214 ctcttgtatcgtttgtgatgcaagtttag 25105242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 25164210 - 25164335
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||  | |||||||||||||||||||||    |||| ||||  || ||| ||||||||||| |||||    
T  25164210 tgcttcagtatataaggaagacttcaagacctaatttttcattcaagccatcattctaaaag---ttagatttttagggtttgagtcttcatgtattcta 25164306  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  25164307 ctcttgtatcgtttgtgatgcaagtttag 25164335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 9422034 - 9422251
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    ||||||||||||||||||||    ||| ||   ||| ||||| | ||||||| | |||||||||||||| |  ||||| | |||||  ||||||| ||||    
T  9422034 ttatattttaggaaatatttattattggttggaacgatcctataaatgttccaacattttaggactttctagttttgtttctgattcttgttttgcagat 9422133  T
Q  154 cagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaa 252  Q
     ||||| |  |||||| ||||| |||||| ||||| | | |||||| |||    |||||||||||| ||||||||| |||| |||| |||| ||||||||    
T  9422134 tagctgaaccgatctgctttgtgctgaagtccaacta-agtatttagcccaaactgcttcagtatataaggaagacttcaatacctaattg-ttattcaa 9422231  T
Q  253 gccatcattctaaaaagttt 272  Q
    ||| ||||||||||||||||    
T  9422232 gccgtcattctaaaaagttt 9422251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 22245877 - 22246091
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| |||||||   |||||| ||||    
T  22245877 ttatattttaggaaatatttaatattgtttggaacgatcctatacatgttccgacattttaggactttccagatttgtttttgattctcgttttgcagat 22245976  T
Q  154 cagctggaa--gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattca 251  Q
     |  | |||  ||||||  || | |||||||||||| ||  |||||| |||  | ||||  |||||| ||||||||| ||||||||| |||| | |||||    
T  22245977 taagttgaaccgatctgcattttgctgaagcccaacgag-ttatttagcccaagctgctatagtatataaggaagacttcaagacctaattgttcattca 22246075  T
Q  252 agccatcattctaaaa 267  Q
    || | |||||||||||    
T  22246076 agtcgtcattctaaaa 22246091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 22251713 - 22251773
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||||| |||||||||||    
T  22251713 tgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcattctaaaa 22251773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 22184409 - 22184503
Alignment:
Q  343 attgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggt 438  Q
    |||| ||||||||||| |||| | | ||||||||||| |||| ||| | | ||||||||||||||||||| |||  ||||||||| ||||||||||    
T  22184409 attgtgagcctttcttttatcatct-tgatacatgttaaggattgtttattgagttgtaaactcttgtgtgctacaccaaagcttgtaagcaaggt 22184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 25104978 - 25105077
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  25104978 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagat 25105077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 25164071 - 25164170
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  25164071 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagat 25164170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 20740543 - 20740585
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  20740543 gttcctaaagatgttcctactttttaggagtttccatatttgt 20740585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 32 - 371
Target Start/End: Original strand, 15699832 - 15700169
Alignment:
Q  32 tggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  15699832 tggaatattcctaaagttgtgttcatattttaggaaatatttgaagttgttttggacgctcctaaagatgttcctacattttaggactttccatatttgt 15699931  T
Q  132 ctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatc 231  Q
    || |||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||| |||| | || ||    
T  15699932 ctctgattcttgttttgcagatcagctggacgatctgttttgttctgaagcccaacaagagtatttgacccgagctgcttcagtatataagggaaacttc 15700031  T
Q  232 aagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtt 331  Q
    ||||||| ||  |  |||||| |  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  15700032 aagacctaatgaaccattcaatctgtcattctaaaaag-tttagcttttagggttttgagtctacatgtgttctattcttgtatcatgttgatgcaagtt 15700130  T
Q  332 tagtaccttttattgcgagcctttcttgtatcgtttgtga 371  Q
    |||||||  |||||| ||||||||||||||||||||||||    
T  15700131 tagtacc-cttattgtgagcctttcttgtatcgtttgtga 15700169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 406
Target Start/End: Original strand, 19183159 - 19183553
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||| ||||||| ||||| |||||| ||||||||| ||||||||||||||||||| || ||||||||||||  ||||| ||    
T  19183159 atatcttttcagaatcagttgtgtaatattcctaaagatgtgatcatattttagaaaatatttgaagttgttttggatgttcctaaagatcctcctacat 19183258  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctg-ttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||| ||||||||||| ||| ||||| ||||||||||||||||| ||| ||  |||||||||||||||||||||  || ||  | ||| ||||    
T  19183259 tttaggactttacatatttgtctctga-ttctggtttgtagatcagctggacgatttgcatttgttctgaagcccaacaaggttaattggctcgtattgc 19183357  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    |||||||| |||||||||||||||||||| |||||| ||||||| | ||||||||||||| ||||| || |||||||||  |||||  ||||||||||||    
T  19183358 ttcagtatgaaaggaagacatcaagacctaattgatcattcaagacgtcattctaaaaag-tttagtttgtagggttttgtgtctttgtgtgttctattc 19183456  T
Q  310 ttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||||| |||||||||||||||||| |  |||||||| |||||||||||||||| | | ||||||||| | |||||||| ||| |||||||||||||    
T  19183457 ttgtatcgtgttgatgcaagtttagttctgttttattgtgagcctttcttgtatcatct-tgatacatgctaaggactgtttgttgagttgtaaactc 19183553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 412
Target Start/End: Original strand, 15161959 - 15162361
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| ||||| |||||||||||  |||||| ||  |||||||||||||||||||||   ||| ||  ||  ||||||||||||  || | ||    
T  15161959 atatctttacagaatcagctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattggttgggagattcctaaagatgacccgacat 15162058  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaag-atctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||||||||||| | | |||||  ||||||| | || | ||| |   ||||| ||||| |||||||||||| | | |||||| |||  | |||    
T  15162059 tttaggactttccatatttttttatgattcatgttttgcaaattaactgaacctatctgctttgtgctgaagcccaactaaagtatttagcccaagctgc 15162158  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    ||||||||| |||| |||| ||||||||| |||||||||||||||||||||||||||||||||    |||||| ||||||||||| |||||| |||| ||    
T  15162159 ttcagtatataagggagacttcaagacctaattgattattcaagccatcattctaaaaagtttagatttttagagttttaagtctacatgtgctctactc 15162258  T
Q  310 ttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    ||||||| | | |||||||||||||| ||| |||| || || ||||||||||||||||||||||||||| |||||||||||||| |||||  | ||||||    
T  15162259 ttgtatcgtttatgatgcaagtttagaacc-tttagtgtgatcctttcttgtatcgtttgtgatacatgcttaggactgtgtgttgagtttgatactctt 15162357  T
Q  409 gtgt 412  Q
    ||||    
T  15162358 gtgt 15162361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 91 - 412
Target Start/End: Complemental strand, 10724866 - 10724544
Alignment:
Q  91 tcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaa 189  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||||||  ||||||| |||| ||||| |  |||||| ||||| | |||||||||| |    
T  10724866 tcctaaagatgttctgacattttaggactttccatatttgtttttgattcttgttttgcagattagctgaaccgatctgctttgtgccgaagcccaacta 10724767  T
Q  190 gaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttta 289  Q
     | |||||| |||  |||||||||||||| |||| |||| ||||||||| |||||| ||| ||||| ||||||| |||||| |    ||||||||||||     
T  10724766 aagtatttagcccaagttgcttcagtatataagggagacttcaagacctaattgatcatttaagccgtcattctgaaaagtgtagatttttagggttttg 10724667  T
Q  290 agtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    ||||| |||||| |||| ||||||||| | | |||||||||||||| ||| ||||| | |||||||||||| ||| |||||||||||| |||||||||||    
T  10724666 agtctacatgtgctctactcttgtatcgtttgtgatgcaagtttaggacc-tttatagtgagcctttcttgcatcatttgtgatacatatttaggactgt 10724568  T
Q  389 gtgtagagttgtaaactcttgtgt 412  Q
    |||| |||||  | ||||||||||    
T  10724567 gtgttgagtttgatactcttgtgt 10724544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 91 - 412
Target Start/End: Complemental strand, 10938635 - 10938313
Alignment:
Q  91 tcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaa 189  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||||||  ||||||| |||| ||||| |  |||||| ||||| | |||||||||| |    
T  10938635 tcctaaagatgttctgacattttaggactttccatatttgtttttgattcttgttttgcagattagctgaaccgatctgctttgtgccgaagcccaacta 10938536  T
Q  190 gaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttta 289  Q
     | |||||| |||  |||||||||||||| |||| |||| ||||||||| |||||| ||| ||||| ||||||| |||||| |    ||||||||||||     
T  10938535 aagtatttagcccaagttgcttcagtatataagggagacttcaagacctaattgatcatttaagccgtcattctgaaaagtgtagatttttagggttttg 10938436  T
Q  290 agtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    ||||| |||||| |||| ||||||||| | | |||||||||||||| ||| ||||| | |||||||||||| ||| |||||||||||| |||||||||||    
T  10938435 agtctacatgtgctctactcttgtatcgtttgtgatgcaagtttaggacc-tttatagtgagcctttcttgcatcatttgtgatacatatttaggactgt 10938337  T
Q  389 gtgtagagttgtaaactcttgtgt 412  Q
    |||| |||||  | ||||||||||    
T  10938336 gtgttgagtttgatactcttgtgt 10938313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 441
Target Start/End: Complemental strand, 15622961 - 15622691
Alignment:
Q  170 tttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatc-attctaaaaa 268  Q
    |||||||||||||||||||||  |  ||| ||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||  |||||||||    
T  15622961 tttgttctgaagcccaacaaggtttattaccccgtattgcttcagtataaaaggaggacttcaagacctaattgattattcaagccgtcgtttctaaaaa 15622862  T
Q  269 gttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagta----ccttttattgcgagcctttcttgtatcg 364  Q
    | ||||| |||||||||||| ||||||  |||| |||| ||||||||| |||||||||||||||||||       ||||||| ||||||| ||||||||     
T  15622861 g-tttag-ttttagggttttgagtctttgtgtg-tctactcttgtatcgtgttgatgcaagtttagtattgtttgtttattgtgagccttgcttgtatc- 15622766  T
Q  365 tttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    ||  ||||||||||| |||||||| |||  |||||| ||||| | ||| |||  |||||||||||||||||||||||    
T  15622765 ttcttgatacatgttaaggactgtttgtttagttgt-aactcat-tgtgctacaccaaagcttttaagcaaggttgt 15622691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 95 - 441
Target Start/End: Complemental strand, 19660035 - 19659693
Alignment:
Q  95 aaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaata 194  Q
    |||||||||||||  |||||||||||||| |||||||   |||||  |||||| |||||||| |||| |||||  |||||||||||||| || |||  |     
T  19660035 aaagatgttcctactttttaggactttccttatttgttactgattcatgttttatagatcagttggacgatctactttgttctgaagcctaataaggttt 19659936  T
Q  195 tttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtct 294  Q
     ||| ||| | ||  ||||   |||||||||||| ||||||||| |||   |||||||||| |||||||||||||||| || |||||||||||| |||||    
T  19659935 gttagcccatattatttca---taaaaggaagacttcaagacctaattatgtattcaagccgtcattctaaaaagttt-agtttttagggttttgagtct 19659840  T
Q  295 tcatgtgttctattcttgtatcatgttgatgcaagtttagtac-ctttta-ttgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |  ||||||||| ||||||||  |||||||||||||||||| |  ||||| ||| ||||||||||| |||| | | || |||||| | ||||||||||||    
T  19659839 ttgtgtgttctactcttgtattgtgttgatgcaagtttagtcctgttttatttgtgagcctttcttatatcatct-tggtacatggtaaggactgtgtgt 19659741  T
Q  393 agagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
     |  |||||||||| | ||| |||  |||||||||| ||||||||||||    
T  19659740 tggattgtaaactcat-tgtgctacaccaaagctttgaagcaaggttgt 19659693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 406
Target Start/End: Complemental strand, 9069466 - 9069234
Alignment:
Q  174 ttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagtttt 273  Q
    |||||||||||||||||| ||||| | |||| || ||||| |||| ||  ||||| ||||||||| |||  | |   ||||| |||  |||||||| |||    
T  9069466 ttctgaagcccaacaagactatttgaaccgtattacttcaatatataaacaagacttcaagacctaatttgtcaccgaagccgtcaaactaaaaaggttt 9069367  T
Q  274 agcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgat 372  Q
    || |||||||||||| ||||||  || |||||| ||||||||| |||||||||||||||||| |  |||||||| |||||||||||||||| | | ||||    
T  9069366 agtttttagggttttgagtctttgtgcgttctactcttgtatcgtgttgatgcaagtttagtcctgttttattgtgagcctttcttgtatcatct-tgat 9069268  T
Q  373 acatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||| | || ||||| ||| |||||||||||||    
T  9069267 acatgctaagaactgtttgttgagttgtaaactc 9069234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 89 - 363
Target Start/End: Complemental strand, 33746523 - 33746249
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| |||||||||| ||  |||||||||||||| | || ||  | ||||  ||| ||| |||||||||||  |||||| |||||||||||||||||      
T  33746523 gttccaaaagatgttcttactttttaggactttcctttttggtgct-gattcgtgtgttgcagatcagctgggcgatctgatttgttctgaagcccaaac 33746425  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttt 288  Q
     |  ||||| |||  | ||||||||||||| |   ||||| ||||||||| |||  | ||||||||| |||  |||||||| ||||| ||||| ||||||    
T  33746424 cgtttatttgacctatattgcttcagtatatattcaagacttcaagacctaattattcattcaagccgtcaaactaaaaaggtttagtttttaaggtttt 33746325  T
Q  289 aagtcttcatgtgttctattcttgtatcatgttgatgcaagtttag-taccttttattgcgagcctttcttgtatc 363  Q
     ||||||  ||||||||  ||||||||  ||||||||||||||||| |   |||||||| ||||||||||||||||    
T  33746324 gagtctttgtgtgttctcctcttgtattgtgttgatgcaagtttagctctgttttattgtgagcctttcttgtatc 33746249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 207 - 392
Target Start/End: Complemental strand, 16384377 - 16384196
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    ||||| |||||| ||| || || ||||||||| ||||||||||||||||||||||||||||   ||||| ||||  || ||||| ||||||||| ||||     
T  16384377 tgctttagtatataagaaatacttcaagacctaattgattattcaagccatcattctaaaa--gtttagatttttagggtttaactcttcatgtattctg 16384280  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
     ||||||||| | | |||||||||||||| |   | ||||| | |  |||||||||||||| |||||||| || ||||||||||||||    
T  16384279 ctcttgtatcgtttgtgatgcaagtttagaa---tctattgtgtgttctttcttgtatcgtctgtgatacttg-ttaggactgtgtgt 16384196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 28019791 - 28019729
Alignment:
Q  205 gttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||||| ||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  28019791 gttgcttcagtatataaggaagacttcaagacctaattgtttattcaagccgtcattctaaaa 28019729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 25117342 - 25117282
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| |||| | |||||||||||||||||||||    
T  25117342 tgcttcagtatataaggaagacttcaagacctaattgttaattcaagccatcattctaaaa 25117282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 261
Target Start/End: Complemental strand, 32862251 - 32862080
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||||||||| ||||  |  ||||||||||||||||||||||   |||||  ||||  ||| |||||||| | |||||   ||||||||||| ||||||    
T  32862251 gttcctaaagaagttctcaccttttaggactttccatatttgttactgattcttgttacgtaaatcagctgaacgatctacattgttctgaag-ccaaca 32862153  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcatt 261  Q
    |   |||| | ||| | ||||||||| ||| ||||||||| ||||||||| |||| | ||||||||| |||||    
T  32862152 aagttattaagcccatattgcttcaggatataaggaagacttcaagacctaattgttcattcaagccgtcatt 32862080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 10197878 - 10197925
Alignment:
Q  171 ttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtata 218  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  10197878 ttgttctgaagcccaacaagactatttagcccgtattgcttcagtata 10197925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 392
Target Start/End: Complemental strand, 10191373 - 10191192
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    ||||||| |||| ||||||||| ||||||||| |||  | ||||||||| |||||||||||   ||||| ||||  || ||| ||||||||||| ||||     
T  10191373 tgcttcactatataaggaagacttcaagacctaattattcattcaagccgtcattctaaaa--gtttagatttttagggtttgagtcttcatgtattctg 10191276  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
     ||||||||| | | |||||||||||||| |   | ||||| | |  |||||||||||||| |||||||| || ||||||||||||||    
T  10191275 ctcttgtatcgtttgtgatgcaagtttagaa---tctattgtgtgttctttcttgtatcgtctgtgatacttg-ttaggactgtgtgt 10191192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 334
Target Start/End: Original strand, 23399714 - 23399994
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||  | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  23399714 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttctgacattttaggactttccaaatttgtttctgattcttgttttgcagat 23399813  T
Q  154 ca-gctggaa-gatctgttttgttc-tgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
     | |||| |  ||||||  |||||  ||||||||||||  | |||||| ||   |||||||||||||| ||||||||| ||||||||| |||| | ||||    
T  23399814 taagctgaaccgatctgcattgttagtgaagcccaacat-attatttagcctaagttgcttcagtatataaggaagacttcaagacctaattgttcattc 23399912  T
Q  251 aagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    || |  |||||||||||   ||||| ||||  || ||  ||||||||||| ||||  ||||||||| | | ||||||||||||||    
T  23399913 aaactgtcattctaaaa---tttagatttttagggttcgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 23399994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 41786040 - 41785891
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    |||||||||  |||||||| ||||||  |||||| ||||||||   |||||  ||||   ||||||| ||| | |||||   ||||||||||||||| ||    
T  41786040 gttcctaaatttgttcctacattttataactttctatatttgttactgattcttgttacatagatcatctgaaggatcttcattgttctgaagcccagca 41785941  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacct 238  Q
    |   |||||| ||| ||||||||||| ||| ||||||||| |||||||||    
T  41785940 aagttatttagcccatgttgcttcagaatataaggaagacttcaagacct 41785891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 31971520 - 31971478
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  31971520 gttcctaaagatgttcctactttttaggagtttccatatttgt 31971478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 33898681 - 33898741
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    ||||||| |||| ||||||||| ||||||||| |||| | ||||||||  |||||||||||    
T  33898681 tgcttcactatataaggaagacgtcaagacctaattgttcattcaagctgtcattctaaaa 33898741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 412
Target Start/End: Complemental strand, 28051825 - 28051421
Alignment:
Q  12 tatctttgcaggatcagttgtggaatattcttaaagttgtgattatat----tttaggaaatatttgaagttgttttagacgttcctaaagatgttccta 107  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||    ||||||||||||||||||||||||| |||| ||||||||||||||| |    
T  28051825 tatctttacagaatcagttgtggaatattcctaaagttgtgattatatatattttaggaaatatttgaagttgttttggacgctcctaaagatgttccga 28051726  T
Q  108 tattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgtt 207  Q
     ||||||||||||||||||||||| | |||||  ||||||| ||||| | |||| ||||||||||||||||||||  ||||||| ||||| | ||| |||    
T  28051725 cattttaggactttccatatttgtttctgattcttgttttgcagatctgttggacgatctgttttgttctgaagcataacaagattatttgatccgagtt 28051626  T
Q  208 gcttcagtataaaaggaagacatcaagacctgat-tgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    ||||||||||| | |   ||| ||||||||| ||   |  ||||||| | |||||| |||||| ||||||| |||||||||| ||||| |||||||||||    
T  28051625 gcttcagtatatatgagtgacttcaagacctaatgaaacaattcaagacgtcattcaaaaaag-tttagctgttagggttttgagtctacatgtgttcta 28051527  T
Q  307 ttcttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||| ||||    
T  28051526 ttcttgtatcatgttgatgcaagtttattaccttttattgtgagcctttcttgtgtcgtttgtgatacatgttaaggactgtgtgttgagttgtatactc 28051427  T
Q  407 ttgtgt 412  Q
     |||||    
T  28051426 atgtgt 28051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 11 - 406
Target Start/End: Original strand, 21253472 - 21253866
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||    
T  21253472 atatctttacagaatcagttgtgtaatattcctaaagatgtgattatattttaggaaatatttgaagctgttttggacgttcctaaagatgttcttatat 21253571  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgct 210  Q
    |||| |||||||||| ||||||| ||||    |||||| |||| ||||||| |||||| ||||||||||||||||| |||  |  ||| ||| | |||||    
T  21253572 tttatgactttccatttttgtctctgatactggttttgcagattagctggacgatctgctttgttctgaagcccaataaggtttattagcccatattgct 21253671  T
Q  211 tcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgt-tctattc 309  Q
    |||||||| || |||||||||||||||| |||  | ||||||||| ||||||||||||| ||||| || ||||||||| ||||||  ||||| |||| ||    
T  21253672 tcagtatataatgaagacatcaagacctaattattcattcaagccctcattctaaaaag-tttagtttgtagggttttgagtctt-ttgtgtgtctactc 21253769  T
Q  310 ttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    | ||||| ||||||||||||||||||||  |||||||| |||||| |||| |||| | | ||||||||| | |||||||| ||| |||||||||||||    
T  21253770 tagtatcgtgttgatgcaagtttagtactgttttattgtgagcctatcttatatcatct-tgatacatgctaaggactgtttgttgagttgtaaactc 21253866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 12 - 398
Target Start/End: Complemental strand, 296124 - 295749
Alignment:
Q  12 tatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatatt 111  Q
    ||||||| ||| |||||  ||||||||||| ||||||||   |||||||||||||||||||||   ||||||| |||| ||||||||||||||| | |||    
T  296124 tatctttacagaatcagaggtggaatattcctaaagttgcatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacatt 296025  T
Q  112 ttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgctt 211  Q
    |||||||||||||||||||||| |||||  ||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| | |||||    
T  296024 ttaggactttccatatttgtctctgattcttgttttgcagatcaactggacgatctgttttgttctgaagcccaacaagagtatttgacccgagatgctt 295925  T
Q  212 cagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttag-cttttagggttttaagtcttcatgtgttctattct 310  Q
    || ||||     ||||| |||||||       | |||||||| |  ||||||||||| ||||||  ||||||| |||| | ||| |||||| |||| |||    
T  295924 caatata----taagacttcaagac------tagtattcaag-ctgcattctaaaaa-ttttagatttttaggattttgattctacatgtgctctactct 295837  T
Q  311 tgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagtt 398  Q
    | ||||||||||||| |||||||| ||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||| |||||    
T  295836 tatatcatgttgatgtaagtttagaaccttttattgtgagcctttgttgtgtcgtttgtgatacatgttaaggactgtgtgttgagtt 295749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 24 - 392
Target Start/End: Original strand, 18063695 - 18064064
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    ||||| || ||||||||  |||||| ||  |||||||||||||||||||| |  ||||||| |||||| ||||||||||| | | |||||||||||||||    
T  18063695 atcagctgaggaatatttctaaagtagtatttatattttaggaaatatttaatattgttttggacgtttctaaagatgtttcgacattttaggactttcc 18063794  T
Q  124 atatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    |||||||||| | |||  ||||||| |||| ||||  |  |||||| ||||| |||||||||||| |||||||||  |||| | |||||||||||| |||    
T  18063795 atatttgtctctaattcttgttttgcagattagctaaaccgatctgctttgtgctgaagcccaactagaatatttggcccgagctgcttcagtatataag 18063894  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-t 321  Q
    |||||| |||| |||| |||| | ||||||||| |||| |||||||||||    ||||| |||||| |||||| ||||| |||| || |||||| | | |    
T  18063895 gaagacttcaatacctaattgttcattcaagccgtcatactaaaaagtttagatttttacggttttgagtctttatgtgctctactcatgtatcgtttgt 18063994  T
Q  322 gatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    ||||||||||||| |||| |||||| |  || ||||||||||||||||| ||| ||||||||| |||||||    
T  18063995 gatgcaagtttagaacctcttattgtgttcc-ttcttgtatcgtttgtgctacttgtttaggattgtgtgt 18064064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 56 - 406
Target Start/End: Original strand, 17042275 - 17042623
Alignment:
Q  56 atattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatca 155  Q
    ||||||||||||  ||||| | ||||||  || |||||||||||||||||||  |||||||||||||| | || || || ||||  | | ||||||||||    
T  17042275 atattttaggaatcatttggatttgtttg-gaagttcctaaagatgttcctactttttaggactttcctttttggtatt-gattcgtctgttgtagatca 17042372  T
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagcc 255  Q
    |||||| ||| || |||||||| ||||||||   |  ||||| |||||| | ||||||||||| |   ||||| ||||||  | |||  | |||||||||    
T  17042373 gctggacgatttgctttgttcttaagcccaaaccgtttatttgacccgtatagcttcagtatatattcaagacttcaagatttaattattcattcaagcc 17042472  T
Q  256 atcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctt 354  Q
     |||  |||||||||||||| || ||||||||| ||||||  ||||||||| ||||||| | |||||||||||||||||| |  |||||||| |||||||    
T  17042473 gtcaaactaaaaagttttagtttgtagggttttgagtctttgtgtgttctactcttgtaacgtgttgatgcaagtttagttctattttattgtgagcctt 17042572  T
Q  355 tcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||||||| | | ||||||||| | |||||||| ||| |||||||||||||    
T  17042573 tcttgtatcatct-tgatacatgctaaggactgtttgttgagttgtaaactc 17042623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 24 - 373
Target Start/End: Complemental strand, 19634551 - 19634204
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    ||||| |||||||||||  |||||| |  |||||||||||||||||||||    ||||||   | | | ||| | ||||||| | |||||||||||||||    
T  19634551 atcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaatgattctataaatgttccgacattttaggactttcc 19634452  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    | |||||| | |||||  ||||||| || |  |||| |  |||| | ||||| |||||||||||| | | |||||| |||  |||||||||||||| |||    
T  19634451 agatttgtttctgattcttgttttgcaggtttgctgaattgatcagctttgtgctgaagcccaacta-agtatttagcccaagttgcttcagtatataag 19634353  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-t 321  Q
    |||||| ||||||||| |||| | ||||||||| |||| |||||||||||    |||||||||||| |||||| ||||| |||||||||||||| | | |    
T  19634352 gaagacttcaagacctaattgttaattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgtttat 19634253  T
Q  322 gatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgata 373  Q
    ||||||||| ||| |||||   ||| |||||||||||||||||| |||||||    
T  19634252 gatgcaagtctagaacctt---ttgtgagcctttcttgtatcgtctgtgata 19634204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 174 - 406
Target Start/End: Original strand, 6579186 - 6579418
Alignment:
Q  174 ttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagtttt 273  Q
    |||||||||||||||||| ||||| | |||| |||||||| |||| ||  ||||| ||||||||| |||  | |   ||||| |||  |||||||| |||    
T  6579186 ttctgaagcccaacaagactatttgatccgtattgcttcaatatataaacaagacttcaagacctaatttgtcaccgaagccgtcaaactaaaaaggttt 6579285  T
Q  274 agcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgat 372  Q
    || |||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||| |  |||||||| |||||||||||||||| | | ||||    
T  6579286 agtttttagggttttgagtctttgtgtgttctactcttgtatcgtgttgatgcaagtttagtcctgttttattgtgagcctttcttgtatcatct-tgat 6579384  T
Q  373 acatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||| | |||| ||| ||| |||||||||||||    
T  6579385 acatgctaaggattgtttgttgagttgtaaactc 6579418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 207 - 392
Target Start/End: Original strand, 13515267 - 13515450
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    ||||||||| || ||||||||| ||||||| | ||| || ||||||||| |||| |||||||||||    |||||||||||| |||||| ||||| ||||    
T  13515267 tgcttcagtttataaggaagacttcaagacttaatttatcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctcta 13515366  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||||| | | |||||||||| ||| ||||||| |   ||||||||||||||| ||||||||||| |||||||||||||||||    
T  13515367 ttcttgtatcgtttgtgatgcaagtctagaaccttttgt---gagcctttcttgtattgtttgtgatacttgtttaggactgtgtgt 13515450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 89 - 441
Target Start/End: Original strand, 286450 - 286801
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| |||||||||||||  | ||||| |||||  | |||||   |||||  |||||||||||||||||||| |||||  |||||||||||||| ||||    
T  286450 gttccgaaagatgttcctacttcttaggtctttctttttttgttactgattcgtgttttgtagatcagctggacgatctactttgttctgaagcctaaca 286549  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttt 288  Q
    ||  |  ||| | | | |||||| |||||| ||||||||| ||||||||| |||   |||||||||| |||||   || ||| | || ||||||||||||    
T  286550 aggtttattagcacatattgctttagtatataaggaagacttcaagacctaattaggtattcaagccgtcatttctaagagtct-agtttttagggtttt 286648  T
Q  289 aagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtacctttt----attgcgagcctttcttgtatcgtttgtgatacatgtttagga 384  Q
     ||||||  ||||| ||| ||||||||| ||| |||||||||||||||   |||    |||| |||||||||||||||| | | ||||||||||| ||||    
T  286649 gagtctttgtgtgt-ctactcttgtatcgtgtagatgcaagtttagtattgtttgtttattgtgagcctttcttgtatcttct-tgatacatgttaagga 286746  T
Q  385 ctgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaaggttgt 441  Q
    |||||||| |||||||||    |||||  |||  |||||||||||||||||||||||    
T  286747 ctgtgtgttgagttgtaagtcattgtg--ctacaccaaagcttttaagcaaggttgt 286801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 392
Target Start/End: Original strand, 18034550 - 18034753
Alignment:
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttt 288  Q
    |||||||||| |||| | | |||||||||| ||| ||||| ||||||||| |||  | ||||||||| |||| |||||||||||    ||||||||||||    
T  18034550 agaatatttagcccgagcttcttcagtatataagtaagacttcaagacctaatttttcattcaagccgtcatactaaaaagtttagatttttagggtttt 18034649  T
Q  289 aagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactg 387  Q
     |||||| ||||| |||| ||||||||  | | |||||||||||||| |||| ||| |  |  || ||||||||||||||||||||| ||||||||| ||    
T  18034650 gagtctttatgtgctctactcttgtattgtttgtgatgcaagtttagaacctcttactatgttcc-ttcttgtatcgtttgtgatacttgtttaggagtg 18034748  T
Q  388 tgtgt 392  Q
    |||||    
T  18034749 tgtgt 18034753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 334
Target Start/End: Complemental strand, 18548313 - 18548009
Alignment:
Q  30 tgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatattt 129  Q
    |||||||||||  |||||| |  |||||||||||||||||||||    ||||||   ||| ||||  | ||||||| | |||||||||||||||| ||||    
T  18548313 tgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctgtaaatgttccgacattttaggactttccagattt 18548214  T
Q  130 gtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagac 228  Q
    || | |||||  ||||||| |||| ||||| |  ||| || ||||| |||||||||| | | |||||||| |||  | |||||||||||| || ||||||    
T  18548213 gtttctgattcttgttttgcagattagctgaaccgatttgctttgtgctgaagcccatcta-aatatttagcccaagctgcttcagtatataaagaagac 18548115  T
Q  229 atcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgca 327  Q
     |||| |||| |||| | ||||||||| ||||||||||||| ||||| ||||   | ||| ||||||||||| ||||  ||||||||| | | |||||||    
T  18548114 ttcaaaacctaattgttcattcaagccgtcattctaaaaag-tttagatttttaaggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgca 18548016  T
Q  328 agtttag 334  Q
    |||||||    
T  18548015 agtttag 18548009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 316
Target Start/End: Complemental strand, 44453078 - 44452863
Alignment:
Q  99 atgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatattt 197  Q
    ||||||| | ||||||||||||| ||  ||||| | |||||  ||||||| |||| ||||| |  |||||  ||||| |||||||||||| | | |||||    
T  44453078 atgttccgacattttaggacttttcagttttgtttctgattcttgttttgcagattagctgaaccgatctactttgtgctgaagcccaacta-agtattt 44452980  T
Q  198 aacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttca 297  Q
    | |||  | |||||||||||| ||| ||||| ||||||||| |||| ||||||||||| ||||||||||||| ||||| ||||  || ||| ||||||||    
T  44452979 agcccaagctgcttcagtatataagaaagacttcaagacctaattg-ttattcaagccgtcattctaaaaag-tttagatttttagggtttgagtcttca 44452882  T
Q  298 tgtgttctattcttgtatc 316  Q
    ||| ||||  |||||||||    
T  44452881 tgtattctgctcttgtatc 44452863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 13791164 - 13791104
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  13791164 tgcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaa 13791104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 334
Target Start/End: Complemental strand, 24196011 - 24195884
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||||| |||| |||||||| ||||| ||||  || ||| ||||||||||| |||      
T  24196011 tgcttcagtatataaggaagacttcaagacctaattgttcattcaagccgtcatactaaaaag-tttagatttttagggtttgagtcttcatgtattcgt 24195913  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  24195912 ctcttgtatcgtttgtgatgcaagtttag 24195884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 267
Target Start/End: Original strand, 979898 - 980108
Alignment:
Q  56 atattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatca 155  Q
    |||||||||| |||||||  | ||||||  || |||||||||||| ||| || || |||||||||||| |||||||   |||||  |||| |||| ||||    
T  979898 atattttaggtaatatttagatttgtttg-gaagttcctaaagattttcgtacatattaggactttccttatttgttactgattcttgttatgtacatca 979996  T
Q  156 gctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagcc 255  Q
    | || | |||||  |||||| ||||||||||||||  |  | | ||| | ||||||||| ||| ||||||||| ||||||||| |||   ||| ||||||    
T  979997 gttgaacgatctactttgttatgaagcccaacaaggttcatgagcccatattgcttcaggatataaggaagacttcaagacctaatttggtatccaagcc 980096  T
Q  256 atcattctaaaa 267  Q
     |||||||||||    
T  980097 gtcattctaaaa 980108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 23954076 - 23954291
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| | ||| | ||||||| | |||||||||||||||| |||||| |||||||  ||||||| ||||    
T  23954076 ttatattttaggaaatatttaatattgtttggaacgatactataaatgttccgacattttaggactttccagatttgtttttgattcttgttttgcagat 23954175  T
Q  154 ca-gctggaa-gatctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
     | |||| |  |||||   ||||| |||||||||||||  | |||||| |||    |||||||||||| || |||||| ||||||||| |||| | ||||    
T  23954176 taagctgaaccgatctccattgttactgaagcccaacat-attatttagcccaaactgcttcagtatataaagaagacttcaagacctaattgttcattc 23954274  T
Q  251 aagccatcattctaaaa 267  Q
    ||||| |||||||||||    
T  23954275 aagccgtcattctaaaa 23954291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 392
Target Start/End: Original strand, 17135663 - 17135997
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtaga- 152  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | ||||||| |||||||| |||||| |||||||  ||||||| |||     
T  17135663 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttagaactttccagatttgtttttgattcttgttttgaagat 17135762  T
Q  153 tcagctgga-agatctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
    | ||||  |   |||||  ||||| |||||||||||| | | |||||| |||  | |||||||||||| ||  ||||| ||||||||| |||| | ||||    
T  17135763 taagctaaaccaatctgcattgttactgaagcccaacga-attatttagcccaagctgcttcagtatataa-taagacttcaagacctaattgttcattc 17135860  T
Q  251 aagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcga 349  Q
    |||||||||||||||||    |||| ||||  || ||| ||||||||||| ||||  ||||||||| | | |||||||||||||| |   | || || |     
T  17135861 aagccatcattctaaaa---gttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttagaa---tctactgtgt 17135954  T
Q  350 g-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |  ||||||||||||||||||||||| || ||||||||||||||    
T  17135955 gttctttcttgtatcgtttgtgatacttg-ttaggactgtgtgt 17135997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 31650220 - 31650165
Alignment:
Q  163 gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtata 218  Q
    ||||||||||||||||||| ||||||||| |  ||| |||||||||||||||||||    
T  31650220 gatctgttttgttctgaagtccaacaagacttattagcccgtgttgcttcagtata 31650165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 272
Target Start/End: Original strand, 7028589 - 7028809
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  7028589 ttatattttaggaaatattttatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagat 7028688  T
Q  154 cagctggaa--gatctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
     |  | |||  ||||||  || || ||||||||||||   | |||||| |||  | |||||||||| | ||||||||| ||||||||| |||| |||||     
T  7028689 taagttgaaccgatctgcattattactgaagcccaac-gtattatttagcccaagctgcttcagtacataaggaagacttcaagacctaattgtttattt 7028787  T
Q  251 aagccatcattctaaaaagttt 272  Q
    ||||| ||||  ||||||||||    
T  7028788 aagccgtcatattaaaaagttt 7028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 392
Target Start/End: Original strand, 18483045 - 18483226
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||| | |||||||||||   ||||| ||||  || ||| |||||| |||| || |     
T  18483045 tgcttcagtatataaggaagacttcaagacctaattgttcattcaagtcgtcattctaaaa--gtttagatttttagggtttgagtctttatgtattatg 18483142  T
Q  307 ttcttgtatcatgt-tgatgcaagtttagtaccttttattgcgag-cctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
     ||||||||||| | |||||||||||||| |   ||||||| | |  ||||||||||| || |||||||| || ||||||||||||||    
T  18483143 ctcttgtatcatttgtgatgcaagtttagaa---tttattgtgtgttctttcttgtattgtctgtgatacttg-ttaggactgtgtgt 18483226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 267
Target Start/End: Original strand, 1918762 - 1918977
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   | | ||||| | ||| ||| | |||||||||||||||| |||||| |||||||  ||||||| ||||    
T  1918762 ttatattttaggaaatatttaatattgtttggaagggtcctataaatgctccgacattttaggactttccagatttgtttttgattcttgttttgcagat 1918861  T
Q  154 cagctggaag--atctgttttgtt-ctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc 250  Q
     |  | |||   || ||  ||||| |||||||||||||  | |||||| |||  | |||||||||||| ||||||||| | ||||||| |||| | ||||    
T  1918862 taagttgaactaatatgcattgttactgaagcccaacat-attatttagcccaagctgcttcagtatataaggaagactttaagacctaattgttcattc 1918960  T
Q  251 aagccatcattctaaaa 267  Q
    ||||| |||||||||||    
T  1918961 aagccgtcattctaaaa 1918977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 21718720 - 21718800
Alignment:
Q  325 gcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    |||| ||||||||  ||||||| |||||||||||||||| | | ||||||||||| |||||||| | | |||||||||||||    
T  21718720 gcaaatttagtacagtttattgtgagcctttcttgtatcatct-tgatacatgttaaggactgtttattgagttgtaaactc 21718800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 7495501 - 7495543
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  7495501 gttcctaaagatgttcctactttttaggagtttccatatttgt 7495543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 7478735 - 7478776
Alignment:
Q  90 ttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    ||||||||||||||||||  |||||||| |||||||||||||    
T  7478735 ttcctaaagatgttcctactttttaggagtttccatatttgt 7478776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 7495569 - 7495618
Alignment:
Q  169 ttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtata 218  Q
    ||||||||||||||||||||||| | | |||||| | |||||||||||||    
T  7495569 ttttgttctgaagcccaacaagattttataacccatattgcttcagtata 7495618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 17702871 - 17702767
Alignment:
Q  230 tcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaa 328  Q
    ||||| ||| |||| | |||||||||||||| |||||||| ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | | ||||||||    
T  17702871 tcaagccctaattgttcattcaagccatcatactaaaaag-tttagatttttagggtttgagtcttcatgtattctcgtcttgtatcgtttgtgatgcaa 17702773  T
Q  329 gtttag 334  Q
    ||||||    
T  17702772 gtttag 17702767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 15635559 - 15635670
Alignment:
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-t 321  Q
    |||||| |||||| || |||| | ||||||||| |||| |||||||| ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | | |    
T  15635559 gaagacttcaagaactaattgttcattcaagccgtcatactaaaaag-tttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgt 15635657  T
Q  322 gatgcaagtttag 334  Q
    |||||||||||||    
T  15635658 gatgcaagtttag 15635670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 2e-90; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 24 - 441
Target Start/End: Complemental strand, 21531049 - 21530636
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||| ||||||| ||||| |||| ||||||||||| |||||||||||  |||| ||||||||||| |||||||||||| |||||| |||||||     
T  21531049 atcagttgtgcaatattcctaaagatgtgtttatattttagaaaatatttgaatctgttatagacgttcctgaagatgttcctacattttatgactttca 21530950  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaagg 223  Q
    |||||||||| | |||  ||||    | ||||| |||  ||| ||||||| ||||||||||||||||| ||||| |||| | || |||||||||||||||    
T  21530949 atatttgtctctaattcgtgttc---aaatcagttgggtgatttgttttgctctgaagcccaacaagactatttgacccatatttcttcagtataaaagg 21530853  T
Q  224 aagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttga 323  Q
    ||||| ||||||||| ||||| |||||||||  ||||||||||||| ||||| |||||||||||| ||| ||  ||||||||| ||||||||  ||||||    
T  21530852 aagacttcaagacctaattgaatattcaagctgtcattctaaaaag-tttagtttttagggttttgagtttttgtgtgttctactcttgtattgtgttga 21530754  T
Q  324 tgcaagtttagtac-cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaa 422  Q
    |||| ||||||| |  |||||||| ||||||||||||||||  || ||||||||||| |||| ||||||| ||||||||||||||||||| ||| |||||    
T  21530753 tgcaggtttagtcctgttttattgtgagcctttcttgtatcagtt-tgatacatgttaaggaatgtgtgttgagttgtaaactcttgtgtgctacgccaa 21530655  T
Q  423 agcttttaagcaaggttgt 441  Q
    |||||||||||||| ||||    
T  21530654 agcttttaagcaagattgt 21530636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 35 - 363
Target Start/End: Complemental strand, 15328985 - 15328653
Alignment:
Q  35 aatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctt 134  Q
    ||||||| |||||||||| || |||||||| ||||||||||||||||||| ||||  ||||||||| |||||| |||||| || ||||||||||||||      
T  15328985 aatattcctaaagttgtgtttgtattttagaaaatatttgaagttgttttggacgcccctaaagatattcctacattttaagattttccatatttgtccc 15328886  T
Q  135 tgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaag 234  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  15328885 tgattcctgttttgcagatcagctggacgatctgttttgttctgaagcccaacaagaatatttgacccgagctgcttcagtataaaaggaagacatcaag 15328786  T
Q  235 acctgattgattattca----agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgt-tctattcttgtatcatgttgatgcaag 329  Q
    |||| ||||||||||||    | || |||||||||||||||| || |||||||||||| ||||||  ||||| |||| ||||||||| ||||||||||||    
T  15328785 acctaattgattattcattcaacccgtcattctaaaaagttt-agtttttagggttttgagtcttt-tgtgtgtctactcttgtatcgtgttgatgcaag 15328688  T
Q  330 tttagta-ccttttattgcgagcctttcttgtatc 363  Q
    |||||||   ||| |||| ||||||||||||||||    
T  15328687 tttagtattgtttgattgtgagcctttcttgtatc 15328653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 110 - 438
Target Start/End: Complemental strand, 19445184 - 19444858
Alignment:
Q  110 ttttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttt-tgttctgaagcccaacaagaatatttaacccgtgttg 208  Q
    |||||||||||||||||| ||||| ||||| ||  ||||||||||||||||  ||||||  | |||||| ||    ||||||  ||||| |||||| |||    
T  19445184 ttttaggactttccatatatgtctctgatt-cttatttgtagatcagctggtcgatctgcatctgttctaaaaaa-aacaaggttatttgacccgtattg 19445087  T
Q  209 cttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgt-tctat 307  Q
    |||||||||||||||||||| ||||||||| |||   ||||| |||| |||||||||||||||| || |||||||||||| ||||||  ||| | ||||     
T  19445086 cttcagtataaaaggaagacttcaagacctaattatctattctagccgtcattctaaaaagttt-agtttttagggttttgagtcttt-tgtatgtctac 19444989  T
Q  308 tcttgtatcatgttgatgcaagtttagtacc-ttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||| | | ||||||||| | |||||||| ||| |||||||||||||    
T  19444988 tcttgtatcgtgttgatgcaagtttagtactgttttattgtgagcctttcttgtatcatct-tgatacatgctaaggactgtttgttgagttgtaaactc 19444890  T
Q  407 ttgtgttctatgccaaagcttttaagcaaggt 438  Q
    |||| | |||  || |||||| ||||||||||    
T  19444889 ttgtatgctacaccgaagcttgtaagcaaggt 19444858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 441
Target Start/End: Original strand, 19466229 - 19466429
Alignment:
Q  240 attgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgt-tctattcttgtatcatgttgatgcaagtttagtac- 337  Q
    |||||| ||||||||| ||||||||||||| | |||||||||||||||| ||| |  |||||| ||||  |||||||||  |||||| | |||||||||     
T  19466229 attgatcattcaagccgtcattctaaaaag-tctagcttttagggttttgagt-tgtatgtgtgtctacacttgtatcaccttgatgtaggtttagtact 19466326  T
Q  338 -cttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgttctatgccaaagcttttaagcaag 436  Q
      |||||||| |||||||||||||||| | | ||||||||||| |||| ||||||| ||||||| ||| ||||||| ||| ||| ||| |||| ||||||    
T  19466327 gtttttattgtgagcctttcttgtatc-tctttgatacatgttaaggattgtgtgttgagttgt-aacacttgtgtgctacgcctaagtttttgagcaag 19466424  T
Q  437 gttgt 441  Q
     ||||    
T  19466425 attgt 19466429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 54 - 334
Target Start/End: Complemental strand, 12911133 - 12910853
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    ||||||||||||||||||||    ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||| ||||||| ||||    
T  12911133 ttatattttaggaaatatttattattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgatttttgttttgcagat 12911034  T
Q  154 ca-gctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattca 251  Q
     | |||| |  ||||||  |||| |||||||||||| | | |||||| |||    |||||||||||| ||||||||  ||||||||| |||| |||||||    
T  12911033 taagctgaaccgatctgcattgtgctgaagcccaacga-attatttagcccaaactgcttcagtatataaggaagatttcaagacctaattgtttattca 12910935  T
Q  252 agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    |||| ||||| |||||   ||||| ||||  || ||| ||||||||||| ||||  ||||||||| | | ||||||||||||||    
T  12910934 agccgtcattataaaa--gtttagatttttagggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 12910853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 24789832 - 24789958
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||| ||||| ||||||||| |||| | ||||||||| |||||||||||   ||||| ||||  || ||| ||||||| ||| |||||    
T  24789832 tgcttcagtatataagtaagacttcaagacctaattgttcattcaagccgtcattctaaaa--gtttagatttttagggtttgagtcttcgtgtattcta 24789929  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  24789930 ctcttgtatcgtttgtgatgcaagtttag 24789958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 21249750 - 21249899
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| ||||||||| |||  | |||||||||| | |||||||   |||||  |||| ||||||||||||| | |||||  ||||||||||| |||||||    
T  21249750 gttccgaaagatgtttctacttcttaggacttttcttatttgttactgattcgtgttatgtagatcagctgaacgatctactttgttctgaaacccaaca 21249849  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacct 238  Q
    ||  || ||| ||| | || ||||| |||  ||||||||| |||||||||    
T  21249850 aggttaattagcccatatttcttcaatatgtaaggaagacttcaagacct 21249899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 22611377 - 22611317
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| |||| |  |||||||| |||||||||||    
T  22611377 tgcttcagtatataaggaagacttcaagacctaattgttccttcaagccgtcattctaaaa 22611317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 23759265 - 23759166
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||| | |||||| | |||||  ||||||||||||    
T  23759265 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccaacattttaggactttctagatttgtttctgattcttgttttgtagat 23759166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 411
Target Start/End: Original strand, 26860069 - 26860125
Alignment:
Q  355 tcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtg 411  Q
    |||||||||||||||||| || || ||||||||| | | ||||||||||||| ||||    
T  26860069 tcttgtatcgtttgtgatgcaagtctaggactgtttattgagttgtaaactcatgtg 26860125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 438
Target Start/End: Complemental strand, 33977743 - 33977316
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| |||||||||||||||||| |||||| ||  |||| |||||||||| |||||   ||| ||| |||| ||||| ||||||||| | ||    
T  33977743 atatctttacagaatcagttgtggaatattcctaaagtagtatttattttttaggaaaaatttgttattgatttggacgatcctagagatgttccgacat 33977644  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||| ||||||||||| ||||| |||||||| |||| ||||| |  |||||| |||||||||||||||||| | | ||||| ||||| | |||    
T  33977643 tttaggactttacatatttgtctctgatt-ctgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaaagtatttgacccgagctgc 33977545  T
Q  210 ttcagtataa---aaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    || |||||||   |||  |||| ||||||||| ||  | |||||||||| ||||||||||| ||||    ||||| |||||| ||||| |||||| ||||    
T  33977544 tt-agtataatataagtgagacttcaagacctaatcaactattcaagccgtcattctaaaa-gtttagatttttaaggttttgagtctacatgtgctcta 33977447  T
Q  307 ttcttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
     ||||||||||||||||| ||||||||| | |||| |||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||  | ||||    
T  33977446 ctcttgtatcatgttgattcaagtttagaatcttt-attgtgagcctttctcgtatcgtctgtgatacatgtttaggactgtgtgttgagtttgatactc 33977348  T
Q  407 ttgtgttctatgccaaagcttttaagcaaggt 438  Q
    |||||| |||  ||||||||| ||||||||||    
T  33977347 ttgtgtactacaccaaagcttgtaagcaaggt 33977316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 209 - 438
Target Start/End: Complemental strand, 24092443 - 24092215
Alignment:
Q  209 cttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctatt 308  Q
    |||||||||| |||| |||| |||| |||| ||||| |||||||||| |||||||||||||||| || |||||||| ||| ||||| ||||||| |||      
T  24092443 cttcagtatataagggagacttcaacacctaattgagtattcaagccgtcattctaaaaagttt-agattttaggggtttgagtctacatgtgtgctagg 24092345  T
Q  309 cttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  24092344 cttgtatcatgttgatgcaggtttagtaccttttattgtgagcctttcttgtatcgtttttgatacatgtttaggattgtgtgttgagttgtaaactctt 24092245  T
Q  409 gtgttctatgccaaagcttttaagcaaggt 438  Q
    | || |||  ||||||||| ||||||||||    
T  24092244 gagtactacaccaaagcttgtaagcaaggt 24092215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 109 - 438
Target Start/End: Complemental strand, 33962327 - 33961997
Alignment:
Q  109 attttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgtt 207  Q
    ||||||||||||| ||||||||||| ||||| |||||||| |||| ||||| |  |||||| |||||||||||||||||| | | ||||| ||||| | |    
T  33962327 attttaggactttacatatttgtctctgatt-ctgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaaagtatttgacccgagct 33962229  T
Q  208 gcttcagtataa---aaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttc 304  Q
    ||||||||||||   |||  |||| ||||||||| ||  | |||||||||| ||||||||||| ||||    ||||| | |||| ||||| |||||| ||    
T  33962228 gcttcagtataatataagtgagacttcaagacctaatgaactattcaagccgtcattctaaaa-gtttagatttttaagattttgagtctacatgtgctc 33962130  T
Q  305 tattcttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaac 404  Q
    || ||||||||| || |||||||||||||| |||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||  | ||    
T  33962129 tactcttgtatcctgctgatgcaagtttagaaccttt-attgtgagcctttctcgtatcgtctgtgatacatgtttaggactgtgtgttgagtttgatac 33962031  T
Q  405 tcttgtgttctatgccaaagcttttaagcaaggt 438  Q
    | |||||| |||  ||||| ||| ||||||||||    
T  33962030 ttttgtgtactacaccaaaccttgtaagcaaggt 33961997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 54 - 391
Target Start/End: Original strand, 27924971 - 27925307
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||| ||||||||||   ||| ||   ||| ||||||||||||||| | ||||||||||||||||||||||| | |||||  ||||||| ||||    
T  27924971 ttatattttatgaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 27925070  T
Q  154 cagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaa 252  Q
     ||||| |  |||||| |||||  ||||||| |  |||  |||||| |||  | |||||||||||| |||| |||| ||||||||| |||||| ||||||    
T  27925071 tagctgaaccgatctgctttgtgttgaagccaactaag--tatttagcccaagctgcttcagtatataagggagacttcaagacctaattgatcattcaa 27925168  T
Q  253 gccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagc 351  Q
    ||   ||| |||||||| ||    ||||||| |||| ||||| |||||||||||||||| |||||| | |||||||||||||| |||| | |||| || |    
T  27925169 gctggcatactaaaaaggttagatttttaggattttgagtctacatgtgttctattcttttatcatttgtgatgcaagtttagaacctat-attgtgatc 27925267  T
Q  352 ctttcttgtatcgtttgtgatacatgtttaggactgtgtg 391  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  27925268 ctttcttgtatcgtttgtgatacttgtttaggactgtgtg 27925307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 391
Target Start/End: Complemental strand, 45136795 - 45136418
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    ||||||||| || ||||| |||||||||||  ||||||     |||||||||||||||||||||   ||| ||   ||| ||||| | ||||||| | ||    
T  45136795 atatctttgaagaatcagctgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacat 45136696  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||||||||||||| | |||||  ||||||| |||| ||||| |  ||| || ||||| |||||||||||| | | |||||| | |  | |||    
T  45136695 tttaggactttccatatttgtttatgattcttgttttgcagattagctgaactgatttgctttgtgctgaagcccaacta-agtatttatctcaagctgc 45136597  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    || |||||| ||||||||| ||||||||| |||||||||||||||| |||| ||||||||| |    |||||||||||| |||||| ||| | |||||||    
T  45136596 ttgagtatataaggaagacttcaagacctaattgattattcaagccgtcatactaaaaagtatagatttttagggttttgagtctttatgagctctattc 45136497  T
Q  310 ttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtg 391  Q
    ||||||| | | |||||||||| ||| |||   ||||| |  || ||||||||||||||||||||| ||||||||||||||||    
T  45136496 ttgtatcgtttgtgatgcaagtctagaacc---tattgtgttcc-ttcttgtatcgtttgtgatacttgtttaggactgtgtg 45136418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 89 - 363
Target Start/End: Complemental strand, 25240965 - 25240694
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    ||||| |||||||||||||  | ||| |||||||| |||||||   |||||  |||||||||||||||||||| |||||  |||||||| |||||||| |    
T  25240965 gttccgaaagatgttcctacttcttatgactttccttatttgttactgattcatgttttgtagatcagctggacgatctactttgttctaaagcccaata 25240866  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggtttt 288  Q
    ||| || ||| | | | ||||||||||||| ||||||||| ||||||||| |||   |||||||||| |||| |||||||| ||||||||||||||||||    
T  25240865 agatta-ttagcacatattgcttcagtatagaaggaagacttcaagacctaattaggtattcaagccgtcatactaaaaag-tttagcttttagggtttt 25240768  T
Q  289 aagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtac-ctttta-ttgcgagcctttcttgtatc 363  Q
    || |||   ||||||||| ||||||||| | ||||| |||||||||| |  ||||| ||| ||||||||||||||||    
T  25240767 aactct--gtgtgttctactcttgtatcgt-ttgatacaagtttagtcctgttttatttgtgagcctttcttgtatc 25240694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 18622326 - 18622237
Alignment:
Q  43 taaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtc 132  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||| ||||    
T  18622326 taaaggtgtgattatattttaggaaatatttgaagttgttttggacattcctaaagatgttcctacactttaggactttccatatgtgtc 18622237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 334
Target Start/End: Complemental strand, 22485774 - 22485493
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  22485774 ttatattttaggaaatatttaatattgtttagaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagat 22485675  T
Q  154 ca-gctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattca 251  Q
     | |||| |  ||||||  || | |||||||||||  | ||| |||| |||  |||||||||||||| ||||||||| ||||||||| |||| | |||||    
T  22485674 taagctgaatcgatctgcattttactgaagcccaatga-aatctttagcccaagttgcttcagtatataaggaagacttcaagacctaattgttcattca 22485576  T
Q  252 agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    |||| |||| |||||||| ||||| ||||  || ||| ||||||||||| ||||  ||||||||||| | ||||||||||||||    
T  22485575 agccgtcatactaaaaag-tttagattttttgggtttgagtcttcatgtattctgctcttgtatcatttgtgatgcaagtttag 22485493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 24 - 392
Target Start/End: Original strand, 23540895 - 23541263
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    ||||| |||||||||||  |||||| |   |||||||||||||||||||||   ||| ||   ||| ||||| | ||||||  | ||||| |||||||||    
T  23540895 atcagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttctgacatttttggactttcc 23540994  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    |||||||| | |||||  ||||||| |||| || || |  |||||| ||||| ||||| |||||| | | |||||| |||  | ||||||| |||| |||    
T  23540995 atatttgtttctgattcttgttttgcagattagttgaaccgatctgctttgtgctgaaacccaacta-agtatttagcccaagctgcttcaatatataag 23541093  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttg 322  Q
    ||||||  ||| |||| ||| || ||||||| | |||| |||||||||||    |||||||||||| |||||| |||| ||||  |||| ||||||||||    
T  23541094 gaagactccaatacctaattaatcattcaagtcgtcatactaaaaagtttagatttttagggttttgagtctttatgtattctgctcttttatcatgttg 23541193  T
Q  323 atgcaagtttagtaccttttattgcg-agcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    |||||||||||| | | |||| || |     |||||||||||||||||||||| ||||||||| |||||||    
T  23541194 atgcaagtttagaatc-tttactgtgtcttatttcttgtatcgtttgtgatacttgtttaggattgtgtgt 23541263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 51 - 406
Target Start/End: Complemental strand, 9997141 - 9996788
Alignment:
Q  51 tgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgta 150  Q
    |||| |||||||||||| |||||| |  |||||  || |||| ||||||||||||||  |||||||||||||| | || ||  | ||||  ||||| |||    
T  9997141 tgataatattttaggaattatttggatatgtttg-gaagttcataaagatgttcctactttttaggactttcctttttggtact-gattcatgttt-gta 9997045  T
Q  151 gatcagctggaagatctgt--tttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattat 248  Q
    ||||||||| | ||||||   ||| |||||||||||||||||| ||||| |||||| || |||| ||||| ||  ||||| ||||||||| |||  | |     
T  9997044 gatcagctgaacgatctgcaatttattctgaagcccaacaagactatttgacccgtattacttctgtatataaacaagacttcaagacctaatttgtcac 9996945  T
Q  249 tcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgttgatgcaagtttagtacc-ttttattgc 347  Q
      ||||| |||  |||||||| ||||| |||| ||||||| ||| ||  ||||||||| | ||||| |  ||||||||||||||||| |  ||||||||     
T  9996944 cgaagccgtcaaactaaaaaggtttagttttttgggttttgagtttttgtgtgttctacttttgtagcg-gttgatgcaagtttagtcctgttttattgt 9996846  T
Q  348 gagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactc 406  Q
    |||||||||||||||| | | ||||||||| | |||||| | ||| |||||||||||||    
T  9996845 gagcctttcttgtatcatct-tgatacatgctaaggactatttgttgagttgtaaactc 9996788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 267
Target Start/End: Complemental strand, 26536957 - 26536714
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    |||||||||| ||||||| |||||| ||  |||||||||| ||||||||||   ||||||| |||| | ||||||||||||| | |||||||||| ||||    
T  26536957 atcagttgtgaaatattcctaaagtagtatttatattttatgaaatatttgttattgttttggacgatactaaagatgttccgacattttaggac-ttcc 26536859  T
Q  124 atatttgtctttgatttctgttttgtagatcagctgga-agatctgttttgttctgaagccc-aacaagaatatttaacccgtgttgcttcagtataaaa 221  Q
    ||||||||| |||| |||| ||||| |||| ||||| |  ||| || |||||||| |||||| ||| | | ||||| ||||| | | |||||| ||| ||    
T  26536858 atatttgtcgttga-ttctattttgcagattagctgaaccgatatgctttgttctaaagcccaaactaaagtatttgacccgagctacttcagcatataa 26536760  T
Q  222 ggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |  |||| ||||||||| ||  | |||||||| | |||||||||||    
T  26536759 gtgagacttcaagacctaatgaactattcaagtcgtcattctaaaa 26536714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 261
Target Start/End: Original strand, 20254429 - 20254601
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    |||||||||||| ||||||  ||||||||||||||||||||||  ||||||  ||||  |||||||||||  | |||||   ||||||||||||||||||    
T  20254429 gttcctaaagatattcctaccttttaggactttccatatttgttattgattcttgttacgtagatcagctaaacgatctacattgttctgaagcccaaca 20254528  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcatt 261  Q
    ||  |||| | ||  | || |||||||||| ||| ||||| ||||||||| |||  | ||||||||| |||||    
T  20254529 aggttattgagcctatattccttcagtatataagaaagacttcaagacctaattattcattcaagccgtcatt 20254601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 13660044 - 13660224
Alignment:
Q  207 tgcttcagtata-aaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttct 305  Q
    |||||||||||| ||||||| || ||||||||| |||||| ||||||| | | || ||||||| ||| |  |||||| ||||| ||||| |||||| |||    
T  13660044 tgcttcagtatataaaggaa-acttcaagacctaattgatcattcaagtcgttatactaaaaaatttaaa-ttttagagttttgagtctacatgtgctct 13660141  T
Q  306 attcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    ||||||||||| | | |||||||||||||| ||| ||||||| ||  |||||||||||| | |||||||| ||||||| |||||    
T  13660142 attcttgtatcgtttgtgatgcaagtttagaacc-tttattgtgatactttcttgtatcatatgtgatacttgtttagaactgt 13660224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 13718687 - 13718867
Alignment:
Q  207 tgcttcagtata-aaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttct 305  Q
    |||||||||||| ||||||| || ||||||||| |||||| ||||||| | | || ||||||| ||| |  |||||| ||||| ||||| |||||| |||    
T  13718687 tgcttcagtatataaaggaa-acttcaagacctaattgatcattcaagtcgttatactaaaaaatttaaa-ttttagagttttgagtctacatgtgctct 13718784  T
Q  306 attcttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgt 388  Q
    ||||||||||| | | |||||||||||||| ||| ||||||| ||  |||||||||||| | |||||||| ||||||| |||||    
T  13718785 attcttgtatcgtttgtgatgcaagtttagaacc-tttattgtgatactttcttgtatcatatgtgatacttgtttagaactgt 13718867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 1684561 - 1684520
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttg 130  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  1684561 gttcctaaagatgttcctaccttttaggagtttccatatttg 1684520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 115; Significance: 3e-58; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 24 - 412
Target Start/End: Original strand, 7026 - 7415
Alignment:
Q  24 atcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttcc 123  Q
    ||||||| |||||||||  |||||| ||  |||||||||||||||||||||   ||| ||   ||| ||||||||||||||| | |||||||||||||||    
T  7026 atcagttctggaatatttctaaagtagtatttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccaacattttaggactttcc 7125  T
Q  124 atatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaag 222  Q
    |||||||| | || ||  ||||||  |||| ||| | |  |||||  ||||| |||||||||||  | | |||||| |||| | |||||||||||| |||    
T  7126 atatttgtttctggttcttgtttttcagattagccgaaccgatctactttgtactgaagcccaaataaagtatttagcccgagctgcttcagtatataag 7225  T
Q  223 gaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-t 321  Q
    | |||| ||||||||| |||||| |||||||||  |||||||| ||||||    |||||||||||| ||||| |||||| |||| ||||||||| | | |    
T  7226 ggagacttcaagacctaattgatcattcaagccgccattctaataagtttagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgt 7325  T
Q  322 gatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactcttgtgt 412  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  | ||||||||||    
T  7326 gatgcaagtttagaacctat-attgtgagcctttcttgtatcgtctgtgatacatgtttaggactgtgtgttgagtttgatactcttgtgt 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 11 - 412
Target Start/End: Original strand, 17600 - 18002
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| ||||| | |||||||||  |||||| ||  ||||||||||||||||||||    ||| ||   | | ||||||||||||||| | ||    
T  17600 atatctttacagaatcagctatggaatatttctaaagtagtatttatattttaggaaatattttttattggttggaatgatcctaaagatgttccaacat 17699  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||| ||||||||| | |||||  ||||||| |||  ||||| |  |||||| ||||| | |||||||||| | | |||||| |||  | |||    
T  17700 tttaggacttttcatatttgtttatgattcttgttttgcagaatagctgaaccgatctgctttgtaccgaagcccaactaaactatttagcccaagctgc 17799  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    ||||||||| |||| |||| ||||||||  | |||| ||||||| | ||||||||||||||||   ||||||||||||| ||||| |||||| |||| ||    
T  17800 ttcagtatataagggagacttcaagaccaaagtgatcattcaagtcgtcattctaaaaagtttagacttttagggttttgagtctacatgtgctctactc 17899  T
Q  310 ttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    ||||||| | | |||||||||||||| ||| | ||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||||  | ||||||    
T  17900 ttgtatcgtttgtgatgcaagtttagaacc-tatattgtgagcctttcttgtatcgtccgtgatacatgtttaggactgtgtgttgagtttgatactctt 17998  T
Q  409 gtgt 412  Q
    ||||    
T  17999 gtgt 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 11 - 412
Target Start/End: Original strand, 26994 - 27396
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||||| ||| ||||| | |||||||||  |||||| ||  ||||||||||||||||||||    ||| ||   | | ||||||||||||||| | ||    
T  26994 atatctttacagaatcagctatggaatatttctaaagtagtatttatattttaggaaatattttttattggttggaatgatcctaaagatgttccaacat 27093  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    ||||||||||| ||||||||| | |||||  ||||||| |||  ||||| |  |||||| ||||| | |||||||||| | | |||||| |||  | |||    
T  27094 tttaggacttttcatatttgtttatgattcttgttttgcagaatagctgaaccgatctgctttgtaccgaagcccaactaaactatttagcccaagctgc 27193  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    ||||||||| |||| |||| ||||||||  | |||| ||||||| | ||||||||||||||||   ||||||||||||| ||||| |||||| |||| ||    
T  27194 ttcagtatataagggagacttcaagaccaaagtgatcattcaagtcgtcattctaaaaagtttagacttttagggttttgagtctacatgtgctctactc 27293  T
Q  310 ttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagttgtaaactctt 408  Q
    ||||||| | | |||||||||||||| ||| | ||||| ||||||||||||||||||  ||||||||||||||||||||||||| |||||  | ||||||    
T  27294 ttgtatcgtttgtgatgcaagtttagaacc-tatattgtgagcctttcttgtatcgtccgtgatacatgtttaggactgtgtgttgagtttgatactctt 27392  T
Q  409 gtgt 412  Q
    ||||    
T  27393 gtgt 27396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 398
Target Start/End: Original strand, 8054 - 8443
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttag-acgttcctaaagatgttcctata 109  Q
    ||||||||  || ||||| ||||||||| |  |||||| ||  |||||||||||||||||||||   ||| ||  | ||| ||||||||||||||| | |    
T  8054 atatctttatagaatcagctgtggaatacttctaaagtagtatttatattttaggaaatatttgttattggttggggacgatcctaaagatgttccgaca 8153  T
Q  110 ttttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttg 208  Q
    |||||||||||||||||||||| | |||||  |||| || |||| ||||| |  |||||| ||||| || ||| ||||| | | |||||| |||  | ||    
T  8154 ttttaggactttccatatttgtttatgattgttgttatgcagattagctgaaccgatctgctttgtgctaaagtccaactaaagtatttagcccaagctg 8253  T
Q  209 cttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctatt 308  Q
    |||||||||| |||| |||| ||||||||| |||||| |||||||||  |||||||| | ||||  | |||||||||||| ||||| |||||| |||| |    
T  8254 cttcagtatataagggagacttcaagacctaattgatcattcaagccgacattctaagaggtttgggtttttagggttttgagtctacatgtgctctact 8353  T
Q  309 cttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgtagagtt 398  Q
    ||| |||||| | |||||||||||||| ||| ||||||| |||||||||| ||||||| |||||||||||||||||||||| ||| |||||    
T  8354 cttttatcatttgtgatgcaagtttagaacc-tttattgagagcctttctcgtatcgtctgtgatacatgtttaggactgtatgttgagtt 8443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 100 - 392
Target Start/End: Complemental strand, 6502 - 6211
Alignment:
Q  100 tgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatattta 198  Q
    |||||| | ||||||||||||| || |||||| | ||| ||| |||||| |||| ||||| |  |||||| ||||| || ||||||||| | | ||||||    
T  6502 tgttccgacattttaggacttttcagatttgtttatgaattcagttttgcagattagctgaaccgatctgctttgtactaaagcccaacga-agtattta 6404  T
Q  199 acccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcat 298  Q
     |||  | |||||||||||||||  ||||| ||||||||| |||| | ||| ||||| |||| ||||||| |||    |||||||||||| ||||| |||    
T  6403 gcccaagctgcttcagtataaaaacaagacttcaagacctaattgctcatttaagccgtcatactaaaaaatttagatttttagggttttgagtctacat 6304  T
Q  299 gtgttctattcttgtatcatgttgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttaggactgtgtgt 392  Q
    || |||| |||||||||||||||||||||||||||| | | |||| || | ||||| |||||||||  |||||||| |||||||||||||||||    
T  6303 gtattctgttcttgtatcatgttgatgcaagtttagaatc-tttactgtgtgccttacttgtatcgcctgtgatacttgtttaggactgtgtgt 6211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 89 - 363
Target Start/End: Complemental strand, 569 - 294
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaagatctgttttgttctgaagcccaaca 188  Q
    |||||||||||||||||||| |||||||||||||| | || ||  | ||||  | ||||| |||||||||||| |||||| |||||||||||||||||      
T  569 gttcctaaagatgttcctattttttaggactttcctttttggtact-gattcgtattttgcagatcagctggatgatctgatttgttctgaagcccaaac 471  T
Q  189 agaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattc-aagccatcattctaaaaagttttagcttttagggttt 287  Q
     |  ||||| |||||| ||||||||||||| |   ||||| ||||||||| ||| |||   | ||||  |||  |||||||| ||||| |||||||||||    
T  470 cgtttatttgacccgtattgcttcagtatatattcaagacttcaagacctaattcattcaccgaagctgtcaaactaaaaaggtttagtttttagggttt 371  T
Q  288 taagtcttcatgtgttctattcttgtatcatgttgatgcaagtttag-taccttttattgcgagcctttcttgtatc 363  Q
    | ||||||  ||| ||||| ||||||||| ||||||||||| ||||| | | |||||||| ||||||| ||||||||    
T  370 tgagtctttgtgtcttctactcttgtatcgtgttgatgcaattttagtttcgttttattgtgagccttacttgtatc 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 384
Target Start/End: Original strand, 16096 - 16467
Alignment:
Q  11 atatctttgcaggatcagttgtggaatattcttaaagttgtgattatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatat 110  Q
    |||||| | ||| ||||| ||| |||||||  |||||| |  |||||||||||| |||||||||   ||| ||   ||| ||||||||||||||| | ||    
T  16096 atatctatacagaatcagatgttgaatatttctaaagtagatattatattttagaaaatatttgttattggttggaacgatcctaaagatgttccgacat 16195  T
Q  111 tttaggactttccatatttgtctttgatttctgttttgtagatcagctggaaga-tctgttttgttctgaagcccaacaagaatatttaacccgtgttgc 209  Q
    | | ||| ||||||||||||| | |||||  ||||||| |||| ||||| |  | |||| ||||| |||||||||||| | | |||||| |||  | |||    
T  16196 tctgggattttccatatttgtttctgattcttgttttgcagattagctgaactaatctgctttgtgctgaagcccaacta-agtatttagcccaagatgc 16294  T
Q  210 ttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattc 309  Q
    |||| |||| ||||  ||| ||| ||||| |||| | ||||||||| ||||  ||||||||||    |||||||||||| | | | |||||| |||||||    
T  16295 ttcaatatataagggggacttcaggacctaattgttcattcaagccgtcatattaaaaagtttagatttttagggttttgaatttacatgtgctctattc 16394  T
Q  310 ttgtatcatgt-tgatgcaagtttagtaccttttattgcgagcctttcttgtatcgtttgtgatacatgtttagga 384  Q
    ||||||| | | |||||| ||||||| ||||||| |   || |||||||||||||||||||||||| |||||||||    
T  16395 ttgtatcgtttgtgatgcgagtttagaaccttttgt---gatcctttcttgtatcgtttgtgatacttgtttagga 16467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 54 - 334
Target Start/End: Original strand, 1886 - 2166
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    ||||||||| ||||||||||    ||||||   ||| ||||| | ||||||| | |||||||||||||| | |||||| | |||||  ||||||| ||||    
T  1886 ttatatttttggaaatatttattattgtttggaacgatcctataaatgttccgacattttaggactttctagatttgtttctgattcttgttttgcagat 1985  T
Q  154 ca-gctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattca 251  Q
     | |||| |  ||| || ||||| |||||||||||||| | |||||| |||    |||||||||||| ||||||||| ||||||||| ||||||||||||    
T  1986 taagctgaaccgatatgctttgtgctgaagcccaacaa-attatttagcccaaactgcttcagtatataaggaagacttcaagacctaattgattattca 2084  T
Q  252 agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    |||| |||||||||||   ||||| ||||   | ||| ||||||||||| ||||  ||||||||| | | ||||||||||||||    
T  2085 agccgtcattctaaaa--gtttagattttcaaggtttgagtcttcatgtattctgctcttgtatcgtttgtgatgcaagtttag 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 316
Target Start/End: Original strand, 25196 - 25458
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| | |||||  ||||||| ||||    
T  25196 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagat 25295  T
Q  154 ca-gctggaa-gatctgttttgttctgaagcccaacaagaatatttaacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattca 251  Q
     | |||| |  ||||||  || | |||||||||||| | | |||||| |||  | |||||||||||| ||||||||| ||||||||| |||| | |||||    
T  25296 taagctgaaccgatctgcattttactgaagcccaacga-attatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattca 25394  T
Q  252 agccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatc 316  Q
    || | |||| ||||||||  |||| ||||  || ||| ||||||||||| ||||| || ||||||    
T  25395 agtcgtcatactaaaaag-gttagatttttagggtttgagtcttcatgtattctactcgtgtatc 25458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 16844 - 16949
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttgtagat 153  Q
    |||||||||||||||||||||   ||| ||   ||| ||||||||||||||| | ||||||||||||| ||||||||| | |||||||||||| | ||||    
T  16844 ttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggacttttcatatttgtttctgatttctgtttcgcagat 16943  T
Q  154 cagctg 159  Q
     |||||    
T  16944 tagctg 16949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 48065 - 48113
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagcc 255  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  48065 tgcttcagtatataaggaagacttcaagacctaattgattattcaagcc 48113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 47910 - 48004
Alignment:
Q  54 ttatattttaggaaatatttgaagttgttttagacgttcctaaagatgttcctatattttaggactttccatatttgtctttgatttctgttttg 148  Q
    |||||||||||||||||||| |  ||||||   ||| ||||| | ||||||| | |||||||||||||||| |||||| |||||||  |||||||    
T  47910 ttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttttgattcttgttttg 48004  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 356968 - 357028
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    ||||| |||||| ||||||||| |||| |||| |||||||||||||||| |||||||||||    
T  356968 tgctttagtatataaggaagacttcaaaacctaattgattattcaagccgtcattctaaaa 357028  T

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Target: scaffold0359 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 2398 - 2299
Alignment:
Q  215 tataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgta 314  Q
    |||| ||||||||| ||||||||| |||| | ||||||||| |||||||||||   ||||| ||||  || ||||||||||||||| ||||  |||||||    
T  2398 tatataaggaagacttcaagacctaattgttcattcaagccgtcattctaaaa--gtttagatttttagggtttaagtcttcatgtattctgctcttgta 2301  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 334
Target Start/End: Original strand, 12183 - 12309
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttcta 306  Q
    |||||||||||| ||||||||| ||||||||| |||| | ||||||| | ||| |||||||   ||||| ||||  || ||| ||||||||||| ||||     
T  12183 tgcttcagtatataaggaagacttcaagacctaattgctcattcaagtcgtcactctaaaa--gtttagatttttagggtttgagtcttcatgtattctg 12280  T
Q  307 ttcttgtatcatgt-tgatgcaagtttag 334  Q
     ||||||||| | | ||||||||||||||    
T  12281 ctcttgtatcgtttgtgatgcaagtttag 12309  T

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Target: scaffold0037 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 109932 - 109992
Alignment:
Q  207 tgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaa 267  Q
    |||||||||||| ||||||||| ||||||||| |||| | |||||| || |||||||||||    
T  109932 tgcttcagtatataaggaagacttcaagacctaattgttcattcaaaccgtcattctaaaa 109992  T

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Target: scaffold0480 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 11780 - 11745
Alignment:
Q  96 aagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||||| |||||||||||||||||||||||    
T  11780 aagatgttcctacattttaggactttccatatttgt 11745  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 334
Target Start/End: Complemental strand, 37186 - 36952
Alignment:
Q  99 atgttcctatattttaggactttccatatttgtctttgatttctgttttgtagatcagctggaa-gatctgttttgttctgaagcccaacaagaatattt 197  Q
    ||||||| | ||||||||||| |||| |||||| | |||||  ||||||| |||  ||||| |  ||| || ||||| |||| ||||||| | | |||||    
T  37186 atgttccgacattttaggactgtccagatttgtttatgattcttgttttgcagactagctgaaccgatttgctttgtgctgaggcccaacga-attattt 37088  T
Q  198 aacccgtgttgcttcagtataaaaggaagacatcaagacctgattgattattcaagccatcattctaaaaagttttagcttttagggttttaagtcttca 297  Q
    | ||| || | ||| ||| || ||||||||| ||||||||| |||| | ||||||||  |||||||||||   ||||| ||||  || ||| ||||||||    
T  37087 agcccatgctactttagtctagaaggaagacttcaagacctaattgttcattcaagctgtcattctaaaa--gtttagatttttagggtttgagtcttca 36990  T
Q  298 tgtgttctattcttgtatcatgt-tgatgcaagtttag 334  Q
    ||| ||||  ||||||||| | | ||||||||||||||    
T  36989 tgtattctgctcttgtatcgtttgtgatgcaagtttag 36952  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 73799 - 73841
Alignment:
Q  89 gttcctaaagatgttcctatattttaggactttccatatttgt 131  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  73799 gttcctaaagatgttcctactttttaggagtttccatatttgt 73841  T

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