View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17797_low_21 (Length: 370)

Name: NF17797_low_21
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17797_low_21
NF17797_low_21
[»] chr2 (36 HSPs)
chr2 (17-361)||(38565701-38566043)
chr2 (146-357)||(41302047-41302261)
chr2 (146-247)||(30387316-30387417)
chr2 (146-353)||(7444058-7444258)
chr2 (146-353)||(19090732-19090940)
chr2 (289-357)||(24484765-24484832)
chr2 (146-232)||(22575740-22575825)
chr2 (146-239)||(14904665-14904758)
chr2 (146-237)||(19686051-19686140)
chr2 (146-247)||(2554306-2554405)
chr2 (146-247)||(41825719-41825818)
chr2 (289-353)||(6883771-6883835)
chr2 (153-249)||(25415173-25415269)
chr2 (146-249)||(27861594-27861697)
chr2 (289-353)||(31548766-31548830)
chr2 (146-241)||(25622073-25622168)
chr2 (292-353)||(6221522-6221584)
chr2 (292-353)||(33015099-33015161)
chr2 (149-242)||(31548619-31548712)
chr2 (289-345)||(7879938-7879994)
chr2 (146-217)||(33014949-33015019)
chr2 (293-351)||(22575892-22575950)
chr2 (292-353)||(44313949-44314011)
chr2 (292-353)||(44322128-44322190)
chr2 (292-345)||(45277084-45277137)
chr2 (289-349)||(25621962-25622022)
chr2 (146-237)||(44313799-44313888)
chr2 (292-346)||(19678495-19678549)
chr2 (289-346)||(89910-89967)
chr2 (292-337)||(2554208-2554253)
chr2 (289-346)||(2566065-2566122)
chr2 (289-342)||(6271192-6271245)
chr2 (292-349)||(11198904-11198961)
chr2 (289-346)||(29303634-29303691)
chr2 (292-337)||(41825871-41825916)
chr2 (289-353)||(14904545-14904609)
[»] chr8 (32 HSPs)
chr8 (144-349)||(9137829-9138038)
chr8 (146-247)||(16729977-16730077)
chr8 (146-241)||(35824371-35824466)
chr8 (148-237)||(3762941-3763029)
chr8 (146-237)||(40971683-40971774)
chr8 (146-237)||(45117713-45117803)
chr8 (146-237)||(1981842-1981932)
chr8 (295-357)||(24190099-24190161)
chr8 (293-343)||(28374282-28374332)
chr8 (146-237)||(7972739-7972829)
chr8 (294-344)||(602039-602089)
chr8 (149-247)||(9381600-9381697)
chr8 (146-247)||(23231753-23231853)
chr8 (289-345)||(6927136-6927192)
chr8 (290-353)||(9381744-9381808)
chr8 (289-345)||(11648016-11648072)
chr8 (293-353)||(16729866-16729926)
chr8 (289-353)||(23231900-23231964)
chr8 (289-345)||(28516927-28516983)
chr8 (292-353)||(31597658-31597720)
chr8 (292-353)||(45117602-45117664)
chr8 (289-346)||(2878783-2878840)
chr8 (293-337)||(7263540-7263584)
chr8 (146-210)||(11647866-11647930)
chr8 (192-248)||(24189990-24190046)
chr8 (146-237)||(7263409-7263499)
chr8 (146-237)||(31597781-31597870)
chr8 (292-335)||(35824271-35824314)
chr8 (292-342)||(1981744-1981794)
chr8 (293-351)||(7972889-7972947)
chr8 (146-247)||(15663390-15663490)
chr8 (191-232)||(39906504-39906545)
[»] chr4 (39 HSPs)
chr4 (165-346)||(1842782-1842963)
chr4 (193-357)||(9921504-9921668)
chr4 (146-237)||(10094776-10094866)
chr4 (292-353)||(3665055-3665116)
chr4 (143-357)||(9896143-9896357)
chr4 (146-247)||(24610839-24610939)
chr4 (146-237)||(28803662-28803751)
chr4 (146-237)||(39480009-39480099)
chr4 (293-351)||(36213870-36213928)
chr4 (292-353)||(31915604-31915665)
chr4 (146-239)||(41508859-41508951)
chr4 (146-353)||(10142653-10142863)
chr4 (289-353)||(25201802-25201866)
chr4 (146-237)||(7413499-7413588)
chr4 (146-237)||(7459580-7459669)
chr4 (144-202)||(51890302-51890360)
chr4 (144-202)||(51890575-51890633)
chr4 (292-353)||(52460677-52460739)
chr4 (293-346)||(6261516-6261569)
chr4 (161-237)||(13957876-13957952)
chr4 (292-353)||(10094928-10094990)
chr4 (292-353)||(28803800-28803862)
chr4 (293-351)||(39480159-39480217)
chr4 (292-352)||(7413650-7413711)
chr4 (292-352)||(7459731-7459792)
chr4 (289-353)||(13957758-13957820)
chr4 (289-354)||(20151810-20151875)
chr4 (146-203)||(23935651-23935708)
chr4 (296-353)||(24611000-24611056)
chr4 (289-346)||(28143026-28143083)
chr4 (289-342)||(51338106-51338159)
chr4 (149-237)||(18326779-18326867)
chr4 (149-237)||(18438531-18438619)
chr4 (146-226)||(21320455-21320535)
chr4 (149-247)||(6261371-6261465)
chr4 (293-344)||(21320346-21320396)
chr4 (146-191)||(14032334-14032379)
chr4 (289-346)||(14191891-14191948)
chr4 (146-247)||(36213967-36214065)
[»] chr3 (33 HSPs)
chr3 (153-357)||(29714093-29714304)
chr3 (152-344)||(44662937-44663134)
chr3 (153-242)||(16876635-16876724)
chr3 (146-235)||(40145736-40145823)
chr3 (296-357)||(10992836-10992897)
chr3 (146-237)||(10993918-10994007)
chr3 (146-237)||(25071901-25071989)
chr3 (292-347)||(3917610-3917665)
chr3 (146-237)||(27941272-27941361)
chr3 (293-352)||(33100338-33100397)
chr3 (289-352)||(47185487-47185550)
chr3 (292-353)||(19157229-19157291)
chr3 (292-353)||(25071779-25071841)
chr3 (291-353)||(44879955-44880017)
chr3 (146-239)||(11830155-11830246)
chr3 (289-353)||(12893437-12893501)
chr3 (146-237)||(15761117-15761206)
chr3 (292-353)||(10994055-10994117)
chr3 (291-352)||(6584110-6584171)
chr3 (289-346)||(31884535-31884592)
chr3 (146-186)||(33100188-33100228)
chr3 (293-337)||(52448295-52448339)
chr3 (146-248)||(1425002-1425105)
chr3 (146-237)||(19157352-19157441)
chr3 (150-241)||(47185603-47185693)
chr3 (292-353)||(15760995-15761057)
chr3 (292-353)||(27941422-27941484)
chr3 (292-342)||(53076874-53076924)
chr3 (146-191)||(1418215-1418260)
chr3 (289-346)||(6024331-6024388)
chr3 (289-342)||(23044482-23044535)
chr3 (146-191)||(36641827-36641872)
chr3 (289-337)||(36641619-36641667)
[»] chr6 (37 HSPs)
chr6 (146-353)||(15060279-15060491)
chr6 (150-249)||(31130178-31130277)
chr6 (289-357)||(22525003-22525071)
chr6 (154-247)||(13758347-13758440)
chr6 (146-357)||(3228820-3229034)
chr6 (292-353)||(13758492-13758553)
chr6 (292-357)||(19108224-19108289)
chr6 (146-237)||(1603630-1603719)
chr6 (146-229)||(21442849-21442930)
chr6 (146-237)||(34043803-34043892)
chr6 (292-350)||(1423094-1423152)
chr6 (146-247)||(11680231-11680332)
chr6 (292-353)||(21442773-21442835)
chr6 (292-353)||(34043680-34043742)
chr6 (292-344)||(18675498-18675550)
chr6 (289-337)||(30358982-30359030)
chr6 (289-345)||(33516205-33516261)
chr6 (294-353)||(26817755-26817814)
chr6 (292-353)||(1603505-1603567)
chr6 (292-353)||(22012022-22012084)
chr6 (299-357)||(31130065-31130123)
chr6 (292-353)||(15603684-15603745)
chr6 (146-187)||(26817918-26817959)
chr6 (293-353)||(11680381-11680440)
chr6 (293-337)||(20990591-20990635)
chr6 (289-337)||(30359799-30359847)
chr6 (156-247)||(1213241-1213330)
chr6 (146-237)||(1423213-1423302)
chr6 (146-237)||(18675611-18675700)
chr6 (146-237)||(22011872-22011961)
chr6 (292-353)||(1131910-1131969)
chr6 (154-247)||(14678726-14678822)
chr6 (155-237)||(15603541-15603623)
chr6 (289-342)||(4064847-4064900)
chr6 (289-346)||(14678195-14678252)
chr6 (146-247)||(20990688-20990787)
chr6 (219-247)||(18617081-18617109)
[»] chr1 (40 HSPs)
chr1 (146-247)||(9023676-9023776)
chr1 (289-353)||(42055719-42055783)
chr1 (146-247)||(47396855-47396956)
chr1 (143-247)||(48646543-48646647)
chr1 (146-237)||(27430553-27430643)
chr1 (146-237)||(48999661-48999750)
chr1 (147-237)||(48596107-48596196)
chr1 (144-237)||(17967078-17967169)
chr1 (146-247)||(23663865-23663964)
chr1 (292-353)||(44310784-44310845)
chr1 (146-237)||(5049714-5049802)
chr1 (146-237)||(26465323-26465413)
chr1 (146-247)||(25095417-25095516)
chr1 (146-237)||(21906638-21906727)
chr1 (292-353)||(22070639-22070701)
chr1 (291-353)||(48646436-48646498)
chr1 (292-349)||(9023564-9023621)
chr1 (292-353)||(23664014-23664075)
chr1 (292-353)||(48596258-48596320)
chr1 (149-210)||(8737660-8737720)
chr1 (292-353)||(12783463-12783524)
chr1 (289-346)||(28945390-28945447)
chr1 (289-342)||(36297158-36297211)
chr1 (144-247)||(42055572-42055670)
chr1 (289-342)||(42722693-42722746)
chr1 (293-353)||(12028266-12028326)
chr1 (146-237)||(22070761-22070849)
chr1 (290-345)||(47559240-47559294)
chr1 (291-353)||(5208349-5208411)
chr1 (292-353)||(17967230-17967292)
chr1 (292-353)||(21906515-21906577)
chr1 (292-342)||(26465225-26465275)
chr1 (292-342)||(27430704-27430754)
chr1 (146-180)||(33048695-33048729)
chr1 (292-342)||(34307352-34307402)
chr1 (146-191)||(9371561-9371606)
chr1 (171-247)||(12783337-12783414)
chr1 (289-346)||(26222154-26222211)
chr1 (146-186)||(32175707-32175747)
chr1 (149-237)||(34307003-34307089)
[»] chr5 (38 HSPs)
chr5 (146-239)||(6769109-6769202)
chr5 (146-247)||(42879842-42879941)
chr5 (146-247)||(43170780-43170881)
chr5 (289-349)||(16686640-16686700)
chr5 (289-353)||(43170925-43170989)
chr5 (146-247)||(5578365-5578464)
chr5 (292-353)||(13820518-13820579)
chr5 (289-353)||(29789933-29789997)
chr5 (146-249)||(8805780-8805882)
chr5 (292-349)||(29150737-29150794)
chr5 (293-353)||(16039914-16039973)
chr5 (146-237)||(2677225-2677314)
chr5 (146-237)||(9409318-9409408)
chr5 (146-237)||(23963108-23963197)
chr5 (146-248)||(38915388-38915491)
chr5 (292-353)||(18889204-18889266)
chr5 (161-226)||(8379472-8379536)
chr5 (292-353)||(13490526-13490587)
chr5 (289-353)||(37135221-37135285)
chr5 (146-237)||(13382356-13382445)
chr5 (149-249)||(13825720-13825815)
chr5 (292-353)||(2677100-2677162)
chr5 (292-353)||(13382506-13382568)
chr5 (292-349)||(13825865-13825920)
chr5 (292-353)||(23962986-23963048)
chr5 (149-247)||(37135333-37135431)
chr5 (146-247)||(39537172-39537271)
chr5 (292-349)||(5578515-5578572)
chr5 (289-342)||(21491705-21491758)
chr5 (301-353)||(5120416-5120468)
chr5 (293-345)||(38491506-38491558)
chr5 (293-353)||(39537307-39537367)
chr5 (299-351)||(42879733-42879785)
chr5 (293-343)||(9409468-9409518)
chr5 (149-249)||(13490623-13490724)
chr5 (299-353)||(20891041-20891095)
chr5 (301-353)||(8805935-8805986)
chr5 (146-202)||(26403062-26403118)
[»] chr7 (35 HSPs)
chr7 (146-247)||(8113260-8113361)
chr7 (289-342)||(5771179-5771232)
chr7 (146-237)||(8389051-8389140)
chr7 (163-241)||(28459894-28459972)
chr7 (292-353)||(20394692-20394753)
chr7 (289-352)||(3123670-3123733)
chr7 (146-237)||(31072280-31072369)
chr7 (146-247)||(3123519-3123621)
chr7 (292-353)||(4539997-4540059)
chr7 (197-247)||(5771284-5771334)
chr7 (292-353)||(8389205-8389267)
chr7 (291-357)||(39038153-39038219)
chr7 (289-346)||(6188982-6189039)
chr7 (289-346)||(6195498-6195555)
chr7 (289-353)||(21863995-21864059)
chr7 (290-353)||(8113410-8113472)
chr7 (153-247)||(20394549-20394641)
chr7 (289-342)||(14574232-14574285)
chr7 (146-191)||(15678520-15678565)
chr7 (289-342)||(15995395-15995448)
chr7 (289-342)||(48637158-48637211)
chr7 (146-237)||(1623791-1623879)
chr7 (293-337)||(35477885-35477929)
chr7 (146-247)||(39037999-39038102)
chr7 (294-329)||(44734081-44734116)
chr7 (289-344)||(48238919-48238974)
chr7 (291-353)||(9420815-9420877)
chr7 (292-353)||(31072430-31072492)
chr7 (289-346)||(8070041-8070098)
chr7 (289-330)||(8604312-8604353)
chr7 (146-247)||(9420928-9421028)
chr7 (146-191)||(12383093-12383138)
chr7 (292-353)||(24441568-24441629)
chr7 (293-345)||(135802-135854)
chr7 (293-337)||(13754267-13754311)
[»] scaffold0116 (1 HSPs)
scaffold0116 (292-357)||(41104-41168)
[»] scaffold1364 (2 HSPs)
scaffold1364 (289-353)||(1243-1307)
scaffold1364 (153-244)||(1355-1447)
[»] scaffold1266 (2 HSPs)
scaffold1266 (289-353)||(1709-1773)
scaffold1266 (172-247)||(1821-1897)
[»] scaffold0093 (1 HSPs)
scaffold0093 (146-237)||(51106-51195)
[»] scaffold0385 (1 HSPs)
scaffold0385 (293-344)||(1113-1164)
[»] scaffold0137 (1 HSPs)
scaffold0137 (292-336)||(21086-21130)
[»] scaffold0229 (1 HSPs)
scaffold0229 (156-247)||(14404-14493)
[»] scaffold0743 (1 HSPs)
scaffold0743 (289-346)||(2387-2444)
[»] scaffold0311 (1 HSPs)
scaffold0311 (146-186)||(4578-4618)
[»] scaffold0263 (1 HSPs)
scaffold0263 (289-353)||(18245-18309)


Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 361
Target Start/End: Original strand, 38565701 - 38566043
Alignment:
Q  17 atattgtccaacatagttcctcccaatgaaactttaagggctagagtttgccacttggtctccatgtatagcttgtgccgaaaacatgaagaatctagcc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38565701 atattgtccaacatagttcctcccaatgaaactttaagggctagaggttgccgcttggtctccatgtatagcttgtgccgaaaacatgaagaatctagcc 38565800  T
Q  117 agcatttgtttttcaagtgcagggtctcattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgtttt 216  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  38565801 agcatttgtttttcaagtgcaggg--tcattcctagagttttacgggtcttaggcataatatgagaaaagagccccttgtataatacgtcataatgtttt 38565898  T
Q  217 ttagctcattgttgtgattttattagctctttacnnnnnnncttccgcttttcactaccaaatannnnnnnnaggcaacatctgaaaataaatcaaatac 316  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  38565899 ttagctcattgttgtgattttattagctctttactttttttcttccgcttttcactaccaaatattttttttaggcaacatctgaaaataaatcaaatac 38565998  T
Q  317 tttatagacaccaaaacaaaacaaaataccgtagaagagaataat 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38565999 tttatagacaccaaaacaaaacaaaataccgtagaagagaataat 38566043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 357
Target Start/End: Original strand, 41302047 - 41302261
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||   |||||||| |||||||||||||||||||||||    
T  41302047 ttcctagagttttacgggccttaggcataatatgagaaaagggccccttatataatacgtcataaatctttttagcgcattgttgtgattttattagctc 41302146  T
Q  246 ttta-cnnnnnnncttccgcttttcactaccaaata--nnnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    | ||          || | ||||| ||||||| |||          ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||    
T  41302147 tatatttatttatttttcactttttactaccacataatgtttttttaggcaacatctgaaaataaatcaaaaactttatagacaccaaaacaaattaaaa 41302246  T
Q  343 taccgtagaagagaa 357  Q
    |||||||||||||||    
T  41302247 taccgtagaagagaa 41302261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 30387417 - 30387316
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||||||||| ||||||||||||||||||||| ||||  |||||||| ||||| |||| |||| |||||||||||||| ||||||||||||||||||    
T  30387417 ttcctagagtttttcgggtcttaggcataatatgagaaaatggccccttacataattcgtcgtaattttttttagctcattattgtgattttattagctc 30387318  T
Q  246 tt 247  Q
    ||    
T  30387317 tt 30387316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 353
Target Start/End: Complemental strand, 7444258 - 7444058
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataa--tgttttttagctcattgttgtgattttattagc 243  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||| ||||||  | |||||| ||||||||||||| |||| |||||    
T  7444258 ttcctagagttttacgggtcttaggcataatatgaaaaaag-ggcccttacataatacatcataaattatttttttgctcattgttgtg-tttttttagc 7444161  T
Q  244 tctttacnnnnnnncttccgcttttcactaccaaat--annnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaa 341  Q
    ||||||         || ||||||||||||||||||  |        || |||||||||||||||||| ||||||| |||| |||||||||||||| |||    
T  7444160 tcttta---------tttcgcttttcactaccaaataaatgttttttagacaacatctgaaaataaattaaatactctatatacaccaaaacaaaataaa 7444070  T
Q  342 ataccgtagaag 353  Q
    ||| ||||||||    
T  7444069 atatcgtagaag 7444058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 353
Target Start/End: Original strand, 19090732 - 19090940
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||| |||| ||||| |||||| |||||||| | ||||  | |||||| |||| |||||||||| |||||||||||| |||||||||||||||| |||    
T  19090732 ttcctatagttctacggatcttagacataatataagaaaaaggtcccttacataaaacgtcataat-ttttttagctcaatgttgtgattttattatctc 19090830  T
Q  246 tttacnnnnnnnct-tcc-gcttttcactaccaaatannnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaat 343  Q
    || |         | ||| ||||||||||||| ||||        | ||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  19090831 ttcattttgtttttatcctgcttttcactacctaataatttttttatgcatcatctgaaaataaatcaaatactttatagacaccgaaacaaaataaaat 19090930  T
Q  344 accgtagaag 353  Q
     |||||||||    
T  19090931 gccgtagaag 19090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 24484832 - 24484765
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24484832 aggcaatatctgaaa-taaatcaaatactttatagacaccaaaacaaaataaaataccgtagaagagaa 24484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 22575740 - 22575825
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtg 232  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| ||||||  ||||||| ||||||||||||||||||||    
T  22575740 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatagatcataattttttttagctcattgttgtg 22575825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 14904758 - 14904665
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttat 239  Q
    |||||||||||||| ||| |||| ||||||||||| |||| ||||||||| ||||||| ||||||  ||| || ||||||||||||||||||||    
T  14904758 ttcctagagttttaggggccttaagcataatatgagaaaaaagccccttacataatacatcataaaatttgttggctcattgttgtgattttat 14904665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 19686140 - 19686051
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  19686140 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 19686051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 2554405 - 2554306
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||| |||||||||  |||||||||||||||| |||||  ||||||| ||||||| | ||||| |||||||||||||||||||| |||| |||||||    
T  2554405 ttcctagcgttttacggaccttaggcataatatgaaaaaaggaccccttacataatacattataat-ttttttagctcattgttgtg-tttttttagctc 2554308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 41825719 - 41825818
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||| |||||||||  |||||||||||||||| |||||  ||||||| ||||||| | ||||| |||||||||||||||||||| |||| |||||||    
T  41825719 ttcctagcgttttacggaccttaggcataatatgaaaaaaggaccccttacataatacattataat-ttttttagctcattgttgtg-tttttttagctc 41825816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 6883835 - 6883771
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| || ||| ||||||||    
T  6883835 aggcaacatctgaaaataaatcaaatactccatagacaccaaaacaaaataagatatcgtagaag 6883771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 25415173 - 25415269
Alignment:
Q  153 agttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctcttta 249  Q
    ||||||| ||||| |||||||||||||| ||||  ||||||||  |||||| ||||||  |||| ||||||||||||||| |||| |||||||||||    
T  25415173 agttttatgggtcctaggcataatatgagaaaatggccccttacctaatacatcataaatttttgtagctcattgttgtgctttttttagctcttta 25415269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 27861594 - 27861697
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcat-aatgttttttagctcattgttgtgattttattagct 244  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| | ||||| |||| ||| |||||| | ||||||||||| |||| ||||||    
T  27861594 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacaaaatacatcataaatttttttttggtcattgttgtgttttttttagct 27861692  T
Q  245 cttta 249  Q
    |||||    
T  27861693 cttta 27861697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 31548766 - 31548830
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| | ||||||    
T  31548766 aggcaacatatgaaaataaatcaaatactttataaacaccaaaacaaaataaaatatcatagaag 31548830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 25622168 - 25622073
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttatta 241  Q
    |||||||||||||| |||||||| ||||||||||| ||||   | ||||| ||||||| ||||||  ||| |||| | ||||||||||||||||||    
T  25622168 ttcctagagttttaggggtcttaagcataatatgagaaaatgtctccttacataatacatcataaaatttgttagtttattgttgtgattttatta 25622073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 6221584 - 6221522
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  6221584 caacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaag 6221522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 33015099 - 33015161
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  33015099 caacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaag 33015161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 31548619 - 31548712
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattag 242  Q
    |||||||||||| |||||||| | |||||||| ||||| | |||||| ||||||| | | ||  |||||||| |||||||||| ||||||||||    
T  31548619 ctagagttttacaggtcttagacttaatatgagaaaagggtcccttacataatacataacaaacttttttagttcattgttgttattttattag 31548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 7879938 - 7879994
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||||||  ||||||||||||||||| ||||| |||||||| |||||||||||    
T  7879938 aggcaacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatac 7879994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 33014949 - 33015019
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttt 217  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | |||||| ||||| | ||||||| |||||    
T  33014949 ttcctagagttttacgggtcttatgcataatatgaaaaaag-ggcccttacataatgcatcataattttttt 33015019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 22575892 - 22575950
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtaga 351  Q
    ||||| ||||||||||| ||||||| |||| ||| |||||||||| |||||||||||||    
T  22575892 aacatatgaaaataaattaaatactctatatacaacaaaacaaaataaaataccgtaga 22575950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 44313949 - 44314011
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  44313949 caacatctgaaaataaattaaatattatatatacaccaaaacaaaataaaaataccgtagaag 44314011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 44322128 - 44322190
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  44322128 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 44322190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 45277084 - 45277137
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    ||||||||  ||||||||||||||||| ||||| |||||||| |||||||||||    
T  45277084 caacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatac 45277137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 25622022 - 25621962
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    ||||||||| | ||||||||||| |||||| ||| |||||||||||||| |||||| ||||    
T  25622022 aggcaacatataaaaataaatcagatacttcataaacaccaaaacaaaataaaatatcgta 25621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 44313799 - 44313888
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| ||||| |||||||| | ||||| |  | ||||||||| | ||||||| |||||||||||| ||||||| ||||    
T  44313799 ttcctagagttttacgggccttagacataatataaaaaaag-ggtctttatataatgcatcataat-ttttttagctcactgttgtgttttt 44313888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 19678549 - 19678495
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    ||||||||  ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  19678549 caacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaaaatacc 19678495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 89910 - 89967
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| | |||||| ||||||||||||    
T  89910 aggcaacatctttaaataaatcaaatactccatagaaatcaaaactaaacaaaatacc 89967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 2554253 - 2554208
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||    
T  2554253 caacatctgaaaataaattaaatattctatatacaccaaaacaaaa 2554208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 2566122 - 2566065
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| |||||| |||||    
T  2566122 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaacatacc 2566065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 6271192 - 6271245
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||    
T  6271192 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaaaa 6271245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 11198904 - 11198961
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    |||||||| ||||||||||||||||| |||| ||||||||  |||| |||||| ||||    
T  11198904 caacatctaaaaataaatcaaatactctatatacaccaaagtaaaataaaatagcgta 11198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 29303691 - 29303634
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  |||||||||||| |||  ||||| |||||||| ||||||||||||    
T  29303691 aggcaacatcttcaaataaatcaaaaactccatagaaaccaaaactaaacaaaatacc 29303634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 41825871 - 41825916
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||    
T  41825871 caacatctgaaaataaattaaatattctatatacaccaaaacaaaa 41825916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 14904609 - 14904545
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||| ||||||||||||||   | ||||||||||||||| || |||||| | ||||||    
T  14904609 aggcaacatctcaaaataaatcaaatgtctcatagacaccaaaacataataaaatatcatagaag 14904545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 144 - 349
Target Start/End: Complemental strand, 9138038 - 9137829
Alignment:
Q  144 cattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagc 243  Q
    |||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||| ||| ||  |||||||| |||||||||||||||||||| |    
T  9138038 cattcctagaattttacgggccttaggcataatatgaaaaaagggccccttatataatacttcacaaatttttttagttcattgttgtgattttattaac 9137939  T
Q  244 tct---ttacnnnnnnncttc-cgcttttcactaccaaatannnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaaca 339  Q
    |||   ||          ||| | |||||||||||||||||        ||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  9137938 tcttcattttgtttttatttctcacttttcactaccaaataattttcttaggcaacatctgaaaataaactaaatactttatagaaaccaaaacaaacta 9137839  T
Q  340 aaataccgta 349  Q
    ||||||||||    
T  9137838 aaataccgta 9137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 16730077 - 16729977
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||| |||||||||||||||| ||||  | |||||| ||||||| |||||||  ||||||||||||||||||| |||| |||||||    
T  16730077 ttcctagagttttacgggccttaggcataatatgaaaaaaaggtcccttacataatacatcataattctttttagctcattgttgtgctttt-ttagctc 16729979  T
Q  246 tt 247  Q
    ||    
T  16729978 tt 16729977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 35824466 - 35824371
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttatta 241  Q
    |||||||||||||| |||||| ||||||||||||| |||| | || |||||||||||| | ||||  ||| |||||||||||||||||||||||||    
T  35824466 ttcctagagttttaggggtctaaggcataatatgagaaaataacctcttatataatacattataaaatttgttagctcattgttgtgattttatta 35824371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 3763029 - 3762941
Alignment:
Q  148 cctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||| |||||||||||||||| |||| || |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  3763029 cctagagttttacgggccttaggcataatatgaaaaaaaaggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 3762941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 40971774 - 40971683
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||  ||||||||| |||||||||||||||| ||||| | |||||| ||||||| | ||||| |||||||||||||||||||| ||||    
T  40971774 ttcctagcattttacgggccttaggcataatatgaaaaaagggtcccttacataatacattataattttttttagctcattgttgtgttttt 40971683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 45117803 - 45117713
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||  | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  45117803 ttcctagagttttacgggccttaggcataatatgaaaaaaatggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 45117713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 1981932 - 1981842
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| ||||| |||||||||| ||||| |  ||||||||||| | ||||||| ||||||| |||||||||||| ||||    
T  1981932 ttcctagagttttacgggccttagacataatatgaaaaaag-ggtccttatataatgcatcataattttttttatctcattgttgtgttttt 1981842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 24190099 - 24190161
Alignment:
Q  295 catctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||| ||||    
T  24190099 catctgaaaataaatcaaatactttatagacaccaaaacaaactaaattactgtagaaaagaa 24190161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 28374282 - 28374332
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaat 343  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  28374282 aacatctgaaaataaatcaaatacttcatagacaccaaaacaaaataaaat 28374332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 7972739 - 7972829
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||| ||| |||||||||||||||| ||||| |  ||||| ||||||  ||||||| ||||||| |||||||||||| ||||    
T  7972739 ttcctagagttttatgggccttaggcataatatgaaaaaag-ggtccttacataatagatcataattttttttaactcattgttgtgttttt 7972829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 602039 - 602089
Alignment:
Q  294 acatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  602039 acatctgaaaataaatcaaatacttcatagacaacaaaacaaaataaaata 602089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 9381600 - 9381697
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    ||||||||||| || ||||||||||||||||| ||||   ||||| | ||||||| ||||||  ||| ||||||| ||||||||||||| |||||||||    
T  9381600 ctagagttttaaggatcttaggcataatatgagaaaatgacccct-acataatacatcataaaatttgttagctcgttgttgtgattttgttagctctt 9381697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 23231753 - 23231853
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||||||||||| |||||||| |||||||||| ||||   || |||||||| ||  ||||||  |||||||||||||| || |||||||||||| ||    
T  23231753 ttcctagagttttacaggtcttagacataatatgagaaaatgacctcttatatagtatatcataa-attttttagctcattattatgattttattaggtc 23231851  T
Q  246 tt 247  Q
    ||    
T  23231852 tt 23231853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 6927136 - 6927192
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||||||  ||||||||||||||||| ||||| |||||||| |||||||||||    
T  6927136 aggcaacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatac 6927192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 9381744 - 9381808
Alignment:
Q  290 ggcaacatctgaaaa-taaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||| ||| || ||||||||    
T  9381744 ggcaacatctgaaaaataaatcaaatactccatagacaccaaaacaaaataaagtatcgtagaag 9381808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 11648016 - 11648072
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||||||| |||| |||||||||||| |||||||| ||||||||| |||||||    
T  11648016 aggcaacatctgtaaatcaatcaaatacttcatagacacaaaaacaaaataaaatac 11648072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 16729926 - 16729866
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||| ||||||| |||  |||||||||||||| |||||| ||||||||    
T  16729926 aacatctgaaaataaattaaatactctatgtacaccaaaacaaaataaaatatcgtagaag 16729866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 23231900 - 23231964
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||| | |||||||||||||| || || |||||||||| |||| |||||||||||||||    
T  23231900 aggcaacatccggaaataaatcaaatatttcattgacaccaaaataaaataaaataccgtagaag 23231964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 28516983 - 28516927
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||||||  ||||||||||||||||| ||||| |||||||| |||||||||||    
T  28516983 aggcaacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatac 28516927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 31597720 - 31597658
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  31597720 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 31597658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 45117664 - 45117602
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  45117664 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 45117602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 2878783 - 2878840
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  2878783 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaaaatacc 2878840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 7263540 - 7263584
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||    
T  7263540 aacatctgaaaataaattaaatactatatatacaccaaaacaaaa 7263584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 11647866 - 11647930
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataa 210  Q
    ||||||||||||||| |  ||||| |||||||||| |||||||||||| | ||||||| ||||||    
T  11647866 ttcctagagttttacagaccttagacataatatgagaaaagagcccctaacataatacatcataa 11647930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 24189990 - 24190046
Alignment:
Q  192 cttatataatacgtcataatgttttttagctcattgttgtgattttattagctcttt 248  Q
    |||||| ||||||||||||| |||||||| | |||||| |||||||||||| |||||    
T  24189990 cttataaaatacgtcataattttttttagtttattgttatgattttattagttcttt 24190046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 7263409 - 7263499
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||| |||||||||| |||| ||||||||| | || || |||| ||| ||||||| | ||||| |||||||| ||||||||||| ||||    
T  7263409 ttcctagcgttttacgggccttatgcataatataaaaatagggccc-ttacataatacattataattttttttaggtcattgttgtgttttt 7263499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 31597870 - 31597781
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||||| || |||||||||||||||| ||||| | |||||| |||||   | ||||| |||||||| ||||||||||| ||||    
T  31597870 ttcctagagttttacaggccttaggcataatatgaaaaaag-gacccttacataatggataataat-ttttttagttcattgttgtgttttt 31597781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 35824314 - 35824271
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaa 335  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||    
T  35824314 caacatctgaaaataaatcaaatactccatagacacctaaacaa 35824271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 1981794 - 1981744
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||||||||| ||||| | |||| |||||||||||||| ||||    
T  1981794 caacatctgaaaataaattaaatattctatacacaccaaaacaaaataaaa 1981744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 7972889 - 7972947
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtaga 351  Q
    ||||||||||||||||| |||||||  ||| |||| ||||||||| ||||||| |||||    
T  7972889 aacatctgaaaataaattaaatactcaatatacacaaaaacaaaataaaatactgtaga 7972947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 15663490 - 15663390
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||| |||||||  || ||||| |||||||||| ||||| |||||||| ||||||| || |||  ||| |||||  ||| |||||||||||||| |||    
T  15663490 ttcctatagttttagcgggcttagacataatatgagaaaag-gccccttacataatacatcgtaaaatttgttagcatattcttgtgattttattaactc 15663392  T
Q  246 tt 247  Q
    ||    
T  15663391 tt 15663390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 39906545 - 39906504
Alignment:
Q  191 ccttatataatacgtcataatgttttttagctcattgttgtg 232  Q
    ||||||||||||| | ||||| ||||||||||||||||||||    
T  39906545 ccttatataatacattataattttttttagctcattgttgtg 39906504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 346
Target Start/End: Original strand, 1842782 - 1842963
Alignment:
Q  165 cttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctttacnnnnnnncttccgc 264  Q
    ||||| |||||||||| ||||    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  |        | ||||    
T  1842782 cttagacataatatgagaaaaagatcccttatataatacgtcataattttttttagttcattgttgtgattttattagctctt--catcttttttcccgc 1842879  T
Q  265 ttttcactaccaaat--annnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||||||  |        ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  1842880 ttttcactaccaaataaatattttataggcatcatctaaaaataaatcaaatactttatagacaccaaaacaaaataaaatacc 1842963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 357
Target Start/End: Original strand, 9921504 - 9921668
Alignment:
Q  193 ttatataatacgtcataatgttttttagctcattgttgtgattttattagctctttacnnnnnnncttccgcttttcactaccaaatannnnnnnn--ag 290  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||||||||||||  |        |||||||||||||||| |||||          ||    
T  9921504 ttatataatacgtcatcaacttttttagcttattgttgtgattttattagctctt--catttttttttccgcttttcactactaaatatttttttcttag 9921601  T
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||  |||||| ||||    
T  9921602 gcaacatctgaaaataaatcaaatacttgatagacaccaaaataaaataaaatattgtagaaaagaa 9921668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 10094776 - 10094866
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||||||||| | ||||||| ||||||| |||||||||||| ||||    
T  10094776 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttatataatgcatcataattttttttatctcattgttgtgttttt 10094866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 3665055 - 3665116
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  3665055 caacatctgaaaataaatcaaatactatatagacaccaaaacaaaataaaataccatagaag 3665116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 357
Target Start/End: Original strand, 9896143 - 9896357
Alignment:
Q  143 tcattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattag 242  Q
    |||||| |||||||||| ||  ||||| |||||||||| |||||   |||| |||||||||||||||   |||||||||||||||||||||||||||||     
T  9896143 tcattcttagagttttaaggaccttagacataatatgagaaaaggatccctaatataatacgtcatatatttttttagctcattgttgtgattttattat 9896242  T
Q  243 ctctttacnnnnnnnctt--ccgcttttcactaccaaatannnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaa 340  Q
    | ||| |         ||  || ||||||||||||||           ||||||||| ||||||||||||||||||||  ||||||||||||||||| ||    
T  9896243 cccttcattttgtttttttcccacttttcactaccaatagtttttttaaggcaacatttgaaaataaatcaaatactt--tagacaccaaaacaaaataa 9896340  T
Q  341 aataccgtagaagagaa 357  Q
    ||||||||| |||||||    
T  9896341 aataccgtataagagaa 9896357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 24610839 - 24610939
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||| |||||||||| ||| ||||||||||||||| ||||| |||| ||| ||||||| || |||  |||||||||||||||||||| ||||||||| ||    
T  24610839 ttccgagagttttacaggttttaggcataatatgagaaaagggccc-ttacataatacatcgtaactttttttagctcattgttgtgtttttattagttc 24610937  T
Q  246 tt 247  Q
    ||    
T  24610938 tt 24610939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 28803662 - 28803751
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||  | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  28803662 ttcctagagttttacgggccttaggcataatatga-aaaaatggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 28803751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 39480009 - 39480099
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||| ||| |||||||||||||||| ||||| |  ||||| ||||||  ||||||| |||||||||||||||||||| ||||    
T  39480009 ttcctagagttttatgggccttaggcataatatgaaaaaag-ggtccttacataatagatcataattttttttagctcattgttgtgttttt 39480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 36213928 - 36213870
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtaga 351  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||    
T  36213928 aacatctgaaaataaattaaatactctataaacaccaaaacaaaataaaataccgtaga 36213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 31915665 - 31915604
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| |||||||| ||||||    
T  31915665 caacatctgaaaataaatcaaatacactataaacaccaaaacaaaataaaataccatagaag 31915604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 41508859 - 41508951
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttat 239  Q
    ||||||||||||||| |  |||||||||||||||| |||||  |||||||||| |||  ||||||  |||||||| ||||||||||||||||||    
T  41508859 ttcctagagttttacagaccttaggcataatatga-aaaaggcccccttatatgatatatcataaatttttttagttcattgttgtgattttat 41508951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 353
Target Start/End: Complemental strand, 10142863 - 10142653
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||| ||||||||| ||||| |||| |||||  ||||||| ||||||| || |||  ||| |||||||||| ||||||||| |||| |||    
T  10142863 ttcctagagttttaggggtcttagccataa-atgagaaaaggaccccttacataatacatcttaaaatttgttagctcattattgtgatttaattaactc 10142765  T
Q  246 tttacnnnnnnnctt--ccgcttttcactaccaaat--annnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaa 341  Q
    ||||         ||  ||||||| |||||||||||  |        ||| ||||| |||||||||||||||||||  |||||||||||||||||| |||    
T  10142764 tttatttcatttttttcccgctttccactaccaaataaatattttatagggaacatttgaaaataaatcaaatactgcatagacaccaaaacaaaataaa 10142665  T
Q  342 ataccgtagaag 353  Q
    ||  ||||||||    
T  10142664 atgtcgtagaag 10142653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 25201866 - 25201802
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||| |||||||||||||||||  ||||||||||| |||| | |||||||||||||||    
T  25201866 aggcaacatctaaaaataaatcaaatactccatagacaccaacacaagataaaataccgtagaag 25201802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 7413499 - 7413588
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||| ||||||||||| ||||| | |||||| ||||| | ||||| | |||||||||||||||||||| ||||    
T  7413499 ttcctagagttttacgggccttacgcataatatgaaaaaag-ggcccttacataatgcatcatagt-ttttttagctcattgttgtgttttt 7413588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 7459580 - 7459669
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||| ||||||||||| ||||| | |||||| ||||| | ||||| | |||||||||||||||||||| ||||    
T  7459580 ttcctagagttttacgggccttacgcataatatgaaaaaag-ggcccttacataatgcatcatagt-ttttttagctcattgttgtgttttt 7459669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 51890302 - 51890360
Alignment:
Q  144 cattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataata 202  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| |||||||| ||||||    
T  51890302 cattcctagagttttaggggccttgggcataatatgataaaagggccccttacataata 51890360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 51890575 - 51890633
Alignment:
Q  144 cattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataata 202  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| |||||||| ||||||    
T  51890575 cattcctagagttttaggggccttgggcataatatgataaaagggccccttacataata 51890633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 52460739 - 52460677
Alignment:
Q  292 caacatctgaaaa-taaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||| |||||||||||| || |||||||| |||||||| |||||||||||||||    
T  52460739 caacatctgaaaaataaatcaaatacattgtagacaccgaaacaaaataaaataccgtagaag 52460677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 6261516 - 6261569
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||    
T  6261516 aacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatacc 6261569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 13957952 - 13957876
Alignment:
Q  161 gggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| ||||||| | |||||||||||||| |||||   ||| |||||| |||||| |||||||    
T  13957952 gggtcttaggcataatataataaaagggtcccttatataatacatcatacaatttgttagcttattgttatgatttt 13957876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 10094928 - 10094990
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  10094928 caacatctgaaaataaattaaatattctatacacaccaaaacaaaataaaaataccgtagaag 10094990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 28803800 - 28803862
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  28803800 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 28803862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 39480159 - 39480217
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtaga 351  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||| |||||    
T  39480159 aacatctgaaaataaattaaatactctatatacacaaaaacaaaataaaatactgtaga 39480217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 7413650 - 7413711
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaa 352  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  ||||||||||||||    
T  7413650 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaa 7413711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 7459731 - 7459792
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaa 352  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  ||||||||||||||    
T  7459731 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaa 7459792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 13957820 - 13957758
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||| ||||||||||||||||||| || ||  |||||||||||| |||||| ||||||||    
T  13957820 aggcaacatatgaaaataaatcaaatactctaaag--accaaaacaaaataaaatatcgtagaag 13957758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 20151810 - 20151875
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaaga 354  Q
    ||||||||| | ||||||||| |||||||| ||||| |||||||||||| |||| | |||||||||    
T  20151810 aggcaacattttaaaataaataaaatacttaatagaaaccaaaacaaaataaaaaatcgtagaaga 20151875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 23935651 - 23935708
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatac 203  Q
    |||||||||||||||||| ||||| |||||||||| || || |||||||| |||||||    
T  23935651 ttcctagagttttacgggccttagacataatatgagaagagggccccttacataatac 23935708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 353
Target Start/End: Original strand, 24611000 - 24611056
Alignment:
Q  296 atctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||||| | |||| | |||||||||||| |||||||||||||||    
T  24611000 atctgaaaataaatcaaatattctataaa-accaaaacaaaataaaataccgtagaag 24611056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28143026 - 28143083
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  28143026 aggcaacatctttaaataaatcaaatactccatagaaaccaaaactaaacaaaatacc 28143083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 51338159 - 51338106
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| ||||||||    
T  51338159 aggcaacatcttcaaataaatcaaatactctatagaaaccaaaactaaacaaaa 51338106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 18326867 - 18326779
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||| |||||||  ||||||||| ||||  | || ||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  18326867 ctagagttttacgagtcttagatataatatgagaaaatggtcctttacataatacattataaatttttttagctcattgttgtgttttt 18326779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 18438531 - 18438619
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||| |||||||  ||||||||| ||||  | || ||| ||||||| | ||||  |||||||||||||||||||| ||||    
T  18438531 ctagagttttacgagtcttagatataatatgagaaaatggtcctttacataatacattataaatttttttagctcattgttgtgttttt 18438619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 21320535 - 21320455
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcatt 226  Q
    ||||||||||||| | | ||||||||||||||||| ||||   ||  ||| ||||||||| ||||| ||||||||||||||    
T  21320535 ttcctagagtttttcagatcttaggcataatatgagaaaatgaccatttacataatacgttataattttttttagctcatt 21320455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 6261371 - 6261465
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    ||||||||||||| | |||||||||||||| | ||||||   ||||| ||||||  ||||||| |||||||| ||||||||||| |||| |||||||||    
T  6261371 ctagagttttacgagccttaggcataatataaaaaaaga--tccttacataatagatcataat-ttttttagttcattgttgtg-tttttttagctctt 6261465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 21320396 - 21320346
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||| ||||||    
T  21320396 aacatctgaaaataaatcaaatacttcata-acaccaaaataaaataaaata 21320346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 14032334 - 14032379
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccc 191  Q
    |||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  14032334 ttcctagagttttacgggccttaggcatagtatgaaaaaagggccc 14032379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 14191891 - 14191948
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| |||||| |||||    
T  14191891 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaacatacc 14191948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 36214065 - 36213967
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||  ||| | |||||||||| ||||| | |||||| ||||||  ||||||| |||||||| ||||||| ||| |||| |||||||    
T  36214065 ttcctagagttttacggacctt-gacataatatgaaaaaag-ggcccttacataatagatcataattttttttagttcattgtagtg-tttttttagctc 36213969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 357
Target Start/End: Complemental strand, 29714304 - 29714093
Alignment:
Q  153 agttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcat-aatgttttttagctcattgttgtgattttattagctcttta-- 249  Q
    ||||||||||| |||||||||||||||| ||| | | ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| |      
T  29714304 agttttacgggccttaggcataatatgagaaagg-gtcccttatataatatgtcattaattttttttagctcattgttgtgattttattagctcttcatt 29714206  T
Q  250 ----cnnnnnnncttccgcttttcactaccaaat-annnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
                 |||||||||||||||| |||| |        |||||| || ||||||||||||||||||||||||||||||||||||||  ||||||    
T  29714205 ttgtttttcttttttccgcttttcactactaaataattttttgtaggcaatatttgaaaataaatcaaatactttatagacaccaaaacaaactaaaata 29714106  T
Q  345 ccgtagaagagaa 357  Q
    |||||||||||||    
T  29714105 ccgtagaagagaa 29714093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 152 - 344
Target Start/End: Original strand, 44662937 - 44663134
Alignment:
Q  152 gagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagct----ctt 247  Q
    ||||||||  || ||||| |||||||| | ||||  |||||||||||||||| || |||| ||||||||||||||||||||||||||||||||    |||    
T  44662937 gagttttataggccttagacataatataagaaaaaggccccttatataatacatcgtaattttttttagctcattgttgtgattttattagctcttcctt 44663036  T
Q  248 tacnnnnnnncttccgcttttcactaccaaat-annnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
    |          | ||||||||||||||||||| |        || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44663037 ttgtttttttttcccgcttttcactaccaaataattttttatagacaatatctgaaaataaatcaaatactttatagacaccaaaataaaacaaaata 44663134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 16876635 - 16876724
Alignment:
Q  153 agttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattag 242  Q
    |||||||| || |||||||||||||||| ||||| ||||| || ||||||| ||||||| |||||||| |||||||||||||||||||||    
T  16876635 agttttacaggccttaggcataatatgagaaaagggccccatacataatacatcataattttttttagttcattgttgtgattttattag 16876724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 40145823 - 40145736
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatt 235  Q
    ||||||||||||||| ||||||||||||||||||| ||||  ||||  || ||||||| ||||||| |||||||| ||||||||||||||    
T  40145823 ttcctagagttttacaggtcttaggcataatatgagaaaatggccc--tacataatacatcataattttttttagatcattgttgtgatt 40145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 10992836 - 10992897
Alignment:
Q  296 atctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||    
T  10992836 atctgaaaataaatcaaatattttatagacaccaaaacaaaataaagtaccgtaaaagagaa 10992897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 10993918 - 10994007
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||  | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  10993918 ttcctagagttttacgggccttaggcataatatga-aaaaatggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 10994007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 25071989 - 25071901
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||  |||| ||  ||||| ||||| | ||||||| ||||||||||||||||||| |||||    
T  25071989 ttcctagagttttacgggccttaggcataatatg--aaaaaaggtccttacataatgcatcataat-ttttttagctcattgttgtaatttt 25071901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 3917610 - 3917665
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccg 347  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  3917610 caacatttgaaaataaatcaaatactctattgacaccaaaacaaaataaaataccg 3917665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 27941272 - 27941361
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||| | || || |||||| | ||||||| |||||||||||| ||||||| ||||    
T  27941272 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcctttctataatgcatcataat-ttttttagctcactgttgtgttttt 27941361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 33100338 - 33100397
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaa 352  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| ||||| || |||||    
T  33100338 aacatttgaaaataaatcaaatactctatagacaccaaaacaaaataaaatgccttagaa 33100397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 47185550 - 47185487
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaa 352  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||| | |||||| |||||||    
T  47185550 aggcaacatctaaaaataaatcaaatactctatagacatcaaaacaacataaaatatcgtagaa 47185487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 19157291 - 19157229
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  19157291 caacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaag 19157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 25071841 - 25071779
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  25071841 caacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaag 25071779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 44880017 - 44879955
Alignment:
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||| ||||||  |||||||    
T  44880017 gcaacatctgaatataaatcaaatacttcttagacaccaaaacaaaataaaatattgtagaag 44879955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 11830155 - 11830246
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttat 239  Q
    ||||||||||||||| |  |||||||||||||||| ||||| |||||||| ||| ||  ||||||| |||||| | ||||||||||||||||||    
T  11830155 ttcctagagttttacagaccttaggcataatatgagaaaagggccccttacatatta-atcataat-ttttttcgttcattgttgtgattttat 11830246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 12893501 - 12893437
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||| || | ||||||||| |||||    
T  12893501 aggcaacatatgaaaataaatcaaatactctatatacaccaaaataatataaaataccgcagaag 12893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 15761206 - 15761117
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||||| |  |||| ||||||||||| ||||| | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  15761206 ttcctagagttttacagaccttaagcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 15761117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 10994055 - 10994117
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  10994055 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 10994117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 6584171 - 6584110
Alignment:
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaa 352  Q
    |||||||||  |||||||||||||| | |||||| |||||||| |||||||||||| |||||    
T  6584171 gcaacatcttcaaataaatcaaatattctatagaaaccaaaactaaacaaaataccatagaa 6584110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 31884535 - 31884592
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  31884535 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaaaatacc 31884592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 33100188 - 33100228
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaag 186  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  33100188 ttcctagagttttacaggtcttaggcataatatgagaaaag 33100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 52448339 - 52448295
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||    
T  52448339 aacatctgaaaataaattaaatactctatatacaccaaaacaaaa 52448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 248
Target Start/End: Complemental strand, 1425105 - 1425002
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttt-tttagctcattgttgtgattttattagct 244  Q
    ||||||||||||||  || ||||||||| ||||||  |||| |||||||  ||| ||  | ||||| ||| |||||||||||||||||||||||| || |    
T  1425105 ttcctagagttttataggccttaggcatgatatgaataaagggccccttgcatattatattataatttttatttagctcattgttgtgattttatcaggt 1425006  T
Q  245 cttt 248  Q
    ||||    
T  1425005 cttt 1425002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 19157441 - 19157352
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||| |||||| |||| | ||||||||| ||||| | |||||| ||||| | ||||||| ||||||| |||||||||||| ||||    
T  19157441 ttcctagagttctacgggccttaagtataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttatctcattgttgtgttttt 19157352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 47185693 - 47185603
Alignment:
Q  150 tagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttatta 241  Q
    |||||||||| |  ||||||||||||||||| |||||| || |||| |||| |||||||||   || ||||||| || ||||||||||||||    
T  47185693 tagagttttaagattcttaggcataatatgagaaaaga-cctcttacataacacgtcataaaaattgttagctcgttattgtgattttatta 47185603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 15761057 - 15760995
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||| ||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  15761057 caacatttgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 15760995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 27941422 - 27941484
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    ||||||||||| |||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  27941422 caacatctgaatataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 27941484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 53076874 - 53076924
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||||||||| ||||| | |||| |||||||||||||| ||||    
T  53076874 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaa 53076924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 1418215 - 1418260
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccc 191  Q
    ||||||||||||||| || |||||||||||||||| ||||| ||||    
T  1418215 ttcctagagttttacaggccttaggcataatatgaaaaaagggccc 1418260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 6024331 - 6024388
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| |||||| |||||    
T  6024331 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaacatacc 6024388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 23044482 - 23044535
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||    
T  23044482 aggcaacatcttcaaataaatcaaatactcaatagaaaccaaaactaaacaaaa 23044535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 36641872 - 36641827
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccc 191  Q
    |||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  36641872 ttcctagagttttacgggccttaggcatagtatgaaaaaagggccc 36641827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 36641667 - 36641619
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||||||| |||||||||||||||||  ||||| ||||| ||||||    
T  36641667 aggcaacatcttaaaataaatcaaatactcaatagaaaccaatacaaaa 36641619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 353
Target Start/End: Complemental strand, 15060491 - 15060279
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||| ||||||| ||| |||| ||||||||||| ||||| | |||||| | ||||| ||||||  |||||||||||||||||||| ||||||||||||    
T  15060491 ttcctaaagttttatgggccttatgcataatatgagaaaagggtcccttacaaaatacatcataaaattttttagctcattgttgtgtttttattagctc 15060392  T
Q  246 ttta-----cnnnnnnncttccgcttttcactaccaaatannnnnnnnaggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaa 340  Q
    ||||              || ||||||||| |||||||||        || |||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  15060391 tttatttcgttttttttatttcgcttttcattaccaaataatgttgttagacaacatctgaaaataaatcaaatactctatagacaccaaaacaaaataa 15060292  T
Q  341 aataccgtagaag 353  Q
    |||||| ||||||    
T  15060291 aataccatagaag 15060279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 31130277 - 31130178
Alignment:
Q  150 tagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctcttta 249  Q
    ||||||||||||| ||||||||||||||||| ||||  | |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||    
T  31130277 tagagttttacggatcttaggcataatatgagaaaatggtcccttatataatacgtcataattttttttagttcattattgtgattttattagttcttta 31130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 22525071 - 22525003
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  22525071 aggcaacatctgaaaataaatcaaatactttatagacatcaaaacaaaataaaataccatagaagagaa 22525003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 13758347 - 13758440
Alignment:
Q  154 gttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    ||||||| |||| |||||||||||||| ||||  |||||||| ||||||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  13758347 gttttacaggtcgtaggcataatatgagaaaaatgccccttacataatacatcataattttttttagctcattgttgtgtttttattaactctt 13758440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 357
Target Start/End: Original strand, 3228820 - 3229034
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||||||||||||||||||||  |||||||||  || | |  | |||||||||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  3228820 ttcctagagttttacgggtcttagatataatatgagtaatg-gttcattatataatatgtcgtaattttttttaactcattgttgtgattttattagctc 3228918  T
Q  246 tttacnnnnnnnctt---ccgcttttcactaccaaatannnnnnnnaggc-aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaa 341  Q
    || |         ||   ||||||||||||||||||||          || ||||| |||||||||||||||||| ||||| | |||||||||||| |||    
T  3228919 ttcattttgttttttttcccgcttttcactaccaaataatttttttttgccaacatttgaaaataaatcaaatacattataaataccaaaacaaaataaa 3229018  T
Q  342 ataccgtagaagagaa 357  Q
    ||||||||||||||||    
T  3229019 ataccgtagaagagaa 3229034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 13758492 - 13758553
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  13758492 caacatatgaaaataaatcaaatactctatagacaccaaaacagaataaaataccgtagaag 13758553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 357
Target Start/End: Complemental strand, 19108289 - 19108224
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||  |||||| ||||    
T  19108289 caacatctaaaaataaatcaaataatttatagacaccaaaacaaaataaaataatgtagaaaagaa 19108224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 1603719 - 1603630
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||| | ||||| | |||||| ||||| | ||||||| ||||||| |||||||||||| ||||    
T  1603719 ttcctagagttttacgggccttaggcataatataaaaaaag-ggcccttacataatgcatcataat-ttttttatctcattgttgtgttttt 1603630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 21442930 - 21442849
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgtt 229  Q
    |||||||||||||| | |||||||||||||||||| ||||| | |||||||||||| | ||||||| ||||||| |||||||||    
T  21442930 ttcctagagttttatgagtcttaggcataatatgaaaaaag-gacccttatataatgcatcataat-ttttttatctcattgtt 21442849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 34043892 - 34043803
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||| ||||||||||| ||||| | |||||| ||||| | ||||||| ||||||| |||||||||||| ||||    
T  34043892 ttcctagagttttacgggccttacgcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttatctcattgttgtgttttt 34043803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 350
Target Start/End: Complemental strand, 1423152 - 1423094
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtag 350  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| |||||| |||||    
T  1423152 caacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatatcgtag 1423094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 11680231 - 11680332
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatga-taaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagct 244  Q
    ||||||||||||||   ||||||| |||||||||| ||||||| ||| ||| ||||||| || |||  ||| ||||||||||||||||||||||||| ||    
T  11680231 ttcctagagttttagaagtcttagacataatatgagtaaaaga-cccattacataatacatcgtaaaatttgttagctcattgttgtgattttattaact 11680329  T
Q  245 ctt 247  Q
    |||    
T  11680330 ctt 11680332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 21442835 - 21442773
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  21442835 caacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaag 21442773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 34043742 - 34043680
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  34043742 caacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaag 34043680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 18675550 - 18675498
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||    
T  18675550 caacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaata 18675498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 30359030 - 30358982
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||    
T  30359030 aggcaacatctgaaaataaatcaaatactccatagacactaaaacaaaa 30358982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 33516205 - 33516261
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||||||  ||||||||||||||||| ||||| |||||||| |||||||||||    
T  33516205 aggcaacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatac 33516261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 26817814 - 26817755
Alignment:
Q  294 acatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||| ||||||||||||||||| |||||||||  |||||||| |||||| ||||||||    
T  26817814 acatctaaaaataaatcaaatactgtatagacactcaaacaaaataaaatatcgtagaag 26817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 1603567 - 1603505
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| |||||||| |||||  |||||||||||||||    
T  1603567 caacatctgaaaataaattaaatattttatacacaccaaaccaaaataaaaataccgtagaag 1603505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 22012022 - 22012084
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  22012022 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 22012084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 31130123 - 31130065
Alignment:
Q  299 tgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||||||||||||||||||| | |||| ||||||||| |||| ||| ||||||||||    
T  31130123 tgaaaataaatcaaatactttacaaacactaaaacaaaataaaaaaccttagaagagaa 31130065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 15603684 - 15603745
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||| |||||| | ||||||    
T  15603684 caacatctgaaaataaatcaaatacttcataaacattaaaacaaaataaaatatcatagaag 15603745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 26817959 - 26817918
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaaga 187  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  26817959 ttcctatagttttacgggtcttaggcataatatgagaaaaga 26817918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 11680381 - 11680440
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||| | ||||||||||||| | |||||||| |||||| ||||||||    
T  11680381 aacatctgaaaataaatctattactttatagaca-ctaaacaaaataaaatatcgtagaag 11680440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 20990635 - 20990591
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||    
T  20990635 aacatctgaaaataaattaaatactctatatacaccaaaacaaaa 20990591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 30359847 - 30359799
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||||||||||||||||| |||||||  |||||||| |||||||||    
T  30359847 aggcaacatctgaaaataaataaaatactccatagacactaaaacaaaa 30359799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 1213330 - 1213241
Alignment:
Q  156 tttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    |||||||  ||||| |||||| ||| |||| | ||||||| ||||||| |  |||| |||||||||||||||||||| ||||||||||||||    
T  1213330 tttacggaccttagacataatgtgagaaaaaa-ccccttacataatacattttaat-ttttttagctcattgttgtgtttttattagctctt 1213241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 1423302 - 1423213
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||| | |||||||||||||||| ||||| | |||||| ||||||| ||||||    ||||| |||||||||||| ||||    
T  1423302 ttcctagagttttacgagccttaggcataatatga-aaaag-ggcccttacataatacatcataactaattttaactcattgttgtgttttt 1423213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 18675700 - 18675611
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||| ||| |||| ||||||||||| ||||| | |||||| ||||||| |||||||   ||||| |||||||||||| ||||    
T  18675700 ttcctagagttttatgggccttaagcataatatga-aaaag-ggcccttacataatacatcataattaattttaactcattgttgtgttttt 18675611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 22011872 - 22011961
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| ||||| |||||||| | ||||| |  | ||||||||| | ||||||| |||||||||||| ||||||| ||||    
T  22011872 ttcctagagttttacgggccttagacataatataaaaaaag-ggtctttatataatgcatcataat-ttttttagctcactgttgtgttttt 22011961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 1131969 - 1131910
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||| ||||||||| ||||||| ||||  ||||||||||||| |||||| ||||||||    
T  1131969 caacatctaaaaataaattaaatactctata--caccaaaacaaaataaaatatcgtagaag 1131910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 14678726 - 14678822
Alignment:
Q  154 gttttacgggtcttaggcataatatgataaaagagccccttat---ataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    |||||||||| ||||| |||||||||| ||||  | |||||||   ||||||| ||||||  |||||||||||  | |||||||||| |||||||||    
T  14678726 gttttacgggccttagacataatatgaaaaaatggtcccttatataataatacatcataaatttttttagctctcttttgtgattttgttagctctt 14678822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 15603541 - 15603623
Alignment:
Q  155 ttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||| |||| | |||||||||||| |||||  ||||||||||||||  ||||||  |||||||| | ||||||||| ||||    
T  15603541 ttttacaggtcgttggcataatatgagaaaaggaccccttatataataaatcataaatttttttagtttattgttgtgttttt 15603623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 4064847 - 4064900
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    ||||||||||  |||||||||||||||||  ||||| ||| |||||||||||||    
T  4064847 aggcaacatcgtaaaataaatcaaatactcaatagaaaccgaaacaaaacaaaa 4064900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 14678252 - 14678195
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| | |||||| ||||||||||||    
T  14678252 aggcaacatctttaaataaatcaaatactccatagaaatcaaaactaaacaaaatacc 14678195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 20990787 - 20990688
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||| |||||||||| |||||||||||||| | || || | |||||| ||||||| | ||||| ||||||||  ||||| |||| |||| |||||||    
T  20990787 ttcctagcgttttacgggccttaggcataatataaaaatag-ggcccttacataatacattataattttttttaggccattgctgtg-tttttttagctc 20990690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 247
Target Start/End: Complemental strand, 18617109 - 18617081
Alignment:
Q  219 agctcattgttgtgattttattagctctt 247  Q
    |||||||||||||||||||||||||||||    
T  18617109 agctcattgttgtgattttattagctctt 18617081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 9023776 - 9023676
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||  |||||||||||||||| ||| || ||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  9023776 ttcctagagttttacggaccttaggcataatatgagaaagga-ccccttacataatacatcataattttttttagctcattgttgtgtttttattagctc 9023678  T
Q  246 tt 247  Q
    ||    
T  9023677 tt 9023676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 42055719 - 42055783
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42055719 aggcaacatatgaaaataaatcaaatactttatagacaccaaaacaaaataaaataccgtagaag 42055783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 47396855 - 47396956
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||||||||||  ||||||||||||||||||| |||||| ||||||| ||||| | ||||||  || ||||| ||||||||||| ||||||| ||||    
T  47396855 ttcctagagttttataggtcttaggcataatatgagaaaagaaccccttacataattcatcataaatttgtttagttcattgttgtgtttttattggctc 47396954  T
Q  246 tt 247  Q
    ||    
T  47396955 tt 47396956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 48646647 - 48646543
Alignment:
Q  143 tcattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattag 242  Q
    ||||||||||||||||| |   |||||||||||||||| ||||  |||||||| || |||| ||||||  ||| |||||||||| |||||||||||||||    
T  48646647 tcattcctagagttttaggacccttaggcataatatgagaaaaatgccccttaaatgatacatcataaaatttgttagctcattattgtgattttattag 48646548  T
Q  243 ctctt 247  Q
    |||||    
T  48646547 ctctt 48646543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 27430553 - 27430643
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||||| || |||||||||||||||| |||| || |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  27430553 ttcctagagttttacaggccttaggcataatatgaaaaaaaaggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 27430643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 48999750 - 48999661
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  48999750 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 48999661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 48596107 - 48596196
Alignment:
Q  147 tcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||||||||||||||||| | ||||  | |||||||||||| | ||||||| ||||||| |||||||||||| ||||    
T  48596107 tcctagagttttacgggtcttaggcataatat-agaaaaagggcccttatataatgcatcataattttttttatctcattgttgtgttttt 48596196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 17967078 - 17967169
Alignment:
Q  144 cattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |  ||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  17967078 cattcctagagttttacgggccttaggcataatatgaaaaaag-gatccttacataatgcatcataat-ttttttagctcattgttgtgttttt 17967169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 23663865 - 23663964
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||  | ||||||| |||||||  ||||||||||||||||||| |||| |||||||    
T  23663865 ttcctagagttttacgggccttaggcataatatgaaaaaag-gtccccaacataatacatcataattctttttagctcattgttgtgctttt-ttagctc 23663962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 44310845 - 44310784
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||| ||||||||    
T  44310845 caacatctgaaaataaatcaaatactctatacacaccaaaacaaaataaaatatcgtagaag 44310784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 5049802 - 5049714
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| | |||||||||||||| |||| || |||||||||||| | ||||||  |||||||||||||||||||| ||||    
T  5049802 ttcctagagttttacgggccctaggcataatatga-aaaaaaggcccttatataatgcatcataa--ttttttagctcattgttgtgttttt 5049714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 26465413 - 26465323
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||  | || ||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  26465413 ttcctagagttttacgggccttaggcataatatgaaaaaaagggcctttacataatgcatcataat-ttttttagctcattgttgtgttttt 26465323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 25095516 - 25095417
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||| |||||||||||||||| | ||| | |||| | ||||||| |||||||  ||||||||||| ||||||| |||| |||||||    
T  25095516 ttcctagagttttacgggccttaggcataatatgaaagaag-gtccctaacataatacatcataattctttttagctcactgttgtgctttt-ttagctc 25095419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 21906727 - 21906638
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||| ||||| ||| |||||||||||||||| ||||| | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  21906727 ttcctagaattttatgggccttaggcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 21906638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 22070701 - 22070639
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  22070701 caacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaag 22070639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 48646498 - 48646436
Alignment:
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||| |||||| ||||||||    
T  48646498 gcaacatctgaaaataaatcaaataatctatatacaccaacacaaaataaaatatcgtagaag 48646436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 9023621 - 9023564
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||| |||||| ||||    
T  9023621 caacatctgaatataaattaaatactctatagacaccaaaacaaaataaaatatcgta 9023564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 23664014 - 23664075
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||| |||||| ||||||||    
T  23664014 caacatctgaaaataaattaaatactctatgtacaccaaaacaaaataaaatatcgtagaag 23664075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 48596258 - 48596320
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  48596258 caacatctgaaaataaattaaatattctatacacaccaaaacaaaataaaaataccgtagaag 48596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 8737660 - 8737720
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataa 210  Q
    ||||||||||||||| |||||||||||||||| ||||| | |||||| ||||||| ||||||    
T  8737660 ctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatacatcataa 8737720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 12783463 - 12783524
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||| |||||||||||||||||| ||| |||||||||||| | ||||||  |||||||    
T  12783463 caacatcttaaaataaatcaaatacttcataaacaccaaaacaatataaaatattgtagaag 12783524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 28945390 - 28945447
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||||||    
T  28945390 aggcaacatctttaaataaatcaaatactccatagaaaccaaaactaaacaaaatacc 28945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 36297211 - 36297158
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| ||||||||    
T  36297211 aggcaacatcttcaaataaatcaaatactctatagaaaccaaaactaaacaaaa 36297158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 42055572 - 42055670
Alignment:
Q  144 cattcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagc 243  Q
    |||| |||||||||||||||||   |||||||||||| ||| | | |  ||||||||||| | ||||| |||||||| ||||||||||| ||||||||||    
T  42055572 catttctagagttttacgggtc---ggcataatatgaaaaatg-gtctattatataatacattataat-ttttttagttcattgttgtgtttttattagc 42055666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 42722746 - 42722693
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| ||||||||    
T  42722746 aggcaacatcttcaaataaatcaaatactctatagaaaccaaaactaaacaaaa 42722693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 12028326 - 12028266
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||| |||||||||| || |||||||| ||||||||| |||||| | ||||||    
T  12028326 aacatctgaaaacaaatcaaatatttcatagacacaaaaacaaaataaaatatcctagaag 12028266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 22070849 - 22070761
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| ||||||||| |||||| ||||| | |||||| ||||| | ||||||| ||||| | |||||||||||| ||||    
T  22070849 ttcctagagttttacgggccttaggcattatatga-aaaag-ggcccttacataatgcatcataat-tttttgaactcattgttgtgttttt 22070761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 47559240 - 47559294
Alignment:
Q  290 ggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||| ||||||||||||||||||| |||| ||||||||| |||| |||||||    
T  47559240 ggcaacat-tgaaaataaatcaaatactctataaacaccaaaataaaataaaatac 47559294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 353
Target Start/End: Original strand, 5208349 - 5208411
Alignment:
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||| ||| |||||||||||||  ||| ||||||||| |||| |||||| ||||||||    
T  5208349 gcaacatctaaaagtaaatcaaatactccataaacaccaaaataaaataaaatatcgtagaag 5208411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 17967230 - 17967292
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||| ||||||||||  |||||||||||||||    
T  17967230 caacatctgaaaataaattaaatattctatatacatcaaaacaaaataaaaataccgtagaag 17967292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 21906577 - 21906515
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| |||||   |||| ||||||||||||||  |||||||||||||||    
T  21906577 caacatctgaaaataaattaaatatcctatatacaccaaaacaaaataaaaataccgtagaag 21906515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 26465275 - 26465225
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||||||||| ||||| | |||| |||||||||||||| ||||    
T  26465275 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaa 26465225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 27430704 - 27430754
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||||||||| ||||| | |||| |||||||||||||| ||||    
T  27430704 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaa 27430754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 33048695 - 33048729
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatga 180  Q
    ||||||||||||||||||||||||||||| |||||    
T  33048695 ttcctagagttttacgggtcttaggcatagtatga 33048729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 34307352 - 34307402
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||||||||| ||||| | |||| |||||||||||||| ||||    
T  34307352 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaa 34307402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 9371561 - 9371606
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccc 191  Q
    |||||| |||||||||||||||||||||| ||||| ||||| ||||    
T  9371561 ttcctaaagttttacgggtcttaggcatagtatgaaaaaagggccc 9371606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 12783337 - 12783414
Alignment:
Q  171 cataatatgataaaagagccccttatataatacgtcataatgtttt-ttagctcattgttgtgattttattagctctt 247  Q
    |||||||||| ||||| |||||||| | || || | ||||| |||| ||||||||||||| |||||| ||||||||||    
T  12783337 cataatatgagaaaagcgccccttacacaacacattataatttttttttagctcattgttatgatttcattagctctt 12783414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 26222211 - 26222154
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| |||||| |||||    
T  26222211 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaacatacc 26222154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 32175707 - 32175747
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaag 186  Q
    |||||||||||||||||||||| |||||| ||||| |||||    
T  32175707 ttcctagagttttacgggtcttgggcatagtatgaaaaaag 32175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 34307003 - 34307089
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||| || |||||||| ||||||| |||| || |||||| |||||   ||||||| ||||||| |||||||||||| ||||    
T  34307003 ctagagttttacaggccttaggcacaatatga-aaaaaaggcccttacataatggatcataat-ttttttaactcattgttgtgttttt 34307089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 6769109 - 6769202
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttat 239  Q
    ||||||||||||||| || |||| ||||||||||| |||||  ||||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  6769109 ttcctagagttttacaggccttaagcataatatgagaaaaggtccccttagataatacatcataattttttttagctcattgttgtgattttat 6769202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 42879941 - 42879842
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| ||||||  ||||||| |||||||||||||||||||| |||| |||||||    
T  42879941 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatagatcataattttttttagctcattgttgtg-tttttttagctc 42879844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 43170780 - 43170881
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||| ||||| | | |||||||||| ||||  |||||||| ||||||| |||||| |||| ||||||||||| ||||||||||||| |||    
T  43170780 ttcctagagttttaggggtcatggacataatatgaaaaaatggccccttacataatacatcataaagtttgttagctcattgatgtgattttattaactc 43170879  T
Q  246 tt 247  Q
    ||    
T  43170880 tt 43170881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 16686640 - 16686700
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  16686640 aggcaacatctgaaaataaatcagatacttcatagacaccaaaacaaaataaaataccgta 16686700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 43170925 - 43170989
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||||||    
T  43170925 aggcaacatctgaaaataaatcaaatactctttagacaccaaaacaaaataaaatatcgtagaag 43170989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 5578365 - 5578464
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||||||| |||| ||||||||||| |||| || |||||| ||||||| |||||||  ||||||||||||||| ||| |||| |||||||    
T  5578365 ttcctagagttttacgggccttaagcataatatga-aaaaaagtcccttacataatacatcataattctttttagctcattgtagtgctttt-ttagctc 5578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 13820518 - 13820579
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||    
T  13820518 caacatctgaaaacaaatcaaatacctcatagacaccaaaacaaaataaaataccgtagaag 13820579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 29789997 - 29789933
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||| |||||| ||||||||    
T  29789997 aggcaacatctgaaaataaatcaaatattctatagataccaaaacaaaataaaatatcgtagaag 29789933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 8805780 - 8805882
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    ||||||||||||||| ||  ||||||| |||| || ||||  || ||||| ||||||| ||||||| |||||||||||||||||||| ||||||||| ||    
T  8805780 ttcctagagttttacaggctttaggca-aatacgagaaaaaggcaccttacataatacatcataattttttttagctcattgttgtgtttttattaggtc 8805878  T
Q  246 ttta 249  Q
    ||||    
T  8805879 ttta 8805882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 29150794 - 29150737
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  29150794 caacatctaaaaataaatcaaatacttcatagataccaaaacaaaataaaataccgta 29150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 16039914 - 16039973
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  16039914 aacatctaaaaataaatcaaatactctatagacaccaaaacaaaataaaa-accgtagaag 16039973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 2677314 - 2677225
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||| | ||||| | |||||| ||||| | ||||||| ||||||| |||||||||||| ||||    
T  2677314 ttcctagagttttacgggccttaggcataatataaaaaaag-ggcccttacataatgcatcataat-ttttttatctcattgttgtgttttt 2677225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 9409318 - 9409408
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||| |||||||||||||||||||| ||||| |  | ||| ||||||  ||||||| |||||||||| ||||||||| ||||    
T  9409318 ttcctagagttttatgggtcttaggcataatatgaaaaaag-ggtcattacataatagatcataattttttttagcttattgttgtgttttt 9409408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 23963197 - 23963108
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||||  || |||||||||||||||| ||||| | |||||| ||||| | ||||||| |||||||||||||||||||| ||||    
T  23963197 ttcctagagttttataggccttaggcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttagctcattgttgtgttttt 23963108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 38915388 - 38915491
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttt-tttagctcattgttgtgattttattagct 244  Q
    ||||||||||||||| || ||||||||| ||||||  |||| |||||||| ||| ||  | ||||| ||| |||||||||||||||||||||||| || |    
T  38915388 ttcctagagttttacaggccttaggcatgatatgaataaagggccccttacatattatattataatttttatttagctcattgttgtgattttatcaggt 38915487  T
Q  245 cttt 248  Q
    ||||    
T  38915488 cttt 38915491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 18889266 - 18889204
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  18889266 caacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaag 18889204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 8379472 - 8379536
Alignment:
Q  161 gggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcatt 226  Q
    |||||||||||||||||||| ||||   || |||||||||||||||||||| ||||||||||||||    
T  8379472 gggtcttaggcataatatgagaaaaagacctcttatataatacgtcataat-ttttttagctcatt 8379536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 13490587 - 13490526
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| |||||  ||||||||    
T  13490587 caacatctgaaaataaattaaatactctatatacaccaaaacaaaataaaatgtcgtagaag 13490526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 37135285 - 37135221
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||| | |||||| | ||||||    
T  37135285 aggcaacgtctgaaaataaatcaaatactccatagacaccaaaacaacataaaatatcttagaag 37135221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 13382356 - 13382445
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    ||||||||||||||| || |||||||||||||||| ||||| | |||||| |||||   ||||||| |||||||||||| ||||||| ||||    
T  13382356 ttcctagagttttacaggccttaggcataatatgaaaaaag-ggcccttacataatggatcataat-ttttttagctcaatgttgtgttttt 13382445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 13825720 - 13825815
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctcttt 248  Q
    ||||||||||||||||| |||||||||||||| ||||  | |||||| ||    | ||||||| |||||||| |||||||| || |||||||||||||||    
T  13825720 ctagagttttacgggtcctaggcataatatgagaaaaatgtcccttacat----catcataat-ttttttagttcattgttatgtttttattagctcttt 13825814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 2677162 - 2677100
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| |||||||| |||||  |||||||||||||||    
T  2677162 caacatctgaaaataaattaaatattttatacacaccaaaccaaaataaaaataccgtagaag 2677100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 13382506 - 13382568
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  13382506 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 13382568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 13825865 - 13825920
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    |||||||| |||||||||||||||||  | |||||| |||||||||||||||||||||    
T  13825865 caacatctaaaaataaatcaaatact--acagacacaaaaacaaaacaaaataccgta 13825920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 23963048 - 23962986
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||||||||||||  |||||||||||||||    
T  23963048 caacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaaataccgtagaag 23962986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 37135431 - 37135333
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    ||||||||||| | |||||||||||||||||| ||| || | ||||| |||| || ||||||     ||||||||||| ||||| ||||||||||||||    
T  37135431 ctagagttttaagtgtcttaggcataatatgagaaatgaactccttacataaaacttcataaaaaaatttagctcattcttgtgtttttattagctctt 37135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 39537172 - 39537271
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataa-tgttttttagctcattgttgtgattttattagct 244  Q
    ||||||||||||| | || |||| ||||||||||| ||||| | |||||| ||||||| |||||| |||||||||||||||| ||||| |||| ||||||    
T  39537172 ttcctagagttttgcaggccttatgcataatatga-aaaag-ggcccttacataatacatcataagtgttttttagctcattcttgtg-tttttttagct 39537268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 5578515 - 5578572
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgta 349  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||| |||||| ||||    
T  5578515 caacatctgaaaataaattaaatactctatgtacaccaaaacaaaataaaatatcgta 5578572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Original strand, 21491705 - 21491758
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    ||||||||| | |||||||||||||||||  ||||| |||||||||||||||||    
T  21491705 aggcaacattttaaaataaatcaaatactcaatagaaaccaaaacaaaacaaaa 21491758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 5120416 - 5120468
Alignment:
Q  301 aaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||| ||||||  ||| |||||||||||||| |||||||||||||||    
T  5120416 aaaataaatccaatactccataaacaccaaaacaaaataaaataccgtagaag 5120468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 38491558 - 38491506
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||  ||||||||||||||||| ||||| |||||||| |||||||||||    
T  38491558 aacatcttcaaataaatcaaatacttcatagaaaccaaaactaaacaaaatac 38491506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 353
Target Start/End: Original strand, 39537307 - 39537367
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||| ||||| | |||| |||||||||||||| |||||| | ||||||    
T  39537307 aacatctgaaaataaattaaatattctatatacaccaaaacaaaataaaatatcttagaag 39537367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 42879785 - 42879733
Alignment:
Q  299 tgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtaga 351  Q
    ||||||||||| ||||||| |||| |||||||||||||| |||||||| ||||    
T  42879785 tgaaaataaattaaatactctatatacaccaaaacaaaataaaataccataga 42879733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 9409468 - 9409518
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaat 343  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||||| |||||    
T  9409468 aacatctgaaaataaattaaatactctatatacacaaaaacaaaataaaat 9409518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 13490724 - 13490623
Alignment:
Q  149 ctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcat-aatgttttttagctcattgttgtg-attttattagctct 246  Q
    |||||||||||| || |||||||||||||||| ||||| | || ||| ||||||| | || ||| |||||| |||||||||||||  |||| ||||||||    
T  13490724 ctagagttttacaggccttaggcataatatgaaaaaag-ggccattacataatacattataaatttttttttgctcattgttgtgtgtttttttagctct 13490626  T
Q  247 tta 249  Q
    |||    
T  13490625 tta 13490623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 20891041 - 20891095
Alignment:
Q  299 tgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||| || | |||||||||||||| ||||||  |||||||    
T  20891041 tgaaaataaatcaaatactctacacacaccaaaacaaaataaaatattgtagaag 20891095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 8805935 - 8805986
Alignment:
Q  301 aaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||| |||||||| ||| | |||||||||||| |||||||||||||||    
T  8805935 aaaataaattaaatacttcata-ataccaaaacaaaataaaataccgtagaag 8805986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 26403118 - 26403062
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataata 202  Q
    ||||||||||||||||| ||||| | |||||||||||||| |  || ||||||||||    
T  26403118 ttcctagagttttacggatcttatgtataatatgataaaaaaatcctttatataata 26403062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 8113260 - 8113361
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||||| ||||||||| |||||||||| ||||   ||| ||| ||||||||||||||  ||| ||||||||||||||||||||||||| |||    
T  8113260 ttcctagagttttaggggtcttagacataatatgagaaaatgacccattacataatacgtcataaaatttgttagctcattgttgtgattttattaactc 8113359  T
Q  246 tt 247  Q
    ||    
T  8113360 tt 8113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 5771232 - 5771179
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  5771232 aggcaacatctgaaaataaaccaaatattttatagacaccaaaacaaaacaaaa 5771179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 8389051 - 8389140
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| ||||| | ||||||| ||||||| |||||||||||| ||||    
T  8389051 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttatctcattgttgtgttttt 8389140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 28459894 - 28459972
Alignment:
Q  163 gtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttatta 241  Q
    ||||||| |||||||| | |||||||| | ||||||||||||||||||  ||||||||||||| || ||||||||||||    
T  28459894 gtcttagacataatattagaaaagagctctttatataatacgtcataaatttttttagctcatcgtggtgattttatta 28459972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 20394692 - 20394753
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| |||||| ||||||||    
T  20394692 caacatctgaaaataaattaaatactttatgtacaccaaaacaaaataaaatatcgtagaag 20394753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 3123670 - 3123733
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaa 352  Q
    |||||| |||| | ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  3123670 aggcaatatctaacaataattcaaatactctatagacaccaaaacaaaataaaataccgtagaa 3123733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 31072280 - 31072369
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||| ||| |||||||||||||||| ||||| | |||||| ||||| | ||||||| ||||||||| |||||||||| ||||    
T  31072280 ttcctagagttttatgggccttaggcataatatgaaaaaag-ggcccttacataatgcatcataat-ttttttagcgcattgttgtgttttt 31072369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 3123519 - 3123621
Alignment:
Q  146 ttcctagagttttacgggtcttag-gcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagct 244  Q
    ||||||||||||||||||  |||  ||||||||||| ||||| || ||||| ||||||| ||||||| | |||||||| |||||| |  |||||||||||    
T  3123519 ttcctagagttttacgggctttaaagcataatatgagaaaagggctccttacataatacatcataatttgttttagcttattgttatctttttattagct 3123618  T
Q  245 ctt 247  Q
    |||    
T  3123619 ctt 3123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 4540059 - 4539997
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  4540059 caacatctgaaaataaattaaatattttatatacaccaaaacaaaataaaaataccgtagaag 4539997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 5771334 - 5771284
Alignment:
Q  197 ataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    |||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  5771334 ataatatgtcataaatttttttagctcattgttgtgattttattagctctt 5771284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 8389205 - 8389267
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||||  |||||||||||||||    
T  8389205 caacatctgaaaataaattaaatattttatacacaccaaaacaaaataaaaataccgtagaag 8389267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 357
Target Start/End: Original strand, 39038153 - 39038219
Alignment:
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    ||||||| |||||||| ||||||||||| | ||||| |||||||||| |||||||||||| ||||||    
T  39038153 gcaacatatgaaaatacatcaaatacttcacagacatcaaaacaaaataaaataccgtagtagagaa 39038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 6188982 - 6189039
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| ||||||||||||    
T  6188982 aggcaacatcttcaaataaatcaaatactctatagaaaccaaaactaaacaaaatacc 6189039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 6195498 - 6195555
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| ||||||||||||    
T  6195498 aggcaacatcttcaaataaatcaaatactctatagaaaccaaaactaaacaaaatacc 6195555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 21864059 - 21863995
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||| ||||||||| |||||||  ||| ||| |||||||||| |||||||||||||||    
T  21864059 aggcaacatctcaaaataaattaaatactccataaacaacaaaacaaaataaaataccgtagaag 21863995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 8113410 - 8113472
Alignment:
Q  290 ggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||| ||||||  |||||||    
T  8113410 ggcaacatctgaaaataaattaa-tactctatagacaccaaaacaaaataaaatattgtagaag 8113472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 20394549 - 20394641
Alignment:
Q  153 agttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    ||||||||||| |||| ||||||||| | ||||| | |||||| ||||||| ||||||   ||||||||||||||||||| |||| |||||||||    
T  20394549 agttttacgggccttatgcataatataaaaaaag-gtcccttacataatacatcataaatctttttagctcattgttgtg-tttttttagctctt 20394641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 14574285 - 14574232
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    ||||||||||| |||||||||||||||||  ||||| | |||||||||||||||    
T  14574285 aggcaacatcttaaaataaatcaaatactcaatagaaatcaaaacaaaacaaaa 14574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 15678520 - 15678565
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccc 191  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  15678520 ttcctagagttttacgggtcttaggcatagtatgaaaaaagggccc 15678565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 15995448 - 15995395
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||||||| ||||    
T  15995448 aggcaacatcttaaaataaatcaaatactcaatagaaaccaaaacaaaataaaa 15995395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 48637211 - 48637158
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaa 342  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| ||||||||    
T  48637211 aggcaacatcttcaaataaatcaaatactctatagaaaccaaaactaaacaaaa 48637158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 1623879 - 1623791
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||  |||||||||||||||| ||||| | || ||| ||||| | ||||||  |||||| ||||||||||||| ||||    
T  1623879 ttcctagagttttacggaccttaggcataatatgaaaaaag-ggcctttacataatgcatcataa--tttttttgctcattgttgtgttttt 1623791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 35477885 - 35477929
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||    
T  35477885 aacatctgaaaataaattaaatactatatatacaccaaaacaaaa 35477929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 39037999 - 39038102
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagcc--ccttatataatacgtcataatgttttttagctcattgttgtgattttattagc 243  Q
    ||||||||||||||| ||| |||||  ||||||||||||| |     ||||||||||||  ||||||  ||| |||| |||||||||||||||||||| |    
T  39037999 ttcctagagttttacaggttttaggtgtaatatgataaaaaaaaaaaccttatataatagatcataaaatttattagttcattgttgtgattttattacc 39038098  T
Q  244 tctt 247  Q
    ||||    
T  39038099 tctt 39038102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 44734116 - 44734081
Alignment:
Q  294 acatctgaaaataaatcaaatactttatagacacca 329  Q
    |||||||||||||||||||||| |||||||||||||    
T  44734116 acatctgaaaataaatcaaatattttatagacacca 44734081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 48238974 - 48238919
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||||||||||    
T  48238974 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaacaaaata 48238919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 9420877 - 9420815
Alignment:
Q  291 gcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||| ||||||| | | |||||||| ||| || |||||| ||||||||    
T  9420877 gcaacatctgaaaataaattaaatactctgttgacaccaacacataataaaatatcgtagaag 9420815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 31072430 - 31072492
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaa-caaaataccgtagaag 353  Q
    |||||||||||||||||| ||||| | |||| ||||| ||||||||  |||||||||||||||    
T  31072430 caacatctgaaaataaattaaatattctatatacaccgaaacaaaataaaaataccgtagaag 31072492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 8070098 - 8070041
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||  ||||| |||||||| ||| ||||||||    
T  8070098 aggcaacatcttcaaataaatcaaatactccatagaaaccaaaactaaataaaatacc 8070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 8604312 - 8604353
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaa 330  Q
    |||||||||||||||||||||||||| ||  |||||||||||    
T  8604312 aggcaacatctgaaaataaatcaaatgctccatagacaccaa 8604353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 9421028 - 9420928
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctc 245  Q
    |||||||||||| || || |||||| ||||||| | ||||  | | |||||||||||  ||||||| |||||||| | ||||||||| ||||||||| ||    
T  9421028 ttcctagagttt-actggccttaggtataatattagaaaatggtctcttatataatagatcataattttttttagtttattgttgtgtttttattagatc 9420930  T
Q  246 tt 247  Q
    ||    
T  9420929 tt 9420928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 12383138 - 12383093
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccc 191  Q
    |||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  12383138 ttcctagagttttacgggccttaggcatagtatgaaaaaagggccc 12383093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 24441568 - 24441629
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||| |||||||||||||||||||| ||||| ||||||| | || |||||| | ||||||    
T  24441568 caacatttgaaaataaatcaaatacttcatagaaaccaaaatagaataaaatatcatagaag 24441629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 135854 - 135802
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatac 345  Q
    |||||||  |||||||| |||||||  ||||| ||||||||||||||||||||    
T  135854 aacatcttcaaataaattaaatactccatagaaaccaaaacaaaacaaaatac 135802  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 13754311 - 13754267
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaa 337  Q
    ||||||| ||||||||| ||||||| |||| ||||||||||||||    
T  13754311 aacatctaaaaataaattaaatactctatatacaccaaaacaaaa 13754267  T

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Target: scaffold0116 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 292 - 357
Target Start/End: Complemental strand, 41168 - 41104
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaagagaa 357  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  41168 caacatctgaaa-taaatcaaatactttatagacaccaaaacaaaataaaatatcgtagaagagaa 41104  T

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Target: scaffold1364 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 1307 - 1243
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||||||||||||    
T  1307 aggcaacatctgaaaataaatcaaacacttcatagacatcaaaccaaaataaaataccgtagaag 1243  T

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Target: scaffold1364; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 244
Target Start/End: Complemental strand, 1447 - 1355
Alignment:
Q  153 agttttacgggtcttaggcataatatgataaaa-gagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagct 244  Q
    ||||||||||||||||  |||||||||| |||| |||| ||||||||||||| | ||||| |||||| ||||||||| ||| ||| |||||||    
T  1447 agttttacgggtcttaaacataatatgagaaaatgagctccttatataatacattataattttttttggctcattgtggtgctttaattagct 1355  T

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Target: scaffold1266 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 1773 - 1709
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||||||||||||    
T  1773 aggcaacatctgaaaataaatcaaacacttcatagacagcaaaccaaaataaaataccgtagaag 1709  T

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Target: scaffold1266; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 1897 - 1821
Alignment:
Q  172 ataatatgataaaa-gagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    ||||||||| |||| ||| || ||| || |||| ||||||| |||||| ||||||||| ||| ||||||||||||||    
T  1897 ataatatgagaaaatgagtcctttacattatacatcataattttttttcgctcattgtggtgcttttattagctctt 1821  T

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Target: scaffold0093 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 51195 - 51106
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgatttt 237  Q
    |||||||||||||||||| |||||||||||||||| ||||| | |||||| ||||| | ||||| | |||||||||||||||||||| ||||    
T  51195 ttcctagagttttacgggccttaggcataatatgaaaaaag-ggcccttacataatgcatcatagt-ttttttagctcattgttgtgttttt 51106  T

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Target: scaffold0385 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 1164 - 1113
Alignment:
Q  293 aacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaata 344  Q
    ||||| |||||||||||||||||||  |||||||||||||||||| ||||||    
T  1164 aacatatgaaaataaatcaaatactccatagacaccaaaacaaaataaaata 1113  T

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Target: scaffold0137 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 21086 - 21130
Alignment:
Q  292 caacatctgaaaataaatcaaatactttatagacaccaaaacaaa 336  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||    
T  21086 caacatttgaaaataaatcaaatactctattgacaccaaaacaaa 21130  T

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Target: scaffold0229 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 14493 - 14404
Alignment:
Q  156 tttacgggtcttaggcataatatgataaaagagccccttatataatacgtcataatgttttttagctcattgttgtgattttattagctctt 247  Q
    |||||||  ||||| |||||| ||| |||| | ||||||| ||||||| |  |||| |||||||||||||||||||| ||||||||||||||    
T  14493 tttacggaccttagacataatgtgagaaaaaa-ccccttacataatacattttaat-ttttttagctcattgttgtgtttttattagctctt 14404  T

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Target: scaffold0743 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 2387 - 2444
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaatacc 346  Q
    |||||||||||  ||||||||||||||||   |||| |||||||| ||||||||||||    
T  2387 aggcaacatcttcaaataaatcaaatactccgtagaaaccaaaactaaacaaaatacc 2444  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 4578 - 4618
Alignment:
Q  146 ttcctagagttttacgggtcttaggcataatatgataaaag 186  Q
    |||||||||||||||||| |||||||||| ||||| |||||    
T  4578 ttcctagagttttacgggccttaggcatagtatgaaaaaag 4618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 18245 - 18309
Alignment:
Q  289 aggcaacatctgaaaataaatcaaatactttatagacaccaaaacaaaacaaaataccgtagaag 353  Q
    |||||| |||| ||||||||||||| | || ||||||| |||| ||||| |||||||| ||||||    
T  18245 aggcaatatctaaaaataaatcaaacatttaatagacagcaaaccaaaataaaataccatagaag 18309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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