View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17797_low_40 (Length: 259)
Name: NF17797_low_40
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17797_low_40 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 31698825 - 31699054
Alignment:
| Q |
11 |
agaagaagtgtgaaataggattggatatggaaaccaatactcatttaacataacatacttaaatgcccagatgcaaccatcttgcaagacatttgcaccc |
110 |
Q |
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| T |
31698825 |
agaagaagtgtgaaataggattggatatggaaaccaatactcatttaacataacatccttaaatgcccagatgcaaccatcttgcaagacatttgcaccc |
31698924 |
T |
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| Q |
111 |
tttgtgattgtgtgataaaccaaaaaatacactccttggatctgaaatccattttaggctgattgtaaggcatcagaaatgaaaagcaagcatgtccgat |
210 |
Q |
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| T |
31698925 |
tttgtgattgtgtgataaacccaaaaatacactccttggatctgaaatccattttaggctgattgtaaggcatcagaaatgaaaagcaagcatgtccgat |
31699024 |
T |
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| Q |
211 |
gttcttaaatccttgttatgaggtatggta |
240 |
Q |
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| T |
31699025 |
gttcttaaatccttgttatgaggtagggta |
31699054 |
T |
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