View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17797_low_5 (Length: 566)

Name: NF17797_low_5
Description: NF17797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17797_low_5
NF17797_low_5
[»] chr5 (40 HSPs)
chr5 (1-195)||(22619202-22619395)
chr5 (336-507)||(22620010-22620181)
chr5 (483-541)||(21905848-21905906)
chr5 (266-312)||(24498582-24498628)
chr5 (400-473)||(24264987-24265060)
chr5 (400-473)||(24341618-24341691)
chr5 (408-477)||(25401848-25401917)
chr5 (266-321)||(11637580-11637635)
chr5 (408-479)||(20315029-20315100)
chr5 (374-477)||(24659561-24659664)
chr5 (265-315)||(9584596-9584646)
chr5 (381-471)||(16523114-16523204)
chr5 (381-471)||(19008097-19008187)
chr5 (397-463)||(34488140-34488206)
chr5 (266-315)||(689545-689594)
chr5 (411-471)||(23336066-23336126)
chr5 (266-321)||(3156532-3156587)
chr5 (381-471)||(18207784-18207874)
chr5 (266-321)||(18589875-18589930)
chr5 (266-321)||(20175825-20175880)
chr5 (267-314)||(22394034-22394081)
chr5 (266-321)||(22619872-22619927)
chr5 (266-321)||(23118059-23118114)
chr5 (266-317)||(26034620-26034671)
chr5 (266-317)||(29695013-29695064)
chr5 (266-321)||(40027772-40027827)
chr5 (266-308)||(13796328-13796370)
chr5 (266-308)||(17708072-17708114)
chr5 (483-537)||(25801366-25801420)
chr5 (266-307)||(14880410-14880451)
chr5 (266-307)||(22585650-22585691)
chr5 (213-242)||(22619417-22619446)
chr5 (408-477)||(24140930-24140999)
chr5 (266-307)||(29178445-29178486)
chr5 (265-321)||(10032282-10032338)
chr5 (268-308)||(10515361-10515401)
chr5 (266-314)||(17046332-17046380)
chr5 (381-477)||(20549252-20549348)
chr5 (381-477)||(20563664-20563760)
chr5 (278-322)||(29328719-29328763)
[»] chr8 (26 HSPs)
chr8 (381-477)||(13314505-13314601)
chr8 (264-321)||(1764962-1765019)
chr8 (266-321)||(26885646-26885701)
chr8 (265-319)||(3456831-3456885)
chr8 (263-312)||(1644690-1644739)
chr8 (267-318)||(5155574-5155625)
chr8 (400-483)||(25181968-25182051)
chr8 (266-321)||(26886050-26886105)
chr8 (266-321)||(28580942-28580997)
chr8 (266-308)||(13004163-13004205)
chr8 (267-321)||(30694447-30694501)
chr8 (266-312)||(31085881-31085927)
chr8 (266-308)||(39433408-39433450)
chr8 (267-312)||(11040436-11040480)
chr8 (266-315)||(12886055-12886104)
chr8 (266-311)||(13272540-13272585)
chr8 (266-307)||(18148824-18148865)
chr8 (408-477)||(23892746-23892815)
chr8 (381-466)||(24113876-24113961)
chr8 (267-312)||(36919310-36919355)
chr8 (266-311)||(40316854-40316899)
chr8 (265-321)||(3650517-3650573)
chr8 (267-319)||(10601762-10601814)
chr8 (266-314)||(15188897-15188945)
chr8 (273-321)||(24429804-24429852)
chr8 (265-321)||(26799181-26799237)
[»] chr4 (40 HSPs)
chr4 (380-471)||(22357049-22357140)
chr4 (483-541)||(9110361-9110419)
chr4 (381-488)||(17276045-17276152)
chr4 (386-479)||(17025889-17025982)
chr4 (386-465)||(24638986-24639064)
chr4 (266-312)||(6459941-6459987)
chr4 (266-312)||(32923247-32923293)
chr4 (263-308)||(34033328-34033373)
chr4 (483-519)||(7654049-7654085)
chr4 (266-318)||(9913897-9913949)
chr4 (267-319)||(30780128-30780180)
chr4 (266-318)||(43374283-43374335)
chr4 (506-541)||(7653999-7654034)
chr4 (408-471)||(17107110-17107173)
chr4 (266-321)||(35021475-35021530)
chr4 (266-321)||(35287515-35287570)
chr4 (266-321)||(39171378-39171433)
chr4 (265-308)||(40070989-40071032)
chr4 (266-297)||(56361846-56361877)
chr4 (381-471)||(23652221-23652311)
chr4 (266-312)||(38340337-38340383)
chr4 (268-318)||(42773052-42773102)
chr4 (266-312)||(50380853-50380899)
chr4 (266-315)||(2422694-2422743)
chr4 (266-323)||(2932121-2932178)
chr4 (381-466)||(4615200-4615285)
chr4 (381-466)||(5679697-5679782)
chr4 (266-315)||(12757310-12757359)
chr4 (266-307)||(32430145-32430186)
chr4 (268-317)||(47704582-47704631)
chr4 (384-476)||(8969243-8969335)
chr4 (408-460)||(11253303-11253355)
chr4 (266-310)||(23171009-23171053)
chr4 (266-314)||(23986449-23986497)
chr4 (267-307)||(31604315-31604355)
chr4 (270-318)||(39146644-39146692)
chr4 (265-301)||(44639996-44640032)
chr4 (265-321)||(49952577-49952633)
chr4 (266-318)||(51436617-51436669)
chr4 (268-312)||(52936641-52936685)
[»] chr7 (49 HSPs)
chr7 (482-537)||(11362004-11362059)
chr7 (482-541)||(40647210-40647269)
chr7 (486-538)||(45849595-45849647)
chr7 (381-471)||(15870088-15870178)
chr7 (385-471)||(4819339-4819425)
chr7 (400-464)||(1586474-1586538)
chr7 (411-471)||(9131422-9131482)
chr7 (396-471)||(4987013-4987088)
chr7 (396-471)||(4991111-4991186)
chr7 (266-321)||(26980944-26980999)
chr7 (266-321)||(29726798-29726853)
chr7 (408-466)||(1847834-1847892)
chr7 (381-471)||(2564311-2564401)
chr7 (483-537)||(21373733-21373787)
chr7 (266-308)||(27993050-27993092)
chr7 (385-466)||(4449429-4449510)
chr7 (400-473)||(9574903-9574976)
chr7 (265-321)||(1285077-1285133)
chr7 (268-311)||(2450580-2450623)
chr7 (381-476)||(11803492-11803587)
chr7 (269-312)||(15015242-15015285)
chr7 (408-471)||(17190754-17190817)
chr7 (265-312)||(21597677-21597724)
chr7 (408-471)||(22066785-22066848)
chr7 (400-466)||(1588042-1588108)
chr7 (266-312)||(4227545-4227591)
chr7 (262-296)||(19646494-19646528)
chr7 (266-308)||(21993180-21993222)
chr7 (266-308)||(23198770-23198812)
chr7 (266-312)||(24839486-24839532)
chr7 (267-321)||(34000261-34000315)
chr7 (269-307)||(36341087-36341125)
chr7 (266-308)||(36428146-36428188)
chr7 (266-308)||(46207758-46207800)
chr7 (266-308)||(47589574-47589616)
chr7 (266-312)||(48069854-48069900)
chr7 (385-466)||(2348448-2348529)
chr7 (267-308)||(13955479-13955520)
chr7 (270-315)||(15492302-15492347)
chr7 (273-318)||(23172405-23172450)
chr7 (268-312)||(34722037-34722082)
chr7 (266-323)||(39801704-39801761)
chr7 (268-321)||(43539112-43539165)
chr7 (266-311)||(44819511-44819556)
chr7 (266-318)||(4905274-4905326)
chr7 (385-477)||(10942000-10942092)
chr7 (266-321)||(19793802-19793858)
chr7 (266-321)||(38025126-38025182)
chr7 (268-312)||(38779980-38780024)
[»] chr1 (42 HSPs)
chr1 (381-476)||(22664652-22664747)
chr1 (381-463)||(24215013-24215095)
chr1 (381-483)||(9787468-9787570)
chr1 (382-473)||(18100529-18100620)
chr1 (265-307)||(7550893-7550935)
chr1 (400-466)||(51472768-51472833)
chr1 (266-307)||(41032929-41032970)
chr1 (400-476)||(24281784-24281860)
chr1 (266-314)||(43840340-43840388)
chr1 (266-321)||(2613720-2613775)
chr1 (268-318)||(23524824-23524874)
chr1 (267-321)||(32433103-32433157)
chr1 (408-477)||(21985537-21985606)
chr1 (263-312)||(23045186-23045235)
chr1 (272-312)||(5553018-5553058)
chr1 (268-312)||(11410627-11410671)
chr1 (268-308)||(15382840-15382880)
chr1 (266-318)||(51046140-51046192)
chr1 (268-319)||(17917148-17917199)
chr1 (266-309)||(26834518-26834561)
chr1 (269-308)||(52262187-52262226)
chr1 (266-312)||(3573341-3573387)
chr1 (483-537)||(9348622-9348676)
chr1 (381-471)||(21449570-21449660)
chr1 (266-312)||(29701337-29701383)
chr1 (266-312)||(45701326-45701372)
chr1 (265-315)||(50595897-50595947)
chr1 (268-297)||(4770660-4770689)
chr1 (420-477)||(9402127-9402184)
chr1 (267-312)||(10292935-10292980)
chr1 (263-308)||(10356204-10356249)
chr1 (408-477)||(14781400-14781469)
chr1 (266-307)||(27853353-27853394)
chr1 (266-315)||(41182620-41182669)
chr1 (385-477)||(727930-728022)
chr1 (268-312)||(10841900-10841944)
chr1 (266-318)||(13590108-13590160)
chr1 (386-466)||(17359577-17359657)
chr1 (268-308)||(28832192-28832232)
chr1 (263-311)||(30003196-30003244)
chr1 (268-308)||(32962563-32962603)
chr1 (266-318)||(48681944-48681996)
[»] chr6 (32 HSPs)
chr6 (381-471)||(1635455-1635545)
chr6 (483-537)||(4058995-4059049)
chr6 (483-541)||(7864071-7864129)
chr6 (265-321)||(25934806-25934862)
chr6 (268-319)||(9244119-9244170)
chr6 (381-483)||(6630196-6630298)
chr6 (266-321)||(2445297-2445352)
chr6 (381-476)||(11177425-11177520)
chr6 (483-537)||(11764201-11764255)
chr6 (266-308)||(13496114-13496156)
chr6 (266-307)||(14350947-14350988)
chr6 (266-321)||(9444955-9445010)
chr6 (267-318)||(12904328-12904379)
chr6 (266-308)||(2108723-2108765)
chr6 (267-321)||(6470624-6470678)
chr6 (266-312)||(16890465-16890511)
chr6 (439-477)||(20005450-20005488)
chr6 (483-537)||(20980157-20980211)
chr6 (269-311)||(24212557-24212599)
chr6 (266-308)||(28951397-28951439)
chr6 (266-315)||(9311944-9311993)
chr6 (410-471)||(9517239-9517300)
chr6 (267-312)||(12329275-12329320)
chr6 (266-303)||(18313931-18313968)
chr6 (268-321)||(24623325-24623378)
chr6 (266-319)||(33938689-33938742)
chr6 (266-318)||(5632132-5632184)
chr6 (265-321)||(8629704-8629760)
chr6 (266-322)||(20720788-20720844)
chr6 (381-477)||(23008941-23009037)
chr6 (381-477)||(23779327-23779423)
chr6 (274-314)||(26611055-26611095)
[»] chr3 (35 HSPs)
chr3 (483-541)||(20593067-20593125)
chr3 (385-468)||(2167220-2167303)
chr3 (381-471)||(21302409-21302499)
chr3 (385-477)||(19171374-19171466)
chr3 (266-321)||(28244112-28244167)
chr3 (266-321)||(39481139-39481194)
chr3 (483-537)||(45914040-45914094)
chr3 (268-312)||(1707765-1707809)
chr3 (385-477)||(16245239-16245331)
chr3 (398-466)||(17156297-17156365)
chr3 (265-321)||(18737105-18737161)
chr3 (270-314)||(44968179-44968223)
chr3 (266-321)||(14827523-14827578)
chr3 (266-321)||(15881088-15881143)
chr3 (482-537)||(49093875-49093930)
chr3 (267-317)||(2563928-2563978)
chr3 (266-308)||(5941315-5941357)
chr3 (266-312)||(7827506-7827552)
chr3 (266-312)||(7829894-7829940)
chr3 (266-308)||(8942015-8942057)
chr3 (266-308)||(20370302-20370344)
chr3 (267-321)||(22486682-22486736)
chr3 (423-477)||(41508990-41509044)
chr3 (269-311)||(47898028-47898070)
chr3 (266-312)||(49088750-49088796)
chr3 (266-308)||(51379800-51379842)
chr3 (274-315)||(4033426-4033467)
chr3 (408-465)||(8170344-8170401)
chr3 (266-303)||(36170116-36170153)
chr3 (408-464)||(12411596-12411652)
chr3 (267-311)||(22462311-22462355)
chr3 (266-310)||(23332648-23332692)
chr3 (266-321)||(25874128-25874184)
chr3 (263-303)||(36918898-36918938)
chr3 (273-321)||(38894042-38894090)
[»] scaffold0134 (1 HSPs)
scaffold0134 (381-466)||(11631-11716)
[»] chr2 (34 HSPs)
chr2 (381-477)||(12950566-12950662)
chr2 (385-477)||(15339737-15339829)
chr2 (266-314)||(17736791-17736839)
chr2 (381-477)||(29143374-29143470)
chr2 (408-471)||(18121805-18121868)
chr2 (397-476)||(25884974-25885053)
chr2 (266-309)||(35327354-35327397)
chr2 (483-537)||(19677734-19677788)
chr2 (265-321)||(9964488-9964544)
chr2 (381-477)||(17349841-17349937)
chr2 (266-317)||(3196558-3196609)
chr2 (266-321)||(13196698-13196753)
chr2 (271-318)||(19159944-19159991)
chr2 (266-321)||(24305313-24305368)
chr2 (385-436)||(25887453-25887504)
chr2 (268-314)||(15637598-15637644)
chr2 (397-451)||(20174176-20174230)
chr2 (382-476)||(28605684-28605778)
chr2 (266-312)||(29798534-29798580)
chr2 (266-308)||(42475131-42475173)
chr2 (267-312)||(12893261-12893306)
chr2 (397-471)||(23011278-23011356)
chr2 (411-464)||(29849849-29849902)
chr2 (420-477)||(31804327-31804384)
chr2 (265-314)||(39688253-39688302)
chr2 (266-314)||(10109661-10109709)
chr2 (269-321)||(16221354-16221406)
chr2 (381-477)||(17675210-17675306)
chr2 (266-302)||(19967416-19967452)
chr2 (268-308)||(27314867-27314907)
chr2 (431-471)||(27908706-27908746)
chr2 (381-477)||(30412089-30412185)
chr2 (265-317)||(33966318-33966370)
chr2 (268-308)||(37119279-37119319)
[»] scaffold0024 (1 HSPs)
scaffold0024 (381-483)||(40075-40177)
[»] scaffold0671 (1 HSPs)
scaffold0671 (381-477)||(900-996)
[»] scaffold0062 (2 HSPs)
scaffold0062 (381-466)||(42750-42835)
scaffold0062 (266-314)||(7472-7520)
[»] scaffold0756 (1 HSPs)
scaffold0756 (408-477)||(4539-4608)
[»] scaffold0021 (1 HSPs)
scaffold0021 (268-321)||(161141-161194)
[»] scaffold0008 (1 HSPs)
scaffold0008 (383-476)||(55353-55446)
[»] scaffold0016 (1 HSPs)
scaffold0016 (266-321)||(204588-204643)
[»] scaffold0011 (1 HSPs)
scaffold0011 (266-321)||(185261-185316)
[»] scaffold0012 (2 HSPs)
scaffold0012 (266-312)||(118817-118863)
scaffold0012 (268-312)||(177710-177754)
[»] scaffold0086 (1 HSPs)
scaffold0086 (265-314)||(19070-19119)
[»] scaffold0007 (1 HSPs)
scaffold0007 (265-321)||(244476-244533)
[»] scaffold0034 (1 HSPs)
scaffold0034 (381-477)||(76875-76971)


Alignment Details
Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 22619202 - 22619395
Alignment:
Q  1 tagcaatgttggagacaaagctgttgatgtcatcgttattgtttggtcattgcaattcaaagttattcagtttaatgtaatgtaaccacagaatgttgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22619202 tagcaatgttggagacaaagctgttgatgtcatcgttattgtttggtcattgcaattcaaagttattcagtgtaatgtaatgtaaccacagaatgttgat 22619301  T
Q  101 caaagtggaatgtcatttttgtaattctaacttaagttatggctaaattcggcaaaaaatgggttatatttaactgtgctttccaaataaaataa 195  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22619302 taaagtggaatgtcatttttgtaattctaacttaagttatggctaaattcggc-aaaaatgggttatatttaactgtgctttccaaataaaataa 22619395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 336 - 507
Target Start/End: Original strand, 22620010 - 22620181
Alignment:
Q  336 aaaaaggttcttataacaaacaaagcattctagtcgctcataagattaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggt 435  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22620010 aaaaaggttcttataacaagcaaatcattctagtcgctcaaaagtttaaattggctttctaagattttcaagggcaatgaaggtcaatgttcatgtaggt 22620109  T
Q  436 cggcccatctatgaatattaggacactcatatcacattctctttccccactagtacaaaaaacacttattaa 507  Q
    ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22620110 cggtccatctatgaatattaggacactcatatcacactctcttcccccactagtacaaaaaacacttattaa 22620181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 21905906 - 21905848
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccacatga 541  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  21905906 cactagtacaaaaaacacttattaaatctaggattttaaatgggatgctatccacatga 21905848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 24498582 - 24498628
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  24498582 tcgtgagcttaactcagttgatatgaataatgcataaaatatgtaag 24498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 24265060 - 24264987
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacatt 473  Q
    ||||||| ||||||||||| ||||||||  | |||||  ||||||||||||||||| |||||||||| ||||||    
T  24265060 tttccaaaggcaatgaaggccaatgttctcgaaggtcttcccatctatgaatattaagacactcatagcacatt 24264987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 24341691 - 24341618
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacatt 473  Q
    ||||||| ||||||||||| ||||||||  | |||||  ||||||||||||||||| |||||||||| ||||||    
T  24341691 tttccaaaggcaatgaaggccaatgttctcgaaggtcttcccatctatgaatattaagacactcatagcacatt 24341618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 25401917 - 25401848
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||| ||| | |||||||||||  ||||||||||||| |||||||||||||| |||| |||||    
T  25401917 ggcaatgaaggccaaggatcatgtaggtctacccatctatgaatcttaggacactcataacacactctct 25401848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 11637635 - 11637580
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||| |||| |||||| |||||||||| ||| ||||||||    
T  11637635 tcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggt 11637580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 479
Target Start/End: Complemental strand, 20315100 - 20315029
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctcttt 479  Q
    ||||||||||| ||||||||   |||||| ||||||||||||||  ||||||||||||| |||| |||||||    
T  20315100 ggcaatgaaggccaatgttcccttaggtctgcccatctatgaatcctaggacactcataacacactctcttt 20315029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 477
Target Start/End: Complemental strand, 24659664 - 24659561
Alignment:
Q  374 cataagattaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacatt 473  Q
    |||||| |||||||| |||||||   ||||| | ||||||||||| ||| ||||   |||||  |||||||||||||| |||||||||||||| |||| |    
T  24659664 cataagcttaaattgtctttctagtgtttcccaaggcaatgaaggacaaggttcccttaggtgtgcccatctatgaatcttaggacactcatagcacact 24659565  T
Q  474 ctct 477  Q
    ||||    
T  24659564 ctct 24659561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 9584596 - 9584646
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9584596 atcgtgagtttaactcagttgattggaacaatgcataaaatatgtaagatt 9584646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 471
Target Start/End: Complemental strand, 16523204 - 16523114
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||||| |  |||||| | ||||||||||| ||| ||||   |||||| ||| |||||||||| |||||||||||||| ||||    
T  16523204 ttaaattggctttccagtatttcccaaggcaatgaaggccaaggttcccttaggtctgcctatctatgaatcttaggacactcataacaca 16523114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 471
Target Start/End: Complemental strand, 19008187 - 19008097
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||||||    ||||| | ||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||||||| ||||    
T  19008187 ttaaattggctttctggtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagcaca 19008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 34488140 - 34488206
Alignment:
Q  397 agatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactc 463  Q
    |||||||||| | ||||||||| |||||||| || |||||  ||||||||||||| |||||||||||    
T  34488140 agatttccaaagacaatgaaggccaatgttcctgaaggtcttcccatctatgaatcttaggacactc 34488206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 689545 - 689594
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||||| |||||||||||||||||| |||||| |||| ||||||||||||    
T  689545 tcgtgaacttaactcagttgatatggacaatgtataatatatgtaagatt 689594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 23336066 - 23336126
Alignment:
Q  411 aatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||| ||||||||  ||||||| | |||||||||||| |||||||||| ||||||||    
T  23336066 aatgaaggccaatgttccagtaggtctggccatctatgaatcttaggacactaatatcaca 23336126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 3156532 - 3156587
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||| |||||||||||| |||| | |||| ||||||||||||||||| |||||    
T  3156532 tcgtgagtttaactcagttggtatggataatgcataaaatatgtaagatttggggt 3156587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 471
Target Start/End: Complemental strand, 18207874 - 18207784
Alignment:
Q  381 ttaaattggc-tttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||| |||||| ||||||||| ||||||||||| ||||||||  | ||||   ||| ||||||||| |||||||||||||| ||||    
T  18207874 ttaaattggcatttcta-gatttccaaaggcaatgaaggccaatgttcccgaaggttttcccgtctatgaatcttaggacactcatagcaca 18207784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 18589930 - 18589875
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||| ||||||||||| |||| ||||| ||| | ||||||    
T  18589930 tcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccggggt 18589875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 20175825 - 20175880
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||| ||   |||||| |||||||||| ||||||||||||    
T  20175825 tcgtgagcttaactcagttgttagagacaatgcataaaatatgcaagattcggggt 20175880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 22394034 - 22394081
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    |||||||||| ||||||||||||| |||||| |||| |||||||||||    
T  22394034 cgtgagcttagctcagttgatatggacaatgcataatatatgtaagat 22394081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 22619872 - 22619927
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| ||||||||||| |||||||||  ||||| ||||||    
T  22619872 tcgtgagcttagctcagttggtatgaacaatgcataaaatatacaagatccggggt 22619927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 23118114 - 23118059
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||||||| | |||||| |||| ||||||||| || |||||    
T  23118114 tcgtgagcttaactcagttgataaggacaatgcataatatatgtaaggtttggggt 23118059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 26034671 - 26034620
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcg 317  Q
    |||||||||||||||||||| ||||||||||| |||| ||||| ||| ||||    
T  26034671 tcgtgagcttaactcagttggtatgaacaatgcataatatatgaaaggttcg 26034620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 29695013 - 29695064
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcg 317  Q
    |||||| |||||||||||||||||| |||||| |||| ||||||||| ||||    
T  29695013 tcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggttcg 29695064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 40027827 - 40027772
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||||  ||| |||||| |||| |||||||| |||||||||    
T  40027827 tcgtgagcttaactcagttggcatggacaatgcataatatatgtaaaattcggggt 40027772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 13796328 - 13796370
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||| ||||||||||||| |||| |||||    
T  13796328 tcgtgagcttaactcagtcgatatgaacaatgcataatatatg 13796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 17708072 - 17708114
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||| |||||||||||||||| |||||| ||||||||||    
T  17708072 tcgtgagcataactcagttgatatggacaatgcataaaatatg 17708114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 537
Target Start/End: Original strand, 25801366 - 25801420
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    |||||||||||||||||||| |||| || |  ||||||||||||||| |||||||    
T  25801366 cactagtacaaaaaacactttttaattcaaacattttaaatgggttgctatccac 25801420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 14880410 - 14880451
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    |||||||||||||||||||| ||||||||||| | |||||||    
T  14880410 tcgtgagcttaactcagttggtatgaacaatgcagaaaatat 14880451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 22585650 - 22585691
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    ||||| |||||||||||||||||||||||||| |||| ||||    
T  22585650 tcgtgggcttaactcagttgatatgaacaatgcataatatat 22585691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 22619417 - 22619446
Alignment:
Q  213 tttgaagaaactaaaatggttatattgaat 242  Q
    ||||||||||||||||||||||||||||||    
T  22619417 tttgaagaaactaaaatggttatattgaat 22619446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 24140930 - 24140999
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||| ||||||||   || ||| |||||| ||||||| |||||||||||||| |||| |||||    
T  24140930 ggcaatgaaggccaatgttcccttaagtctgcccatatatgaatcttaggacactcataacacactctct 24140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 29178445 - 29178486
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  29178445 tcgtgagcttaactcagttggtatggacaatgcataaaatat 29178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 10032338 - 10032282
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||||| |||| |||||| |||| ||||| ||| || |||||    
T  10032338 atcgtgagcttaactcagttggtatggacaatgcataacatatgcaaggtttggggt 10032282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 10515361 - 10515401
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||| |||||||||| ||||||||||| |||||    
T  10515361 gtgagcttaacttagttgatatggacaatgaataatatatg 10515401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 17046332 - 17046380
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    |||||||||||||||||||| |||| |||||| |||| ||||| |||||    
T  17046332 tcgtgagcttaactcagttggtatggacaatgcataatatatgcaagat 17046380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 20549348 - 20549252
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||| ||||||   ||||| | | ||||||||| ||| ||||   ||||||  ||||||||||||| |||||||||||||| |||| |||||    
T  20549348 ttaaattggatttctagtgtttcccaagacaatgaaggccaaggttcccttaggtcttcccatctatgaatcttaggacactcatagcacactctct 20549252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 20563760 - 20563664
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||| |   ||||| | ||||||||||| ||||||||   |||||  |||||||| ||||| |||||||| ||||| |||| |||||    
T  20563760 ttaaattggctttccagtgtttcccaaggcaatgaaggccaatgttcccttaggttcgcccatctttgaatcttaggacagtcatagcacactctct 20563664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 29328719 - 29328763
Alignment:
Q  278 ctcagttgatatgaacaatgaataaaatatgtaagattcggggta 322  Q
    ||||||||||| | |||||| |||||||||||||| |||||||||    
T  29328719 ctcagttgatacggacaatgcataaaatatgtaaggttcggggta 29328763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 13314601 - 13314505
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||||||||||||| |||||||||||||| || |||| |||||||  ||| |||||||||| |||||||||||||| |||| |||||    
T  13314601 ttaaattggctttctaagatttcctagggcaatgaaggttaaggttcctgtaggtttgcctatctatgaatcttaggacactcatagcacactctct 13314505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 1765019 - 1764962
Alignment:
Q  264 tatcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||||| ||||||    
T  1765019 tatcgtgagcttaactcagttgatatgaacaacgcataaaatatgcaagatccggggt 1764962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 26885701 - 26885646
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||| ||| |||||||| ||||||||||| |||||||||||||||| ||||||    
T  26885701 tcgtgagtttagctcagttggtatgaacaatgcataaaatatgtaagatccggggt 26885646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 3456885 - 3456831
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggg 319  Q
    ||||||| ||||||||| ||||||||||||||| |||| ||||||||| ||||||    
T  3456885 atcgtgaacttaactcaattgatatgaacaatgcataatatatgtaaggttcggg 3456831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 1644739 - 1644690
Alignment:
Q  263 ttatcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  1644739 ttatcgtgagcttagctcagttggtatgagcaatgcataaaatatgtaag 1644690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 5155625 - 5155574
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||| |||||||||||||||| |||||||| |||||||||| ||| |||||    
T  5155625 cgtgaacttaactcagttgataagaacaatgcataaaatatgcaaggttcgg 5155574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 483
Target Start/End: Complemental strand, 25182051 - 25181968
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctctttcccc 483  Q
    ||||||| | ||||||||| ||||||||   |||||| | |||||||||||| |||||||||| ||| |||| |||| ||||||    
T  25182051 tttccaaagacaatgaaggccaatgttccattaggtcagtccatctatgaatcttaggacactaataacacactctccttcccc 25181968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 26886105 - 26886050
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||| |||||| ||||| |||| |||||| |||||||||||||||| ||||||    
T  26886105 tcgtgagtttaacttagttggtatggacaatgcataaaatatgtaagatccggggt 26886050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 28580942 - 28580997
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||  |||||||| |||||| |||| |||||||||||||| ||||||||    
T  28580942 tcgtgagcttggctcagttggtatgaataatgcataaaatatgtaaggttcggggt 28580997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 13004163 - 13004205
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| |||| |||||| ||||||||||    
T  13004163 tcgtgagcttaactcagttggtatggacaatgcataaaatatg 13004205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 30694501 - 30694447
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||| |||||||  ||||||||||| |||||||||| ||| ||||||||    
T  30694501 cgtgagcttatctcagtttgtatgaacaatgcataaaatatgcaaggttcggggt 30694447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 31085927 - 31085881
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||| |||||||||||||||||||| ||||  ||||||||    
T  31085927 tcgtgagcttagctcagttgatatgaacaatgtataatgtatgtaag 31085881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 39433408 - 39433450
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||| |||||||||||||||||||  ||||||||||    
T  39433408 tcgtgagcttagctcagttgatatgaacaatacataaaatatg 39433450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 11040480 - 11040436
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||    
T  11040480 cgtgagcttaactcagttgat-tggacaatgcataaaatatgtaag 11040436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 12886055 - 12886104
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||||||||||||||||||  || |||||||| |||| ||||||||||||    
T  12886055 tcgtgagcttaactcagttactaggaacaatgcataatatatgtaagatt 12886104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 13272585 - 13272540
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    |||||| |||||||||||||||||| |||||| |||| ||||||||    
T  13272585 tcgtgaacttaactcagttgatatggacaatgcataatatatgtaa 13272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 18148865 - 18148824
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    ||||||||||||||||||| |||||||||||| |||| ||||    
T  18148865 tcgtgagcttaactcagttaatatgaacaatgcataatatat 18148824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 23892815 - 23892746
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||| ||| ||||   |||||  |||||||||||||| |||||||||||||| |||| |||||    
T  23892815 ggcaatgaaggccaaggttcccttaggtatgcccatctatgaatcttaggacactcatagcacactctct 23892746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 24113961 - 24113876
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    |||||||||| ||| ||  ||||| | ||||||||||||||||||||   || ||| | |||||||||||  ||||||||||||||    
T  24113961 ttaaattggcgttccaatttttcccaaggcaatgaaggtcaatgttccaataagtcagtccatctatgaagcttaggacactcata 24113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 36919310 - 36919355
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||||||||||| || |||||||| |||| |||||||||    
T  36919310 cgtgagcttaactcagttggtaagaacaatgtataatatatgtaag 36919355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 40316854 - 40316899
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    ||||||||||| ||||||||||||||| |||| |||| ||||||||    
T  40316854 tcgtgagcttatctcagttgatatgaataatgcataatatatgtaa 40316899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 3650517 - 3650573
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||||| ||  || |||| |||| ||||||||| ||||||||    
T  3650517 atcgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggt 3650573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 10601762 - 10601814
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggg 319  Q
    ||||||||||| ||||||| |||| |||||| |||| ||||| ||||||||||    
T  10601762 cgtgagcttaattcagttggtatggacaatgcataatatatgcaagattcggg 10601814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 15188897 - 15188945
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    |||||||||||||||||||  |||| |||||| |||| |||||||||||    
T  15188897 tcgtgagcttaactcagttagtatggacaatgcataatatatgtaagat 15188945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 24429804 - 24429852
Alignment:
Q  273 cttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||| |||| |||||||| |||||| |||||||||||||| ||||||||    
T  24429804 cttagctcacttgatatggacaatgcataaaatatgtaaggttcggggt 24429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 26799181 - 26799237
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||| ||||||||||||||| || | |||||| |||||||||| ||| ||||||||    
T  26799181 atcgtaagcttaactcagttggtagggacaatgcataaaatatgcaaggttcggggt 26799237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 471
Target Start/End: Complemental strand, 22357140 - 22357049
Alignment:
Q  380 attaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||||| ||| |||||||||||   |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| ||||    
T  22357140 attaaattggcgttccaagatttccaaaaccaatgaaggtcaatgttcttgtaggtcggcccatctatgaatcttgggacactcatagcaca 22357049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 9110419 - 9110361
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccacatga 541  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  9110419 cactagtacaaaatacacttattaaatcaaggattttaaatgggttgctatccacatga 9110361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 488
Target Start/End: Original strand, 17276045 - 17276152
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctctttc 480  Q
    |||||||||||||| ||||| ||| | || |||||||| |||||||  |||||||| | ||||||||  || ||| |||||||||| |||| |||| |||    
T  17276045 ttaaattggctttccaagatatccgaaggtaatgaaggccaatgtttttgtaggtctgaccatctatatatcttaagacactcatagcacactctccttc 17276144  T
Q  481 cccactag 488  Q
    ||||||||    
T  17276145 cccactag 17276152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 479
Target Start/End: Complemental strand, 17025982 - 17025889
Alignment:
Q  386 ttggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctcttt 479  Q
    |||||||||||   ||||| | ||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||||||| |||| |||||||    
T  17025982 ttggctttctagtgtttcccaaggcaatgaaggccaaggttctcttaggtctgcccatctatgaatcttaggacactcatagcacactctcttt 17025889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 24639064 - 24638986
Alignment:
Q  386 ttggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcat 465  Q
    ||||||||| |  |||||| | ||||||||||||||| |||| | ||||||  |||||||||||||||||||||||||||    
T  24639064 ttggctttccaccatttcccaaggcaatgaaggtcaaggttcct-taggtctacccatctatgaatattaggacactcat 24638986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 6459987 - 6459941
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||    
T  6459987 tcgtgagcttaactcagttgatatggacaatgcataatatatgtaag 6459941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 32923293 - 32923247
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| ||||||||||| |||| |||||||||    
T  32923293 tcgtgagcttaactcagttggtatgaacaatgcataatatatgtaag 32923247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 34033328 - 34033373
Alignment:
Q  263 ttatcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  34033328 ttatcgtgagcttaactcagttgataagaaccatgcataaaatatg 34033373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 519
Target Start/End: Complemental strand, 7654085 - 7654049
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggatttt 519  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7654085 cactagtacaaaaaatacttattaaatctaggatttt 7654049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 9913897 - 9913949
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||| |||||||| ||||||||||| |||||||||  |||||||||    
T  9913897 tcgtgagcttagctcagttggtatgaacaatgcataaaatatacaagattcgg 9913949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 30780128 - 30780180
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggg 319  Q
    ||||||||||||||||||| |||| |||||| ||||||||| |||| ||||||    
T  30780128 cgtgagcttaactcagttggtatggacaatgcataaaatatataaggttcggg 30780180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 43374335 - 43374283
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||| ||||||||||||| |||||| |||||||||| ||| |||||    
T  43374335 tcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcgg 43374283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 541
Target Start/End: Complemental strand, 7654034 - 7653999
Alignment:
Q  506 aaatctaggattttaaatgggttgttatccacatga 541  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7654034 aaatctaggattttaaatgggttgttatccaaatga 7653999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 17107110 - 17107173
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||||  ||||||||  ||||||| ||||||||| ||||||||||||| ||||| ||||    
T  17107110 ggcaatgaagaccaatgttccagtaggtcagcccatctacgaatattaggacattcatagcaca 17107173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 35021530 - 35021475
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| ||||||||||||| |||||  |||||||||| ||| ||||||||    
T  35021530 tcgtgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggggt 35021475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 35287570 - 35287515
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| ||||||||||| |||||||||| ||| | ||||||    
T  35287570 tcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggt 35287515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 39171433 - 39171378
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| ||||||||||||| |||||| |||||||||| ||| ||| ||||    
T  39171433 tcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcagggt 39171378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 40071032 - 40070989
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||    
T  40071032 atcgtgagcttaactcagttggtatgaacaatgcataatatatg 40070989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 297
Target Start/End: Complemental strand, 56361877 - 56361846
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatg 297  Q
    ||||||||||||||||||||||||||||||||    
T  56361877 tcgtgagcttaactcagttgatatgaacaatg 56361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 23652221 - 23652311
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||||| |||| |||| | | | ||||||||||| |||| ||||||||  |||||| |||||| ||| || ||||||| ||||    
T  23652221 ttaaattggctttcaaagaattcccaagtctatgaaggtcaaggttcttgtaggtcaacccatcaatgaatcttatgatactcataacaca 23652311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 38340383 - 38340337
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| |||| |||||  ||||||||||||||    
T  38340383 tcgtgagcttaactcagttggtatggacaatacataaaatatgtaag 38340337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 42773052 - 42773102
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    |||||| |||||||||||||||| |||||  |||||||||||||| |||||    
T  42773052 gtgagcataactcagttgatatggacaatacataaaatatgtaaggttcgg 42773102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 50380899 - 50380853
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||||||    
T  50380899 tcgtgagcttaattcagttggtatgaacaatgcataatatatgtaag 50380853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 2422743 - 2422694
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||| |||||||||||||||||||| |||||  |||| ||||||||||||    
T  2422743 tcgtaagcttaactcagttgatatggacaatatataatatatgtaagatt 2422694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 2932121 - 2932178
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggtac 323  Q
    ||||||||||| ||| ||||||| | |||||| |||| ||||||||||||| ||||||    
T  2932121 tcgtgagcttagctctgttgatagggacaatgcataatatatgtaagattcagggtac 2932178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 4615200 - 4615285
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    |||||||||||||| |   ||||| | ||||| ||||||||| ||||   |||||| |||||||||| ||| ||||||||||||||    
T  4615200 ttaaattggctttccagtgtttcccaaggcaaggaaggtcaaggttcccttaggtctgcccatctataaatcttaggacactcata 4615285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 5679697 - 5679782
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    |||||||||| |||  || ||||||| |||||| |||| || |||||  | |||||  ||||||||||||| ||||||||||||||    
T  5679697 ttaaattggcgttcctaggtttccaaaggcaataaaggccagtgttcccgaaggtcttcccatctatgaatcttaggacactcata 5679782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 12757359 - 12757310
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    ||||||||||||||||||| ||  | |||||| |||||||||||||||||    
T  12757359 tcgtgagcttaactcagttcattaggacaatgcataaaatatgtaagatt 12757310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 32430186 - 32430145
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    |||||||||||||||||||  ||||||||||| |||||||||    
T  32430186 tcgtgagcttaactcagttagtatgaacaatgcataaaatat 32430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 47704582 - 47704631
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcg 317  Q
    |||||||||||||||||| |||||| |||| |||| ||||||||| ||||    
T  47704582 gtgagcttaactcagttggtatgaataatgtataatatatgtaaggttcg 47704631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 476
Target Start/End: Complemental strand, 8969335 - 8969243
Alignment:
Q  384 aattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    ||||||| |||  ||||||| || ||||||||||  |||| ||| || || ||  ||||||| ||||| |||||||||||||| |||||||||    
T  8969335 aattggcgttcctagatttctaaaggcaatgaagaccaattttcttgaagatcttcccatctgtgaatcttaggacactcatagcacattctc 8969243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 460
Target Start/End: Complemental strand, 11253355 - 11253303
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggaca 460  Q
    ||||||||||| ||| |||| |||||||| |||||| ||||||| ||||||||    
T  11253355 ggcaatgaaggccaaggttcctgtaggtctgcccatatatgaatcttaggaca 11253303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 23171009 - 23171053
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgta 310  Q
    |||||||||||||||||||| || |||||||| |||| |||||||    
T  23171009 tcgtgagcttaactcagttgttaggaacaatgtataatatatgta 23171053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 23986497 - 23986449
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||||||||||||||||||||  || |||||||| ||||| |||||    
T  23986497 tcgtgagcttaactcagttgatatagacgatgaataatatatgcaagat 23986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 31604355 - 31604315
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    ||||||||||||||||||| || |||||||| |||||||||    
T  31604355 cgtgagcttaactcagttggtaagaacaatgcataaaatat 31604315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 39146644 - 39146692
Alignment:
Q  270 gagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||||||||||||| |||||| |||| ||| ||||| |||||    
T  39146644 gagcttaactcagttgatatggacaatgcataatataagtaaggttcgg 39146692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 44640032 - 44639996
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaata 301  Q
    |||||||||||||||||||||||| | ||||||||||    
T  44640032 atcgtgagcttaactcagttgatagggacaatgaata 44639996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 49952633 - 49952577
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||| ||||| || |||||| |||| ||||||||| | ||||||    
T  49952633 atcgtgagcttaactcaattgatttggacaatgcataatatatgtaaggtccggggt 49952577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 51436669 - 51436617
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    |||||| |||||||||||||||| |||||||| |||| ||||| ||| |||||    
T  51436669 tcgtgaacttaactcagttgatacgaacaatgcataatatatgcaaggttcgg 51436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 52936641 - 52936685
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||||  ||||||| |||| |||||||||    
T  52936641 gtgagcttaactcagttgatagaaacaatgtataatatatgtaag 52936685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 482 - 537
Target Start/End: Original strand, 11362004 - 11362059
Alignment:
Q  482 ccactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11362004 ccactagtacaaaaaacacttattacatctaggattttaaatgggttgttatccac 11362059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 482 - 541
Target Start/End: Complemental strand, 40647269 - 40647210
Alignment:
Q  482 ccactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccacatga 541  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  40647269 ccactagtacaaaaaacacttattaaatctaggattttaaatgagttgctatccacatga 40647210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 486 - 538
Target Start/End: Original strand, 45849595 - 45849647
Alignment:
Q  486 tagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccaca 538  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45849595 tagtacaaaaaacacttattaaatctaggattttaaatgggttgctatccaca 45849647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 15870088 - 15870178
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||  ||| ||||||||||| |||||| ||||| ||| ||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  15870088 ttaaattggagttccaagatttccaatggcaatcaaggtaaatcttcctgtaggtcggcccatttttgaatattaggacactcatagcaca 15870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 4819339 - 4819425
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||| | ||||||| | | ||||||||| ||| |||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  4819339 attggctttccacgatttcctaagacaatgaaggccaaggttcttgtaggtctacccatctatgaatcttaggacaatcatatcaca 4819425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 1586474 - 1586538
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactca 464  Q
    ||||||||||||||||||| |||||||| || |||||  ||||||||| ||||||| ||||||||    
T  1586474 tttccaagggcaatgaaggccaatgttcttgaaggtcttcccatctataaatattatgacactca 1586538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 9131422 - 9131482
Alignment:
Q  411 aatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||||||||||| ||||||||  ||||||||| ||| |||||||||||||| ||||    
T  9131422 aatgaaggtcaatgttcctgtaggtctacccatctataaatcttaggacactcatagcaca 9131482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 471
Target Start/End: Original strand, 4987013 - 4987088
Alignment:
Q  396 aagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||  | |||||||||||||| || ||| || ||||||||||| |||| |||||||||||||| ||||    
T  4987013 aagatttccaaaagtaatgaaggtcaatgctcctgttggccggcccatctacgaatcttaggacactcataacaca 4987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 471
Target Start/End: Original strand, 4991111 - 4991186
Alignment:
Q  396 aagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||  | |||||||||||||| || ||| || ||||||||||| |||| |||||||||||||| ||||    
T  4991111 aagatttccaaaagtaatgaaggtcaatgctcctgttggccggcccatctacgaatcttaggacactcataacaca 4991186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 26980999 - 26980944
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||| | ||||||    
T  26980999 tcgtgagcttaactcagttgatatgaacaatgtatattatatgtaaggtccggggt 26980944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 29726798 - 29726853
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||| ||||||||    
T  29726798 tcgtgagcttaactcagttgacatgaacaatgtataatatatgcaaggttcggggt 29726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 1847892 - 1847834
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    ||||||||||| ||| ||||   ||| ||||||||||||||||||||||||||||||||    
T  1847892 ggcaatgaaggccaaggttccattagatcggcccatctatgaatattaggacactcata 1847834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 2564311 - 2564401
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||||| ||||||||| | ||||||||| | ||  |||| |||||||   || |||||||||| |||||||||||||| ||||    
T  2564311 ttaaattggctttccaagatttcctaaggcaatgaaagccatggttcctgtaggttttccgatctatgaatgttaggacactcataacaca 2564401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 537
Target Start/End: Complemental strand, 21373787 - 21373733
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||| ||||||||||||||||| || ||| |||||| |||||||||||||||    
T  21373787 cactagtgcaaaaaacacttattaagtcaaggtttttaagtgggttgttatccac 21373733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 27993092 - 27993050
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  27993092 tcgtgagcttaactcagttggtatgaacaatgcataaaatatg 27993050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 4449429 - 4449510
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    ||||||||||||   ||||| | ||||||||||| ||| ||||   |||||| |||||||||||||| ||||||||||||||    
T  4449429 attggctttctagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcata 4449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 473
Target Start/End: Original strand, 9574903 - 9574976
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacatt 473  Q
    ||||||| ||||||||||| ||||||||  | |||||  ||||||||||||| |||||||||| ||| ||||||    
T  9574903 tttccaaaggcaatgaaggccaatgttctcgaaggtcttcccatctatgaatcttaggacacttataacacatt 9574976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 1285133 - 1285077
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||| ||||||||||||||| |||||||| |||| ||||| ||||| ||||||    
T  1285133 atcgtgagtttaactcagttgataggaacaatgcataatatatgcaagatccggggt 1285077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 311
Target Start/End: Original strand, 2450580 - 2450623
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    |||||||||||||||||| ||||||||||  |||||||||||||    
T  2450580 gtgagcttaactcagttggtatgaacaatacataaaatatgtaa 2450623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 11803492 - 11803587
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    |||||||||||||| |   ||||| | ||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||| ||| |||| ||||    
T  11803492 ttaaattggctttccagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactaatagcacactctc 11803587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 312
Target Start/End: Original strand, 15015242 - 15015285
Alignment:
Q  269 tgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| |||||||| |||| |||||||||    
T  15015242 tgagcttaactcagttgataagaacaatgcataatatatgtaag 15015285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 471
Target Start/End: Complemental strand, 17190817 - 17190754
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||||||||| ||||   |||||| |||||||||||||| ||| |||||||||| ||||    
T  17190817 ggcaatgaaggtcaaggttcccttaggtctgcccatctatgaatcttatgacactcatagcaca 17190754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 21597677 - 21597724
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||| ||||||||||||| |||||| |||| |||||||||    
T  21597677 atcgtgagcttatctcagttgatatggacaatgcataatatatgtaag 21597724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 471
Target Start/End: Complemental strand, 22066848 - 22066785
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||||||| ||||    
T  22066848 ggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagcaca 22066785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 1588042 - 1588108
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    ||||||| ||||||||||  || ||||| |  |||||  ||||||||||||||||||||||||||||    
T  1588042 tttccaatggcaatgaagtccagtgttcctaaaggtcttcccatctatgaatattaggacactcata 1588108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 4227591 - 4227545
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| |||| |||||| |||||| |||||||    
T  4227591 tcgtgagcttaactcagttggtatggacaatgcataaaacatgtaag 4227545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 296
Target Start/End: Original strand, 19646494 - 19646528
Alignment:
Q  262 attatcgtgagcttaactcagttgatatgaacaat 296  Q
    |||||||||||||||||||||||||||||| ||||    
T  19646494 attatcgtgagcttaactcagttgatatgatcaat 19646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 21993180 - 21993222
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| |||| |||||| ||||||||||    
T  21993180 tcgtgagcttaactcagttggtatggacaatgcataaaatatg 21993222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 23198812 - 23198770
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||    
T  23198812 tcgtgagtttaactcagttggtatgaacaatgcataaaatatg 23198770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 24839486 - 24839532
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| |||  |||||| ||||||||||||||    
T  24839486 tcgtgagcttaactcagttggtatagacaatgcataaaatatgtaag 24839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 34000261 - 34000315
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||||| | | |||| |||| ||||||||| ||||||||    
T  34000261 cgtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggt 34000315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 36341125 - 36341087
Alignment:
Q  269 tgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  36341125 tgagcttaactcagttggtatgaacaatgcataaaatat 36341087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 36428146 - 36428188
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| |||| |||||| ||||||||||    
T  36428146 tcgtgagcttaactcagttggtatggacaatgtataaaatatg 36428188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 46207758 - 46207800
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||    
T  46207758 tcgtgagcttagctcagttggtatgaacaatgcataaaatatg 46207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 47589616 - 47589574
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||    
T  47589616 tcgtgagcttagctcagttggtatgaacaatgcataaaatatg 47589574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 48069900 - 48069854
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||| ||||||||| |||||||||| |||| |||||||||    
T  48069900 tcgtgagcttagctcagttgacatgaacaatgcataatatatgtaag 48069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 2348529 - 2348448
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    |||||||||| || |||||| | ||||||||||| ||| |||| | |||||   | ||||||||||| ||||||||||||||    
T  2348529 attggctttccaatatttcccaaggcaatgaaggccaaggttcctataggtttactcatctatgaatcttaggacactcata 2348448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 13955479 - 13955520
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||| |||||||| ||||||||||| ||||||||||    
T  13955479 cgtgagcttagctcagttggtatgaacaatgcataaaatatg 13955520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 15492347 - 15492302
Alignment:
Q  270 gagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||||    
T  15492347 gagcttagctcagttgatatggacaatgtataaaatatgcaagatt 15492302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 23172405 - 23172450
Alignment:
Q  273 cttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||||| || |||||||| |||| |||||||||||||||    
T  23172405 cttaactcagttggtaggaacaatgtataatatatgtaagattcgg 23172450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 34722082 - 34722037
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataa-aatatgtaag 312  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||    
T  34722082 gtgagcttaactcagttggtatgaacaatgcataataatatgtaag 34722037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 39801704 - 39801761
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggtac 323  Q
    ||||||||||| |||||||| |||| |||||| |||| ||||| ||||| ||||||||    
T  39801704 tcgtgagcttagctcagttggtatggacaatgcataatatatgcaagatccggggtac 39801761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 43539165 - 43539112
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||| ||||||||||| |||||||| |||| ||||||||| | ||||||    
T  43539165 gtgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggt 43539112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 44819556 - 44819511
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    ||||||||||| ||||||||||  |||||||| |||||||||||||    
T  44819556 tcgtgagcttagctcagttgattagaacaatgcataaaatatgtaa 44819511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 4905274 - 4905326
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    |||||||||||||||||||| | || |||||| |||||||||| ||| |||||    
T  4905274 tcgtgagcttaactcagttgttgtggacaatgcataaaatatgcaaggttcgg 4905326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 477
Target Start/End: Complemental strand, 10942092 - 10942000
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||| |||| ||||||||| | ||||||||||| ||| |||| |||| |||   |||||||| ||| | |||||||||||| |||| |||||    
T  10942092 attgggtttccaagatttcccaaggcaatgaaggccaaggttcctgtatgtctagccatctattaatctcaggacactcataacacactctct 10942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 19793802 - 19793858
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaat-aaaatatgtaagattcggggt 321  Q
    ||||||| ||||||||||||||||| |||||| || | |||||| ||||||||||||    
T  19793802 tcgtgagtttaactcagttgatatggacaatgcatgataatatgcaagattcggggt 19793858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 38025182 - 38025126
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaat-aaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||| |||| | ||||||| |||||||||||| | ||||||    
T  38025182 tcgtgagcttaactcagttggtatggataatgaataaaaatatgtaaggtccggggt 38025126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 38779980 - 38780024
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||| || ||||||| ||||| |||||||||    
T  38779980 gtgagcttaactcagttggtaggaacaataaataatatatgtaag 38780024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 22664652 - 22664747
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    ||||||||| |||| ||||||||||| ||||||||||| |||||||||||||||||  ||||  ||||||| |||||||||||||| |||| ||||    
T  22664652 ttaaattggttttccaagatttccaaaggcaatgaaggccaatgttcatgtaggtctacccacgtatgaatcttaggacactcatagcacactctc 22664747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 24215013 - 24215095
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactc 463  Q
    |||||||||||||| ||||||||||| |||||||| || |||||||||||||||| | ||||||||||||| |||| ||||||    
T  24215013 ttaaattggctttccaagatttccaaaggcaatgatggccaatgttcatgtaggtggacccatctatgaatcttagaacactc 24215095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 483
Target Start/End: Complemental strand, 9787570 - 9787468
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctctttc 480  Q
    |||||||||| ||||| | ||||||| ||||||| |||||| |||||  ||||||| ||| | |||||||| |||||||||||||| |||| |||| |||    
T  9787570 ttaaattggcgttctaggttttccaaaggcaatgcaggtcagtgttctagtaggtcagcctaactatgaatcttaggacactcataacacactctccttc 9787471  T
Q  481 ccc 483  Q
    |||    
T  9787470 ccc 9787468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 473
Target Start/End: Complemental strand, 18100620 - 18100529
Alignment:
Q  382 taaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacatt 473  Q
    ||||| ||| ||| ||| ||||||| |||||||||||||||||||| || |||||  ||||||||| ||| |||||||||| ||| ||||||    
T  18100620 taaatcggcgttccaaggtttccaaaggcaatgaaggtcaatgttcctgaaggtcttcccatctataaatcttaggacacttataacacatt 18100529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 7550893 - 7550935
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7550893 atcgtgagcttaactcagttgatatgaacaatgcataaaatat 7550935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 51472833 - 51472768
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    ||||||| ||||||||||||||||||||||||||| |   |||||||||||| ||||||||||||||    
T  51472833 tttccaaaggcaatgaaggtcaatgttcatgtagg-cctaccatctatgaatcttaggacactcata 51472768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 41032929 - 41032970
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  41032929 tcgtgagcttaactcagttgatatgaacaatgcataaaatat 41032970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 24281784 - 24281860
Alignment:
Q  400 tttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    ||||||| | ||||||||| ||||||||  | |||||  ||||||||||||| |||||||||||||| |||||||||    
T  24281784 tttccaaagacaatgaaggccaatgttcccgaaggtcttcccatctatgaattttaggacactcataacacattctc 24281860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 43840388 - 43840340
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  43840388 tcgtgagtttaactcagttgatatggacaatgcataaaatatgtaagat 43840340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 2613720 - 2613775
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||| ||||||||    
T  2613720 tcgtgagcttagctcagttggtatggacaatgcataaaatatgtaaggttcggggt 2613775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 23524824 - 23524874
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||||||||||||  |||||||| |||||||||| |||||||||    
T  23524824 gtgagcttaactcagttgattggaacaatgcataaaatatgaaagattcgg 23524874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 32433157 - 32433103
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||| |||||||| |||| ||||||||| |||| ||||||||    
T  32433157 cgtgagcttaactcagtcgatatgaaaaatgcataaaatatataaggttcggggt 32433103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 21985606 - 21985537
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||||||| ||||   |||||| |||||||||||||| |||||||||| ||| |||| |||||    
T  21985606 ggcaatgaaggtcaaggttcccttaggtctgcccatctatgaatcttaggacacttatagcacactctct 21985537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 23045186 - 23045235
Alignment:
Q  263 ttatcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||| ||| |||||||||||| |||| |||||||||    
T  23045186 ttatcgtgagcttaactccgttaatatgaacaatgcataatatatgtaag 23045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 5553058 - 5553018
Alignment:
Q  272 gcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  5553058 gcttaactcagttgatatgaacaatgtataatatatgtaag 5553018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 11410627 - 11410671
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||    
T  11410627 gtgagcttaactcagttggtatgaacaatacataaaatatgtaag 11410671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 15382880 - 15382840
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  15382880 gtgagcttaactcagttgatatgaacaatgtataatatatg 15382840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 51046140 - 51046192
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||| |||||||||||| ||||||||||  |||||||||||||| |||||    
T  51046140 tcgtgagtttaactcagttggtatgaacaatacataaaatatgtaaggttcgg 51046192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 17917199 - 17917148
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggg 319  Q
    ||||| ||| ||||||||||||| |||||| |||||||||||||| ||||||    
T  17917199 gtgagtttagctcagttgatatggacaatgcataaaatatgtaaggttcggg 17917148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 26834518 - 26834561
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgt 309  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||    
T  26834518 tcgtgagcttagctcagttgatatgaacgatgcataaaatatgt 26834561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 308
Target Start/End: Complemental strand, 52262226 - 52262187
Alignment:
Q  269 tgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  52262226 tgagcttaactcagttggtatgaacaatgcataaaatatg 52262187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 3573387 - 3573341
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| || |||||||| |||| |||||||||    
T  3573387 tcgtgagcttaactcagttggtaggaacaatgcataatatatgtaag 3573341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 537
Target Start/End: Complemental strand, 9348676 - 9348622
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||||||||||||||||||||||||    ||||||||||||| | |||||||    
T  9348676 cactagtacaaaaaacacttattaaatcagatattttaaatgggtggctatccac 9348622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 21449570 - 21449660
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||| |||||   ||||||| |||||||||||  || ||||   ||||||| | ||||||||||| |||||||||||||| ||||    
T  21449570 ttaaattggcgttctagtgtttccaaaggcaatgaaggctaaggttcccttaggtcgacacatctatgaatcttaggacactcatagcaca 21449660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 29701383 - 29701337
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||| |||||||||| |||||| |||| |||||||||    
T  29701383 tcgtgagcttaacttagttgatatggacaatgcataatatatgtaag 29701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 45701326 - 45701372
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||| ||| |||||||| ||||||||||| ||||||||||||||    
T  45701326 tcgtgagtttagctcagttggtatgaacaatgcataaaatatgtaag 45701372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 50595947 - 50595897
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||||||||||| |||| ||| ||||||||||| |||||||||| ||||||    
T  50595947 atcgtgagcttagctcaattggtatgaacaatgcataaaatatgcaagatt 50595897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 297
Target Start/End: Complemental strand, 4770689 - 4770660
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatg 297  Q
    ||||||||||||||||||||||||||||||    
T  4770689 gtgagcttaactcagttgatatgaacaatg 4770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 477
Target Start/End: Original strand, 9402127 - 9402184
Alignment:
Q  420 caatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||||| |||  ||||||||||||| || | |||||||||||||| |||||    
T  9402127 caatgttcatgtacgtctacccatctatgaatctttgcacactcatatcacactctct 9402184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 10292935 - 10292980
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||||| | |||||| |||| |||||||||    
T  10292935 cgtgagcttaactcagttgatagggacaatgcataatatatgtaag 10292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 10356249 - 10356204
Alignment:
Q  263 ttatcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||||||||||||||| |||| |||||| |||| |||||    
T  10356249 ttatcgtgagcttaactcagttggtatggacaatgcataatatatg 10356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 14781469 - 14781400
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||| ||| ||||   ||||||  ||||||||||||| |||||||||||||| |||| |||||    
T  14781469 ggcaatgaaggccaaggttctcttaggtcttcccatctatgaatcttaggacactcatagcacactctct 14781400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 27853353 - 27853394
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    |||||||||||||||||||| ||||||||||| |||| ||||    
T  27853353 tcgtgagcttaactcagttggtatgaacaatgcataatatat 27853394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 41182669 - 41182620
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||||||||||||||||||| |||||| |||| |||| || |||||||||    
T  41182669 tcgtgagcttaactcagttggtatgaataatgcataatatgtgtaagatt 41182620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 477
Target Start/End: Original strand, 727930 - 728022
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||| ||  ||||| | ||||||||||||||| ||||   |||||  |||||||||||||  ||||| |||||||| |||| |||||    
T  727930 attggctttccaatgtttcccaaggcaatgaaggtcaaggttcccttaggtttgcccatctatgaaccttagggcactcataacacactctct 728022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 10841900 - 10841944
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||||||||||||||| |||||| |||| |||| ||||    
T  10841900 gtgagcttaactcagttgatatggacaatgcataatatatataag 10841944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 13590108 - 13590160
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||| |||||||| | || |||||| |||||||||||||| |||||    
T  13590108 tcgtgagcttagctcagttggtttggacaatgcataaaatatgtaaggttcgg 13590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 17359577 - 17359657
Alignment:
Q  386 ttggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    |||| |||| ||||||||| | || |||||||||||| |||| ||||| ||  |  |||||||||| ||||||||||||||    
T  17359577 ttggttttccaagatttcccaagggaatgaaggtcaaggttcttgtagatctacttatctatgaatcttaggacactcata 17359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 28832232 - 28832192
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||| ||||||||||| |||| |||||    
T  28832232 gtgagcttaactcagttggtatgaacaatgcataatatatg 28832192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 30003196 - 30003244
Alignment:
Q  263 ttatcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    ||||||||||||||| ||||||| |||| |||||| |||| ||||||||    
T  30003196 ttatcgtgagcttaattcagttggtatggacaatgcataatatatgtaa 30003244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 32962563 - 32962603
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||| ||||||||||| ||||||||||| ||||||||||    
T  32962563 gtgagcataactcagttggtatgaacaatgcataaaatatg 32962603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 48681996 - 48681944
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||| |||||||| ||||||||||| |||| ||||| ||| |||||    
T  48681996 tcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcgg 48681944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 1635455 - 1635545
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||||| ||||||||| | ||||||||||| ||| |||| ||||||||  ||||||||||||| ||||||||||| |||||||    
T  1635455 ttaaattggctttccaagatttcccaaggcaatgaaggccaaggttcctgtaggtctacccatctatgaatcttaggacactcgtatcaca 1635545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 483 - 537
Target Start/End: Original strand, 4058995 - 4059049
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4058995 cactagtacaaaaaacacttattacatctaggattttaaatgggttgttatccac 4059049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 7864129 - 7864071
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccacatga 541  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||| |||||||||||    
T  7864129 cactagtacaaaatatacttattaaatcaaggattttaaatgggttgctatccacatga 7864071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 25934806 - 25934862
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||    
T  25934806 atcgtgagcttagatcagttgatttgaacaatgaataatatatgtaagattcggggt 25934862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 319
Target Start/End: Complemental strand, 9244170 - 9244119
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggg 319  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  9244170 gtgaacttaactcagttggtatgaacaatgaataaaatatgtaaggttcggg 9244119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 381 - 483
Target Start/End: Complemental strand, 6630298 - 6630196
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctctttc 480  Q
    |||||||| | ||| |||||| |||| ||||||||||| |||||||| |||||||| || |||||||||||  ||||| ||| ||| |||| |||| |||    
T  6630298 ttaaattgacgttccaagattcccaaaggcaatgaaggacaatgttcttgtaggtcagctcatctatgaatcataggatactaatagcacactctccttc 6630199  T
Q  481 ccc 483  Q
    |||    
T  6630198 ccc 6630196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 2445297 - 2445352
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||| ||||||||||||||||||||||||||| |||| ||||  ||||||||||||    
T  2445297 tcgtaagcttaactcagttgatatgaacaatgcataatatatacaagattcggggt 2445352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 11177425 - 11177520
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    |||||||||| ||| | | ||||||| ||||||||||| |||||||   ||||||| |||||||| | ||| |||||||||||||| |||| ||||    
T  11177425 ttaaattggcattccaggttttccaaaggcaatgaaggccaatgttgcagtaggtcagcccatctgttaatcttaggacactcataacacactctc 11177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 537
Target Start/End: Original strand, 11764201 - 11764255
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||| ||||||||||||||||| || ||| |||||| |||||||||||||||    
T  11764201 cactagtgcaaaaaacacttattaagtcaaggtttttaagtgggttgttatccac 11764255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 13496114 - 13496156
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  13496114 tcgtgagcttaactcagttgatatgaacaatgcataatatatg 13496156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 14350947 - 14350988
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatat 307  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  14350947 tcgtgagtttaactcagttgatatgaacaatgcataaaatat 14350988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 9444955 - 9445010
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| ||||||||||| |||||||||| ||| ||| ||||    
T  9444955 tcgtgagcttagctcagttggtatgaacaatgtataaaatatgcaaggttcagggt 9445010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 12904379 - 12904328
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    |||||||||| |||||||||||||||||||| |||| ||||| ||| |||||    
T  12904379 cgtgagcttacctcagttgatatgaacaatgcataatatatgcaaggttcgg 12904328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 2108723 - 2108765
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| |||| |||||| ||||||||||    
T  2108723 tcgtgagcttaactcagttggtatggacaatgcataaaatatg 2108765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 6470678 - 6470624
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||||||   |||||| |||| ||||||||| ||||||||    
T  6470678 cgtgagcttaactcagttgataaagacaatgcataatatatgtaagtttcggggt 6470624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 16890511 - 16890465
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||| ||||| |||| |||||| ||||||||||||||    
T  16890511 tcgtgagcttaacttagttggtatggacaatgcataaaatatgtaag 16890465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 477
Target Start/End: Complemental strand, 20005488 - 20005450
Alignment:
Q  439 cccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  20005488 cccatctatgaatcttaggacactcatagcacattctct 20005450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 537
Target Start/End: Original strand, 20980157 - 20980211
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||||||||||||||||||||  || ||||||||| |||||| | |||||||    
T  20980157 cactagtacaaaaaacacttattaggtcaaggattttacatgggtaggtatccac 20980211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 24212599 - 24212557
Alignment:
Q  269 tgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    |||||||||||||||||||||| |||||| |||| ||||||||    
T  24212599 tgagcttaactcagttgatatggacaatgcataatatatgtaa 24212557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 28951397 - 28951439
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| ||||||||||| |||| |||||    
T  28951397 tcgtgagcttaactcagttggtatgaacaatgcataatatatg 28951439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 9311993 - 9311944
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||||||||||||||||||| |||||| |||  |||| ||||||||||||    
T  9311993 tcgtgagcttaactcagttggtatgaataatacataatatatgtaagatt 9311944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 471
Target Start/End: Original strand, 9517239 - 9517300
Alignment:
Q  410 caatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||| ||| ||||   ||||| ||||||||||||||| |||||||||||||| ||||    
T  9517239 caatgaaggacaaggttcccttaggttggcccatctatgaatcttaggacactcatagcaca 9517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 12329275 - 12329320
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||    
T  12329275 cgtgagcttagctcagttgttatgaacaatacataaaatatgtaag 12329320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 18313931 - 18313968
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaa 303  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  18313931 tcgtgagcttaactcagttgataggaacaatgcataaa 18313968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 24623378 - 24623325
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||| ||| ||||||||||||| |||||| |||| ||||||||| ||||||||    
T  24623378 gtgagtttagctcagttgatatggacaatgcataatatatgtaaggttcggggt 24623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 33938742 - 33938689
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggg 319  Q
    ||||||||||| |||||||| ||||||||||| |||| ||||| ||| ||||||    
T  33938742 tcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggg 33938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 5632132 - 5632184
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    |||||||||||||||| ||| || |||||||| |||| |||| ||||||||||    
T  5632132 tcgtgagcttaactcaattggtaggaacaatgtataatatatataagattcgg 5632184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 8629760 - 8629704
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||| ||| |||| |||||| |||| ||||| ||| ||||||||    
T  8629760 atcgtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggt 8629704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 20720844 - 20720788
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggta 322  Q
    ||||||||||| |||||||| |||| |||||| |||| ||||||||| | |||||||    
T  20720844 tcgtgagcttagctcagttgttatggacaatgcataatatatgtaaggtccggggta 20720788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 23009037 - 23008941
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||||||||   ||||| | ||||||||||| ||| ||||   |||||| ||||| ||||||||  ||||||||| ||| |||| |||||    
T  23009037 ttaaattggctttctagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccacctatgaatcataggacactaatagcacactctct 23008941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 23779327 - 23779423
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||||||||   ||||| | ||||||||||| ||| ||||   |||||| ||||| ||||||||  ||||||||| ||| |||| |||||    
T  23779327 ttaaattggctttctagtgtttcccaaggcaatgaaggccaaggttcccttaggtctgcccacctatgaatcataggacactaatagcacactctct 23779423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 26611095 - 26611055
Alignment:
Q  274 ttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    |||| ||||||||||||||||||| |||| |||||||||||    
T  26611095 ttaattcagttgatatgaacaatgcataatatatgtaagat 26611055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 20593125 - 20593067
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccacatga 541  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  20593125 cactagtacaaaaaacacttattaaatctaggattttaaatggcttgctatccacatga 20593067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 468
Target Start/End: Complemental strand, 2167303 - 2167220
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatc 468  Q
    ||||| |||| ||||||||| |  |||||||||||||| |||||||||||||  ||||||||||||| ||||||||||||||||    
T  2167303 attggatttccaagatttcccaaagcaatgaaggtcaaagttcatgtaggtctacccatctatgaatcttaggacactcatatc 2167220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 21302409 - 21302499
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||||||| ||||||| | | |||| |||||| ||| |||| ||||||||  ||||||||||||| |||||||||||||||||||    
T  21302409 ttaaattggctttccaagattttccaaggcagtgaaggccaaggttcttgtaggtcttcccatctatgaatcttaggacactcatatcaca 21302499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 477
Target Start/End: Complemental strand, 19171466 - 19171374
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||| || |||| | | ||||||||||| ||| |||| ||||||||  ||| ||||||||| ||||| ||||||||||||| |||||    
T  19171466 attggctttccaatattttccaaggcaatgaaggccaaggttcttgtaggtctacccttctatgaatcttagggcactcatatcacactctct 19171374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 28244167 - 28244112
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||| | ||||||    
T  28244167 tcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggt 28244112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 39481139 - 39481194
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| |||| |||||| ||||| |||||||||||||||||    
T  39481139 tcgtgagcttagctcagttggtatggacaatgcataaattatgtaagattcggggt 39481194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 537
Target Start/End: Complemental strand, 45914094 - 45914040
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||||||||||||||||||||||||   |||||||||||||| | |||||||    
T  45914094 cactagtacaaaaaacacttattaaatcagagattttaaatgggtggctatccac 45914040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 1707809 - 1707765
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||    
T  1707809 gtgagcttaactcagttggtatgaataatgtataaaatatgtaag 1707765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 477
Target Start/End: Complemental strand, 16245331 - 16245239
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||  || |||||| | | ||||||||| ||| |||| | ||||||  ||||||||||||| |||||||||||||| |||| |||||    
T  16245331 attggcttttcaaaatttcccaagacaatgaaggccaaggttcctttaggtctacccatctatgaatcttaggacactcatagcacactctct 16245239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 466
Target Start/End: Original strand, 17156297 - 17156365
Alignment:
Q  398 gatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    ||||||||| ||||||||||| |||||||| || ||||   ||||||||||||| ||| ||||||||||    
T  17156297 gatttccaaaggcaatgaaggccaatgttcttgaaggttttcccatctatgaatcttaagacactcata 17156365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 18737105 - 18737161
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||| ||||||||| || |||| |||| |||||||||||| |||||    
T  18737105 atcgtgagcttaacttagttgatataaagaatgcataatatatgtaagatttggggt 18737161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 44968179 - 44968223
Alignment:
Q  270 gagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||    
T  44968179 gagcttaactcagttggtatggacaatgcataaaatatgtaagat 44968223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 14827523 - 14827578
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| |||| |||||| |||||||||| ||||| ||||||    
T  14827523 tcgtgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggggt 14827578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 15881088 - 15881143
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| || |||||||||| |||||| || ||||||| ||||||||||||    
T  15881088 tcgtgagcttagctaagttgatatggacaatgcattaaatatgcaagattcggggt 15881143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 537
Target Start/End: Complemental strand, 49093930 - 49093875
Alignment:
Q  482 ccactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    |||||||||||||||||||||||||| ||  ||||||||| ||||  |||||||||    
T  49093930 ccactagtacaaaaaacacttattaagtcagggattttaagtgggcagttatccac 49093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 2563928 - 2563978
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcg 317  Q
    ||||||||||||||||||||||  || ||||||||| ||||||||| ||||    
T  2563928 cgtgagcttaactcagttgataaaaataatgaataatatatgtaaggttcg 2563978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 5941357 - 5941315
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| ||||||||||| |||| |||||    
T  5941357 tcgtgagcttaactcagttggtatgaacaatgcataatatatg 5941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 7827506 - 7827552
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||| ||||||||||||||||| |||||| |||| |||||||||    
T  7827506 tcgtgagtttaactcagttgatatggacaatgcataatatatgtaag 7827552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 7829894 - 7829940
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||| ||||||||||||||||| |||||| |||| |||||||||    
T  7829894 tcgtgagtttaactcagttgatatggacaatgcataatatatgtaag 7829940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 8942015 - 8942057
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| ||||||||||| |||| |||||    
T  8942015 tcgtgagcttaactcagttggtatgaacaatgcataatatatg 8942057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 20370344 - 20370302
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||||||| ||||||||||||| |||||| ||||||||||    
T  20370344 tcgtgagcttagctcagttgatatggacaatgcataaaatatg 20370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 22486682 - 22486736
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||||||||||| || |||||||| |||| ||||| |||||| |||||    
T  22486682 cgtgagcttaactcagttggtaagaacaatgcataatatatgcaagatttggggt 22486736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 477
Target Start/End: Original strand, 41508990 - 41509044
Alignment:
Q  423 tgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||| |||||  ||||||||||||| |||||||||||||| |||| |||||    
T  41508990 tgttcatgcaggtcaacccatctatgaatcttaggacactcataacacactctct 41509044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 47898028 - 47898070
Alignment:
Q  269 tgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    |||||||||||||||||||| |||||| |||||| ||||||||    
T  47898028 tgagcttaactcagttgataagaacaacgaataatatatgtaa 47898070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 49088750 - 49088796
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||| ||| |||||||||||| ||||||| ||||||||||||||    
T  49088750 tcgtgagtttagctcagttgatataaacaatgcataaaatatgtaag 49088796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 51379842 - 51379800
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||    
T  51379842 tcgtgagtttacctcagttgatatgaacaatgcataaaatatg 51379800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 4033426 - 4033467
Alignment:
Q  274 ttaactcagttgatatgaacaatgaataaaatatgtaagatt 315  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  4033426 ttaattcagttgatatgaacaatgcataatatatgtaagatt 4033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 8170344 - 8170401
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcat 465  Q
    ||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||||||    
T  8170344 ggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcat 8170401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 36170153 - 36170116
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaa 303  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  36170153 tcgtgagcttaactcaattgatatgaacaatgcataaa 36170116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 464
Target Start/End: Original strand, 12411596 - 12411652
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactca 464  Q
    ||||||||||| ||| ||||   ||||||||||||||| ||||| ||||||||||||    
T  12411596 ggcaatgaaggccaaggttccattaggtcggcccatctgtgaatcttaggacactca 12411652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 22462311 - 22462355
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaa 311  Q
    |||||||||||||||||||||| | |||||| |||| ||||||||    
T  22462311 cgtgagcttaactcagttgataaggacaatgcataatatatgtaa 22462355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 23332648 - 23332692
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgta 310  Q
    |||||| ||||||| ||||||||||||||||| |||| |||||||    
T  23332648 tcgtgaacttaacttagttgatatgaacaatgcataatatatgta 23332692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 25874128 - 25874184
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataa-aatatgtaagattcggggt 321  Q
    |||||||||||||||||||| |||| |||||| |||| |||||||||| | ||||||    
T  25874128 tcgtgagcttaactcagttggtatggacaatgcataataatatgtaaggtccggggt 25874184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 36918938 - 36918898
Alignment:
Q  263 ttatcgtgagcttaactcagttgatatgaacaatgaataaa 303  Q
    |||| ||||||||||||||||||||| |||||||| |||||    
T  36918938 ttattgtgagcttaactcagttgataggaacaatgcataaa 36918898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 38894042 - 38894090
Alignment:
Q  273 cttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||| |||||||||||||||||||| |||||||||| ||| | ||||||    
T  38894042 cttagctcagttgatatgaacaatgtataaaatatgcaaggtccggggt 38894090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 11631 - 11716
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    ||||||| |||||| ||||||||  | ||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  11631 ttaaatttgctttccaagatttctcaaggcaatgaaggccaaggttcatgtaggtccgcccatctatgaatcttaggacactcata 11716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 9e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 12950662 - 12950566
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||| | ||||||| | ||||||||||| ||| |||| ||||||||  ||||||||||||| |||||||||||||| |||| |||||    
T  12950662 ttaaattggctttccatgatttcctaaggcaatgaaggccaaggttcttgtaggtcttcccatctatgaatcttaggacactcatagcacactctct 12950566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 385 - 477
Target Start/End: Original strand, 15339737 - 15339829
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||| ||||||| | | ||||||||||| ||| |||||||||||||  ||||||||||||| |||||||||| |||||||| |||||    
T  15339737 attggctttccaagattttccaaggcaatgaaggccaaggttcatgtaggtctacccatctatgaatcttaggacacttatatcacactctct 15339829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 17736791 - 17736839
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  17736791 tcgtgagcttagctcagttggtatgaacaatgcataaaatatgtaagat 17736839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 29143374 - 29143470
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||| || |||| | ||||||||||| | ||| ||||   |||||| | |||||||||||| |||||||||||||| |||| |||||    
T  29143374 ttaaattggctttccaatattttctagggcaatgaaagccaaggttcccttaggtctgtccatctatgaatcttaggacactcataacacactctct 29143470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 471
Target Start/End: Complemental strand, 18121868 - 18121805
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    ||||||||||| ||||||||   |||||| |||||||||||||| |||||||||||||| ||||    
T  18121868 ggcaatgaaggccaatgttcccttaggtctgcccatctatgaatcttaggacactcatagcaca 18121805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 476
Target Start/End: Complemental strand, 25885053 - 25884974
Alignment:
Q  397 agatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    |||||||||| |||| ||||||||||||||| || ||||   ||||||||||||| ||||| |||||||| |||| ||||    
T  25885053 agatttccaaaggcagtgaaggtcaatgttcctgaaggttttcccatctatgaatcttagggcactcatagcacactctc 25884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 266 - 309
Target Start/End: Original strand, 35327354 - 35327397
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgt 309  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  35327354 tcgtgagtttaactcagttgatatgaacaatgtataaaatatgt 35327397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 537
Target Start/End: Complemental strand, 19677788 - 19677734
Alignment:
Q  483 cactagtacaaaaaacacttattaaatctaggattttaaatgggttgttatccac 537  Q
    ||||||||||||||||||||||||||||   |||||||||||||| | |||||||    
T  19677788 cactagtacaaaaaacacttattaaatcagagattttaaatgggtggctatccac 19677734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 9964488 - 9964544
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||| |||||||||||||||||||||||   ||| ||||| ||||||||||||    
T  9964488 atcgtgagtttaactcagttgatatgaacaatacgtaatatatgcaagattcggggt 9964544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 17349841 - 17349937
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||| |||||| | ||||||| | || |||||||| |||  ||| |||||||| || |||||| |||| |||||||||||||| |||| |||||    
T  17349841 ttaaattagctttccatgatttcccaaggtaatgaaggccaagattcctgtaggtctgctcatctaggaatcttaggacactcataacacactctct 17349937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 3196558 - 3196609
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcg 317  Q
    ||||||||||  |||||||||||||||||||| |||| ||||||||| ||||    
T  3196558 tcgtgagctttgctcagttgatatgaacaatgcataatatatgtaaggttcg 3196609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 13196698 - 13196753
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||| ||||||||||||| ||||||||||| |||| ||||| ||| ||||||||    
T  13196698 tcgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggttcggggt 13196753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 19159944 - 19159991
Alignment:
Q  271 agcttaactcagttgatatgaacaatgaataaaatatgtaagattcgg 318  Q
    ||||||||||||||||||||||||||| |||| ||||| ||| |||||    
T  19159944 agcttaactcagttgatatgaacaatgcataatatatgcaaggttcgg 19159991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 24305368 - 24305313
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| ||||||| ||||| |||||| |||||||||| ||| ||||||||    
T  24305368 tcgtgagcttagctcagttaatatggacaatgcataaaatatgcaaggttcggggt 24305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 25887504 - 25887453
Alignment:
Q  385 attggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtc 436  Q
    |||||||||  ||||||||||| | ||||||||| |||||||||||||||||    
T  25887504 attggcttttcaagatttccaacgacaatgaaggccaatgttcatgtaggtc 25887453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 15637598 - 15637644
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||||| ||||||| |||||||||||| |||| |||||||||||    
T  15637598 gtgagcttagctcagttaatatgaacaatgtataatatatgtaagat 15637644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 20174230 - 20174176
Alignment:
Q  397 agatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaat 451  Q
    |||||||||| ||||||||||| |||||||  || |||||| |||||||||||||    
T  20174230 agatttccaaaggcaatgaaggccaatgtttctgaaggtcgacccatctatgaat 20174176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 476
Target Start/End: Complemental strand, 28605778 - 28605684
Alignment:
Q  382 taaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    ||||||||| ||| ||||||||||| || |||| |||  ||||||| | ||| || || ||||||||||| |||| ||||||||| |||| ||||    
T  28605778 taaattggcgttccaagatttccaaaggtaatgcaggcaaatgttcctatagatcagctcatctatgaatcttagaacactcatagcacactctc 28605684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 29798580 - 29798534
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||    
T  29798580 tcgtgagcttaactcagttggtatggacaatgcataaaatatttaag 29798534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 42475173 - 42475131
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||    
T  42475173 tcgtgagcttaactcagttggtataaacaatgcataaaatatg 42475131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 12893306 - 12893261
Alignment:
Q  267 cgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||| ||||||||||| |||||||| |||| |||||||||    
T  12893306 cgtgagcttagctcagttgataagaacaatgtataatatatgtaag 12893261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 23011356 - 23011278
Alignment:
Q  397 agatttccaagggcaatgaaggtcaatgttcatgtaggtcgg----cccatctatgaatattaggacactcatatcaca 471  Q
    |||||||||| ||||||||||| |||||||| ||  ||||      ||||||||||||| |||||||||||||||||||    
T  23011356 agatttccaaaggcaatgaaggccaatgttcctgagggtcttaattcccatctatgaatcttaggacactcatatcaca 23011278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 464
Target Start/End: Original strand, 29849849 - 29849902
Alignment:
Q  411 aatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactca 464  Q
    |||||||| ||||||||||| | |||  ||||||||||||| ||||||||||||    
T  29849849 aatgaaggccaatgttcatgaatgtcttcccatctatgaatcttaggacactca 29849902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 31804384 - 31804327
Alignment:
Q  420 caatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||| ||||||||  ||||||||| ||| |||||||||||||| |||| |||||    
T  31804384 caatgttcttgtaggtctacccatctataaattttaggacactcataacacactctct 31804327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 39688253 - 39688302
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||| |||| || ||||||| |||||||||||||||||||| |||||    
T  39688253 atcgtgaacttagcttagttgatttgaacaatgaataaaatatgcaagat 39688302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 10109709 - 10109661
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||||||| |||||||| | || |||||| ||||||||||||||||    
T  10109709 tcgtgagcttagctcagttggtttggacaatgcataaaatatgtaagat 10109661  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 16221406 - 16221354
Alignment:
Q  269 tgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||| ||| |||||||| ||||||||||| |||||||||| ||| ||||||||    
T  16221406 tgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcggggt 16221354  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 17675306 - 17675210
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||| |||||   ||||| | ||||||||||| ||| ||||   |||||| |||||||||||||| ||| |||| ||||| |||| |||||    
T  17675306 ttaaattggcgttctagtgtttcccaaggcaatgaaggccaaggttcccttaggtcagcccatctatgaatcttaagacaatcataccacactctct 17675210  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 19967416 - 19967452
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataa 302  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  19967416 tcgtgagcttagctcagttgatatgaacaatgcataa 19967452  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 27314867 - 27314907
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    |||||||||||||||||| || |||||||| ||||||||||    
T  27314867 gtgagcttaactcagttggtaagaacaatgcataaaatatg 27314907  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 27908746 - 27908706
Alignment:
Q  431 taggtcggcccatctatgaatattaggacactcatatcaca 471  Q
    |||||||| |||||||||||| |||||||||||||| ||||    
T  27908746 taggtcggtccatctatgaatcttaggacactcatagcaca 27908706  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 30412089 - 30412185
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||| |   ||||| | | ||||||||| ||| ||||   |||||| |||||||||||||| |||||| ||||||| |||| |||||    
T  30412089 ttaaattggctttccagtgtttcccaagacaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggatactcataacacactctct 30412185  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 33966318 - 33966370
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcg 317  Q
    ||||||| ||||||||||||| ||||||||||| |||| ||||| ||| ||||    
T  33966318 atcgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggttcg 33966370  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Complemental strand, 37119319 - 37119279
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatg 308  Q
    ||||| |||||||||||||||||||||||| |||| |||||    
T  37119319 gtgagtttaactcagttgatatgaacaatgcataatatatg 37119279  T

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Target: scaffold0024 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 483
Target Start/End: Original strand, 40075 - 40177
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctctttc 480  Q
    |||||||||| |||  || ||||| | |||||||||| ||||||||| || |||||  ||||||||||||| |||||||||||||| ||||||||| |||    
T  40075 ttaaattggcgttcctaggtttccgaaggcaatgaagatcaatgttcctgaaggtcttcccatctatgaatcttaggacactcatagcacattctccttc 40174  T
Q  481 ccc 483  Q
    |||    
T  40175 ccc 40177  T

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Target: scaffold0671 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 900 - 996
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||||||  ||||| |  |||||||||| ||| ||||   |||||| |||||||||||||| ||||||||||||||||||| |||||    
T  900 ttaaattggctttctaatgtttcccaatgcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatatcacactctct 996  T

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Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 42835 - 42750
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcata 466  Q
    |||||||||| ||| ||||||| ||| || |||||||| || ||||| |||||| |  ||||||||||||| ||||||||||||||    
T  42835 ttaaattggcattccaagattttcaaaggaaatgaaggccagtgttcctgtaggacaacccatctatgaatcttaggacactcata 42750  T

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Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 7472 - 7520
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  7472 tcgtgagcttaactcaattggtatgaacaatgcataaaatatgtaagat 7520  T

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Target: scaffold0756 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 4608 - 4539
Alignment:
Q  408 ggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    ||||||||||| ||| ||||   |||||| | |||||||||||| |||||||||||||| ||||||||||    
T  4608 ggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctct 4539  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 161141 - 161194
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||||||||||||| |||| |||||| |||||||||| ||| ||||||||    
T  161141 gtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggt 161194  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 476
Target Start/End: Original strand, 55353 - 55446
Alignment:
Q  383 aaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctc 476  Q
    ||||||||  || ||||||||||| ||||||||||| |||| ||| ||||| ||  ||||||||||||| || ||| ||||||| |||| ||||    
T  55353 aaattggcgatccaagatttccaaaggcaatgaaggccaatattcctgtagatcaacccatctatgaatctttggatactcataacacactctc 55446  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 204588 - 204643
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    |||||||| || ||||||||  |||||||||| |||||||||||||| ||||||||    
T  204588 tcgtgagcatagctcagttggcatgaacaatgcataaaatatgtaaggttcggggt 204643  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 185261 - 185316
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagattcggggt 321  Q
    ||||||||||| |||||||| |||| |||||| |||||||||| ||||| ||||||    
T  185261 tcgtgagcttagctcagttggtatggacaatgcataaaatatgcaagatccggggt 185316  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 118817 - 118863
Alignment:
Q  266 tcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    ||||||||||| |||||||| | ||||||||| ||||||||||||||    
T  118817 tcgtgagcttagctcagttggtttgaacaatgcataaaatatgtaag 118863  T

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Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 177754 - 177710
Alignment:
Q  268 gtgagcttaactcagttgatatgaacaatgaataaaatatgtaag 312  Q
    |||||||||||||| |||| ||| |||||| ||||||||||||||    
T  177754 gtgagcttaactcaattgacatggacaatgcataaaatatgtaag 177710  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 19119 - 19070
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaataaaatatgtaagat 314  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||| |||||    
T  19119 atcgtgagcttaactcagttggtataaacaatatataaaatatgcaagat 19070  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 244476 - 244533
Alignment:
Q  265 atcgtgagcttaactcagttgatatgaacaatgaat-aaaatatgtaagattcggggt 321  Q
    |||||||||||| ||||||||||||| |||||| || |||||||||||| || |||||    
T  244476 atcgtgagcttagctcagttgatatggacaatgcataaaaatatgtaaggtttggggt 244533  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 76875 - 76971
Alignment:
Q  381 ttaaattggctttctaagatttccaagggcaatgaaggtcaatgttcatgtaggtcggcccatctatgaatattaggacactcatatcacattctct 477  Q
    |||||||||||||| |   ||||| | |||||||| | |||| ||||   |||||| |||||||||||||| ||||||||||| || |||| |||||    
T  76875 ttaaattggctttccagtgtttcccaaggcaatgaggctcaaggttcccttaggtctgcccatctatgaatcttaggacactcgtagcacactctct 76971  T

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